3-dehydroquinate synthase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66120 AT5G66120 |
| fragaria_vesca | FvH4_1g11430 |
| malus_domestica | MD15G1242600.v1.1 |
| prunus_persica | Prupe.7G171600_v2.0.a1 |
| pyrus_communis | pycom02g09850 pycom15g21380 |
| rosa_chinensis | RchiOBHm_Chr2g0099011 RchiOBHm_Chr2g0099021 |
| rosa_laevigata | RLG00000016840 |
| rosa_multiflora | Rmu_co8359771.1_g000001 Rmu_sc0000577.1_g000012 Rmu_sc0009422.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00143490 Rroxscaffold_2G00143510 |
| rosa_rugosa | Rorug02G0075600 Rorug02G0075700 |
| rosa_samantha | Rh2AG125000 Rh2AG125100 Rh2BG128200 Rh2BG128300 Rh2CG129200 Rh2CG129300 Rh2DG129400 Rh2DG129500 |
| rosa_wichuraiana | Rw2G009610 Rw2G009620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 229 |
| AatII | GACGTC | 2 cut(s) | 215, 297 |
| Acc36I | ACCTGC | 1 cut(s) | 229 |
| AccII | CGCG | 1 cut(s) | 174 |
| AccIII | TCCGGA | 1 cut(s) | 335 |
| AciI | CCGC | 6 cut(s) | 120, 130, 174, 254, 1126, 1244 |
| AclWI | GGATC | 5 cut(s) | 327, 340, 911, 924, 1145 |
| AcoI | YGGCCR | 3 cut(s) | 12, 84, 1033 |
| AcsI | RAATTY | 2 cut(s) | 869, 1015 |
| AcuI | CTGAAG | 1 cut(s) | 347 |
| AcyI | GRCGYC | 2 cut(s) | 212, 294 |
| AfaI | GTAC | 3 cut(s) | 425, 577, 848 |
| AfeI | AGCGCT | 1 cut(s) | 947 |
| AflIII | ACRYGT | 3 cut(s) | 612, 798, 1116 |
| AgsI | TTSAA | 2 cut(s) | 878, 1186 |
| AjnI | CCWGG | 3 cut(s) | 911, 919, 1341 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1283, 1315 |
| AleI | CACNNNNGTG | 1 cut(s) | 287 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 372, 404 |
| AluBI | AGCT | 8 cut(s) | 59, 91, 111, 315, 1085, 1094, 1163, 1262 |
| AluI | AGCT | 8 cut(s) | 59, 91, 111, 315, 1085, 1094, 1163, 1262 |
| Alw21I | GWGCWC | 1 cut(s) | 113 |
| Alw26I | GTCTC | 1 cut(s) | 40 |
| AlwI | GGATC | 5 cut(s) | 327, 340, 911, 924, 1145 |
| Aor13HI | TCCGGA | 1 cut(s) | 335 |
| Aor51HI | AGCGCT | 1 cut(s) | 947 |
| AoxI | GGCC | 5 cut(s) | 12, 84, 416, 1033, 1338 |
| ApeKI | GCWGC | 4 cut(s) | 626, 629, 632, 1091 |
| ApoI | RAATTY | 2 cut(s) | 869, 1015 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 360 |
| AspLEI | GCGC | 3 cut(s) | 174, 238, 948 |
| AspS9I | GGNCC | 5 cut(s) | 269, 416, 565, 1295, 1339 |
| AsuHPI | GGTGA | 3 cut(s) | 512, 620, 1334 |
| AvaII | GGWCC | 3 cut(s) | 269, 565, 1295 |
| BalI | TGGCCA | 1 cut(s) | 1035 |
| BamHI | GGATCC | 2 cut(s) | 332, 916 |
| BanII | GRGCYC | 2 cut(s) | 113, 155 |
| BbsI | GAAGAC | 2 cut(s) | 58, 126 |
| Bbv12I | GWGCWC | 1 cut(s) | 113 |
| BbvCI | CCTCAGC | 2 cut(s) | 834, 966 |
| BbvI | GCAGC | 4 cut(s) | 613, 616, 619, 1103 |
| BccI | CCATC | 2 cut(s) | 491, 1259 |
| BceAI | ACGGC | 1 cut(s) | 27 |
| BciT130I | CCWGG | 3 cut(s) | 913, 921, 1343 |
| BciVI | GTATCC | 1 cut(s) | 514 |
| BclI | TGATCA | 2 cut(s) | 247, 346 |
| BcoDI | GTCTC | 1 cut(s) | 40 |
| BfoI | RGCGCY | 1 cut(s) | 949 |
| BfuAI | ACCTGC | 1 cut(s) | 229 |
| BfuI | GTATCC | 1 cut(s) | 514 |
| BglII | AGATCT | 1 cut(s) | 1232 |
| BisI | GCNGC | 5 cut(s) | 120, 627, 630, 633, 1092 |
| BlsI | GCNGC | 5 cut(s) | 121, 628, 631, 634, 1093 |
| Bme1390I | CCNGG | 3 cut(s) | 913, 921, 1343 |
| Bme18I | GGWCC | 3 cut(s) | 269, 565, 1295 |
| BmgT120I | GGNCC | 5 cut(s) | 269, 416, 565, 1295, 1339 |
| BmiI | GGNNCC | 6 cut(s) | 154, 270, 279, 334, 918, 1073 |
| BmrFI | CCNGG | 3 cut(s) | 913, 921, 1343 |
| BmrI | ACTGGG | 1 cut(s) | 1059 |
| BmsI | GCATC | 3 cut(s) | 433, 830, 853 |
| BmuI | ACTGGG | 1 cut(s) | 1059 |
| BpiI | GAAGAC | 2 cut(s) | 58, 126 |
| Bpu10I | CCTNAGC | 2 cut(s) | 834, 966 |
| Bsa29I | ATCGAT | 1 cut(s) | 1140 |
| BsaHI | GRCGYC | 2 cut(s) | 212, 294 |
| BsaJI | CCNNGG | 8 cut(s) | 9, 589, 912, 920, 978, 1075, 1129, 1341 |
| BsaWI | WCCGGW | 1 cut(s) | 335 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 585, 615 |
| Bse1I | ACTGG | 4 cut(s) | 567, 718, 822, 1054 |
| BseAI | TCCGGA | 1 cut(s) | 335 |
| BseBI | CCWGG | 3 cut(s) | 913, 921, 1343 |
| BseCI | ATCGAT | 1 cut(s) | 1140 |
| BseDI | CCNNGG | 8 cut(s) | 9, 589, 912, 920, 978, 1075, 1129, 1341 |
| BseGI | GGATG | 3 cut(s) | 868, 988, 1281 |
| BseMII | CTCAG | 3 cut(s) | 825, 957, 992 |
| BseNI | ACTGG | 4 cut(s) | 567, 718, 822, 1054 |
| BseX3I | CGGCCG | 1 cut(s) | 84 |
| BseXI | GCAGC | 4 cut(s) | 613, 616, 619, 1103 |
| Bsh1236I | CGCG | 1 cut(s) | 174 |
| Bsh1285I | CGRYCG | 1 cut(s) | 87 |
| BshFI | GGCC | 5 cut(s) | 14, 86, 418, 1035, 1340 |
| BshVI | ATCGAT | 1 cut(s) | 1140 |
| BsiEI | CGRYCG | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 1 cut(s) | 113 |
| BsiSI | CCGG | 1 cut(s) | 336 |
| BsmAI | GTCTC | 1 cut(s) | 40 |
| BsmBI | CGTCTC | 1 cut(s) | 40 |
| BsnI | GGCC | 5 cut(s) | 14, 86, 418, 1035, 1340 |
| Bsp1286I | GDGCHC | 2 cut(s) | 113, 155 |
| Bsp13I | TCCGGA | 1 cut(s) | 335 |
| Bsp1407I | TGTACA | 1 cut(s) | 575 |
| Bsp143I | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| Bsp19I | CCATGG | 1 cut(s) | 1075 |
| BspACI | CCGC | 6 cut(s) | 120, 130, 174, 254, 1126, 1244 |
| BspANI | GGCC | 5 cut(s) | 14, 86, 418, 1035, 1340 |
| BspCNI | CTCAG | 3 cut(s) | 826, 958, 993 |
| BspDI | ATCGAT | 1 cut(s) | 1140 |
| BspEI | TCCGGA | 1 cut(s) | 335 |
| BspFNI | CGCG | 1 cut(s) | 174 |
| BspLI | GGNNCC | 6 cut(s) | 154, 270, 279, 334, 918, 1073 |
| BspMI | ACCTGC | 1 cut(s) | 229 |
| BspPI | GGATC | 5 cut(s) | 327, 340, 911, 924, 1145 |
| BsrGI | TGTACA | 1 cut(s) | 575 |
| BsrI | ACTGG | 4 cut(s) | 567, 718, 822, 1054 |
| BssECI | CCNNGG | 8 cut(s) | 9, 589, 912, 920, 978, 1075, 1129, 1341 |
| BssMI | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| BssNI | GRCGYC | 2 cut(s) | 212, 294 |
| BssT1I | CCWWGG | 4 cut(s) | 589, 978, 1075, 1129 |
| Bst2UI | CCWGG | 3 cut(s) | 913, 921, 1343 |
| Bst4CI | ACNGT | 4 cut(s) | 412, 676, 1102, 1219 |
| Bst6I | CTCTTC | 2 cut(s) | 43, 102 |
| BstACI | GRCGYC | 2 cut(s) | 212, 294 |
| BstAUI | TGTACA | 1 cut(s) | 575 |
| BstC8I | GCNNGC | 3 cut(s) | 16, 1096, 1161 |
| BstDEI | CTNAG | 4 cut(s) | 834, 966, 1001, 1274 |
| BstDSI | CCRYGG | 2 cut(s) | 9, 1075 |
| BstF5I | GGATG | 3 cut(s) | 868, 988, 1281 |
| BstFNI | CGCG | 1 cut(s) | 174 |
| BstH2I | RGCGCY | 1 cut(s) | 949 |
| BstHHI | GCGC | 3 cut(s) | 174, 238, 948 |
| BstKTI | GATC | 7 cut(s) | 209, 250, 335, 349, 919, 1140, 1235 |
| BstMAI | GTCTC | 1 cut(s) | 40 |
| BstMBI | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| BstMCI | CGRYCG | 1 cut(s) | 87 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 191, 233, 632, 1091 |
| BstNI | CCWGG | 3 cut(s) | 913, 921, 1343 |
| BstNSI | RCATGY | 3 cut(s) | 374, 616, 1120 |
| BstSCI | CCNGG | 3 cut(s) | 911, 919, 1341 |
| BstUI | CGCG | 1 cut(s) | 174 |
| BstV1I | GCAGC | 4 cut(s) | 613, 616, 619, 1103 |
| BstV2I | GAAGAC | 2 cut(s) | 58, 126 |
| BstX2I | RGATCY | 3 cut(s) | 332, 916, 1232 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 289, 731 |
| BstYI | RGATCY | 3 cut(s) | 332, 916, 1232 |
| BstZI | CGGCCG | 1 cut(s) | 84 |
| Bsu15I | ATCGAT | 1 cut(s) | 1140 |
| BsuI | GTATCC | 1 cut(s) | 514 |
| BsuRI | GGCC | 5 cut(s) | 14, 86, 418, 1035, 1340 |
| BsuTUI | ATCGAT | 1 cut(s) | 1140 |
| BtgI | CCRYGG | 2 cut(s) | 9, 1075 |
| BtsCI | GGATG | 3 cut(s) | 868, 988, 1281 |
| BtsI | GCAGTG | 1 cut(s) | 1073 |
| BtsIMutI | CAGTG | 2 cut(s) | 1010, 1073 |
| BveI | ACCTGC | 1 cut(s) | 229 |
| Cac8I | GCNNGC | 3 cut(s) | 16, 1096, 1161 |
| CfoI | GCGC | 3 cut(s) | 174, 238, 948 |
| Cfr13I | GGNCC | 5 cut(s) | 269, 416, 565, 1295, 1339 |
| ClaI | ATCGAT | 1 cut(s) | 1140 |
| Csp6I | GTAC | 3 cut(s) | 424, 576, 847 |
| CviAII | CATG | 8 cut(s) | 371, 377, 517, 613, 951, 1037, 1076, 1117 |
| CviQI | GTAC | 3 cut(s) | 424, 576, 847 |
| DdeI | CTNAG | 4 cut(s) | 834, 966, 1001, 1274 |
| DpnI | GATC | 7 cut(s) | 208, 249, 334, 348, 918, 1139, 1234 |
| DpnII | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| EaeI | YGGCCR | 3 cut(s) | 12, 84, 1033 |
| EagI | CGGCCG | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 2 cut(s) | 43, 102 |
| EarI | CTCTTC | 2 cut(s) | 43, 102 |
| Ecl136II | GAGCTC | 1 cut(s) | 111 |
| EclXI | CGGCCG | 1 cut(s) | 84 |
| Eco130I | CCWWGG | 4 cut(s) | 589, 978, 1075, 1129 |
| Eco24I | GRGCYC | 2 cut(s) | 113, 155 |
| Eco47I | GGWCC | 3 cut(s) | 269, 565, 1295 |
| Eco47III | AGCGCT | 1 cut(s) | 947 |
| Eco52I | CGGCCG | 1 cut(s) | 84 |
| Eco53kI | GAGCTC | 1 cut(s) | 111 |
| Eco57I | CTGAAG | 1 cut(s) | 347 |
| EcoICRI | GAGCTC | 1 cut(s) | 111 |
| EcoO109I | RGGNCCY | 3 cut(s) | 269, 1295, 1339 |
| EcoRI | GAATTC | 1 cut(s) | 869 |
| EcoRII | CCWGG | 3 cut(s) | 911, 919, 1341 |
| EcoT14I | CCWWGG | 4 cut(s) | 589, 978, 1075, 1129 |
| EcoT38I | GRGCYC | 2 cut(s) | 113, 155 |
| ErhI | CCWWGG | 4 cut(s) | 589, 978, 1075, 1129 |
| Esp3I | CGTCTC | 1 cut(s) | 40 |
| FaeI | CATG | 8 cut(s) | 374, 380, 520, 616, 954, 1040, 1079, 1120 |
| FatI | CATG | 8 cut(s) | 370, 376, 516, 612, 950, 1036, 1075, 1116 |
| FauI | CCCGC | 1 cut(s) | 167 |
| FbaI | TGATCA | 2 cut(s) | 247, 346 |
| Fnu4HI | GCNGC | 5 cut(s) | 120, 627, 630, 633, 1092 |
| FokI | GGATG | 3 cut(s) | 875, 995, 1268 |
| FriOI | GRGCYC | 2 cut(s) | 113, 155 |
| Fsp4HI | GCNGC | 5 cut(s) | 120, 627, 630, 633, 1092 |
| GlaI | GCGC | 3 cut(s) | 173, 237, 947 |
| GluI | GCNGC | 5 cut(s) | 120, 627, 630, 633, 1092 |
| HaeII | RGCGCY | 1 cut(s) | 949 |
| HaeIII | GGCC | 5 cut(s) | 14, 86, 418, 1035, 1340 |
| HapII | CCGG | 1 cut(s) | 336 |
| HhaI | GCGC | 3 cut(s) | 174, 238, 948 |
| Hin1I | GRCGYC | 2 cut(s) | 212, 294 |
| Hin1II | CATG | 8 cut(s) | 374, 380, 520, 616, 954, 1040, 1079, 1120 |
| Hin6I | GCGC | 3 cut(s) | 172, 236, 946 |
| HinP1I | GCGC | 3 cut(s) | 172, 236, 946 |
| HincII | GTYRAC | 2 cut(s) | 165, 1114 |
| HindII | GTYRAC | 2 cut(s) | 165, 1114 |
| HindIII | AAGCTT | 1 cut(s) | 57 |
| HinfI | GANTC | 7 cut(s) | 166, 196, 554, 664, 692, 1145, 1208 |
| HpaII | CCGG | 1 cut(s) | 336 |
| HphI | GGTGA | 3 cut(s) | 512, 620, 1334 |
| Hpy166II | GTNNAC | 4 cut(s) | 165, 292, 998, 1114 |
| Hpy188I | TCNGA | 7 cut(s) | 108, 312, 332, 366, 663, 1232, 1290 |
| Hpy188III | TCNNGA | 5 cut(s) | 336, 344, 558, 1205, 1374 |
| Hpy8I | GTNNAC | 4 cut(s) | 165, 292, 998, 1114 |
| Hpy99I | CGWCG | 3 cut(s) | 214, 217, 299 |
| HpyAV | CCTTC | 5 cut(s) | 379, 650, 982, 1249, 1295 |
| HpyCH4III | ACNGT | 4 cut(s) | 412, 676, 1102, 1219 |
| HpyCH4IV | ACGT | 3 cut(s) | 212, 294, 800 |
| HpyCH4V | TGCA | 4 cut(s) | 866, 1040, 1091, 1368 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 191, 233, 632, 1091 |
| HpyF3I | CTNAG | 4 cut(s) | 834, 966, 1001, 1274 |
| HpySE526I | ACGT | 3 cut(s) | 212, 294, 800 |
| Hsp92I | GRCGYC | 2 cut(s) | 212, 294 |
| Hsp92II | CATG | 8 cut(s) | 374, 380, 520, 616, 954, 1040, 1079, 1120 |
| HspAI | GCGC | 3 cut(s) | 172, 236, 946 |
| Kpn2I | TCCGGA | 1 cut(s) | 335 |
| Ksp22I | TGATCA | 2 cut(s) | 247, 346 |
| Kzo9I | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| LmnI | GCTCC | 4 cut(s) | 158, 283, 312, 1077 |
| Lsp1109I | GCAGC | 4 cut(s) | 613, 616, 619, 1103 |
| LweI | GCATC | 3 cut(s) | 433, 830, 853 |
| MaeII | ACGT | 3 cut(s) | 212, 294, 800 |
| MaeIII | GTNAC | 5 cut(s) | 397, 608, 1188, 1213, 1269 |
| MalI | GATC | 7 cut(s) | 208, 249, 334, 348, 918, 1139, 1234 |
| MboI | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| MboII | GAAGA | 8 cut(s) | 30, 58, 89, 126, 353, 582, 687, 748 |
| MfeI | CAATTG | 1 cut(s) | 1306 |
| MflI | RGATCY | 3 cut(s) | 332, 916, 1232 |
| MhlI | GDGCHC | 2 cut(s) | 113, 155 |
| MlsI | TGGCCA | 1 cut(s) | 1035 |
| MluCI | AATT | 5 cut(s) | 321, 652, 869, 1015, 1306 |
| MluNI | TGGCCA | 1 cut(s) | 1035 |
| MlyI | GAGTC | 3 cut(s) | 160, 205, 563 |
| MmeI | TCCRAC | 2 cut(s) | 692, 1115 |
| Mox20I | TGGCCA | 1 cut(s) | 1035 |
| MroI | TCCGGA | 1 cut(s) | 335 |
| MroXI | GAANNNNTTC | 1 cut(s) | 360 |
| MscI | TGGCCA | 1 cut(s) | 1035 |
| MseI | TTAA | 2 cut(s) | 651, 905 |
| MslI | CAYNNNNRTG | 3 cut(s) | 287, 375, 1103 |
| Msp20I | TGGCCA | 1 cut(s) | 1035 |
| MspA1I | CMGCKG | 1 cut(s) | 1094 |
| MspI | CCGG | 1 cut(s) | 336 |
| MspR9I | CCNGG | 3 cut(s) | 913, 921, 1343 |
| MunI | CAATTG | 1 cut(s) | 1306 |
| MvaI | CCWGG | 3 cut(s) | 913, 921, 1343 |
| MvnI | CGCG | 1 cut(s) | 174 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 191, 233, 632, 1091 |
| NcoI | CCATGG | 1 cut(s) | 1075 |
| NdeII | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| NlaIII | CATG | 8 cut(s) | 374, 380, 520, 616, 954, 1040, 1079, 1120 |
| NlaIV | GGNNCC | 6 cut(s) | 154, 270, 279, 334, 918, 1073 |
| NmeAIII | GCCGAG | 4 cut(s) | 62, 112, 148, 161 |
| NmuCI | GTSAC | 3 cut(s) | 397, 608, 1213 |
| NspI | RCATGY | 3 cut(s) | 374, 616, 1120 |
| OliI | CACNNNNGTG | 1 cut(s) | 287 |
| PaqCI | CACCTGC | 1 cut(s) | 229 |
| PciI | ACATGT | 2 cut(s) | 612, 1116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 360 |
| PfeI | GAWTC | 4 cut(s) | 664, 692, 1145, 1208 |
| PkrI | GCNGC | 5 cut(s) | 121, 628, 631, 634, 1093 |
| PleI | GAGTC | 3 cut(s) | 160, 204, 562 |
| PpsI | GAGTC | 3 cut(s) | 160, 204, 562 |
| PpuMI | RGGWCCY | 2 cut(s) | 269, 1295 |
| PscI | ACATGT | 2 cut(s) | 612, 1116 |
| Psp124BI | GAGCTC | 1 cut(s) | 113 |
| Psp5II | RGGWCCY | 2 cut(s) | 269, 1295 |
| Psp6I | CCWGG | 3 cut(s) | 911, 919, 1341 |
| PspGI | CCWGG | 3 cut(s) | 911, 919, 1341 |
| PspN4I | GGNNCC | 6 cut(s) | 154, 270, 279, 334, 918, 1073 |
| PspPI | GGNCC | 5 cut(s) | 269, 416, 565, 1295, 1339 |
| PspPPI | RGGWCCY | 2 cut(s) | 269, 1295 |
| PsuI | RGATCY | 3 cut(s) | 332, 916, 1232 |
| PvuII | CAGCTG | 1 cut(s) | 1094 |
| RsaI | GTAC | 3 cut(s) | 425, 577, 848 |
| RsaNI | GTAC | 3 cut(s) | 424, 576, 847 |
| RseI | CAYNNNNRTG | 3 cut(s) | 287, 375, 1103 |
| SacI | GAGCTC | 1 cut(s) | 113 |
| SaqAI | TTAA | 2 cut(s) | 651, 905 |
| SatI | GCNGC | 5 cut(s) | 120, 627, 630, 633, 1092 |
| Sau3AI | GATC | 7 cut(s) | 206, 247, 332, 346, 916, 1137, 1232 |
| Sau96I | GGNCC | 5 cut(s) | 269, 416, 565, 1295, 1339 |
| SchI | GAGTC | 3 cut(s) | 160, 205, 563 |
| ScrFI | CCNGG | 3 cut(s) | 913, 921, 1343 |
| SduI | GDGCHC | 2 cut(s) | 113, 155 |
| SfaNI | GCATC | 3 cut(s) | 433, 830, 853 |
| SinI | GGWCC | 3 cut(s) | 269, 565, 1295 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 287, 375, 1103 |
| Sse9I | AATT | 5 cut(s) | 321, 652, 869, 1015, 1306 |
| SsiI | CCGC | 6 cut(s) | 120, 130, 174, 254, 1126, 1244 |
| SspI | AATATT | 1 cut(s) | 895 |
| SstI | GAGCTC | 1 cut(s) | 113 |
| StyD4I | CCNGG | 3 cut(s) | 911, 919, 1341 |
| StyI | CCWWGG | 4 cut(s) | 589, 978, 1075, 1129 |
| TaaI | ACNGT | 4 cut(s) | 412, 676, 1102, 1219 |
| TaiI | ACGT | 3 cut(s) | 215, 297, 803 |
| TaqI | TCGA | 5 cut(s) | 199, 209, 215, 297, 1140 |
| TaqII | GACCGA | 1 cut(s) | 582 |
| TasI | AATT | 5 cut(s) | 321, 652, 869, 1015, 1306 |
| TatI | WGTACW | 2 cut(s) | 423, 575 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TfiI | GAWTC | 4 cut(s) | 664, 692, 1145, 1208 |
| Tru1I | TTAA | 2 cut(s) | 651, 905 |
| Tru9I | TTAA | 2 cut(s) | 651, 905 |
| TscAI | CASTG | 2 cut(s) | 1017, 1073 |
| TseFI | GTSAC | 3 cut(s) | 397, 608, 1213 |
| TseI | GCWGC | 4 cut(s) | 626, 629, 632, 1091 |
| Tsp45I | GTSAC | 3 cut(s) | 397, 608, 1213 |
| TspDTI | ATGAA | 4 cut(s) | 365, 545, 646, 1158 |
| TspGWI | ACGGA | 3 cut(s) | 22, 145, 1201 |
| TspRI | CASTG | 2 cut(s) | 1017, 1073 |
| VpaK11BI | GGWCC | 3 cut(s) | 269, 565, 1295 |
| XapI | RAATTY | 2 cut(s) | 869, 1015 |
| XceI | RCATGY | 3 cut(s) | 374, 616, 1120 |
| XmnI | GAANNNNTTC | 1 cut(s) | 360 |
| ZraI | GACGTC | 2 cut(s) | 213, 295 |