Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006294

Physical Location & Seq

Genomic Coordinates Reverse (-)

5990095 .. 5992973

Gene Structure 2879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0075700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGGCTGATCCTTCTTCATGTGCTCATTGCAGCATCTATGAGAGGTTGGACTGGACTGAGTCTGTTCACCGTGATGAGATCTTGGCTGTGCTTTCGAGGGTCGAAAGCAACGGCAAAGGGTTTGTCCAACCCCAGCAACTTGTTGCTGAGTTTGAAGCAATCCCTGAAGCATTTGGAGAAGTTTCAAAGAACATTCAGGAAGCTGTTGTTCTATCTCCATACCTAGCCCTCGCTCTTCGTCCAAGGCCCGGTGTTTGGGAACACATCCTAATCAACATGAAGACACTCGAGGTTGAGGAGTTGCCTGTGGCTGAGTACTTGAAGATGAAGGAGGAACTCGTCGATGGAAGTGCCAATGGAGGCTTTGTGCTAGAGTTGGACTTTGAGCCATTCAATGCTTCAGTTCCCAAACCAACTCTTTCCAAGTCCATTGGAAATGGCCTTGAGTACCTCAACCGCCACCTCTCTGCAAAGCTATTCACTGAGCGGGAGAGCATGCATCCAGTGTTGCTCGAGTTTCTCCGCCTTCACACCCATGACGGCAAGAACCTGATGCTGAATGACAACATTGAGGATGTGGAAGAACTCCAAGATGTTCTCAAGGAGGTGGAGGAGTATCTCTCTTCACTAGCCCTCGGAACTCCATATGAAGCTTTCGAGCATAAGTTGCAAGATCTGGGCTTGGAGAGAGGTTGGGGAAACAATGCTGAGCTTGTGCTTGAAACGATCCGGCTGCTCTTGGACCTTCTTGAGGCACCAGATGCTTGCAATCTCGAGAAATTCATCAGCAAGATCCCCTTGGTCTTTAATGTTGTGATCATGTCTCCCCATGGTTATTTTGCACAAGACAATGTCTTGGGATATCCTGACACTGGTGGCCAGGTTGTTTATATCTTGGATCAAGTGCGTGCTTTGGAGAATGAGATGCTTAAGCGTATCAAGGAACAAGGGCTTGATATCACCCCTCGCATTCTTATTGTTACAAGGCTCCTTCCTGATGCTGTCGGGACTACTTGCGGTCAGCGTCTTGAGAGGGTGTATGGAACTGAATATTCAGATATTATCCGTGTTCCTTTCAGAACAGAGAAGGGAATTGTCCGTAGATGGATCTCAAGATTTGAAGTCTGGCCATATCTAGAGACTTACACTGAGGATGTTGCAACAGAACTTCTCAAGGAGTTCCAGGGCAAGCCTGATCTTATCATCGGAAACTACAGTGATGGAAACATTGTGGCCTCATTGTTGGCACACAAATTTGATGTTACTCAGTGCACCATTGCTCATGCCTTGGAGAAGACAAAGTACCCTGATTCTGACTTGTACTGGAAGAAACTTGAGGACAAGTACCACTTCTCTTGCCAGTTCACAGCTGATCTCATTGCCATGAACCAGACCGATTTCATTATCACAAGTACCTTCCAAGAGATTGCTGGAAGCAAAGACACTGTTGGTCAATATGAGACTCACATTGCCTTCACAATGCCTGGCCTCTACCGCGTTGTCAATGGTATAGATTGCTTTGATCCCAAGTTCAACATTGTTTCCCCAGGAGCTGACATGGACATTTACTTCCCGTACACTGAGAAGGAAAGACGGTTGACATCATTCCACCCCGAAATCGAAGAGCTCATCTACAGCCAAGTTGAGAATAAGGAACACTTGTGTGTCTTGAATGACAGGAACAAGCCTATCATCTTCACAATGGCAAGGCTTGACCGTGTGAAGAACATCACCGGGCTTGTGGAATGGTATGGCAAGAATGCCAAGCTTAGGGAGTTGGTTAACCTTGTGGTTGTGGCTGGGGATCGGCGAAAGGAGTCCAAGGACAACGAGGAGAAGGCTGAGATGAAGAAGATGTACGAGCTCATTGACACCTACAAGTTGAATGGACAGTTCAGATGGATTTCTTCTCAGATGAACCGCGTGAGGAACGGTGAGCTCTACCGCTATATTGCTGACACTAAAGGAGCTTTTGTGCAACCTGCTGTCTATGAAGCCTTTGGCTTGACTGTTGTGGAGGCCATGACTTGTGGATTGCCTACCTTTGCTACTTGCAAAGGCGGCCCGGCTGAGATTATTGTGAATGGAAAATCCGGCTACCACATTGATCCATATCATGGTGACAAAGCTGCTGAGATCCTTGTTGACTTCTTTCAGAAGTGCAAGGTTGATCCTTCTCACTGGGACAAGATCTCCCAAGGAGGCTTGAAGCGTATCGAAGAGAAGTATACTTGGCAGATTTACTCTGAGAGGCTGCTGACCCTGACCGGAGTTTATGGCTTCTGGAAGCATGTTTCTAACCTTGACGAGAAGCGTCGCTACATAGAAATGTTGTATGCCCTCGGGTATAAGAAATCGGTTGAGTCTGTTCCTCTTGCTGAAGAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003856 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019632 GO:0019752 GO:0032787 GO:0033587 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHQ_synthase

Protein Analysis

796

Amino Acids

91.02

Weight (kDa)

5.15

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	11 - 111	6.9e-28	Sucrose synthase N-terminal
SUS_EPBD	PF24862	146 - 234	3.9e-30	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	257 - 545	1.8e-166	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	559 - 714	1.6e-25	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	563 - 715	7.1e-11	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66120 AT5G66120
fragaria_vesca	FvH4_1g11430
malus_domestica	MD15G1242600.v1.1
prunus_persica	Prupe.7G171600_v2.0.a1
pyrus_communis	pycom02g09850 pycom15g21380
rosa_chinensis	RchiOBHm_Chr2g0099011 RchiOBHm_Chr2g0099021
rosa_laevigata	RLG00000016840
rosa_multiflora	Rmu_co8359771.1_g000001 Rmu_sc0000577.1_g000012 Rmu_sc0009422.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143490 Rroxscaffold_2G00143510
rosa_rugosa	Rorug02G0075600 Rorug02G0075700
rosa_samantha	Rh2AG125000 Rh2AG125100 Rh2BG128200 Rh2BG128300 Rh2CG129200 Rh2CG129300 Rh2DG129400 Rh2DG129500
rosa_wichuraiana	Rw2G009610 Rw2G009620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1990
AccB1I	GGYRCC	1 cut(s)	754
AccB7I	CCANNNNNTGG	1 cut(s)	2117
AccBSI	CCGCTC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	2228
AccII	CGCG	2 cut(s)	1497, 1923
AciI	CCGC	8 cut(s)	457, 487, 523, 1017, 1495, 1921, 1945, 2061
AcoI	YGGCCR	2 cut(s)	877, 1127
AcsI	RAATTY	2 cut(s)	779, 1253
AcuI	CTGAAG	2 cut(s)	186, 384
AfaI	GTAC	8 cut(s)	317, 449, 1304, 1322, 1346, 1414, 1577, 1859
AfiI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1770, 2117
AflII	CTTAAG	1 cut(s)	929
AjnI	CCWGG	4 cut(s)	879, 1182, 1483, 1546
AleI	CACNNNNGTG	1 cut(s)	1662
Alw21I	GWGCWC	5 cut(s)	25, 1274, 1629, 1866, 1941
Alw26I	GTCTC	3 cut(s)	828, 1133, 1454
Alw44I	GTGCAC	1 cut(s)	1270
AlwNI	CAGNNNCTG	1 cut(s)	1553
Ama87I	CYCGRG	4 cut(s)	287, 512, 773, 2342
AoxI	GGCC	8 cut(s)	245, 439, 877, 1127, 1233, 1486, 2019, 2062
ApaLI	GTGCAC	1 cut(s)	1270
ApeKI	GCWGC	4 cut(s)	30, 733, 2129, 2254
ApoI	RAATTY	2 cut(s)	779, 1253
ArsI	GACNNNNNNTTYG	2 cut(s)	108, 140
AspS9I	GGNCC	3 cut(s)	246, 742, 2063
AsuC2I	CCSGG	3 cut(s)	249, 1735, 2066
AsuHPI	GGTGA	5 cut(s)	59, 952, 1723, 1946, 2132
AvaI	CYCGRG	4 cut(s)	287, 512, 773, 2342
AvaII	GGWCC	1 cut(s)	742
BaeGI	GKGCMC	1 cut(s)	1274
BalI	TGGCCA	2 cut(s)	879, 1129
BanI	GGYRCC	1 cut(s)	754
BanII	GRGCYC	3 cut(s)	1629, 1866, 1941
BarI	GAAGNNNNNNTAC	6 cut(s)	1286, 1318, 1841, 1873, 2303, 2335
BbsI	GAAGAC	2 cut(s)	287, 1301
Bbv12I	GWGCWC	5 cut(s)	25, 1274, 1629, 1866, 1941
BbvI	GCAGC	4 cut(s)	42, 720, 2116, 2241
BccI	CCATC	4 cut(s)	338, 1098, 1214, 1893
BceAI	ACGGC	2 cut(s)	127, 556
BcgI	CGANNNNNNTGC	4 cut(s)	332, 366, 715, 749
BciT130I	CCWGG	4 cut(s)	881, 1184, 1485, 1548
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	3 cut(s)	249, 1735, 2066
BcoDI	GTCTC	3 cut(s)	828, 1133, 1454
BfaI	CTAG	4 cut(s)	224, 371, 629, 1136
BfmI	CTRYAG	2 cut(s)	1213, 1633
BfrI	CTTAAG	1 cut(s)	929
BfuAI	ACCTGC	1 cut(s)	1990
BglII	AGATCT	3 cut(s)	78, 673, 2190
BisI	GCNGC	5 cut(s)	31, 734, 2062, 2130, 2255
BlpI	GCTNAGC	1 cut(s)	708
BlsI	GCNGC	5 cut(s)	32, 735, 2063, 2131, 2256
BmcAI	AGTACT	1 cut(s)	317
Bme1390I	CCNGG	7 cut(s)	249, 881, 1184, 1485, 1548, 1735, 2066
Bme18I	GGWCC	1 cut(s)	742
BmeT110I	CYCGRG	4 cut(s)	287, 512, 773, 2342
BmgT120I	GGNCC	3 cut(s)	246, 742, 2063
BmiI	GGNNCC	2 cut(s)	756, 989
BmrFI	CCNGG	7 cut(s)	249, 881, 1184, 1485, 1548, 1735, 2066
BmrI	ACTGGG	1 cut(s)	2191
BmsI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
BmuI	ACTGGG	1 cut(s)	2191
BpiI	GAAGAC	2 cut(s)	287, 1301
BplI	GAGNNNNNCTC	2 cut(s)	605, 637
Bpu10I	CCTNAGC	1 cut(s)	1769
Bpu1102I	GCTNAGC	1 cut(s)	708
BpuEI	CTTGAG	7 cut(s)	464, 584, 770, 1049, 1096, 1157, 1355
BpuMI	CCSGG	3 cut(s)	249, 1735, 2066
BsaBI	GATNNNNATC	1 cut(s)	2112
BsaWI	WCCGGW	1 cut(s)	2267
BsaXI	ACNNNNNCTCC	6 cut(s)	351, 381, 1959, 1989, 2177, 2207
Bsc4I	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1770, 2117
Bse1I	ACTGG	6 cut(s)	56, 503, 877, 1328, 1360, 2186
Bse3DI	GCAATG	4 cut(s)	25, 1275, 1377, 1467
Bse8I	GATNNNNATC	1 cut(s)	2112
BseBI	CCWGG	4 cut(s)	881, 1184, 1485, 1548
BseGI	GGATG	4 cut(s)	264, 499, 580, 1159
BseJI	GATNNNNATC	1 cut(s)	2112
BseLI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1770, 2117
BseMI	GCAATG	4 cut(s)	25, 1275, 1377, 1467
BseNI	ACTGG	6 cut(s)	56, 503, 877, 1328, 1360, 2186
BseRI	GAGGAG	3 cut(s)	311, 626, 1847
BseSI	GKGCMC	1 cut(s)	1274
BseXI	GCAGC	4 cut(s)	42, 720, 2116, 2241
BseYI	CCCAGC	2 cut(s)	132, 1799
Bsh1236I	CGCG	2 cut(s)	1497, 1923
BshFI	GGCC	8 cut(s)	247, 441, 879, 1129, 1235, 1488, 2021, 2064
BshNI	GGYRCC	1 cut(s)	754
BsiHKAI	GWGCWC	5 cut(s)	25, 1274, 1629, 1866, 1941
BsiHKCI	CYCGRG	4 cut(s)	287, 512, 773, 2342
BsiSI	CCGG	6 cut(s)	249, 730, 1734, 2066, 2094, 2268
BslFI	GGGAC	2 cut(s)	1021, 2198
BslI	CCNNNNNNNGG	6 cut(s)	248, 255, 751, 872, 1770, 2117
BsmAI	GTCTC	3 cut(s)	828, 1133, 1454
BsmFI	GGGAC	2 cut(s)	1021, 2198
BsmI	GAATGC	2 cut(s)	969, 1765
BsnI	GGCC	8 cut(s)	247, 441, 879, 1129, 1235, 1488, 2021, 2064
BsoBI	CYCGRG	4 cut(s)	287, 512, 773, 2342
Bsp1286I	GDGCHC	5 cut(s)	25, 1274, 1629, 1866, 1941
Bsp1720I	GCTNAGC	1 cut(s)	708
Bsp19I	CCATGG	1 cut(s)	829
BspACI	CCGC	8 cut(s)	457, 487, 523, 1017, 1495, 1921, 1945, 2061
BspANI	GGCC	8 cut(s)	247, 441, 879, 1129, 1235, 1488, 2021, 2064
BspFNI	CGCG	2 cut(s)	1497, 1923
BspLI	GGNNCC	2 cut(s)	756, 989
BspMI	ACCTGC	1 cut(s)	1990
BspQI	GCTCTTC	2 cut(s)	240, 1617
BspT107I	GGYRCC	1 cut(s)	754
BspTI	CTTAAG	1 cut(s)	929
BsrBI	CCGCTC	1 cut(s)	487
BsrDI	GCAATG	4 cut(s)	25, 1275, 1377, 1467
BsrI	ACTGG	6 cut(s)	56, 503, 877, 1328, 1360, 2186
BssNAI	GTATAC	1 cut(s)	2229
BssT1I	CCWWGG	6 cut(s)	242, 798, 829, 1287, 1821, 2197
Bst1107I	GTATAC	1 cut(s)	2229
Bst2UI	CCWGG	4 cut(s)	881, 1184, 1485, 1548
Bst4CI	ACNGT	8 cut(s)	71, 1217, 1447, 1596, 1718, 1893, 1934, 2011
Bst6I	CTCTTC	5 cut(s)	240, 628, 1617, 2214, 2379
BstAFI	CTTAAG	1 cut(s)	929
BstAPI	GCANNNNNTGC	2 cut(s)	667, 761
BstC8I	GCNNGC	4 cut(s)	497, 766, 909, 1190
BstDSI	CCRYGG	1 cut(s)	829
BstENI	CCTNNNNNAGG	1 cut(s)	749
BstF5I	GGATG	4 cut(s)	264, 499, 580, 1159
BstFNI	CGCG	2 cut(s)	1497, 1923
BstMAI	GTCTC	3 cut(s)	828, 1133, 1454
BstMWI	GCNNNNNNNGC	4 cut(s)	667, 761, 1494, 2061
BstNI	CCWGG	4 cut(s)	881, 1184, 1485, 1548
BstNSI	RCATGY	2 cut(s)	499, 2294
BstSCI	CCNGG	7 cut(s)	247, 879, 1182, 1483, 1546, 1733, 2064
BstSFI	CTRYAG	2 cut(s)	1213, 1633
BstSLI	GKGCMC	1 cut(s)	1274
BstUI	CGCG	2 cut(s)	1497, 1923
BstV1I	GCAGC	4 cut(s)	42, 720, 2116, 2241
BstV2I	GAAGAC	2 cut(s)	287, 1301
BstX2I	RGATCY	6 cut(s)	78, 673, 792, 1107, 2136, 2190
BstYI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2136, 2190
BstZ17I	GTATAC	1 cut(s)	2229
BsuRI	GGCC	8 cut(s)	247, 441, 879, 1129, 1235, 1488, 2021, 2064
BtgI	CCRYGG	1 cut(s)	829
BtsCI	GGATG	4 cut(s)	264, 499, 580, 1159
BtsIMutI	CAGTG	9 cut(s)	480, 510, 870, 1146, 1222, 1274, 1443, 1578, 2179
BveI	ACCTGC	1 cut(s)	1990
Cac8I	GCNNGC	4 cut(s)	497, 766, 909, 1190
CaiI	CAGNNNCTG	1 cut(s)	1553
Cfr13I	GGNCC	3 cut(s)	246, 742, 2063
CseI	GACGC	2 cut(s)	1013, 2303
Csp6I	GTAC	8 cut(s)	316, 448, 1303, 1321, 1345, 1413, 1576, 1858
CspCI	CAANNNNNGTGG	2 cut(s)	1337, 1372
CviQI	GTAC	8 cut(s)	316, 448, 1303, 1321, 1345, 1413, 1576, 1858
EaeI	YGGCCR	2 cut(s)	877, 1127
Eam1104I	CTCTTC	5 cut(s)	240, 628, 1617, 2214, 2379
EarI	CTCTTC	5 cut(s)	240, 628, 1617, 2214, 2379
EciI	GGCGGA	1 cut(s)	512
Ecl136II	GAGCTC	3 cut(s)	1627, 1864, 1939
Eco130I	CCWWGG	6 cut(s)	242, 798, 829, 1287, 1821, 2197
Eco24I	GRGCYC	3 cut(s)	1629, 1866, 1941
Eco32I	GATATC	2 cut(s)	863, 958
Eco47I	GGWCC	1 cut(s)	742
Eco53kI	GAGCTC	3 cut(s)	1627, 1864, 1939
Eco57I	CTGAAG	2 cut(s)	186, 384
Eco88I	CYCGRG	4 cut(s)	287, 512, 773, 2342
EcoICRI	GAGCTC	3 cut(s)	1627, 1864, 1939
EcoNI	CCTNNNNNAGG	1 cut(s)	749
EcoRII	CCWGG	4 cut(s)	879, 1182, 1483, 1546
EcoRV	GATATC	2 cut(s)	863, 958
EcoT14I	CCWWGG	6 cut(s)	242, 798, 829, 1287, 1821, 2197
EcoT22I	ATGCAT	1 cut(s)	501
EcoT38I	GRGCYC	3 cut(s)	1629, 1866, 1941
ErhI	CCWWGG	6 cut(s)	242, 798, 829, 1287, 1821, 2197
FalI	AAGNNNNNCTT	6 cut(s)	782, 814, 1334, 1366, 1643, 1675
FaqI	GGGAC	2 cut(s)	1021, 2198
FauI	CCCGC	1 cut(s)	480
FauNDI	CATATG	1 cut(s)	646
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	2228
Fnu4HI	GCNGC	5 cut(s)	31, 734, 2062, 2130, 2255
FokI	GGATG	4 cut(s)	251, 486, 587, 1166
FriOI	GRGCYC	3 cut(s)	1629, 1866, 1941
Fsp4HI	GCNGC	5 cut(s)	31, 734, 2062, 2130, 2255
FspBI	CTAG	4 cut(s)	224, 371, 629, 1136
GluI	GCNGC	5 cut(s)	31, 734, 2062, 2130, 2255
GsaI	CCCAGC	2 cut(s)	136, 1803
HaeIII	GGCC	8 cut(s)	247, 441, 879, 1129, 1235, 1488, 2021, 2064
HapII	CCGG	6 cut(s)	249, 730, 1734, 2066, 2094, 2268
HgaI	GACGC	2 cut(s)	1013, 2303
HincII	GTYRAC	3 cut(s)	1599, 1783, 2146
HindII	GTYRAC	3 cut(s)	1599, 1783, 2146
HindIII	AAGCTT	2 cut(s)	651, 1766
HinfI	GANTC	5 cut(s)	59, 1310, 1462, 1817, 2363
HpaI	GTTAAC	1 cut(s)	1783
HpaII	CCGG	6 cut(s)	249, 730, 1734, 2066, 2094, 2268
HphI	GGTGA	5 cut(s)	59, 952, 1723, 1946, 2132
Hpy166II	GTNNAC	8 cut(s)	67, 1272, 1365, 1578, 1599, 1783, 2146, 2229
Hpy188I	TCNGA	9 cut(s)	638, 1057, 1079, 1208, 1315, 1898, 1914, 2157, 2248
Hpy8I	GTNNAC	8 cut(s)	67, 1272, 1365, 1578, 1599, 1783, 2146, 2229
Hpy99I	CGWCG	2 cut(s)	344, 2319
HpyCH4III	ACNGT	8 cut(s)	71, 1217, 1447, 1596, 1718, 1893, 1934, 2011
HpyF10VI	GCNNNNNNNGC	4 cut(s)	667, 761, 1494, 2061
Ksp22I	TGATCA	1 cut(s)	816
KspAI	GTTAAC	1 cut(s)	1783
LguI	GCTCTTC	2 cut(s)	240, 1617
LmnI	GCTCC	3 cut(s)	993, 1550, 1967
Lsp1109I	GCAGC	4 cut(s)	42, 720, 2116, 2241
LweI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
MaeI	CTAG	4 cut(s)	224, 371, 629, 1136
MaeIII	GTNAC	3 cut(s)	979, 1261, 2120
MbiI	CCGCTC	1 cut(s)	487
MflI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2136, 2190
MhlI	GDGCHC	5 cut(s)	25, 1274, 1629, 1866, 1941
MlsI	TGGCCA	2 cut(s)	879, 1129
MluCI	AATT	3 cut(s)	779, 1092, 1253
MluNI	TGGCCA	2 cut(s)	879, 1129
MlyI	GAGTC	4 cut(s)	68, 1456, 1826, 2372
MmeI	TCCRAC	3 cut(s)	27, 151, 357
Mox20I	TGGCCA	2 cut(s)	879, 1129
Mph1103I	ATGCAT	1 cut(s)	501
MscI	TGGCCA	2 cut(s)	879, 1129
MseI	TTAA	3 cut(s)	807, 930, 1782
MslI	CAYNNNNRTG	5 cut(s)	72, 534, 1382, 1662, 2327
Msp20I	TGGCCA	2 cut(s)	879, 1129
MspA1I	CMGCKG	1 cut(s)	1370
MspCI	CTTAAG	1 cut(s)	929
MspI	CCGG	6 cut(s)	249, 730, 1734, 2066, 2094, 2268
MspR9I	CCNGG	7 cut(s)	249, 881, 1184, 1485, 1548, 1735, 2066
Mva1269I	GAATGC	2 cut(s)	969, 1765
MvaI	CCWGG	4 cut(s)	881, 1184, 1485, 1548
MvnI	CGCG	2 cut(s)	1497, 1923
MwoI	GCNNNNNNNGC	4 cut(s)	667, 761, 1494, 2061
NciI	CCSGG	3 cut(s)	249, 1735, 2066
NcoI	CCATGG	1 cut(s)	829
NdeI	CATATG	1 cut(s)	646
NlaIV	GGNNCC	2 cut(s)	756, 989
NmuCI	GTSAC	1 cut(s)	2120
NsiI	ATGCAT	1 cut(s)	501
NspI	RCATGY	2 cut(s)	499, 2294
OliI	CACNNNNGTG	1 cut(s)	1662
PaeI	GCATGC	1 cut(s)	499
PaeR7I	CTCGAG	3 cut(s)	287, 512, 773
PciSI	GCTCTTC	2 cut(s)	240, 1617
PctI	GAATGC	2 cut(s)	969, 1765
PfeI	GAWTC	1 cut(s)	1310
PflFI	GACNNNGTC	2 cut(s)	58, 851
PflMI	CCANNNNNTGG	1 cut(s)	2117
PkrI	GCNGC	5 cut(s)	32, 735, 2063, 2131, 2256
PleI	GAGTC	4 cut(s)	67, 1456, 1825, 2371
PpsI	GAGTC	4 cut(s)	67, 1456, 1825, 2371
Psp124BI	GAGCTC	3 cut(s)	1629, 1866, 1941
Psp6I	CCWGG	4 cut(s)	879, 1182, 1483, 1546
PspFI	CCCAGC	2 cut(s)	132, 1799
PspGI	CCWGG	4 cut(s)	879, 1182, 1483, 1546
PspN4I	GGNNCC	2 cut(s)	756, 989
PspPI	GGNCC	3 cut(s)	246, 742, 2063
PspXI	VCTCGAGB	2 cut(s)	287, 512
PstNI	CAGNNNCTG	1 cut(s)	1553
PsuI	RGATCY	6 cut(s)	78, 673, 792, 1107, 2136, 2190
PsyI	GACNNNGTC	2 cut(s)	58, 851
PvuII	CAGCTG	1 cut(s)	1370
RsaI	GTAC	8 cut(s)	317, 449, 1304, 1322, 1346, 1414, 1577, 1859
RsaNI	GTAC	8 cut(s)	316, 448, 1303, 1321, 1345, 1413, 1576, 1858
RseI	CAYNNNNRTG	5 cut(s)	72, 534, 1382, 1662, 2327
SacI	GAGCTC	3 cut(s)	1629, 1866, 1941
SapI	GCTCTTC	2 cut(s)	240, 1617
SaqAI	TTAA	3 cut(s)	807, 930, 1782
SatI	GCNGC	5 cut(s)	31, 734, 2062, 2130, 2255
Sau96I	GGNCC	3 cut(s)	246, 742, 2063
ScaI	AGTACT	1 cut(s)	317
SchI	GAGTC	4 cut(s)	68, 1456, 1826, 2372
ScrFI	CCNGG	7 cut(s)	249, 881, 1184, 1485, 1548, 1735, 2066
SduI	GDGCHC	5 cut(s)	25, 1274, 1629, 1866, 1941
SfaNI	GCATC	6 cut(s)	42, 508, 543, 751, 915, 988
SfcI	CTRYAG	2 cut(s)	1213, 1633
Sfr274I	CTCGAG	3 cut(s)	287, 512, 773
SinI	GGWCC	1 cut(s)	742
SlaI	CTCGAG	3 cut(s)	287, 512, 773
SmiMI	CAYNNNNRTG	5 cut(s)	72, 534, 1382, 1662, 2327
SphI	GCATGC	1 cut(s)	499
Sse9I	AATT	3 cut(s)	779, 1092, 1253
SsiI	CCGC	8 cut(s)	457, 487, 523, 1017, 1495, 1921, 1945, 2061
SspI	AATATT	1 cut(s)	1052
SspMI	CTAG	4 cut(s)	224, 371, 629, 1136
SstI	GAGCTC	3 cut(s)	1629, 1866, 1941
StyD4I	CCNGG	7 cut(s)	247, 879, 1182, 1483, 1546, 1733, 2064
StyI	CCWWGG	6 cut(s)	242, 798, 829, 1287, 1821, 2197
TaaI	ACNGT	8 cut(s)	71, 1217, 1447, 1596, 1718, 1893, 1934, 2011
TaqI	TCGA	9 cut(s)	95, 102, 288, 342, 513, 657, 774, 1620, 2217
TaqII	GACCGA	1 cut(s)	1409
TasI	AATT	3 cut(s)	779, 1092, 1253
TatI	WGTACW	2 cut(s)	315, 1320
TauI	GCSGC	1 cut(s)	2064
TfiI	GAWTC	1 cut(s)	1310
Tru1I	TTAA	3 cut(s)	807, 930, 1782
Tru9I	TTAA	3 cut(s)	807, 930, 1782
TscAI	CASTG	9 cut(s)	487, 510, 877, 1153, 1222, 1274, 1450, 1585, 2186
TseFI	GTSAC	1 cut(s)	2120
TseI	GCWGC	4 cut(s)	30, 733, 2129, 2254
Tsp45I	GTSAC	1 cut(s)	2120
TspGWI	ACGGA	2 cut(s)	1055, 1088
TspRI	CASTG	9 cut(s)	487, 510, 877, 1153, 1222, 1274, 1450, 1585, 2186
Tth111I	GACNNNGTC	2 cut(s)	58, 851
Van91I	CCANNNNNTGG	1 cut(s)	2117
Vha464I	CTTAAG	1 cut(s)	929
VneI	GTGCAC	1 cut(s)	1270
VpaK11BI	GGWCC	1 cut(s)	742
XagI	CCTNNNNNAGG	1 cut(s)	749
XapI	RAATTY	2 cut(s)	779, 1253
XbaI	TCTAGA	1 cut(s)	1135
XceI	RCATGY	2 cut(s)	499, 2294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1427
XhoI	CTCGAG	3 cut(s)	287, 512, 773
XmiI	GTMKAC	1 cut(s)	2228
XspI	CTAG	4 cut(s)	224, 371, 629, 1136
ZrmI	AGTACT	1 cut(s)	317
Zsp2I	ATGCAT	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.