function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00860 ATCG01280 |
| fragaria_vesca | FvH4_c3g00160 |
| malus_domestica | MD15G1364000.v1.1 MD15G1364100.v1.1 MD15G1364300.v1.1 |
| pyrus_communis | pycom11g21060 pycom12397g00050 pycom12397g00150 pycom13g12670 pycom13g17800 pycom1682g00010 pycom3137g00010 pycom3137g00020 |
| rosa_chinensis | RchiOBHm_Chr2g0118461 RchiOBHm_Chr2g0118471 |
| rosa_laevigata | RLG00000000001 RLG00000000007 RLG00000000030 RLG00000000031 RLG00000000036 RLG00000000037 RLG00000000059 RLG00000000060 RLG00000000094 RLG00000000095 RLG00000000101 RLG00000000102 RLG00000000181 RLG00000000182 RLG00000000214 RLG00000000215 RLG00000000239 RLG00000000254 RLG00000000255 RLG00000000301 RLG00000000305 RLG00000000306 RLG00000016742 RLG00000029142 RLG00000037092 RLG00000037093 RLG00000037098 RLG00000037099 RLG00000037112 |
| rosa_rugosa | RorugMtG0003000.1 RorugMtG0003400.1 |
| rosa_samantha | Rh1BG209600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 186 |
| AfeI | AGCGCT | 1 cut(s) | 348 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 90, 153, 154 |
| AgsI | TTSAA | 2 cut(s) | 16, 432 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 245, 277 |
| AlwI | GGATC | 1 cut(s) | 186 |
| Aor51HI | AGCGCT | 1 cut(s) | 348 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 314, 346, 359, 391 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 257 |
| AspLEI | GCGC | 1 cut(s) | 349 |
| BfaI | CTAG | 2 cut(s) | 186, 212 |
| BfmI | CTRYAG | 1 cut(s) | 177 |
| BfoI | RGCGCY | 1 cut(s) | 350 |
| BlpI | GCTNAGC | 1 cut(s) | 142 |
| BmsI | GCATC | 1 cut(s) | 402 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 142 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 90, 153, 154 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 90, 153, 154 |
| Bsh1285I | CGRYCG | 1 cut(s) | 370 |
| BsiEI | CGRYCG | 1 cut(s) | 370 |
| BsiSI | CCGG | 1 cut(s) | 416 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 90, 153, 154 |
| Bsp143I | GATC | 1 cut(s) | 191 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 142 |
| BspPI | GGATC | 1 cut(s) | 186 |
| BssMI | GATC | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 3 cut(s) | 244, 326, 371 |
| Bst6I | CTCTTC | 1 cut(s) | 433 |
| BstDEI | CTNAG | 1 cut(s) | 142 |
| BstH2I | RGCGCY | 1 cut(s) | 350 |
| BstHHI | GCGC | 1 cut(s) | 349 |
| BstKTI | GATC | 1 cut(s) | 194 |
| BstMBI | GATC | 1 cut(s) | 191 |
| BstMCI | CGRYCG | 1 cut(s) | 370 |
| BstSFI | CTRYAG | 1 cut(s) | 177 |
| CfoI | GCGC | 1 cut(s) | 349 |
| CviAII | CATG | 2 cut(s) | 24, 119 |
| CviJI | RGCY | 4 cut(s) | 95, 146, 203, 266 |
| CviKI_1 | RGCY | 4 cut(s) | 95, 146, 203, 266 |
| DdeI | CTNAG | 1 cut(s) | 142 |
| DpnI | GATC | 1 cut(s) | 193 |
| DpnII | GATC | 1 cut(s) | 191 |
| Eam1104I | CTCTTC | 1 cut(s) | 433 |
| EarI | CTCTTC | 1 cut(s) | 433 |
| Eco47III | AGCGCT | 1 cut(s) | 348 |
| FaeI | CATG | 2 cut(s) | 27, 122 |
| FaiI | YATR | 9 cut(s) | 9, 25, 115, 120, 179, 228, 383, 404, 410 |
| FatI | CATG | 2 cut(s) | 23, 118 |
| FspBI | CTAG | 2 cut(s) | 186, 212 |
| GlaI | GCGC | 1 cut(s) | 348 |
| HaeII | RGCGCY | 1 cut(s) | 350 |
| HapII | CCGG | 1 cut(s) | 416 |
| HhaI | GCGC | 1 cut(s) | 349 |
| Hin1II | CATG | 2 cut(s) | 27, 122 |
| Hin6I | GCGC | 1 cut(s) | 347 |
| HinP1I | GCGC | 1 cut(s) | 347 |
| HincII | GTYRAC | 1 cut(s) | 390 |
| HindII | GTYRAC | 1 cut(s) | 390 |
| HpaI | GTTAAC | 1 cut(s) | 390 |
| HpaII | CCGG | 1 cut(s) | 416 |
| Hpy166II | GTNNAC | 1 cut(s) | 390 |
| Hpy188I | TCNGA | 1 cut(s) | 252 |
| Hpy8I | GTNNAC | 1 cut(s) | 390 |
| HpyCH4III | ACNGT | 3 cut(s) | 244, 326, 371 |
| HpyF3I | CTNAG | 1 cut(s) | 142 |
| Hsp92II | CATG | 2 cut(s) | 27, 122 |
| HspAI | GCGC | 1 cut(s) | 347 |
| KspAI | GTTAAC | 1 cut(s) | 390 |
| Kzo9I | GATC | 1 cut(s) | 191 |
| LpnPI | CCDG | 3 cut(s) | 74, 100, 429 |
| LweI | GCATC | 1 cut(s) | 402 |
| MaeI | CTAG | 2 cut(s) | 186, 212 |
| MaeIII | GTNAC | 3 cut(s) | 326, 362, 371 |
| MalI | GATC | 1 cut(s) | 193 |
| MboI | GATC | 1 cut(s) | 191 |
| MboII | GAAGA | 1 cut(s) | 420 |
| MluCI | AATT | 3 cut(s) | 4, 66, 432 |
| MnlI | CCTC | 1 cut(s) | 94 |
| MroXI | GAANNNNTTC | 1 cut(s) | 257 |
| MseI | TTAA | 1 cut(s) | 389 |
| MspI | CCGG | 1 cut(s) | 416 |
| NdeII | GATC | 1 cut(s) | 191 |
| NlaIII | CATG | 2 cut(s) | 27, 122 |
| NmuCI | GTSAC | 3 cut(s) | 326, 362, 371 |
| PdmI | GAANNNNTTC | 1 cut(s) | 257 |
| SaqAI | TTAA | 1 cut(s) | 389 |
| Sau3AI | GATC | 1 cut(s) | 191 |
| SetI | ASST | 3 cut(s) | 86, 175, 213 |
| SfaNI | GCATC | 1 cut(s) | 402 |
| SfcI | CTRYAG | 1 cut(s) | 177 |
| Sse9I | AATT | 3 cut(s) | 4, 66, 432 |
| SspMI | CTAG | 2 cut(s) | 186, 212 |
| TaaI | ACNGT | 3 cut(s) | 244, 326, 371 |
| TasI | AATT | 3 cut(s) | 4, 66, 432 |
| Tru1I | TTAA | 1 cut(s) | 389 |
| Tru9I | TTAA | 1 cut(s) | 389 |
| TseFI | GTSAC | 3 cut(s) | 326, 362, 371 |
| Tsp45I | GTSAC | 3 cut(s) | 326, 362, 371 |
| TspDTI | ATGAA | 3 cut(s) | 17, 95, 226 |
| TspGWI | ACGGA | 1 cut(s) | 55 |
| XmnI | GAANNNNTTC | 1 cut(s) | 257 |
| XspI | CTAG | 2 cut(s) | 186, 212 |