function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00860 ATCG01280 |
| fragaria_vesca | FvH4_c3g00160 |
| malus_domestica | MD15G1364000.v1.1 MD15G1364100.v1.1 MD15G1364300.v1.1 |
| pyrus_communis | pycom11g21060 pycom12397g00050 pycom12397g00150 pycom13g12670 pycom13g17800 pycom1682g00010 pycom3137g00010 pycom3137g00020 |
| rosa_chinensis | RchiOBHm_Chr2g0118461 RchiOBHm_Chr2g0118471 |
| rosa_laevigata | RLG00000000001 RLG00000000007 RLG00000000030 RLG00000000031 RLG00000000036 RLG00000000037 RLG00000000059 RLG00000000060 RLG00000000094 RLG00000000095 RLG00000000101 RLG00000000102 RLG00000000181 RLG00000000182 RLG00000000214 RLG00000000215 RLG00000000239 RLG00000000254 RLG00000000255 RLG00000000301 RLG00000000305 RLG00000000306 RLG00000016742 RLG00000029142 RLG00000037092 RLG00000037093 RLG00000037098 RLG00000037099 RLG00000037112 |
| rosa_rugosa | RorugMtG0003000.1 RorugMtG0003400.1 |
| rosa_samantha | Rh1BG209600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1689 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3072 |
| AccB1I | GGYRCC | 1 cut(s) | 4878 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1952, 3485, 3991 |
| AccBSI | CCGCTC | 1 cut(s) | 4001 |
| AccIII | TCCGGA | 2 cut(s) | 52, 681 |
| AcuI | CTGAAG | 1 cut(s) | 2483 |
| AcyI | GRCGYC | 1 cut(s) | 4879 |
| AfaI | GTAC | 7 cut(s) | 818, 1976, 2701, 4167, 4356, 4436, 4445 |
| AflIII | ACRYGT | 1 cut(s) | 429 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 118, 2075, 4531 |
| AjnI | CCWGG | 5 cut(s) | 212, 584, 3155, 3633, 3923 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 57, 89, 317, 349, 596, 628 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2679, 2711, 3905, 3937 |
| AluBI | AGCT | 3 cut(s) | 2024, 3733, 4010 |
| AluI | AGCT | 3 cut(s) | 2024, 3733, 4010 |
| Alw26I | GTCTC | 5 cut(s) | 283, 3058, 3166, 3837, 4539 |
| Ama87I | CYCGRG | 2 cut(s) | 2721, 2868 |
| Aor13HI | TCCGGA | 2 cut(s) | 52, 681 |
| AoxI | GGCC | 4 cut(s) | 4194, 4609, 4703, 4913 |
| ApeKI | GCWGC | 1 cut(s) | 2433 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3704, 3736, 3815, 3847 |
| AseI | ATTAAT | 1 cut(s) | 1161 |
| Asp700I | GAANNNNTTC | 9 cut(s) | 69, 839, 986, 1445, 2330, 2586, 2837, 3629, 4121 |
| AspLEI | GCGC | 4 cut(s) | 3739, 3760, 4631, 4881 |
| AsuC2I | CCSGG | 3 cut(s) | 7, 306, 3318 |
| AsuHPI | GGTGA | 6 cut(s) | 1503, 1890, 1967, 2598, 3140, 3793 |
| AsuII | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| AsuNHI | GCTAGC | 1 cut(s) | 737 |
| AvaI | CYCGRG | 2 cut(s) | 2721, 2868 |
| AvaII | GGWCC | 8 cut(s) | 156, 679, 684, 1062, 1341, 1370, 2936, 4143 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1523, 1556 |
| BamHI | GGATCC | 4 cut(s) | 1036, 3994, 4314, 4640 |
| BanI | GGYRCC | 1 cut(s) | 4878 |
| BanII | GRGCYC | 1 cut(s) | 4867 |
| BbsI | GAAGAC | 2 cut(s) | 1406, 2507 |
| BbvI | GCAGC | 1 cut(s) | 2445 |
| BccI | CCATC | 6 cut(s) | 111, 2224, 2785, 3041, 3487, 4979 |
| BceAI | ACGGC | 1 cut(s) | 1107 |
| BciT130I | CCWGG | 5 cut(s) | 214, 586, 3157, 3635, 3925 |
| BciVI | GTATCC | 4 cut(s) | 419, 2363, 2458, 2826 |
| BclI | TGATCA | 6 cut(s) | 1378, 1459, 1491, 3241, 3271, 4759 |
| BcnI | CCSGG | 3 cut(s) | 7, 306, 3318 |
| BcoDI | GTCTC | 5 cut(s) | 283, 3058, 3166, 3837, 4539 |
| BfmI | CTRYAG | 2 cut(s) | 2728, 3549 |
| BfoI | RGCGCY | 3 cut(s) | 3740, 4632, 4882 |
| BfuI | GTATCC | 4 cut(s) | 419, 2363, 2458, 2826 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4887 |
| BglII | AGATCT | 3 cut(s) | 478, 4171, 4250 |
| BisI | GCNGC | 3 cut(s) | 1855, 2434, 2914 |
| BlpI | GCTNAGC | 1 cut(s) | 3508 |
| BlsI | GCNGC | 3 cut(s) | 1856, 2435, 2915 |
| Bme1390I | CCNGG | 8 cut(s) | 7, 214, 306, 586, 3157, 3318, 3635, 3925 |
| Bme18I | GGWCC | 8 cut(s) | 156, 679, 684, 1062, 1341, 1370, 2936, 4143 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 118, 2075, 4531 |
| BmeT110I | CYCGRG | 2 cut(s) | 2721, 2868 |
| BmrFI | CCNGG | 8 cut(s) | 7, 214, 306, 586, 3157, 3318, 3635, 3925 |
| BmsI | GCATC | 4 cut(s) | 52, 2158, 3765, 4722 |
| BmtI | GCTAGC | 1 cut(s) | 741 |
| BpiI | GAAGAC | 2 cut(s) | 1406, 2507 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3247, 3279 |
| BpmI | CTGGAG | 2 cut(s) | 568, 3907 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3508 |
| Bpu14I | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| BpuEI | CTTGAG | 2 cut(s) | 2282, 4506 |
| BpuMI | CCSGG | 3 cut(s) | 7, 306, 3318 |
| Bsa29I | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BsaAI | YACGTR | 3 cut(s) | 261, 1157, 1800 |
| BsaBI | GATNNNNATC | 6 cut(s) | 794, 1352, 2118, 2814, 4596, 4680 |
| BsaHI | GRCGYC | 1 cut(s) | 4879 |
| BsaI | GGTCTC | 2 cut(s) | 3166, 4539 |
| BsaJI | CCNNGG | 9 cut(s) | 585, 2348, 3156, 3648, 3898, 3924, 4152, 4712, 4883 |
| BsaWI | WCCGGW | 4 cut(s) | 52, 411, 681, 4633 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3905, 3935 |
| Bse1I | ACTGG | 1 cut(s) | 3562 |
| Bse3DI | GCAATG | 2 cut(s) | 3834, 4691 |
| Bse8I | GATNNNNATC | 6 cut(s) | 794, 1352, 2118, 2814, 4596, 4680 |
| BseAI | TCCGGA | 2 cut(s) | 52, 681 |
| BseBI | CCWGG | 5 cut(s) | 214, 586, 3157, 3635, 3925 |
| BseCI | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BseDI | CCNNGG | 9 cut(s) | 585, 2348, 3156, 3648, 3898, 3924, 4152, 4712, 4883 |
| BseJI | GATNNNNATC | 6 cut(s) | 794, 1352, 2118, 2814, 4596, 4680 |
| BseMI | GCAATG | 2 cut(s) | 3834, 4691 |
| BseMII | CTCAG | 5 cut(s) | 141, 1101, 1188, 2193, 2618 |
| BseNI | ACTGG | 1 cut(s) | 3562 |
| BseRI | GAGGAG | 1 cut(s) | 4850 |
| BseXI | GCAGC | 1 cut(s) | 2445 |
| Bsh1285I | CGRYCG | 6 cut(s) | 221, 865, 1150, 2037, 3715, 4518 |
| BshFI | GGCC | 4 cut(s) | 4196, 4611, 4705, 4915 |
| BshNI | GGYRCC | 1 cut(s) | 4878 |
| BshVI | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BsiEI | CGRYCG | 6 cut(s) | 221, 865, 1150, 2037, 3715, 4518 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2721, 2868 |
| BslFI | GGGAC | 3 cut(s) | 191, 2082, 2922 |
| BsmAI | GTCTC | 5 cut(s) | 283, 3058, 3166, 3837, 4539 |
| BsmBI | CGTCTC | 1 cut(s) | 283 |
| BsmFI | GGGAC | 3 cut(s) | 191, 2082, 2922 |
| BsmI | GAATGC | 1 cut(s) | 3760 |
| BsnI | GGCC | 4 cut(s) | 4196, 4611, 4705, 4915 |
| Bso31I | GGTCTC | 2 cut(s) | 3166, 4539 |
| BsoBI | CYCGRG | 2 cut(s) | 2721, 2868 |
| Bsp119I | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| Bsp1286I | GDGCHC | 1 cut(s) | 4867 |
| Bsp13I | TCCGGA | 2 cut(s) | 52, 681 |
| Bsp1407I | TGTACA | 2 cut(s) | 1974, 4434 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3508 |
| Bsp19I | CCATGG | 2 cut(s) | 2348, 4152 |
| BspANI | GGCC | 4 cut(s) | 4196, 4611, 4705, 4915 |
| BspCNI | CTCAG | 5 cut(s) | 142, 1102, 1189, 2194, 2619 |
| BspDI | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BspEI | TCCGGA | 2 cut(s) | 52, 681 |
| BspHI | TCATGA | 3 cut(s) | 1462, 2458, 3862 |
| BspOI | GCTAGC | 1 cut(s) | 741 |
| BspQI | GCTCTTC | 2 cut(s) | 1112, 4263 |
| BspT104I | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| BspT107I | GGYRCC | 1 cut(s) | 4878 |
| BspTNI | GGTCTC | 2 cut(s) | 3166, 4539 |
| BsrBI | CCGCTC | 1 cut(s) | 4001 |
| BsrDI | GCAATG | 2 cut(s) | 3834, 4691 |
| BsrGI | TGTACA | 2 cut(s) | 1974, 4434 |
| BsrI | ACTGG | 1 cut(s) | 3562 |
| BssECI | CCNNGG | 9 cut(s) | 585, 2348, 3156, 3648, 3898, 3924, 4152, 4712, 4883 |
| BssNI | GRCGYC | 1 cut(s) | 4879 |
| BssT1I | CCWWGG | 5 cut(s) | 2348, 3648, 4152, 4712, 4883 |
| Bst2UI | CCWGG | 5 cut(s) | 214, 586, 3157, 3635, 3925 |
| Bst4CI | ACNGT | 6 cut(s) | 277, 347, 3128, 3170, 3616, 3716 |
| Bst6I | CTCTTC | 5 cut(s) | 450, 633, 1112, 4263, 4974 |
| BstACI | GRCGYC | 1 cut(s) | 4879 |
| BstAUI | TGTACA | 2 cut(s) | 1974, 4434 |
| BstBAI | YACGTR | 3 cut(s) | 261, 1157, 1800 |
| BstBI | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| BstC8I | GCNNGC | 3 cut(s) | 739, 3735, 4961 |
| BstDSI | CCRYGG | 2 cut(s) | 2348, 4152 |
| BstH2I | RGCGCY | 3 cut(s) | 3740, 4632, 4882 |
| BstHHI | GCGC | 4 cut(s) | 3739, 3760, 4631, 4881 |
| BstMAI | GTCTC | 5 cut(s) | 283, 3058, 3166, 3837, 4539 |
| BstMCI | CGRYCG | 6 cut(s) | 221, 865, 1150, 2037, 3715, 4518 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 4007, 4628, 4702, 4887 |
| BstNI | CCWGG | 5 cut(s) | 214, 586, 3157, 3635, 3925 |
| BstNSI | RCATGY | 2 cut(s) | 2923, 4032 |
| BstSCI | CCNGG | 8 cut(s) | 5, 212, 304, 584, 3155, 3316, 3633, 3923 |
| BstSFI | CTRYAG | 2 cut(s) | 2728, 3549 |
| BstSNI | TACGTA | 3 cut(s) | 261, 1157, 1800 |
| BstV1I | GCAGC | 1 cut(s) | 2445 |
| BstV2I | GAAGAC | 2 cut(s) | 1406, 2507 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 4133, 4153, 4924 |
| Bsu15I | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BsuI | GTATCC | 4 cut(s) | 419, 2363, 2458, 2826 |
| BsuRI | GGCC | 4 cut(s) | 4196, 4611, 4705, 4915 |
| BsuTUI | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| BtgI | CCRYGG | 2 cut(s) | 2348, 4152 |
| BtsIMutI | CAGTG | 1 cut(s) | 3175 |
| Cac8I | GCNNGC | 3 cut(s) | 739, 3735, 4961 |
| CciI | TCATGA | 3 cut(s) | 1462, 2458, 3862 |
| CfoI | GCGC | 4 cut(s) | 3739, 3760, 4631, 4881 |
| ClaI | ATCGAT | 5 cut(s) | 838, 1150, 2997, 3006, 4202 |
| Csp6I | GTAC | 7 cut(s) | 817, 1975, 2700, 4166, 4355, 4435, 4444 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 708, 743 |
| CviQI | GTAC | 7 cut(s) | 817, 1975, 2700, 4166, 4355, 4435, 4444 |
| DinI | GGCGCC | 1 cut(s) | 4880 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3072 |
| DriI | GACNNNNNGTC | 3 cut(s) | 118, 2075, 4531 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3072 |
| Eam1104I | CTCTTC | 5 cut(s) | 450, 633, 1112, 4263, 4974 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 118, 2075, 4531 |
| EarI | CTCTTC | 5 cut(s) | 450, 633, 1112, 4263, 4974 |
| EciI | GGCGGA | 1 cut(s) | 2287 |
| Eco105I | TACGTA | 3 cut(s) | 261, 1157, 1800 |
| Eco130I | CCWWGG | 5 cut(s) | 2348, 3648, 4152, 4712, 4883 |
| Eco24I | GRGCYC | 1 cut(s) | 4867 |
| Eco31I | GGTCTC | 2 cut(s) | 3166, 4539 |
| Eco32I | GATATC | 5 cut(s) | 1617, 1677, 2616, 2690, 3001 |
| Eco47I | GGWCC | 8 cut(s) | 156, 679, 684, 1062, 1341, 1370, 2936, 4143 |
| Eco57I | CTGAAG | 1 cut(s) | 2483 |
| Eco88I | CYCGRG | 2 cut(s) | 2721, 2868 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4195 |
| EcoRI | GAATTC | 5 cut(s) | 882, 2493, 2833, 3197, 5040 |
| EcoRII | CCWGG | 5 cut(s) | 212, 584, 3155, 3633, 3923 |
| EcoRV | GATATC | 5 cut(s) | 1617, 1677, 2616, 2690, 3001 |
| EcoT14I | CCWWGG | 5 cut(s) | 2348, 3648, 4152, 4712, 4883 |
| EcoT22I | ATGCAT | 3 cut(s) | 1048, 2472, 4034 |
| EcoT38I | GRGCYC | 1 cut(s) | 4867 |
| EgeI | GGCGCC | 1 cut(s) | 4880 |
| EheI | GGCGCC | 1 cut(s) | 4880 |
| ErhI | CCWWGG | 5 cut(s) | 2348, 3648, 4152, 4712, 4883 |
| Esp3I | CGTCTC | 1 cut(s) | 283 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 57, 89, 2840, 2872 |
| FaqI | GGGAC | 3 cut(s) | 191, 2082, 2922 |
| FauI | CCCGC | 4 cut(s) | 686, 2947, 4006, 4830 |
| FbaI | TGATCA | 6 cut(s) | 1378, 1459, 1491, 3241, 3271, 4759 |
| Fnu4HI | GCNGC | 3 cut(s) | 1855, 2434, 2914 |
| FriOI | GRGCYC | 1 cut(s) | 4867 |
| Fsp4HI | GCNGC | 3 cut(s) | 1855, 2434, 2914 |
| GlaI | GCGC | 4 cut(s) | 3738, 3759, 4630, 4880 |
| GluI | GCNGC | 3 cut(s) | 1855, 2434, 2914 |
| GsuI | CTGGAG | 2 cut(s) | 568, 3907 |
| HaeII | RGCGCY | 3 cut(s) | 3740, 4632, 4882 |
| HaeIII | GGCC | 4 cut(s) | 4196, 4611, 4705, 4915 |
| HhaI | GCGC | 4 cut(s) | 3739, 3760, 4631, 4881 |
| Hin1I | GRCGYC | 1 cut(s) | 4879 |
| Hin6I | GCGC | 4 cut(s) | 3737, 3758, 4629, 4879 |
| HinP1I | GCGC | 4 cut(s) | 3737, 3758, 4629, 4879 |
| HincII | GTYRAC | 2 cut(s) | 2102, 3346 |
| HindII | GTYRAC | 2 cut(s) | 2102, 3346 |
| HphI | GGTGA | 6 cut(s) | 1503, 1890, 1967, 2598, 3140, 3793 |
| Hpy166II | GTNNAC | 7 cut(s) | 159, 2102, 2558, 2702, 3124, 3346, 3913 |
| Hpy8I | GTNNAC | 7 cut(s) | 159, 2102, 2558, 2702, 3124, 3346, 3913 |
| Hpy99I | CGWCG | 1 cut(s) | 3695 |
| HpyCH4III | ACNGT | 6 cut(s) | 277, 347, 3128, 3170, 3616, 3716 |
| HpyCH4IV | ACGT | 7 cut(s) | 22, 260, 431, 1156, 1799, 2962, 3120 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 4007, 4628, 4702, 4887 |
| HpySE526I | ACGT | 7 cut(s) | 22, 260, 431, 1156, 1799, 2962, 3120 |
| Hsp92I | GRCGYC | 1 cut(s) | 4879 |
| HspAI | GCGC | 4 cut(s) | 3737, 3758, 4629, 4879 |
| KasI | GGCGCC | 1 cut(s) | 4878 |
| Kpn2I | TCCGGA | 2 cut(s) | 52, 681 |
| Ksp22I | TGATCA | 6 cut(s) | 1378, 1459, 1491, 3241, 3271, 4759 |
| LguI | GCTCTTC | 2 cut(s) | 1112, 4263 |
| LmnI | GCTCC | 8 cut(s) | 1071, 3320, 3507, 3730, 4015, 4376, 4636, 4870 |
| Lsp1109I | GCAGC | 1 cut(s) | 2445 |
| LweI | GCATC | 4 cut(s) | 52, 2158, 3765, 4722 |
| MaeII | ACGT | 7 cut(s) | 22, 260, 431, 1156, 1799, 2962, 3120 |
| MbiI | CCGCTC | 1 cut(s) | 4001 |
| MfeI | CAATTG | 1 cut(s) | 1633 |
| MhlI | GDGCHC | 1 cut(s) | 4867 |
| Mly113I | GGCGCC | 1 cut(s) | 4879 |
| MlyI | GAGTC | 9 cut(s) | 982, 1544, 2612, 3256, 3265, 3890, 3967, 4572, 4821 |
| Mph1103I | ATGCAT | 3 cut(s) | 1048, 2472, 4034 |
| MroI | TCCGGA | 2 cut(s) | 52, 681 |
| MroXI | GAANNNNTTC | 9 cut(s) | 69, 839, 986, 1445, 2330, 2586, 2837, 3629, 4121 |
| MseI | TTAA | 8 cut(s) | 240, 848, 1161, 2846, 3221, 4022, 4035, 4475 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1356, 4131, 4151 |
| MspR9I | CCNGG | 8 cut(s) | 7, 214, 306, 586, 3157, 3318, 3635, 3925 |
| MunI | CAATTG | 1 cut(s) | 1633 |
| Mva1269I | GAATGC | 1 cut(s) | 3760 |
| MvaI | CCWGG | 5 cut(s) | 214, 586, 3157, 3635, 3925 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 4007, 4628, 4702, 4887 |
| NarI | GGCGCC | 1 cut(s) | 4879 |
| NciI | CCSGG | 3 cut(s) | 7, 306, 3318 |
| NcoI | CCATGG | 2 cut(s) | 2348, 4152 |
| NheI | GCTAGC | 1 cut(s) | 737 |
| NmuCI | GTSAC | 7 cut(s) | 1227, 1955, 2604, 3671, 3707, 3716, 4687 |
| NsiI | ATGCAT | 3 cut(s) | 1048, 2472, 4034 |
| NspI | RCATGY | 2 cut(s) | 2923, 4032 |
| NspV | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| PaeR7I | CTCGAG | 1 cut(s) | 2721 |
| PagI | TCATGA | 3 cut(s) | 1462, 2458, 3862 |
| PciSI | GCTCTTC | 2 cut(s) | 1112, 4263 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 3003, 3059 |
| PctI | GAATGC | 1 cut(s) | 3760 |
| PdmI | GAANNNNTTC | 9 cut(s) | 69, 839, 986, 1445, 2330, 2586, 2837, 3629, 4121 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1952, 3485, 3991 |
| PfoI | TCCNGGA | 1 cut(s) | 304 |
| PkrI | GCNGC | 3 cut(s) | 1856, 2435, 2915 |
| Ple19I | CGATCG | 4 cut(s) | 221, 865, 1150, 2037 |
| PleI | GAGTC | 9 cut(s) | 981, 1544, 2611, 3256, 3264, 3889, 3967, 4572, 4820 |
| PluTI | GGCGCC | 1 cut(s) | 4882 |
| PpsI | GAGTC | 9 cut(s) | 981, 1544, 2611, 3256, 3264, 3889, 3967, 4572, 4820 |
| Ppu21I | YACGTR | 3 cut(s) | 261, 1157, 1800 |
| PshBI | ATTAAT | 1 cut(s) | 1161 |
| PsiI | TTATAA | 1 cut(s) | 1689 |
| Psp6I | CCWGG | 5 cut(s) | 212, 584, 3155, 3633, 3923 |
| PspGI | CCWGG | 5 cut(s) | 212, 584, 3155, 3633, 3923 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4284, 4316 |
| PvuI | CGATCG | 4 cut(s) | 221, 865, 1150, 2037 |
| RsaI | GTAC | 7 cut(s) | 818, 1976, 2701, 4167, 4356, 4436, 4445 |
| RsaNI | GTAC | 7 cut(s) | 817, 1975, 2700, 4166, 4355, 4435, 4444 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1356, 4131, 4151 |
| SapI | GCTCTTC | 2 cut(s) | 1112, 4263 |
| SaqAI | TTAA | 8 cut(s) | 240, 848, 1161, 2846, 3221, 4022, 4035, 4475 |
| SatI | GCNGC | 3 cut(s) | 1855, 2434, 2914 |
| SchI | GAGTC | 9 cut(s) | 982, 1544, 2612, 3256, 3265, 3890, 3967, 4572, 4821 |
| ScrFI | CCNGG | 8 cut(s) | 7, 214, 306, 586, 3157, 3318, 3635, 3925 |
| SduI | GDGCHC | 1 cut(s) | 4867 |
| SfaNI | GCATC | 4 cut(s) | 52, 2158, 3765, 4722 |
| SfcI | CTRYAG | 2 cut(s) | 2728, 3549 |
| SfoI | GGCGCC | 1 cut(s) | 4880 |
| Sfr274I | CTCGAG | 1 cut(s) | 2721 |
| SfuI | TTCGAA | 5 cut(s) | 140, 873, 2751, 3813, 4449 |
| SinI | GGWCC | 8 cut(s) | 156, 679, 684, 1062, 1341, 1370, 2936, 4143 |
| SlaI | CTCGAG | 1 cut(s) | 2721 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1356, 4131, 4151 |
| SmlI | CTYRAG | 3 cut(s) | 2261, 2721, 4521 |
| SmoI | CTYRAG | 3 cut(s) | 2261, 2721, 4521 |
| SnaBI | TACGTA | 3 cut(s) | 261, 1157, 1800 |
| SspDI | GGCGCC | 1 cut(s) | 4878 |
| SspI | AATATT | 5 cut(s) | 1169, 1842, 2210, 2978, 3955 |
| StyD4I | CCNGG | 8 cut(s) | 5, 212, 304, 584, 3155, 3316, 3633, 3923 |
| StyI | CCWWGG | 5 cut(s) | 2348, 3648, 4152, 4712, 4883 |
| TaaI | ACNGT | 6 cut(s) | 277, 347, 3128, 3170, 3616, 3716 |
| TaiI | ACGT | 7 cut(s) | 25, 263, 434, 1159, 1802, 2965, 3123 |
| TaqII | GACCGA | 3 cut(s) | 3804, 3890, 4504 |
| TatI | WGTACW | 3 cut(s) | 1974, 4354, 4434 |
| TauI | GCSGC | 2 cut(s) | 1857, 2916 |
| Tru1I | TTAA | 8 cut(s) | 240, 848, 1161, 2846, 3221, 4022, 4035, 4475 |
| Tru9I | TTAA | 8 cut(s) | 240, 848, 1161, 2846, 3221, 4022, 4035, 4475 |
| TscAI | CASTG | 1 cut(s) | 3175 |
| TseFI | GTSAC | 7 cut(s) | 1227, 1955, 2604, 3671, 3707, 3716, 4687 |
| TseI | GCWGC | 1 cut(s) | 2433 |
| Tsp45I | GTSAC | 7 cut(s) | 1227, 1955, 2604, 3671, 3707, 3716, 4687 |
| TspGWI | ACGGA | 5 cut(s) | 32, 3421, 3743, 4663, 4843 |
| TspRI | CASTG | 1 cut(s) | 3175 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1952, 3485, 3991 |
| VpaK11BI | GGWCC | 8 cut(s) | 156, 679, 684, 1062, 1341, 1370, 2936, 4143 |
| VspI | ATTAAT | 1 cut(s) | 1161 |
| XbaI | TCTAGA | 1 cut(s) | 2890 |
| XceI | RCATGY | 2 cut(s) | 2923, 4032 |
| XhoI | CTCGAG | 1 cut(s) | 2721 |
| XmnI | GAANNNNTTC | 9 cut(s) | 69, 839, 986, 1445, 2330, 2586, 2837, 3629, 4121 |
| Zsp2I | ATGCAT | 3 cut(s) | 1048, 2472, 4034 |