MD15G1379600.v1.1

Chaperone protein DNAj

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
46707747 .. 46716452
8706 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1379600.v1.1.491

Sequence Viewer

Length: 1314 bp
ATGCGAAGCTCAAGCTTCCTCGGCCTGCTTCGGAGGCGGCTGGTGTCGTCGGTGGCGGCAGAATCGCCCATTGATGAAGCAGATTGGACCCGGAGCCTCTCCTCGCTCAGTGAGGCATTTTATCGAACACCTGGTTCGAGCTCCGGCGGGTCGGTGGTTGGCTTGGCTAGCACATTGGGAATTCGTTATTTCCATGCCTCAGGGTTTTGCCGAGCAGCTGAACGAGATTATTATGAGACTCTTGGTGTTTCGAAAAATGCAAGCCGAGATGAGATTAAAAAAGCATTTCGCATGCTTGCCAAGAAATACCATCCAGATGCAAATAGGGACAATCCTTCTTCTAAAAGAAAATTTCAAGAGATAAGAGATGCCTATGAGACTTTGCAAGATCCTGAAAAGAGGGCGCAATATGACAGGAAGCGTTCAAGTGGGTCAGAAAACGTAGGATATACAGCTGGACGTGCAGACGGGTTTAGGTATGAGAATCAGAGTCACGGTACTGCTGGTGCAGAGGGGTTTAGATATGGTTTTGAAACTAATTTTTCCAGTTCATTCCATAAAATATTCCAAGAGATCTTTGAACATGAGTTTGATCAAGTTGGATCAAATATCCAGGTGGAGTTGTCACTTTCTTTCTCTGAAGCTGTTAAAGGATGCACAAAGCATCTCTCTGTCAATTCACATGTTCCCTGTGATTCTTGCCATGGGCATGGCTATCCACTAAATGCCAAGACCAAAGTTTGTCCTACTTGTAGAGGTATTGGGAGAGTTACAATTCCTCCATTCACATCAACATGCAGTACGTGTAAAGGATCCGGCCAAATAATCAAGGAATATTGCTTGTCATGCAGAGGAGTAGGGATTGTTGAAGGTGTTAGACAGGTGTGGAGTCTGGAGACACAATCAGCATTCCAGAGGCTGGGAATAGTGGGGCACGAGGAAGTTGATGAAGATCCTATCTTTTCTAGAGATGGTGCAGATCTTTATGTGGACTCTAGTATTAGCTTTACACAAGCTATTCTTGGTGGTACGGTTGAAGTACCAACTTTGTCTGGGAAGATAGAAGTAAAAATACCAAAGGGGGTTCAGCCTGGCCAACATCTGGTACTAAGAGGCAAAGGACTGCCAAAACATGGTTTCCTAGTTAAGCATGGAGATCAATATGTGCGATTCCGTGTTAAATTTCCCACTGAACTCAACGAAAGGCAACGTGCTATATTAGAAGAATTTGCGAAGGAGGAAATTATTCATGGAGACAGTACTTCCAGTTCCAATGAAAGAGATTGGCTTTATCAGCAGCTATCTACTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

438

Amino Acids

48.5

Weight (kDa)

8.24

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 76 - 138 2.2e-26 DnaJ domain
DnaJ_C PF01556 204 - 396 1.5e-28 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 231 - 286 4.9e-09 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 919, 1102, 1133
AciI CCGC 3 cut(s) 37, 56, 147
AclWI GGATC 5 cut(s) 383, 610, 807, 820, 947
AcoI YGGCCR 2 cut(s) 817, 1093
AcsI RAATTY 4 cut(s) 180, 350, 1181, 1226
AcuI CTGAAG 1 cut(s) 660
AfaI GTAC 6 cut(s) 499, 802, 1030, 1041, 1107, 1261
AfiI CCNNNNNNNGG 3 cut(s) 919, 1102, 1133
AflIII ACRYGT 2 cut(s) 682, 803
AgsI TTSAA 6 cut(s) 356, 426, 533, 581, 869, 1037
AjiI CACGTC 1 cut(s) 461
AjnI CCWGG 3 cut(s) 130, 612, 1090
AluBI AGCT 9 cut(s) 9, 15, 141, 218, 455, 644, 1005, 1016, 1300
AluI AGCT 9 cut(s) 9, 15, 141, 218, 455, 644, 1005, 1016, 1300
Alw21I GWGCWC 1 cut(s) 143
Alw26I GTCTC 4 cut(s) 230, 371, 890, 1248
AlwI GGATC 5 cut(s) 383, 610, 807, 820, 947
AlwNI CAGNNNCTG 1 cut(s) 919
AoxI GGCC 3 cut(s) 22, 817, 1093
ApeKI GCWGC 2 cut(s) 215, 1297
ApoI RAATTY 4 cut(s) 180, 350, 1181, 1226
Asp700I GAANNNNTTC 1 cut(s) 1245
AspLEI GCGC 1 cut(s) 406
AspS9I GGNCC 1 cut(s) 87
AsuC2I CCSGG 1 cut(s) 91
AsuII TTCGAA 1 cut(s) 251
AsuNHI GCTAGC 1 cut(s) 167
AvaII GGWCC 1 cut(s) 87
AxyI CCTNAGG 1 cut(s) 199
BaeGI GKGCMC 1 cut(s) 936
BalI TGGCCA 1 cut(s) 1095
BamHI GGATCC 1 cut(s) 812
BanII GRGCYC 1 cut(s) 143
BarI GAAGNNNNNNTAC 2 cut(s) 1056, 1088
BauI CACGAG 1 cut(s) 935
Bbv12I GWGCWC 1 cut(s) 143
BbvI GCAGC 2 cut(s) 227, 1309
BccI CCATC 2 cut(s) 318, 965
BciT130I CCWGG 3 cut(s) 132, 614, 1092
BclI TGATCA 1 cut(s) 592
BcnI CCSGG 1 cut(s) 91
BcoDI GTCTC 4 cut(s) 230, 371, 890, 1248
BfaI CTAG 4 cut(s) 168, 966, 996, 1142
BglII AGATCT 2 cut(s) 573, 979
BisI GCNGC 4 cut(s) 38, 57, 216, 1298
BlsI GCNGC 4 cut(s) 39, 58, 217, 1299
BmcAI AGTACT 1 cut(s) 1261
Bme1390I CCNGG 4 cut(s) 91, 132, 614, 1092
Bme18I GGWCC 1 cut(s) 87
BmgBI CACGTC 1 cut(s) 461
BmgT120I GGNCC 1 cut(s) 87
BmiI GGNNCC 3 cut(s) 89, 95, 814
BmrFI CCNGG 4 cut(s) 91, 132, 614, 1092
BmsI GCATC 4 cut(s) 307, 358, 644, 673
BmtI GCTAGC 1 cut(s) 171
BpmI CTGGAG 1 cut(s) 914
Bpu14I TTCGAA 1 cut(s) 251
BpuMI CCSGG 1 cut(s) 91
BsaAI YACGTR 1 cut(s) 804
BsaBI GATNNNNATC 1 cut(s) 951
BsaJI CCNNGG 2 cut(s) 19, 703
BsaXI ACNNNNNCTCC 2 cut(s) 763, 793
Bsc4I CCNNNNNNNGG 3 cut(s) 919, 1102, 1133
Bse1I ACTGG 3 cut(s) 546, 1266, 1312
Bse21I CCTNAGG 1 cut(s) 199
Bse8I GATNNNNATC 1 cut(s) 951
BseBI CCWGG 3 cut(s) 132, 614, 1092
BseDI CCNNGG 2 cut(s) 19, 703
BseGI GGATG 2 cut(s) 310, 659
BseJI GATNNNNATC 1 cut(s) 951
BseLI CCNNNNNNNGG 3 cut(s) 919, 1102, 1133
BseMII CTCAG 2 cut(s) 121, 213
BseNI ACTGG 3 cut(s) 546, 1266, 1312
BseRI GAGGAG 2 cut(s) 91, 867
BseSI GKGCMC 1 cut(s) 936
BseXI GCAGC 2 cut(s) 227, 1309
BseYI CCCAGC 1 cut(s) 919
BsgI GTGCAG 3 cut(s) 483, 528, 996
BshFI GGCC 3 cut(s) 24, 819, 1095
BsiHKAI GWGCWC 1 cut(s) 143
BsiSI CCGG 3 cut(s) 91, 144, 816
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 3 cut(s) 919, 1102, 1133
BsmAI GTCTC 4 cut(s) 230, 371, 890, 1248
BsmFI GGGAC 1 cut(s) 341
BsmI GAATGC 1 cut(s) 908
BsnI GGCC 3 cut(s) 24, 819, 1095
Bsp119I TTCGAA 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 143, 936
Bsp143I GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
Bsp19I CCATGG 1 cut(s) 703
BspACI CCGC 3 cut(s) 37, 56, 147
BspANI GGCC 3 cut(s) 24, 819, 1095
BspCNI CTCAG 2 cut(s) 120, 212
BspLI GGNNCC 3 cut(s) 89, 95, 814
BspOI GCTAGC 1 cut(s) 171
BspPI GGATC 5 cut(s) 383, 610, 807, 820, 947
BspT104I TTCGAA 1 cut(s) 251
BsrI ACTGG 3 cut(s) 546, 1266, 1312
BssECI CCNNGG 2 cut(s) 19, 703
BssMI GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
BssSI CACGAG 1 cut(s) 935
BssT1I CCWWGG 1 cut(s) 703
Bst2BI CACGAG 1 cut(s) 935
Bst2UI CCWGG 3 cut(s) 132, 614, 1092
Bst4CI ACNGT 3 cut(s) 497, 1033, 1259
BstBAI YACGTR 1 cut(s) 804
BstBI TTCGAA 1 cut(s) 251
BstC8I GCNNGC 5 cut(s) 26, 169, 262, 293, 297
BstDEI CTNAG 3 cut(s) 107, 199, 1109
BstDSI CCRYGG 1 cut(s) 703
BstF5I GGATG 2 cut(s) 310, 659
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 8 cut(s) 391, 576, 595, 605, 815, 955, 982, 1159
BstMAI GTCTC 4 cut(s) 230, 371, 890, 1248
BstMBI GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
BstMWI GCNNNNNNNGC 6 cut(s) 21, 34, 168, 461, 846, 1294
BstNI CCWGG 3 cut(s) 132, 614, 1092
BstNSI RCATGY 3 cut(s) 295, 686, 798
BstSCI CCNGG 4 cut(s) 89, 130, 612, 1090
BstSLI GKGCMC 1 cut(s) 936
BstV1I GCAGC 2 cut(s) 227, 1309
BstX2I RGATCY 5 cut(s) 388, 573, 812, 952, 979
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 5 cut(s) 388, 573, 812, 952, 979
Bsu36I CCTNAGG 1 cut(s) 199
BsuRI GGCC 3 cut(s) 24, 819, 1095
BtgI CCRYGG 1 cut(s) 703
BtrI CACGTC 1 cut(s) 461
BtsCI GGATG 2 cut(s) 310, 659
BtsIMutI CAGTG 2 cut(s) 115, 1188
Cac8I GCNNGC 5 cut(s) 26, 169, 262, 293, 297
CaiI CAGNNNCTG 1 cut(s) 919
CfoI GCGC 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 87
CsiI ACCWGGT 1 cut(s) 130
Csp6I GTAC 6 cut(s) 498, 801, 1029, 1040, 1106, 1260
CviQI GTAC 6 cut(s) 498, 801, 1029, 1040, 1106, 1260
DdeI CTNAG 3 cut(s) 107, 199, 1109
DpnI GATC 8 cut(s) 390, 575, 594, 604, 814, 954, 981, 1158
DpnII GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
EaeI YGGCCR 2 cut(s) 817, 1093
Ecl136II GAGCTC 1 cut(s) 141
Eco130I CCWWGG 1 cut(s) 703
Eco24I GRGCYC 1 cut(s) 143
Eco47I GGWCC 1 cut(s) 87
Eco53kI GAGCTC 1 cut(s) 141
Eco57I CTGAAG 1 cut(s) 660
Eco81I CCTNAGG 1 cut(s) 199
EcoICRI GAGCTC 1 cut(s) 141
EcoRI GAATTC 1 cut(s) 180
EcoRII CCWGG 3 cut(s) 130, 612, 1090
EcoT14I CCWWGG 1 cut(s) 703
EcoT38I GRGCYC 1 cut(s) 143
ErhI CCWWGG 1 cut(s) 703
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FaqI GGGAC 1 cut(s) 341
FauI CCCGC 1 cut(s) 140
FbaI TGATCA 1 cut(s) 592
Fnu4HI GCNGC 4 cut(s) 38, 57, 216, 1298
FokI GGATG 2 cut(s) 297, 666
FriOI GRGCYC 1 cut(s) 143
Fsp4HI GCNGC 4 cut(s) 38, 57, 216, 1298
FspBI CTAG 4 cut(s) 168, 966, 996, 1142
GlaI GCGC 1 cut(s) 405
GluI GCNGC 4 cut(s) 38, 57, 216, 1298
GsaI CCCAGC 1 cut(s) 923
GsuI CTGGAG 1 cut(s) 914
HaeIII GGCC 3 cut(s) 24, 819, 1095
HapII CCGG 3 cut(s) 91, 144, 816
HhaI GCGC 1 cut(s) 406
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HindIII AAGCTT 1 cut(s) 13
HinfI GANTC 8 cut(s) 62, 238, 484, 490, 695, 889, 992, 1170
HpaII CCGG 3 cut(s) 91, 144, 816
Hpy166II GTNNAC 1 cut(s) 991
Hpy188I TCNGA 4 cut(s) 33, 436, 489, 640
Hpy188III TCNNGA 6 cut(s) 314, 356, 392, 893, 913, 966
Hpy8I GTNNAC 1 cut(s) 991
Hpy99I CGWCG 1 cut(s) 52
HpyAV CCTTC 3 cut(s) 345, 863, 1228
HpyCH4III ACNGT 3 cut(s) 497, 1033, 1259
HpyCH4IV ACGT 4 cut(s) 441, 460, 803, 1210
HpyCH4V TGCA 9 cut(s) 260, 320, 385, 464, 509, 657, 798, 849, 977
HpyF10VI GCNNNNNNNGC 6 cut(s) 21, 34, 168, 461, 846, 1294
HpyF3I CTNAG 3 cut(s) 107, 199, 1109
HpySE526I ACGT 4 cut(s) 441, 460, 803, 1210
HspAI GCGC 1 cut(s) 404
Ksp22I TGATCA 1 cut(s) 592
Kzo9I GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
LmnI GCTCC 2 cut(s) 93, 146
Lsp1109I GCAGC 2 cut(s) 227, 1309
LweI GCATC 4 cut(s) 307, 358, 644, 673
MabI ACCWGGT 1 cut(s) 130
MaeI CTAG 4 cut(s) 168, 966, 996, 1142
MaeII ACGT 4 cut(s) 441, 460, 803, 1210
MaeIII GTNAC 3 cut(s) 491, 624, 769
MalI GATC 8 cut(s) 390, 575, 594, 604, 814, 954, 981, 1158
MboI GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
MboII GAAGA 4 cut(s) 330, 962, 1069, 1235
MflI RGATCY 5 cut(s) 388, 573, 812, 952, 979
MhlI GDGCHC 2 cut(s) 143, 936
MlsI TGGCCA 1 cut(s) 1095
MluCI AATT 8 cut(s) 180, 350, 538, 676, 774, 1181, 1226, 1242
MluNI TGGCCA 1 cut(s) 1095
MlyI GAGTC 4 cut(s) 232, 499, 898, 986
MmeI TCCRAC 1 cut(s) 580
Mox20I TGGCCA 1 cut(s) 1095
MroXI GAANNNNTTC 1 cut(s) 1245
MscI TGGCCA 1 cut(s) 1095
MseI TTAA 4 cut(s) 276, 648, 1146, 1179
MslI CAYNNNNRTG 3 cut(s) 315, 708, 793
Msp20I TGGCCA 1 cut(s) 1095
MspA1I CMGCKG 2 cut(s) 218, 455
MspI CCGG 3 cut(s) 91, 144, 816
MspR9I CCNGG 4 cut(s) 91, 132, 614, 1092
Mva1269I GAATGC 1 cut(s) 908
MvaI CCWGG 3 cut(s) 132, 614, 1092
MwoI GCNNNNNNNGC 6 cut(s) 21, 34, 168, 461, 846, 1294
NciI CCSGG 1 cut(s) 91
NcoI CCATGG 1 cut(s) 703
NdeII GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
NheI GCTAGC 1 cut(s) 167
NlaIV GGNNCC 3 cut(s) 89, 95, 814
NmeAIII GCCGAG 2 cut(s) 236, 290
NmuCI GTSAC 2 cut(s) 491, 624
NspI RCATGY 3 cut(s) 295, 686, 798
NspV TTCGAA 1 cut(s) 251
PaeI GCATGC 1 cut(s) 295
PciI ACATGT 1 cut(s) 682
PctI GAATGC 1 cut(s) 908
PdmI GAANNNNTTC 1 cut(s) 1245
PfeI GAWTC 4 cut(s) 62, 484, 695, 1170
PflMI CCANNNNNTGG 3 cut(s) 919, 1102, 1133
PkrI GCNGC 4 cut(s) 39, 58, 217, 1299
PleI GAGTC 4 cut(s) 232, 498, 897, 986
PpsI GAGTC 4 cut(s) 232, 498, 897, 986
Ppu21I YACGTR 1 cut(s) 804
PscI ACATGT 1 cut(s) 682
Psp124BI GAGCTC 1 cut(s) 143
Psp6I CCWGG 3 cut(s) 130, 612, 1090
PspFI CCCAGC 1 cut(s) 919
PspGI CCWGG 3 cut(s) 130, 612, 1090
PspN4I GGNNCC 3 cut(s) 89, 95, 814
PspPI GGNCC 1 cut(s) 87
PsrI GAACNNNNNNTAC 2 cut(s) 1252, 1284
PstNI CAGNNNCTG 1 cut(s) 919
PsuI RGATCY 5 cut(s) 388, 573, 812, 952, 979
PvuII CAGCTG 2 cut(s) 218, 455
RsaI GTAC 6 cut(s) 499, 802, 1030, 1041, 1107, 1261
RsaNI GTAC 6 cut(s) 498, 801, 1029, 1040, 1106, 1260
RseI CAYNNNNRTG 3 cut(s) 315, 708, 793
SacI GAGCTC 1 cut(s) 143
SaqAI TTAA 4 cut(s) 276, 648, 1146, 1179
SatI GCNGC 4 cut(s) 38, 57, 216, 1298
Sau3AI GATC 8 cut(s) 388, 573, 592, 602, 812, 952, 979, 1156
Sau96I GGNCC 1 cut(s) 87
ScaI AGTACT 1 cut(s) 1261
SchI GAGTC 4 cut(s) 232, 499, 898, 986
ScrFI CCNGG 4 cut(s) 91, 132, 614, 1092
SduI GDGCHC 2 cut(s) 143, 936
SexAI ACCWGGT 1 cut(s) 130
SfaNI GCATC 4 cut(s) 307, 358, 644, 673
SfuI TTCGAA 1 cut(s) 251
SinI GGWCC 1 cut(s) 87
SmiMI CAYNNNNRTG 3 cut(s) 315, 708, 793
SmlI CTYRAG 1 cut(s) 10
SmoI CTYRAG 1 cut(s) 10
SphI GCATGC 1 cut(s) 295
Sse9I AATT 8 cut(s) 180, 350, 538, 676, 774, 1181, 1226, 1242
SsiI CCGC 3 cut(s) 37, 56, 147
SspI AATATT 2 cut(s) 564, 836
SspMI CTAG 4 cut(s) 168, 966, 996, 1142
SstI GAGCTC 1 cut(s) 143
StyD4I CCNGG 4 cut(s) 89, 130, 612, 1090
StyI CCWWGG 1 cut(s) 703
TaaI ACNGT 3 cut(s) 497, 1033, 1259
TaiI ACGT 4 cut(s) 444, 463, 806, 1213
TaqI TCGA 3 cut(s) 124, 137, 251
TasI AATT 8 cut(s) 180, 350, 538, 676, 774, 1181, 1226, 1242
TatI WGTACW 1 cut(s) 1259
TauI GCSGC 2 cut(s) 40, 59
TfiI GAWTC 4 cut(s) 62, 484, 695, 1170
Tru1I TTAA 4 cut(s) 276, 648, 1146, 1179
Tru9I TTAA 4 cut(s) 276, 648, 1146, 1179
TscAI CASTG 2 cut(s) 115, 1195
TseFI GTSAC 2 cut(s) 491, 624
TseI GCWGC 2 cut(s) 215, 1297
Tsp45I GTSAC 2 cut(s) 491, 624
TspDTI ATGAA 5 cut(s) 90, 540, 963, 1238, 1290
TspGWI ACGGA 1 cut(s) 1163
TspRI CASTG 2 cut(s) 115, 1195
Van91I CCANNNNNTGG 3 cut(s) 919, 1102, 1133
VpaK11BI GGWCC 1 cut(s) 87
XapI RAATTY 4 cut(s) 180, 350, 1181, 1226
XbaI TCTAGA 1 cut(s) 965
XceI RCATGY 3 cut(s) 295, 686, 798
XmnI GAANNNNTTC 1 cut(s) 1245
XspI CTAG 4 cut(s) 168, 966, 996, 1142
ZrmI AGTACT 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.