Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001890

Physical Location & Seq

Genomic Coordinates Reverse (-)

6891304 .. 6899140

Gene Structure 7837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00223770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGCGCAAATTGAGCTTGCTAGGCCTGTGCCGGAGGCGTTTGGTTTCGTCATTGGCCGGAGAATCGCCCATTGATCAACGGAGGCTTTGCTCCTCGGTGACCGAGGCATTGTGTCGAACACAAGGTTATAGCAGCTCTTCTGGTTCCGTAGCTGGTTTCGCTACTTCGTTTGGGAATCGTTATTTCCATGCGTCAGGGTTTTGCTGCGCACCGGAACGAGACTACTACGAAACTCTTGGCGTTTCTCGGAGCGCAAGCAAAGATGAGATTAAGAAGGCTTTTCGCACGCTGGCCAAAAAATACCATCCTGATGCAAACAGGGACAATCCTTCTTATAAGAGAAAATTTCAAGAGATAAGAGAAGCTTATGAGAAGCAATCAAGTGGGTATACTGCTGGTGATGCAGAAGGTTTTAGATATAATTATCAAACACATGGTTCTACTGCTGATGCAGAGGGGTTTGGACATGGTTTTAAACCTCATTTCTCCAGTTCATTTCATAAAATATTCTCAGAGATCTTTGAACATGAATTCGATCAAGTTGCACCTGACATTCAGATGTGGTATCTGAAAATACAAAGGTCAGATCTAGGCTGTAGCTTGTGTTCAGGATGGTGTCCCACTGTGGGCCAGCAGCTTGGGTCCAACTTCCTGGTTCAGGGTTTGGAGTCAAGGAGTGGTGGCTGGAGGCTTGGAACTTGGGGTCTGCGTCTGGGTTTGGTCAGAGTCCAGAATGGGCGTGGCTATCCACTAAAGGCCAAGACAAAAGTGTGTCCTATTTGTAGAGGTATTGGGAGAGTTACAATTCCTCCGTTCACATCAACATGCAGTACTTGTAAAGGGTCAGGCCAAATAATCAAGGAACATTGTATGTCATGTGGAGGATTAGGGATAGTTGAAGGTGCAAGAGAGGTTGAAGTTACCATCCCAGCAGGTGTGGATTCTGGAGATACAATCCGTGTACCAGAGGCTGGGAATAGTGGGCCACGGGGAAGTCAGCCAGGCTGGTTATACATTAAGCTAAAGGTTGCTGAAGATCCTGTTTTTGCTAGAGATGGTGCAGATGTTTATGTGGACTCTAATATCAGCTTTACTCAAGCTATTCTTGGTGGTAAGGTTGAGGTGCCAACTTTAACCGGGAAGACAGAAGTAAAAATACCAAAGGGGGTTCAGCCTGGAGAACACGTGGTACTAAGAGGCAAAGGACTACCGAAGCATGGTTTCCTAGTTCACCATGGAGACCAATATGTTTGCTTTCGAGTCCAGTTTCCGACAATAGCTTCGATTCAATGGATGAGTGGTTGCAAGATTGGATCTTCCACCTCCTGCTCCTTTACATGGGGGAGGACTAAGGACTGCTTGAAACTTTTTCCTGATATGGTTAGCCAGTACTCCCTGAAATCAAGTCAGAACCCAGAACCCTGGTCCAAAGTTCTGGCTGTGACTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

483

Amino Acids

52.92

Weight (kDa)

9.14

Isoelectric Point (pI)

31.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	74 - 124	1.2e-19	DnaJ domain
DnaJ_CXXCXGXG	PF00684	245 - 295	1.9e-06	DnaJ central domain
DnaJ_C	PF01556	278 - 424	4.7e-39	DnaJ C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28210 AT1G28210 AT1G28210
fragaria_vesca	FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030 FvH4_5g36030
malus_domestica	MD00G1135700.v1.1 MD00G1135800.v1.1 MD00G1136000.v1.1 MD15G1379600.v1.1
prunus_persica	Prupe.1G525700_v2.0.a1
pyrus_communis	pycom08g16440 pycom15g34020
rosa_chinensis	RchiOBHm_Chr7g0237761
rosa_laevigata	RLG00000000969
rosa_multiflora	Rmu_ssc0000067.1_g000032
rosa_roxburghii	Rroxscaffold_3G00223770
rosa_rugosa	Rorug07G0307900 Rorug07G0308000 Rorug07G0308100 Rorug07G0308200 Rorug07G0308300 Rorug07G0308400 Rorug07G0308500
rosa_samantha	Rh4BG131900 Rh5DG050200 Rh7AG463900 Rh7BG434000 Rh7CG480900 Rh7CG481100 Rh7DG449800
rosa_wichuraiana	Rw7G038380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AarI	CACCTGC	1 cut(s)	923
Acc16I	TGCGCA	2 cut(s)	5, 208
Acc36I	ACCTGC	1 cut(s)	923
AccB1I	GGYRCC	1 cut(s)	1123
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccI	GTMKAC	1 cut(s)	389
AclWI	GGATC	2 cut(s)	1031, 1321
AcoI	YGGCCR	2 cut(s)	54, 291
AcsI	RAATTY	2 cut(s)	344, 530
AcuI	CTGAAG	1 cut(s)	1053
AcvI	CACGTG	1 cut(s)	1186
AfaI	GTAC	4 cut(s)	832, 963, 1191, 1391
AfiI	CCNNNNNNNGG	5 cut(s)	626, 658, 971, 1217, 1338
AflIII	ACRYGT	1 cut(s)	1183
AgsI	TTSAA	6 cut(s)	350, 524, 899, 917, 1289, 1363
AjnI	CCWGG	4 cut(s)	651, 1000, 1174, 1421
Alw26I	GTCTC	2 cut(s)	213, 1233
AlwI	GGATC	2 cut(s)	1031, 1321
AlwNI	CAGNNNCTG	1 cut(s)	971
AoxI	GGCC	7 cut(s)	22, 54, 291, 628, 756, 847, 983
ApeKI	GCWGC	3 cut(s)	132, 204, 634
ApoI	RAATTY	2 cut(s)	344, 530
ArsI	GACNNNNNNTTYG	2 cut(s)	1264, 1296
AspLEI	GCGC	3 cut(s)	6, 209, 254
AspS9I	GGNCC	4 cut(s)	628, 642, 983, 1425
AsuC2I	CCSGG	1 cut(s)	1138
AsuHPI	GGTGA	3 cut(s)	109, 410, 1223
AvaII	GGWCC	2 cut(s)	642, 1425
BalI	TGGCCA	1 cut(s)	293
BanI	GGYRCC	1 cut(s)	1123
BarI	GAAGNNNNNNTAC	2 cut(s)	1140, 1172
BbrPI	CACGTG	1 cut(s)	1186
BbsI	GAAGAC	1 cut(s)	1148
BbvI	GCAGC	3 cut(s)	144, 191, 646
BccI	CCATC	4 cut(s)	312, 606, 932, 1049
BcgI	CGANNNNNNTGC	2 cut(s)	524, 558
BciT130I	CCWGG	4 cut(s)	653, 1002, 1176, 1423
BclI	TGATCA	1 cut(s)	73
BcnI	CCSGG	1 cut(s)	1138
BcoDI	GTCTC	2 cut(s)	213, 1233
BfaI	CTAG	4 cut(s)	20, 590, 1050, 1226
BfmI	CTRYAG	1 cut(s)	595
BfuAI	ACCTGC	1 cut(s)	923
BglII	AGATCT	2 cut(s)	516, 586
BisI	GCNGC	3 cut(s)	133, 205, 635
BlsI	GCNGC	3 cut(s)	134, 206, 636
BmcAI	AGTACT	2 cut(s)	832, 1391
Bme1390I	CCNGG	5 cut(s)	653, 1002, 1138, 1176, 1423
Bme18I	GGWCC	2 cut(s)	642, 1425
BmgT120I	GGNCC	4 cut(s)	628, 642, 983, 1425
BmiI	GGNNCC	3 cut(s)	145, 643, 1125
BmrFI	CCNGG	5 cut(s)	653, 1002, 1138, 1176, 1423
BmsI	GCATC	3 cut(s)	301, 391, 439
BpiI	GAAGAC	1 cut(s)	1148
BpmI	CTGGAG	4 cut(s)	472, 706, 966, 1197
BpuEI	CTTGAG	1 cut(s)	1080
BpuMI	CCSGG	1 cut(s)	1138
BsaAI	YACGTR	1 cut(s)	1186
BsaI	GGTCTC	1 cut(s)	1233
BsaJI	CCNNGG	5 cut(s)	93, 102, 986, 1234, 1421
BsaWI	WCCGGW	1 cut(s)	211
BsaXI	ACNNNNNCTCC	4 cut(s)	793, 823, 1170, 1200
Bsc4I	CCNNNNNNNGG	5 cut(s)	626, 658, 971, 1217, 1338
Bse1I	ACTGG	3 cut(s)	489, 1264, 1387
BseBI	CCWGG	4 cut(s)	653, 1002, 1176, 1423
BseDI	CCNNGG	5 cut(s)	93, 102, 986, 1234, 1421
BseGI	GGATG	4 cut(s)	304, 617, 924, 1299
BseLI	CCNNNNNNNGG	5 cut(s)	626, 658, 971, 1217, 1338
BseMII	CTCAG	1 cut(s)	525
BseNI	ACTGG	3 cut(s)	489, 1264, 1387
BseRI	GAGGAG	1 cut(s)	82
BseXI	GCAGC	3 cut(s)	144, 191, 646
BseYI	CCCAGC	2 cut(s)	928, 971
BsgI	GTGCAG	1 cut(s)	1080
BshFI	GGCC	7 cut(s)	24, 56, 293, 630, 758, 849, 985
BshNI	GGYRCC	1 cut(s)	1123
BsiSI	CCGG	4 cut(s)	31, 57, 212, 1137
BslFI	GGGAC	2 cut(s)	335, 603
BslI	CCNNNNNNNGG	5 cut(s)	626, 658, 971, 1217, 1338
BsmAI	GTCTC	2 cut(s)	213, 1233
BsmFI	GGGAC	2 cut(s)	335, 603
BsnI	GGCC	7 cut(s)	24, 56, 293, 630, 758, 849, 985
Bso31I	GGTCTC	1 cut(s)	1233
Bsp143I	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
Bsp19I	CCATGG	1 cut(s)	1234
BspANI	GGCC	7 cut(s)	24, 56, 293, 630, 758, 849, 985
BspCNI	CTCAG	1 cut(s)	524
BspLI	GGNNCC	3 cut(s)	145, 643, 1125
BspMI	ACCTGC	1 cut(s)	923
BspPI	GGATC	2 cut(s)	1031, 1321
BspQI	GCTCTTC	1 cut(s)	142
BspT107I	GGYRCC	1 cut(s)	1123
BspTNI	GGTCTC	1 cut(s)	1233
BsrI	ACTGG	3 cut(s)	489, 1264, 1387
BssECI	CCNNGG	5 cut(s)	93, 102, 986, 1234, 1421
BssMI	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
BssNAI	GTATAC	1 cut(s)	390
BssT1I	CCWWGG	1 cut(s)	1234
Bst1107I	GTATAC	1 cut(s)	390
Bst2UI	CCWGG	4 cut(s)	653, 1002, 1176, 1423
Bst4CI	ACNGT	1 cut(s)	625
Bst6I	CTCTTC	1 cut(s)	142
BstBAI	YACGTR	1 cut(s)	1186
BstC8I	GCNNGC	5 cut(s)	17, 256, 287, 291, 632
BstDEI	CTNAG	3 cut(s)	511, 1193, 1350
BstDSI	CCRYGG	2 cut(s)	986, 1234
BstEII	GGTNACC	1 cut(s)	97
BstENI	CCTNNNNNAGG	1 cut(s)	656
BstF5I	GGATG	4 cut(s)	304, 617, 924, 1299
BstHHI	GCGC	3 cut(s)	6, 209, 254
BstKTI	GATC	6 cut(s)	76, 519, 538, 589, 1039, 1316
BstMAI	GTCTC	2 cut(s)	213, 1233
BstMBI	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
BstMWI	GCNNNNNNNGC	4 cut(s)	12, 21, 158, 401
BstNI	CCWGG	4 cut(s)	653, 1002, 1176, 1423
BstNSI	RCATGY	1 cut(s)	828
BstPI	GGTNACC	1 cut(s)	97
BstSCI	CCNGG	5 cut(s)	651, 1000, 1136, 1174, 1421
BstSFI	CTRYAG	1 cut(s)	595
BstV1I	GCAGC	3 cut(s)	144, 191, 646
BstV2I	GAAGAC	1 cut(s)	1148
BstX2I	RGATCY	4 cut(s)	516, 586, 1036, 1313
BstXI	CCANNNNNNTGG	4 cut(s)	638, 652, 1422, 1435
BstYI	RGATCY	4 cut(s)	516, 586, 1036, 1313
BstZ17I	GTATAC	1 cut(s)	390
BsuRI	GGCC	7 cut(s)	24, 56, 293, 630, 758, 849, 985
BtgI	CCRYGG	2 cut(s)	986, 1234
BtsCI	GGATG	4 cut(s)	304, 617, 924, 1299
BtsIMutI	CAGTG	1 cut(s)	621
BveI	ACCTGC	1 cut(s)	923
Cac8I	GCNNGC	5 cut(s)	17, 256, 287, 291, 632
CaiI	CAGNNNCTG	1 cut(s)	971
CfoI	GCGC	3 cut(s)	6, 209, 254
Cfr13I	GGNCC	4 cut(s)	628, 642, 983, 1425
CseI	GACGC	2 cut(s)	180, 698
Csp6I	GTAC	4 cut(s)	831, 962, 1190, 1390
CviAII	CATG	9 cut(s)	188, 434, 467, 527, 825, 876, 1217, 1235, 1338
CviQI	GTAC	4 cut(s)	831, 962, 1190, 1390
DdeI	CTNAG	3 cut(s)	511, 1193, 1350
DpnI	GATC	6 cut(s)	75, 518, 537, 588, 1038, 1315
DpnII	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
DraI	TTTAAA	1 cut(s)	475
EaeI	YGGCCR	2 cut(s)	54, 291
Eam1104I	CTCTTC	1 cut(s)	142
EarI	CTCTTC	1 cut(s)	142
Eco130I	CCWWGG	1 cut(s)	1234
Eco147I	AGGCCT	1 cut(s)	24
Eco31I	GGTCTC	1 cut(s)	1233
Eco47I	GGWCC	2 cut(s)	642, 1425
Eco57I	CTGAAG	1 cut(s)	1053
Eco72I	CACGTG	1 cut(s)	1186
Eco91I	GGTNACC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	656
EcoO65I	GGTNACC	1 cut(s)	97
EcoRI	GAATTC	1 cut(s)	530
EcoRII	CCWGG	4 cut(s)	651, 1000, 1174, 1421
EcoT14I	CCWWGG	1 cut(s)	1234
ErhI	CCWWGG	1 cut(s)	1234
FaeI	CATG	9 cut(s)	191, 437, 470, 530, 828, 879, 1220, 1238, 1341
FalI	AAGNNNNNCTT	6 cut(s)	349, 381, 1089, 1121, 1343, 1375
FaqI	GGGAC	2 cut(s)	335, 603
FatI	CATG	9 cut(s)	187, 433, 466, 526, 824, 875, 1216, 1234, 1337
FbaI	TGATCA	1 cut(s)	73
FblI	GTMKAC	1 cut(s)	389
Fnu4HI	GCNGC	3 cut(s)	133, 205, 635
FokI	GGATG	4 cut(s)	291, 624, 911, 1306
Fsp4HI	GCNGC	3 cut(s)	133, 205, 635
FspBI	CTAG	4 cut(s)	20, 590, 1050, 1226
FspI	TGCGCA	2 cut(s)	5, 208
GlaI	GCGC	3 cut(s)	5, 208, 253
GluI	GCNGC	3 cut(s)	133, 205, 635
GsaI	CCCAGC	2 cut(s)	932, 975
GsuI	CTGGAG	4 cut(s)	472, 706, 966, 1197
HaeIII	GGCC	7 cut(s)	24, 56, 293, 630, 758, 849, 985
HapII	CCGG	4 cut(s)	31, 57, 212, 1137
HgaI	GACGC	2 cut(s)	180, 698
HhaI	GCGC	3 cut(s)	6, 209, 254
Hin1II	CATG	9 cut(s)	191, 437, 470, 530, 828, 879, 1220, 1238, 1341
Hin6I	GCGC	3 cut(s)	4, 207, 252
HinP1I	GCGC	3 cut(s)	4, 207, 252
HindIII	AAGCTT	1 cut(s)	363
HinfI	GANTC	8 cut(s)	62, 175, 668, 726, 941, 1076, 1260, 1285
HpaII	CCGG	4 cut(s)	31, 57, 212, 1137
HphI	GGTGA	3 cut(s)	109, 410, 1223
Hpy166II	GTNNAC	5 cut(s)	390, 816, 962, 1075, 1231
Hpy188I	TCNGA	8 cut(s)	249, 514, 558, 570, 586, 725, 1272, 1410
Hpy188III	TCNNGA	7 cut(s)	308, 350, 609, 730, 945, 1373, 1449
Hpy8I	GTNNAC	5 cut(s)	390, 816, 962, 1075, 1231
HpyAV	CCTTC	4 cut(s)	268, 339, 401, 893
HpyCH4III	ACNGT	1 cut(s)	625
HpyCH4IV	ACGT	1 cut(s)	1185
HpyCH4V	TGCA	8 cut(s)	314, 404, 452, 545, 828, 905, 1061, 1305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	12, 21, 158, 401
HpyF3I	CTNAG	3 cut(s)	511, 1193, 1350
HpySE526I	ACGT	1 cut(s)	1185
Hsp92II	CATG	9 cut(s)	191, 437, 470, 530, 828, 879, 1220, 1238, 1341
HspAI	GCGC	3 cut(s)	4, 207, 252
Ksp22I	TGATCA	1 cut(s)	73
Kzo9I	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
LguI	GCTCTTC	1 cut(s)	142
LmnI	GCTCC	3 cut(s)	95, 249, 1334
Lsp1109I	GCAGC	3 cut(s)	144, 191, 646
LweI	GCATC	3 cut(s)	301, 391, 439
MaeI	CTAG	4 cut(s)	20, 590, 1050, 1226
MaeII	ACGT	1 cut(s)	1185
MaeIII	GTNAC	4 cut(s)	97, 799, 919, 1441
MalI	GATC	6 cut(s)	75, 518, 537, 588, 1038, 1315
MboI	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
MboII	GAAGA	4 cut(s)	129, 1046, 1153, 1308
MflI	RGATCY	4 cut(s)	516, 586, 1036, 1313
MlsI	TGGCCA	1 cut(s)	293
MluCI	AATT	5 cut(s)	8, 344, 421, 530, 804
MluNI	TGGCCA	1 cut(s)	293
MlyI	GAGTC	4 cut(s)	677, 735, 1070, 1269
MmeI	TCCRAC	2 cut(s)	669, 1295
Mox20I	TGGCCA	1 cut(s)	293
MscI	TGGCCA	1 cut(s)	293
MseI	TTAA	4 cut(s)	270, 474, 1017, 1133
MslI	CAYNNNNRTG	3 cut(s)	309, 557, 823
Msp20I	TGGCCA	1 cut(s)	293
MspI	CCGG	4 cut(s)	31, 57, 212, 1137
MspR9I	CCNGG	5 cut(s)	653, 1002, 1138, 1176, 1423
MvaI	CCWGG	4 cut(s)	653, 1002, 1176, 1423
MwoI	GCNNNNNNNGC	4 cut(s)	12, 21, 158, 401
NciI	CCSGG	1 cut(s)	1138
NcoI	CCATGG	1 cut(s)	1234
NdeII	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
NlaIII	CATG	9 cut(s)	191, 437, 470, 530, 828, 879, 1220, 1238, 1341
NlaIV	GGNNCC	3 cut(s)	145, 643, 1125
NmuCI	GTSAC	2 cut(s)	97, 1441
NsbI	TGCGCA	2 cut(s)	5, 208
NspI	RCATGY	1 cut(s)	828
PaqCI	CACCTGC	1 cut(s)	923
PceI	AGGCCT	1 cut(s)	24
PciSI	GCTCTTC	1 cut(s)	142
PfeI	GAWTC	4 cut(s)	62, 175, 941, 1285
PflMI	CCANNNNNTGG	1 cut(s)	971
PkrI	GCNGC	3 cut(s)	134, 206, 636
PleI	GAGTC	4 cut(s)	676, 734, 1070, 1268
PmaCI	CACGTG	1 cut(s)	1186
PmlI	CACGTG	1 cut(s)	1186
PpsI	GAGTC	4 cut(s)	676, 734, 1070, 1268
Ppu21I	YACGTR	1 cut(s)	1186
PsiI	TTATAA	1 cut(s)	336
Psp6I	CCWGG	4 cut(s)	651, 1000, 1174, 1421
PspCI	CACGTG	1 cut(s)	1186
PspEI	GGTNACC	1 cut(s)	97
PspFI	CCCAGC	2 cut(s)	928, 971
PspGI	CCWGG	4 cut(s)	651, 1000, 1174, 1421
PspN4I	GGNNCC	3 cut(s)	145, 643, 1125
PspPI	GGNCC	4 cut(s)	628, 642, 983, 1425
PsrI	GAACNNNNNNTAC	4 cut(s)	589, 621, 1173, 1205
PstNI	CAGNNNCTG	1 cut(s)	971
PsuI	RGATCY	4 cut(s)	516, 586, 1036, 1313
RsaI	GTAC	4 cut(s)	832, 963, 1191, 1391
RsaNI	GTAC	4 cut(s)	831, 962, 1190, 1390
RseI	CAYNNNNRTG	3 cut(s)	309, 557, 823
SapI	GCTCTTC	1 cut(s)	142
SaqAI	TTAA	4 cut(s)	270, 474, 1017, 1133
SatI	GCNGC	3 cut(s)	133, 205, 635
Sau3AI	GATC	6 cut(s)	73, 516, 535, 586, 1036, 1313
Sau96I	GGNCC	4 cut(s)	628, 642, 983, 1425
ScaI	AGTACT	2 cut(s)	832, 1391
SchI	GAGTC	4 cut(s)	677, 735, 1070, 1269
ScrFI	CCNGG	5 cut(s)	653, 1002, 1138, 1176, 1423
SfaNI	GCATC	3 cut(s)	301, 391, 439
SfcI	CTRYAG	1 cut(s)	595
SinI	GGWCC	2 cut(s)	642, 1425
SmiMI	CAYNNNNRTG	3 cut(s)	309, 557, 823
SmlI	CTYRAG	1 cut(s)	1095
SmoI	CTYRAG	1 cut(s)	1095
Sse9I	AATT	5 cut(s)	8, 344, 421, 530, 804
SseBI	AGGCCT	1 cut(s)	24
SspI	AATATT	1 cut(s)	507
SspMI	CTAG	4 cut(s)	20, 590, 1050, 1226
StuI	AGGCCT	1 cut(s)	24
StyD4I	CCNGG	5 cut(s)	651, 1000, 1136, 1174, 1421
StyI	CCWWGG	1 cut(s)	1234
TaaI	ACNGT	1 cut(s)	625
TaiI	ACGT	1 cut(s)	1188
TaqI	TCGA	4 cut(s)	115, 534, 1258, 1283
TaqII	GACCGA	1 cut(s)	116
TasI	AATT	5 cut(s)	8, 344, 421, 530, 804
TatI	WGTACW	2 cut(s)	830, 1389
TfiI	GAWTC	4 cut(s)	62, 175, 941, 1285
Tru1I	TTAA	4 cut(s)	270, 474, 1017, 1133
Tru9I	TTAA	4 cut(s)	270, 474, 1017, 1133
TscAI	CASTG	1 cut(s)	628
TseFI	GTSAC	2 cut(s)	97, 1441
TseI	GCWGC	3 cut(s)	132, 204, 634
Tsp45I	GTSAC	2 cut(s)	97, 1441
TspDTI	ATGAA	3 cut(s)	483, 488, 543
TspGWI	ACGGA	4 cut(s)	94, 136, 801, 947
TspRI	CASTG	1 cut(s)	628
Van91I	CCANNNNNTGG	1 cut(s)	971
VpaK11BI	GGWCC	2 cut(s)	642, 1425
XagI	CCTNNNNNAGG	1 cut(s)	656
XapI	RAATTY	2 cut(s)	344, 530
XceI	RCATGY	1 cut(s)	828
XcmI	CCANNNNNNNNNTGG	1 cut(s)	737
XmiI	GTMKAC	1 cut(s)	389
XspI	CTAG	4 cut(s)	20, 590, 1050, 1226
ZrmI	AGTACT	2 cut(s)	832, 1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.