Rorug07G0308500

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001890
Physical Location & Seq
Forward (+)
30986906 .. 30993916
7011 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0308500.1

Sequence Viewer

Length: 3291 bp
ATGGCGAAGAACGACGCGTCGTCTCTGGGATCGGTGGACGAGTTCCTGAAGCGGTGCGAGCAATCCGGCGATGCCGCGTACTCTGCTCTGAGATCAGTGCTGGAGCGTCTCGAGGATCCGAAAACCCGAACTCAAGCTCGGATCTTCCTCTCCAACCTCCAGAAGCGCTTCCCTACCAAGGACGACTGCGATCACTGCTTCCGCACCTATCATTTCCAGATTGAGGACATCTTCTTCGATCAGTATCAAGGTTACCAGGGTAGGAAGAAGCTGACAATGATGGTTATCCCTAGCATTTTTGTTCCAGAAGATTGGTCCTTCACTTTTTTCGAAGGACTAAACAGACATCCGGACTCTATCTTTAAGGACAAGTCACTTGCTGAGCTTGGCTGTGGAAATGGTTGGATATCCATTGCCATTGCTGAGAAGTGGTTGCCATCCAAGGTGTATGGACTCGATATCAATCCTAGAGCAGTCAAGATGTCATGGATAAATTTGTATCTAAATGCTTTGGACGAGGAAGGTCGGCCCGTCTATGATGCTGAGAAAAAGACCTTGCTGGACAGGGTTGAGTTTCATGAATCAGATCTCCTATCTTATTGCAGAGACAATGACATTCAACTAGAACGAATTGTTGGTTGCATCCCTCAGATTCTTAACCCGAATCCAGATGCAATGTCTAAGATGATAACTGAGAATGCAAGTGAGGAATTTCTACATTCATTGAGCAATTATTGTGCGCTTCAGGGTTTTCTTGAGGATCAATTTGGCTTAGGTCTAATTGCTAGGGCAGTGGAGGAAGGAATAGCTGTCATCAAACCTATGGGGATAATGATCTTCAACATGGGAGGGCGTCCAGGACAAGCTGTTTGTAAACGCTTGTTTGAACGCCGTGGCTTTCATGTTAACAAGCTTTGGCAGACTAAAATTCTTCAGGCTGCAGACACAGATATATCAGCATTAGTTGAAATTGAAAAGAACAGTCCACACCGTTTTGAGTTCTTCATGGGACTTTCTGGAGATCAGCCTATTTGTGCTCGAACAGCATGGGCATATGGAAACGCCGGTGGTCGAATCTCGCACGCTTTATCAGTTTACAGCTGTCAACTCCGCCAGCCAAATCAGGTCAAGACAATTTTTGAGTTTCTTAAGAATGGCTTCCATGACATCAGCAGTTCTTTAGATTTATCATTTGAAGATGATTCAGTGGCTGATGAGAAGATTCCCTTCCTAGCTTATCTTTCCAGTGTTCTGAAAGGGAGTTCTTTCTGCAAGTATGAACCACCAGCTGGAAGCAAACATTTTCGCAACCTCATTGCTGGGTTTCTGAAAACGTATCACCGTGTTCCACTCACTACTGATAATGTTGTTGTCTTTCCTTCAAGGGCCGTAGCAATAGAAAATGCTCTTCGGTTGTTCTCACCTCGTCTTGCAATTGTTGATGAACATCTGACGCGCCACCTTCCAAGGAACTGGTTAACATCTTTAGCAGTTAAGTGTGCAGGAACTGATAATCCTGCAGAGGATTCACTTACAGTTATTGAAGCGCCTCGACAGTCTGATTTGATAATAGAGCTTATAAGGAAGTTGAAGCCACAGGTGGTGGTTACTGGGATAGCTGATTATGAGTCTGTTACTAGTTCAGCCTTTGTACACCTTTTAGATGTTACAAGAGAAGTTGGATCTCGTCTTTTCTTAGACATATCTGATCATTTTGAGCTATCCAGCCTTCCAAGTTCCAATGGAGTCCTCAAATATATAGGGGGGAATGTTCTGCCATCCCATGCAGCAATTATATGTGGCCTAGTGAAAAACAAGGTTTATTCAGATCTAGAAGTAGCTTTTGTAATTTCAGAGGAGGAAAATATTTTCAAGGCCTTGTCAAAGACTGTTGAACTACTAGAAGGGAGTACAGCACCAATTAGTCAAGGTTATTATGGTTGTCTTTTTCATGAACTTTTAGCTTTTCAACTTGCTGACAGACATCCACCTCCACAGAGGGAATGCACATCAGTTAAATCAGCAGAGATGATTGGTTTTGCTAGTTCAGCAAACTCGGTCCTTAATAATGCTGAGTTGGCAATTAATGAGGCAGGGAACTCTTCCCTGATTCATATGGACGTGGATCAAAGCTTCTTACATGTACCATCACCTGTCAATGCTGCAATTTTTGAAAGCTTTGCCAGACAGAACATAGCTGAGTCAGAAATAGATGTCACCACTAGCATTAAGGAATTCATAAAGAGCAATTATGGTTACCCACTTGATAGCAACACCGAATTTATATATGCTGACAGCTCGCTAGCTCTGTTTAACAAGTTGGTTCTTTGTTGCATACAAGAAGGGGGGACATTGTGCTTTCCTTCTGGCTCAAATGGAAACTATGTCTCTGCTGCAAAATTTTTGAAAGCAAATATTGTAAATATACCTACAAAGATCGAAGAAGGCTTTAAACTGACAGAAAAGGGTCTTTATGGAGTCCTAGAGACTCTGGATAAACCATGGGTATACATTTCTGGACCAACAATTAACCCAACTGGTGCGCTATACAGCAACAAAGAGATTGAAAATTTACTGTCTACCTGTGCCAAATTTGGGGCTAGGGTTGTGATTGACACTTCATTCTCGGGTTTGGAATTTGACCCTGAGGGTTGGGGTGGCTGGAGTCTGGTGGACAGTTTGTCAAAGTTATATTCTTCTAGCAAACCATCTTTTTGTGTCTCTCTGCTCGGGGGATTGTCTTTGAAGATGCTGAGTGGGGGACTCAAATTTGGGTTTCTGGTTCTGAACCAGTCTGCTGTGGTGGAAACATTTTATAGCTTTCCAGGATTAAGCAAACCTCATAACACTGTTAAATATGCCGTTAAGAAACTACTGGGTCTGAGAGAGCAGAAATCAGGAGATCTTTGGGATGCCATTGCAGAACAGATTAGAAATTTGAAGAGTCGATCCAAGCGCTTGAAGGAGACACTGGAGAAGTGTGGATGGGATGTGCTTGAATCTAGTGGTGGTGTTTCCATGGTGGCCAAGCCCTCATCTTATTTGAATAAGACTGTTAAGTTCAAGCAATATAAAGATGGAGGCAGCACTGAAGATGGAACAGTGCATGAAGTTAAGCTTGATGACTCTAATATCAGGGAGGTCATTCACAAGTCTACTGGCTTGTGCATCAATAGTGGCTCCTGGACTGGAATTCCTGGCTATTGTCGTTTCACCATTGCTCTTGAAGAAAGTGAGTTTGAGCGGGCATTGGATTGCATTGTTCAATTTAAGAAGACCATCAGTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

1096

Amino Acids

121.73

Weight (kDa)

5.8

Isoelectric Point (pI)

39.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 738 - 1086 1.4e-19 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1580
AccB7I CCANNNNNTGG 1 cut(s) 1289
AccBSI CCGCTC 1 cut(s) 3244
AccI GTMKAC 3 cut(s) 2508, 2579, 3155
AccII CGCG 3 cut(s) 17, 77, 1456
AccIII TCCGGA 1 cut(s) 349
AciI CCGC 5 cut(s) 52, 75, 202, 1111, 3244
AclWI GGATC 8 cut(s) 37, 110, 123, 149, 768, 1690, 2133, 2943
AcoI YGGCCR 1 cut(s) 3024
AcuI CTGAAG 4 cut(s) 68, 728, 917, 3111
AcyI GRCGYC 1 cut(s) 853
AfaI GTAC 4 cut(s) 80, 1653, 1912, 2145
AfeI AGCGCT 2 cut(s) 167, 2957
AfiI CCNNNNNNNGG 4 cut(s) 178, 223, 1289, 2595
AflII CTTAAG 1 cut(s) 1148
AflIII ACRYGT 2 cut(s) 15, 2140
AhdI GACNNNNNGTC 2 cut(s) 19, 2680
AhlI ACTAGT 1 cut(s) 1637
AjiI CACGTC 1 cut(s) 2122
AjnI CCWGG 5 cut(s) 255, 856, 2824, 3182, 3196
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
AloI GAACNNNNNNTCC 2 cut(s) 1498, 1530
Alw21I GWGCWC 1 cut(s) 1039
Alw26I GTCTC 7 cut(s) 27, 113, 600, 2392, 2480, 2725, 2960
AlwI GGATC 8 cut(s) 37, 110, 123, 149, 768, 1690, 2133, 2943
AlwNI CAGNNNCTG 3 cut(s) 1211, 1508, 3288
Ama87I CYCGRG 3 cut(s) 110, 2626, 2729
Aor13HI TCCGGA 1 cut(s) 349
Aor51HI AGCGCT 2 cut(s) 167, 2957
AoxI GGCC 5 cut(s) 527, 1386, 1801, 1875, 3024
ApeKI GCWGC 5 cut(s) 938, 1787, 2162, 2393, 3084
ArsI GACNNNNNNTTYG 4 cut(s) 218, 250, 852, 884
AseI ATTAAT 1 cut(s) 2085
Asp700I GAANNNNTTC 2 cut(s) 167, 1157
AspLEI GCGC 6 cut(s) 168, 742, 1458, 1549, 2545, 2958
AspS9I GGNCC 5 cut(s) 315, 528, 1386, 2059, 2519
AsuHPI GGTGA 5 cut(s) 1331, 1413, 2142, 2209, 3205
AsuII TTCGAA 1 cut(s) 330
AsuNHI GCTAGC 1 cut(s) 2302
AvaI CYCGRG 3 cut(s) 110, 2626, 2729
AvaII GGWCC 3 cut(s) 315, 2059, 2519
AxyI CCTNAGG 1 cut(s) 2646
BalI TGGCCA 1 cut(s) 3026
BamHI GGATCC 1 cut(s) 115
BbsI GAAGAC 1 cut(s) 3281
Bbv12I GWGCWC 1 cut(s) 1039
BbvI GCAGC 5 cut(s) 925, 1799, 2149, 2380, 3096
BccI CCATC 9 cut(s) 274, 445, 1786, 2155, 2716, 2979, 3071, 3089, 3287
BceAI ACGGC 3 cut(s) 876, 1373, 2846
BciT130I CCWGG 5 cut(s) 257, 858, 2826, 3184, 3198
BclI TGATCA 1 cut(s) 1708
BcoDI GTCTC 7 cut(s) 27, 113, 600, 2392, 2480, 2725, 2960
BcuI ACTAGT 1 cut(s) 1637
BfmI CTRYAG 2 cut(s) 939, 1518
BfoI RGCGCY 3 cut(s) 169, 1550, 2959
BfrI CTTAAG 1 cut(s) 1148
BglII AGATCT 3 cut(s) 586, 1828, 2902
BisI GCNGC 6 cut(s) 75, 939, 1788, 2163, 2394, 3085
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 6 cut(s) 76, 940, 1789, 2164, 2395, 3086
Bme1390I CCNGG 5 cut(s) 257, 858, 2826, 3184, 3198
Bme18I GGWCC 3 cut(s) 315, 2059, 2519
BmeRI GACNNNNNGTC 2 cut(s) 19, 2680
BmeT110I CYCGRG 3 cut(s) 110, 2626, 2729
BmgBI CACGTC 1 cut(s) 2122
BmgT120I GGNCC 5 cut(s) 315, 528, 1386, 2059, 2519
BmiI GGNNCC 2 cut(s) 117, 3181
BmrFI CCNGG 5 cut(s) 257, 858, 2826, 3184, 3198
BmrI ACTGGG 2 cut(s) 1620, 2885
BmsI GCATC 7 cut(s) 61, 529, 651, 661, 2739, 2902, 3177
BmtI GCTAGC 1 cut(s) 2306
BmuI ACTGGG 2 cut(s) 1620, 2885
BpiI GAAGAC 1 cut(s) 3281
BpmI CTGGAG 5 cut(s) 122, 143, 1038, 2683, 2993
Bpu10I CCTNAGC 1 cut(s) 772
Bpu1102I GCTNAGC 1 cut(s) 381
Bpu14I TTCGAA 1 cut(s) 330
BpuEI CTTGAG 2 cut(s) 117, 776
BsaBI GATNNNNATC 5 cut(s) 243, 284, 462, 833, 1446
BsaHI GRCGYC 1 cut(s) 853
BsaJI CCNNGG 7 cut(s) 177, 256, 441, 892, 1466, 2501, 3018
BsaWI WCCGGW 1 cut(s) 349
Bsc4I CCNNNNNNNGG 4 cut(s) 178, 223, 1289, 2595
Bse118I RCCGGY 1 cut(s) 1064
Bse1I ACTGG 9 cut(s) 1245, 1478, 1615, 2542, 2791, 2880, 2976, 3163, 3193
Bse21I CCTNAGG 1 cut(s) 2646
Bse3DI GCAATG 6 cut(s) 411, 417, 681, 1314, 2916, 3216
Bse8I GATNNNNATC 5 cut(s) 243, 284, 462, 833, 1446
BseAI TCCGGA 1 cut(s) 349
BseBI CCWGG 5 cut(s) 257, 858, 2826, 3184, 3198
BseDI CCNNGG 7 cut(s) 177, 256, 441, 892, 1466, 2501, 3018
BseGI GGATG 8 cut(s) 346, 437, 642, 1778, 1984, 2917, 2990, 2995
BseJI GATNNNNATC 5 cut(s) 243, 284, 462, 833, 1446
BseLI CCNNNNNNNGG 4 cut(s) 178, 223, 1289, 2595
BseMI GCAATG 6 cut(s) 411, 417, 681, 1314, 2916, 3216
BseNI ACTGG 9 cut(s) 1245, 1478, 1615, 2542, 2791, 2880, 2976, 3163, 3193
BseRI GAGGAG 1 cut(s) 1871
BseXI GCAGC 5 cut(s) 925, 1799, 2149, 2380, 3096
BseYI CCCAGC 1 cut(s) 1319
BsgI GTGCAG 1 cut(s) 1521
Bsh1236I CGCG 3 cut(s) 17, 77, 1456
BshFI GGCC 5 cut(s) 529, 1388, 1803, 1877, 3026
BsiHKAI GWGCWC 1 cut(s) 1039
BsiHKCI CYCGRG 3 cut(s) 110, 2626, 2729
BsiSI CCGG 3 cut(s) 66, 350, 1065
BslFI GGGAC 3 cut(s) 1023, 2362, 2775
BslI CCNNNNNNNGG 4 cut(s) 178, 223, 1289, 2595
BsmAI GTCTC 7 cut(s) 27, 113, 600, 2392, 2480, 2725, 2960
BsmBI CGTCTC 2 cut(s) 27, 113
BsmFI GGGAC 3 cut(s) 1023, 2362, 2775
BsmI GAATGC 2 cut(s) 703, 2009
BsnI GGCC 5 cut(s) 529, 1388, 1803, 1877, 3026
BsoBI CYCGRG 3 cut(s) 110, 2626, 2729
Bsp119I TTCGAA 1 cut(s) 330
Bsp1286I GDGCHC 1 cut(s) 1039
Bsp13I TCCGGA 1 cut(s) 349
Bsp1407I TGTACA 1 cut(s) 1651
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 2 cut(s) 2501, 3018
BspACI CCGC 5 cut(s) 52, 75, 202, 1111, 3244
BspANI GGCC 5 cut(s) 529, 1388, 1803, 1877, 3026
BspEI TCCGGA 1 cut(s) 349
BspFNI CGCG 3 cut(s) 17, 77, 1456
BspHI TCATGA 2 cut(s) 577, 1951
BspLI GGNNCC 2 cut(s) 117, 3181
BspMAI CTGCAG 2 cut(s) 943, 1522
BspOI GCTAGC 1 cut(s) 2306
BspPI GGATC 8 cut(s) 37, 110, 123, 149, 768, 1690, 2133, 2943
BspQI GCTCTTC 1 cut(s) 1413
BspT104I TTCGAA 1 cut(s) 330
BspTI CTTAAG 1 cut(s) 1148
BsrBI CCGCTC 1 cut(s) 3244
BsrDI GCAATG 6 cut(s) 411, 417, 681, 1314, 2916, 3216
BsrFI RCCGGY 1 cut(s) 1064
BsrGI TGTACA 1 cut(s) 1651
BsrI ACTGG 9 cut(s) 1245, 1478, 1615, 2542, 2791, 2880, 2976, 3163, 3193
BssAI RCCGGY 1 cut(s) 1064
BssECI CCNNGG 7 cut(s) 177, 256, 441, 892, 1466, 2501, 3018
BssNAI GTATAC 1 cut(s) 2509
BssNI GRCGYC 1 cut(s) 853
BssT1I CCWWGG 5 cut(s) 177, 441, 1466, 2501, 3018
Bst1107I GTATAC 1 cut(s) 2509
Bst2UI CCWGG 5 cut(s) 257, 858, 2826, 3184, 3198
Bst6I CTCTTC 3 cut(s) 1413, 2107, 2936
BstACI GRCGYC 1 cut(s) 853
BstAFI CTTAAG 1 cut(s) 1148
BstAUI TGTACA 1 cut(s) 1651
BstBI TTCGAA 1 cut(s) 330
BstC8I GCNNGC 6 cut(s) 59, 1083, 1115, 2300, 2304, 3246
BstDSI CCRYGG 3 cut(s) 892, 2501, 3018
BstEII GGTNACC 2 cut(s) 251, 2255
BstF5I GGATG 8 cut(s) 346, 437, 642, 1778, 1984, 2917, 2990, 2995
BstFNI CGCG 3 cut(s) 17, 77, 1456
BstH2I RGCGCY 3 cut(s) 169, 1550, 2959
BstHHI GCGC 6 cut(s) 168, 742, 1458, 1549, 2545, 2958
BstMAI GTCTC 7 cut(s) 27, 113, 600, 2392, 2480, 2725, 2960
BstMWI GCNNNNNNNGC 6 cut(s) 58, 83, 195, 1043, 2048, 2078
BstNI CCWGG 5 cut(s) 257, 858, 2826, 3184, 3198
BstNSI RCATGY 1 cut(s) 2144
BstPI GGTNACC 2 cut(s) 251, 2255
BstSCI CCNGG 5 cut(s) 255, 856, 2824, 3182, 3196
BstSFI CTRYAG 2 cut(s) 939, 1518
BstUI CGCG 3 cut(s) 17, 77, 1456
BstV1I GCAGC 5 cut(s) 925, 1799, 2149, 2380, 3096
BstV2I GAAGAC 1 cut(s) 3281
BstX2I RGATCY 6 cut(s) 115, 141, 586, 1682, 1828, 2902
BstXI CCANNNNNNTGG 2 cut(s) 312, 1473
BstYI RGATCY 6 cut(s) 115, 141, 586, 1682, 1828, 2902
BstZ17I GTATAC 1 cut(s) 2509
Bsu36I CCTNAGG 1 cut(s) 2646
BsuRI GGCC 5 cut(s) 529, 1388, 1803, 1877, 3026
BtgI CCRYGG 3 cut(s) 892, 2501, 3018
BtgZI GCGATG 1 cut(s) 84
BtrI CACGTC 1 cut(s) 2122
BtsCI GGATG 8 cut(s) 346, 437, 642, 1778, 1984, 2917, 2990, 2995
BtsI GCAGTG 2 cut(s) 193, 798
BtsIMutI CAGTG 9 cut(s) 102, 193, 798, 1212, 1252, 2847, 2969, 3087, 3108
Cac8I GCNNGC 6 cut(s) 59, 1083, 1115, 2300, 2304, 3246
CaiI CAGNNNCTG 3 cut(s) 1211, 1508, 3288
CciI TCATGA 2 cut(s) 577, 1951
CfoI GCGC 6 cut(s) 168, 742, 1458, 1549, 2545, 2958
Cfr10I RCCGGY 1 cut(s) 1064
Cfr13I GGNCC 5 cut(s) 315, 528, 1386, 2059, 2519
CseI GACGC 5 cut(s) 6, 23, 95, 842, 1462
Csp6I GTAC 4 cut(s) 79, 1652, 1911, 2144
CviQI GTAC 4 cut(s) 79, 1652, 1911, 2144
DraI TTTAAA 1 cut(s) 2452
DriI GACNNNNNGTC 2 cut(s) 19, 2680
EaeI YGGCCR 1 cut(s) 3024
Eam1104I CTCTTC 3 cut(s) 1413, 2107, 2936
Eam1105I GACNNNNNGTC 2 cut(s) 19, 2680
EarI CTCTTC 3 cut(s) 1413, 2107, 2936
EciI GGCGGA 1 cut(s) 1100
Eco130I CCWWGG 5 cut(s) 177, 441, 1466, 2501, 3018
Eco147I AGGCCT 1 cut(s) 1877
Eco32I GATATC 2 cut(s) 408, 460
Eco47I GGWCC 3 cut(s) 315, 2059, 2519
Eco47III AGCGCT 2 cut(s) 167, 2957
Eco57I CTGAAG 4 cut(s) 68, 728, 917, 3111
Eco81I CCTNAGG 1 cut(s) 2646
Eco88I CYCGRG 3 cut(s) 110, 2626, 2729
Eco91I GGTNACC 2 cut(s) 251, 2255
EcoO65I GGTNACC 2 cut(s) 251, 2255
EcoRI GAATTC 2 cut(s) 2234, 3192
EcoRII CCWGG 5 cut(s) 255, 856, 2824, 3182, 3196
EcoRV GATATC 2 cut(s) 408, 460
EcoT14I CCWWGG 5 cut(s) 177, 441, 1466, 2501, 3018
ErhI CCWWGG 5 cut(s) 177, 441, 1466, 2501, 3018
Esp3I CGTCTC 2 cut(s) 27, 113
FalI AAGNNNNNCTT 6 cut(s) 1142, 1174, 1211, 1243, 3102, 3134
FaqI GGGAC 3 cut(s) 1023, 2362, 2775
FauI CCCGC 1 cut(s) 3237
FauNDI CATATG 2 cut(s) 1054, 2115
FbaI TGATCA 1 cut(s) 1708
FblI GTMKAC 3 cut(s) 2508, 2579, 3155
Fnu4HI GCNGC 6 cut(s) 75, 939, 1788, 2163, 2394, 3085
FokI GGATG 8 cut(s) 333, 424, 629, 1765, 1971, 2924, 2997, 3002
Fsp4HI GCNGC 6 cut(s) 75, 939, 1788, 2163, 2394, 3085
GlaI GCGC 6 cut(s) 167, 741, 1457, 1548, 2544, 2957
GluI GCNGC 6 cut(s) 75, 939, 1788, 2163, 2394, 3085
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 5 cut(s) 122, 143, 1038, 2683, 2993
HaeII RGCGCY 3 cut(s) 169, 1550, 2959
HaeIII GGCC 5 cut(s) 529, 1388, 1803, 1877, 3026
HapII CCGG 3 cut(s) 66, 350, 1065
HgaI GACGC 5 cut(s) 6, 23, 95, 842, 1462
HhaI GCGC 6 cut(s) 168, 742, 1458, 1549, 2545, 2958
Hin1I GRCGYC 1 cut(s) 853
Hin6I GCGC 6 cut(s) 166, 740, 1456, 1547, 2543, 2956
HinP1I GCGC 6 cut(s) 166, 740, 1456, 1547, 2543, 2956
HincII GTYRAC 3 cut(s) 907, 1106, 1479
HindII GTYRAC 3 cut(s) 907, 1106, 1479
HindIII AAGCTT 4 cut(s) 911, 2131, 2176, 3116
HpaI GTTAAC 2 cut(s) 907, 1479
HpaII CCGG 3 cut(s) 66, 350, 1065
HphI GGTGA 5 cut(s) 1331, 1413, 2142, 2209, 3205
Hpy99I CGWCG 2 cut(s) 17, 22
HpyCH4IV ACGT 2 cut(s) 1334, 2121
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 83, 195, 1043, 2048, 2078
HpySE526I ACGT 2 cut(s) 1334, 2121
Hsp92I GRCGYC 1 cut(s) 853
HspAI GCGC 6 cut(s) 166, 740, 1456, 1547, 2543, 2956
Kpn2I TCCGGA 1 cut(s) 349
Ksp22I TGATCA 1 cut(s) 1708
KspAI GTTAAC 2 cut(s) 907, 1479
LguI GCTCTTC 1 cut(s) 1413
LmnI GCTCC 2 cut(s) 103, 3185
Lsp1109I GCAGC 5 cut(s) 925, 1799, 2149, 2380, 3096
LweI GCATC 7 cut(s) 61, 529, 651, 661, 2739, 2902, 3177
MaeII ACGT 2 cut(s) 1334, 2121
MaeIII GTNAC 8 cut(s) 251, 372, 1606, 1633, 1666, 2215, 2255, 3284
MbiI CCGCTC 1 cut(s) 3244
MfeI CAATTG 1 cut(s) 1434
MflI RGATCY 6 cut(s) 115, 141, 586, 1682, 1828, 2902
MhlI GDGCHC 1 cut(s) 1039
MlsI TGGCCA 1 cut(s) 3026
MluI ACGCGT 1 cut(s) 15
MluNI TGGCCA 1 cut(s) 3026
MmeI TCCRAC 3 cut(s) 177, 383, 1660
Mox20I TGGCCA 1 cut(s) 3026
MroI TCCGGA 1 cut(s) 349
MroXI GAANNNNTTC 2 cut(s) 167, 1157
MscI TGGCCA 1 cut(s) 3026
Msp20I TGGCCA 1 cut(s) 3026
MspA1I CMGCKG 2 cut(s) 1101, 1289
MspCI CTTAAG 1 cut(s) 1148
MspI CCGG 3 cut(s) 66, 350, 1065
MspR9I CCNGG 5 cut(s) 257, 858, 2826, 3184, 3198
MunI CAATTG 1 cut(s) 1434
Mva1269I GAATGC 2 cut(s) 703, 2009
MvaI CCWGG 5 cut(s) 257, 858, 2826, 3184, 3198
MvnI CGCG 3 cut(s) 17, 77, 1456
MwoI GCNNNNNNNGC 6 cut(s) 58, 83, 195, 1043, 2048, 2078
NcoI CCATGG 2 cut(s) 2501, 3018
NdeI CATATG 2 cut(s) 1054, 2115
NheI GCTAGC 1 cut(s) 2302
NlaIV GGNNCC 2 cut(s) 117, 3181
NmuCI GTSAC 2 cut(s) 372, 2215
NspI RCATGY 1 cut(s) 2144
NspV TTCGAA 1 cut(s) 330
PaeR7I CTCGAG 1 cut(s) 110
PagI TCATGA 2 cut(s) 577, 1951
PceI AGGCCT 1 cut(s) 1877
PciI ACATGT 1 cut(s) 2140
PciSI GCTCTTC 1 cut(s) 1413
PctI GAATGC 2 cut(s) 703, 2009
PdmI GAANNNNTTC 2 cut(s) 167, 1157
PfeI GAWTC 9 cut(s) 581, 652, 664, 1074, 1202, 1222, 1526, 2110, 2999
PflMI CCANNNNNTGG 1 cut(s) 1289
PfoI TCCNGGA 3 cut(s) 856, 2824, 3182
PkrI GCNGC 6 cut(s) 76, 940, 1789, 2164, 2395, 3086
PscI ACATGT 1 cut(s) 2140
PshBI ATTAAT 1 cut(s) 2085
PsiI TTATAA 1 cut(s) 1580
Psp6I CCWGG 5 cut(s) 255, 856, 2824, 3182, 3196
PspEI GGTNACC 2 cut(s) 251, 2255
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 5 cut(s) 255, 856, 2824, 3182, 3196
PspN4I GGNNCC 2 cut(s) 117, 3181
PspPI GGNCC 5 cut(s) 315, 528, 1386, 2059, 2519
PstI CTGCAG 2 cut(s) 943, 1522
PstNI CAGNNNCTG 3 cut(s) 1211, 1508, 3288
PsuI RGATCY 6 cut(s) 115, 141, 586, 1682, 1828, 2902
PvuII CAGCTG 2 cut(s) 1101, 1289
RsaI GTAC 4 cut(s) 80, 1653, 1912, 2145
RsaNI GTAC 4 cut(s) 79, 1652, 1911, 2144
SapI GCTCTTC 1 cut(s) 1413
SatI GCNGC 6 cut(s) 75, 939, 1788, 2163, 2394, 3085
Sau96I GGNCC 5 cut(s) 315, 528, 1386, 2059, 2519
ScrFI CCNGG 5 cut(s) 257, 858, 2826, 3184, 3198
SduI GDGCHC 1 cut(s) 1039
SfaNI GCATC 7 cut(s) 61, 529, 651, 661, 2739, 2902, 3177
SfcI CTRYAG 2 cut(s) 939, 1518
Sfr274I CTCGAG 1 cut(s) 110
SfuI TTCGAA 1 cut(s) 330
SgrAI CRCCGGYG 1 cut(s) 1064
SinI GGWCC 3 cut(s) 315, 2059, 2519
SlaI CTCGAG 1 cut(s) 110
SmlI CTYRAG 4 cut(s) 110, 132, 755, 1148
SmoI CTYRAG 4 cut(s) 110, 132, 755, 1148
SpeI ACTAGT 1 cut(s) 1637
SseBI AGGCCT 1 cut(s) 1877
SsiI CCGC 5 cut(s) 52, 75, 202, 1111, 3244
SspI AATATT 2 cut(s) 1867, 2416
StuI AGGCCT 1 cut(s) 1877
StyD4I CCNGG 5 cut(s) 255, 856, 2824, 3182, 3196
StyI CCWWGG 5 cut(s) 177, 441, 1466, 2501, 3018
TaiI ACGT 2 cut(s) 1337, 2124
TaqI TCGA 9 cut(s) 111, 237, 330, 456, 1039, 1072, 1552, 2439, 2947
TaqII GACCGA 1 cut(s) 2047
TatI WGTACW 2 cut(s) 1651, 1910
TauI GCSGC 1 cut(s) 77
TfiI GAWTC 9 cut(s) 581, 652, 664, 1074, 1202, 1222, 1526, 2110, 2999
TscAI CASTG 9 cut(s) 102, 200, 798, 1212, 1252, 2854, 2976, 3094, 3108
TseFI GTSAC 2 cut(s) 372, 2215
TseI GCWGC 5 cut(s) 938, 1787, 2162, 2393, 3084
Tsp45I GTSAC 2 cut(s) 372, 2215
TspRI CASTG 9 cut(s) 102, 200, 798, 1212, 1252, 2854, 2976, 3094, 3108
Van91I CCANNNNNTGG 1 cut(s) 1289
Vha464I CTTAAG 1 cut(s) 1148
VpaK11BI GGWCC 3 cut(s) 315, 2059, 2519
VspI ATTAAT 1 cut(s) 2085
XbaI TCTAGA 1 cut(s) 1831
XceI RCATGY 1 cut(s) 2144
XhoI CTCGAG 1 cut(s) 110
XmiI GTMKAC 3 cut(s) 2508, 2579, 3155
XmnI GAANNNNTTC 2 cut(s) 167, 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.