Rh7CG481100

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001890
Physical Location & Seq
Forward (+)
64573813 .. 64592073
18261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG481100.1

Sequence Viewer

Length: 591 bp
ATGGTGTCCCACTGTGGGCCAGCAGCTTGGGTCCAACTTCCTGGTTCAGGGTTTGGAGTCAAGGAGTGGTGGCTGGAGGCTTGGAACTTGGGGTCTACGTATCTGGATGGGCGTGGCTATCCACTAAAGGCCAAGACAAAAGTGTGTCCTATTTGCAGAGGTATTGGGAGAGTTACAATTCCTCCGTTCACATCAACATGCAGTACTTGTAAAGGGTCAGGCCAAATAATCAAGGAACATTGTATGTCATGTAGAGGATTAGGGATAGTTGAAGGTGCAAGAGAGGTTGAAGTTACCATCCCAGCAGGGGCAGAGCGGTTTCCTCTGATATATGAACTCGCATCTTGCAACCCATATCTTCCAGCAGATGAAGCTGATCAAGGGCCAGATGAGCCTATCAGTACCATGCCCATCCCCAATAGGAATAGAAAGAATCAGGTTGCTGAAGATCCTGTTTTTGCTAGAGATGGTGCAGATGTTTATGTGGACTCTAATATCAGCTTTACTCAAGCTATTCTTGGTGGTAAGGTTGAGGTGCCAACTTTAACCGGGAAGACAGAAGTAAAAGTAAGAGTTTTGTCTTCATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

196

Amino Acids

21.16

Weight (kDa)

6.14

Isoelectric Point (pI)

25.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ_CXXCXGXG PF00684 37 - 87 5.1e-07 DnaJ central domain
DnaJ_C PF01556 146 - 190 6.4e-11 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 535
AccBSI CCGCTC 1 cut(s) 316
AccI GTMKAC 1 cut(s) 95
AciI CCGC 1 cut(s) 316
AclWI GGATC 1 cut(s) 443
AcuI CTGAAG 1 cut(s) 465
AfaI GTAC 2 cut(s) 205, 403
AfiI CCNNNNNNNGG 3 cut(s) 15, 47, 307
AgsI TTSAA 2 cut(s) 272, 290
AjnI CCWGG 1 cut(s) 40
AluBI AGCT 4 cut(s) 26, 374, 501, 512
AluI AGCT 4 cut(s) 26, 374, 501, 512
AlwI GGATC 1 cut(s) 443
AoxI GGCC 4 cut(s) 17, 129, 220, 383
ApeKI GCWGC 1 cut(s) 23
AspS9I GGNCC 3 cut(s) 17, 31, 383
AsuC2I CCSGG 1 cut(s) 550
AvaII GGWCC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 535
BbsI GAAGAC 2 cut(s) 560, 573
BbvI GCAGC 1 cut(s) 35
BccI CCATC 4 cut(s) 101, 305, 419, 461
BciT130I CCWGG 1 cut(s) 42
BclI TGATCA 1 cut(s) 376
BcnI CCSGG 1 cut(s) 550
BfaI CTAG 1 cut(s) 462
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
BmcAI AGTACT 1 cut(s) 205
Bme1390I CCNGG 2 cut(s) 42, 550
Bme18I GGWCC 1 cut(s) 31
BmgT120I GGNCC 3 cut(s) 17, 31, 383
BmiI GGNNCC 2 cut(s) 32, 537
BmrFI CCNGG 2 cut(s) 42, 550
BmsI GCATC 1 cut(s) 350
BpiI GAAGAC 2 cut(s) 560, 573
BpmI CTGGAG 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 492
BpuMI CCSGG 1 cut(s) 550
BsaAI YACGTR 1 cut(s) 99
BsaXI ACNNNNNCTCC 2 cut(s) 166, 196
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 47, 307
BseBI CCWGG 1 cut(s) 42
BseGI GGATG 3 cut(s) 112, 297, 411
BseLI CCNNNNNNNGG 3 cut(s) 15, 47, 307
BseXI GCAGC 1 cut(s) 35
BseYI CCCAGC 1 cut(s) 301
BsgI GTGCAG 1 cut(s) 492
BshFI GGCC 4 cut(s) 19, 131, 222, 385
BshNI GGYRCC 1 cut(s) 535
BsiSI CCGG 1 cut(s) 549
BslI CCNNNNNNNGG 3 cut(s) 15, 47, 307
BsnI GGCC 4 cut(s) 19, 131, 222, 385
Bsp143I GATC 2 cut(s) 376, 448
BspACI CCGC 1 cut(s) 316
BspANI GGCC 4 cut(s) 19, 131, 222, 385
BspLI GGNNCC 2 cut(s) 32, 537
BspPI GGATC 1 cut(s) 443
BspT107I GGYRCC 1 cut(s) 535
BsrBI CCGCTC 1 cut(s) 316
BssMI GATC 2 cut(s) 376, 448
Bst2UI CCWGG 1 cut(s) 42
Bst4CI ACNGT 1 cut(s) 14
BstBAI YACGTR 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 21
BstENI CCTNNNNNAGG 1 cut(s) 45
BstF5I GGATG 3 cut(s) 112, 297, 411
BstKTI GATC 2 cut(s) 379, 451
BstMBI GATC 2 cut(s) 376, 448
BstMWI GCNNNNNNNGC 2 cut(s) 371, 391
BstNI CCWGG 1 cut(s) 42
BstNSI RCATGY 1 cut(s) 201
BstSCI CCNGG 2 cut(s) 40, 548
BstSNI TACGTA 1 cut(s) 99
BstV1I GCAGC 1 cut(s) 35
BstV2I GAAGAC 2 cut(s) 560, 573
BstX2I RGATCY 1 cut(s) 448
BstXI CCANNNNNNTGG 2 cut(s) 27, 41
BstYI RGATCY 1 cut(s) 448
BsuRI GGCC 4 cut(s) 19, 131, 222, 385
BtsCI GGATG 3 cut(s) 112, 297, 411
BtsIMutI CAGTG 1 cut(s) 10
Cac8I GCNNGC 1 cut(s) 21
Cfr13I GGNCC 3 cut(s) 17, 31, 383
Csp6I GTAC 2 cut(s) 204, 402
CviAII CATG 3 cut(s) 198, 249, 406
CviQI GTAC 2 cut(s) 204, 402
DpnI GATC 2 cut(s) 378, 450
DpnII GATC 2 cut(s) 376, 448
Eco105I TACGTA 1 cut(s) 99
Eco47I GGWCC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 465
EcoNI CCTNNNNNAGG 1 cut(s) 45
EcoRII CCWGG 1 cut(s) 40
FaeI CATG 3 cut(s) 201, 252, 409
FaiI YATR 8 cut(s) 199, 245, 250, 331, 333, 355, 407, 483
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FatI CATG 3 cut(s) 197, 248, 405
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 1 cut(s) 95
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 3 cut(s) 119, 284, 398
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 1 cut(s) 462
GluI GCNGC 1 cut(s) 24
GsaI CCCAGC 1 cut(s) 305
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 4 cut(s) 19, 131, 222, 385
HapII CCGG 1 cut(s) 549
Hin1II CATG 3 cut(s) 201, 252, 409
HinfI GANTC 3 cut(s) 57, 433, 488
HpaII CCGG 1 cut(s) 549
Hpy166II GTNNAC 3 cut(s) 96, 189, 487
Hpy188I TCNGA 1 cut(s) 327
Hpy188III TCNNGA 1 cut(s) 104
Hpy8I GTNNAC 3 cut(s) 96, 189, 487
HpyAV CCTTC 1 cut(s) 266
HpyCH4III ACNGT 1 cut(s) 14
HpyCH4IV ACGT 1 cut(s) 98
HpyCH4V TGCA 5 cut(s) 156, 201, 278, 348, 473
HpyF10VI GCNNNNNNNGC 2 cut(s) 371, 391
HpySE526I ACGT 1 cut(s) 98
Hsp92II CATG 3 cut(s) 201, 252, 409
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 2 cut(s) 376, 448
Lsp1109I GCAGC 1 cut(s) 35
LweI GCATC 1 cut(s) 350
MaeI CTAG 1 cut(s) 462
MaeII ACGT 1 cut(s) 98
MaeIII GTNAC 2 cut(s) 172, 292
MalI GATC 2 cut(s) 378, 450
MbiI CCGCTC 1 cut(s) 316
MboI GATC 2 cut(s) 376, 448
MboII GAAGA 4 cut(s) 350, 458, 565, 573
MflI RGATCY 1 cut(s) 448
MluCI AATT 1 cut(s) 177
MlyI GAGTC 2 cut(s) 66, 482
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 7 cut(s) 70, 152, 192, 248, 277, 333, 526
MseI TTAA 2 cut(s) 545, 589
MslI CAYNNNNRTG 1 cut(s) 196
MspI CCGG 1 cut(s) 549
MspR9I CCNGG 2 cut(s) 42, 550
MvaI CCWGG 1 cut(s) 42
MwoI GCNNNNNNNGC 2 cut(s) 371, 391
NciI CCSGG 1 cut(s) 550
NdeII GATC 2 cut(s) 376, 448
NlaIII CATG 3 cut(s) 201, 252, 409
NlaIV GGNNCC 2 cut(s) 32, 537
NspI RCATGY 1 cut(s) 201
PfeI GAWTC 1 cut(s) 433
PkrI GCNGC 1 cut(s) 25
PleI GAGTC 2 cut(s) 65, 482
PpsI GAGTC 2 cut(s) 65, 482
Ppu21I YACGTR 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 40
PspFI CCCAGC 1 cut(s) 301
PspGI CCWGG 1 cut(s) 40
PspN4I GGNNCC 2 cut(s) 32, 537
PspPI GGNCC 3 cut(s) 17, 31, 383
PsuI RGATCY 1 cut(s) 448
RsaI GTAC 2 cut(s) 205, 403
RsaNI GTAC 2 cut(s) 204, 402
RseI CAYNNNNRTG 1 cut(s) 196
SaqAI TTAA 2 cut(s) 545, 589
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 2 cut(s) 376, 448
Sau96I GGNCC 3 cut(s) 17, 31, 383
ScaI AGTACT 1 cut(s) 205
SchI GAGTC 2 cut(s) 66, 482
ScrFI CCNGG 2 cut(s) 42, 550
SfaNI GCATC 1 cut(s) 350
SinI GGWCC 1 cut(s) 31
SmiMI CAYNNNNRTG 1 cut(s) 196
SmlI CTYRAG 1 cut(s) 507
SmoI CTYRAG 1 cut(s) 507
SnaBI TACGTA 1 cut(s) 99
Sse9I AATT 1 cut(s) 177
SsiI CCGC 1 cut(s) 316
SspMI CTAG 1 cut(s) 462
StyD4I CCNGG 2 cut(s) 40, 548
TaaI ACNGT 1 cut(s) 14
TaiI ACGT 1 cut(s) 101
TasI AATT 1 cut(s) 177
TatI WGTACW 1 cut(s) 203
TfiI GAWTC 1 cut(s) 433
Tru1I TTAA 2 cut(s) 545, 589
Tru9I TTAA 2 cut(s) 545, 589
TscAI CASTG 1 cut(s) 17
TseI GCWGC 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 348, 384, 573
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 31
XagI CCTNNNNNAGG 1 cut(s) 45
XceI RCATGY 1 cut(s) 201
XmiI GTMKAC 1 cut(s) 95
XspI CTAG 1 cut(s) 462
ZrmI AGTACT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.