Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001948

Physical Location & Seq

Genomic Coordinates Forward (+)

32184187 .. 32187024

Gene Structure 2838 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G343000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 924 bp

ATGACCATCCCCATTGAGCAGCCTGACTTTGCGGTTGAGGTGGAAGAAAAGAAGGTCTCTGATCAGACGGGTGAGGAGAATGAACTGGTGTTGGATGGTGGATTTGTGGTGCCTCCAACAAACGCATTTGGCCACACTTTCAGGGATTATGATGTTAACAGTGACCGGAGAGATGGGGTTGAGGAATTCTATCGAATCAACCACATTAACCAAAGTGTTGACTTTGTGAAGCGGATGAGGGAAGAATATGGCAAACTGGATAAGGTGGAAATGAGCATATGGGAATGCTGTGAACTTCTCAATGAAGTTGTGGATGAGAGTGATCCTGACTTGGATGAGCCTCAGATTGAGCACCTCTTGCAGACTGCTGAAGCCATCAGAAAGGACTATCCTGATGAAGGCTGGCTGCATTTAACTGCCCTTATCCATGATCTTGGAAAGGTTCTTCATCTTCCTGCTTTTGGAGAGCTTCCTCAATGGGCTGTTGTGGGTGACACATGCCCTGTCGGGTGTGCCTTTGATGAGTCAATTGTTCATCACCAGCATTTCAAGGAAAATCCTGACTACAACAATCCTGCTTATAACACTAAGTATGGTATTTACTCCGAAGGTTGTGGACTCGACAATGTACTGATGTCATGGGGGCATGATGACTACATGTACTTGGTGGCCAAGGAAAACAAAAGCACTCTCCCTTCAGCTGGTCTTTTCATTATCAGATACCACTCATTTTATGCTTTACACAGGGCAGGAGCATATAAGCACTTGATGAATGAGGAGGACACTGAGAATTTGAAGTGGCTCAAAATATTCAACAAGTATGACCTTTACAGCAAGAGCAAAGTTTGCATTGATGTTGAGAAAGTGAAGCCCTACTATCTCTGTCTAATTGAGAAGTACTTTCCCGCAAAGCTGAGATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 map00053 map00562

Pfam Domains

Protein Families

MIOX

Protein Analysis

308

Amino Acids

35.67

Weight (kDa)

4.85

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14520 AT1G14520 AT1G14520 AT1G14520
fragaria_vesca	FvH4_4g36370 FvH4_4g36370 FvH4_6g32720 FvH4_6g32720 FvH4_6g32720 FvH4_6g32720
malus_domestica	MD16G1007900.v1.1 MD17G1179500.v1.1 MD17G1179700.v1.1
prunus_persica	Prupe.1G343000_v2.0.a1 Prupe.1G343000_v2.0.a1 Prupe.1G343000_v2.0.a1 Prupe.3G055000_v2.0.a1 Prupe.3G055000_v2.0.a1 Prupe.3G055000_v2.0.a1
pyrus_communis	pycom16g00770 pycom17g18890
rosa_chinensis	RchiOBHm_Chr2g0141741 RchiOBHm_Chr4g0446111
rosa_laevigata	RLG00000005691 RLG00000019932
rosa_multiflora	Rmu_co8191254.1_g000001 Rmu_sc0002928.1_g000009 Rmu_sc0030751.1_g000001 Rmu_sc0035578.1_g000001
rosa_roxburghii	Rroxscaffold_2G00103910 Rroxscaffold_5G00386510
rosa_rugosa	Rorug02G0368400 Rorug02G0368500
rosa_samantha	Rh2AG420100 Rh2BG429500 Rh2BG431000 Rh2CG407300 Rh2DG439400 Rh2DG440700 Rh4AG429500 Rh4BG439000 Rh4CG456300 Rh4DG437400
rosa_wichuraiana	Rw2G034450 Rw4G036700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	109
AciI	CCGC	3 cut(s)	32, 232, 906
AclWI	GGATC	1 cut(s)	317
AcoI	YGGCCR	2 cut(s)	130, 669
AcsI	RAATTY	2 cut(s)	185, 790
AcuI	CTGAAG	2 cut(s)	390, 681
AfaI	GTAC	3 cut(s)	630, 662, 899
AfiI	CCNNNNNNNGG	3 cut(s)	398, 461, 701
AflIII	ACRYGT	1 cut(s)	657
AgsI	TTSAA	3 cut(s)	550, 796, 814
AluBI	AGCT	3 cut(s)	469, 701, 913
AluI	AGCT	3 cut(s)	469, 701, 913
Alw21I	GWGCWC	1 cut(s)	354
Alw26I	GTCTC	1 cut(s)	61
AlwI	GGATC	1 cut(s)	317
AoxI	GGCC	2 cut(s)	130, 669
ApeKI	GCWGC	2 cut(s)	19, 406
ApoI	RAATTY	2 cut(s)	185, 790
AsuHPI	GGTGA	3 cut(s)	83, 503, 530
BalI	TGGCCA	2 cut(s)	132, 671
BanI	GGYRCC	1 cut(s)	109
Bbv12I	GWGCWC	1 cut(s)	354
BbvI	GCAGC	2 cut(s)	31, 393
BccI	CCATC	5 cut(s)	14, 89, 167, 383, 912
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	1 cut(s)	61
BisI	GCNGC	2 cut(s)	20, 407
BlsI	GCNGC	2 cut(s)	21, 408
BmcAI	AGTACT	1 cut(s)	899
BmiI	GGNNCC	1 cut(s)	111
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	1 cut(s)	672
BsaWI	WCCGGW	1 cut(s)	165
Bsc4I	CCNNNNNNNGG	3 cut(s)	398, 461, 701
Bse1I	ACTGG	2 cut(s)	90, 261
BseDI	CCNNGG	1 cut(s)	672
BseGI	GGATG	5 cut(s)	6, 100, 240, 319, 340
BseLI	CCNNNNNNNGG	3 cut(s)	398, 461, 701
BseMII	CTCAG	3 cut(s)	356, 777, 905
BseNI	ACTGG	2 cut(s)	90, 261
BseRI	GAGGAG	2 cut(s)	89, 791
BseXI	GCAGC	2 cut(s)	31, 393
BshFI	GGCC	2 cut(s)	132, 671
BshNI	GGYRCC	1 cut(s)	109
BsiHKAI	GWGCWC	1 cut(s)	354
BsiSI	CCGG	1 cut(s)	166
BslI	CCNNNNNNNGG	3 cut(s)	398, 461, 701
BsmAI	GTCTC	1 cut(s)	61
BsmI	GAATGC	1 cut(s)	290
BsnI	GGCC	2 cut(s)	132, 671
Bso31I	GGTCTC	1 cut(s)	61
Bsp1286I	GDGCHC	1 cut(s)	354
Bsp143I	GATC	3 cut(s)	61, 322, 430
BspACI	CCGC	3 cut(s)	32, 232, 906
BspANI	GGCC	2 cut(s)	132, 671
BspCNI	CTCAG	3 cut(s)	355, 778, 906
BspLI	GGNNCC	1 cut(s)	111
BspPI	GGATC	1 cut(s)	317
BspT107I	GGYRCC	1 cut(s)	109
BspTNI	GGTCTC	1 cut(s)	61
BsrI	ACTGG	2 cut(s)	90, 261
BssECI	CCNNGG	1 cut(s)	672
BssMI	GATC	3 cut(s)	61, 322, 430
BssT1I	CCWWGG	1 cut(s)	672
Bst4CI	ACNGT	1 cut(s)	161
BstAPI	GCANNNNNTGC	2 cut(s)	358, 846
BstC8I	GCNNGC	1 cut(s)	404
BstDEI	CTNAG	4 cut(s)	342, 588, 786, 914
BstENI	CCTNNNNNAGG	1 cut(s)	396
BstF5I	GGATG	5 cut(s)	6, 100, 240, 319, 340
BstKTI	GATC	3 cut(s)	64, 325, 433
BstMAI	GTCTC	1 cut(s)	61
BstMBI	GATC	3 cut(s)	61, 322, 430
BstMWI	GCNNNNNNNGC	2 cut(s)	358, 846
BstNSI	RCATGY	2 cut(s)	501, 661
BstV1I	GCAGC	2 cut(s)	31, 393
BstXI	CCANNNNNNTGG	1 cut(s)	434
BsuRI	GGCC	2 cut(s)	132, 671
BtsCI	GGATG	5 cut(s)	6, 100, 240, 319, 340
BtsIMutI	CAGTG	2 cut(s)	166, 783
Cac8I	GCNNGC	1 cut(s)	404
Csp6I	GTAC	3 cut(s)	629, 661, 898
CviAII	CATG	5 cut(s)	428, 498, 639, 647, 658
CviQI	GTAC	3 cut(s)	629, 661, 898
DdeI	CTNAG	4 cut(s)	342, 588, 786, 914
DpnI	GATC	3 cut(s)	63, 324, 432
DpnII	GATC	3 cut(s)	61, 322, 430
EaeI	YGGCCR	2 cut(s)	130, 669
Eco130I	CCWWGG	1 cut(s)	672
Eco31I	GGTCTC	1 cut(s)	61
Eco57I	CTGAAG	2 cut(s)	390, 681
EcoNI	CCTNNNNNAGG	1 cut(s)	396
EcoRI	GAATTC	1 cut(s)	185
EcoT14I	CCWWGG	1 cut(s)	672
ErhI	CCWWGG	1 cut(s)	672
FaeI	CATG	5 cut(s)	431, 501, 642, 650, 661
FatI	CATG	5 cut(s)	427, 497, 638, 646, 657
FauI	CCCGC	1 cut(s)	913
FauNDI	CATATG	1 cut(s)	278
FbaI	TGATCA	1 cut(s)	61
Fnu4HI	GCNGC	2 cut(s)	20, 407
FokI	GGATG	4 cut(s)	107, 247, 326, 347
Fsp4HI	GCNGC	2 cut(s)	20, 407
GluI	GCNGC	2 cut(s)	20, 407
HaeIII	GGCC	2 cut(s)	132, 671
HapII	CCGG	1 cut(s)	166
Hin1II	CATG	5 cut(s)	431, 501, 642, 650, 661
HincII	GTYRAC	2 cut(s)	157, 220
HindII	GTYRAC	2 cut(s)	157, 220
HinfI	GANTC	3 cut(s)	195, 524, 618
HpaI	GTTAAC	1 cut(s)	157
HpaII	CCGG	1 cut(s)	166
HphI	GGTGA	3 cut(s)	83, 503, 530
Hpy166II	GTNNAC	4 cut(s)	157, 220, 293, 617
Hpy188I	TCNGA	6 cut(s)	61, 66, 345, 380, 607, 719
Hpy188III	TCNNGA	3 cut(s)	326, 392, 560
Hpy8I	GTNNAC	4 cut(s)	157, 220, 293, 617
HpyAV	CCTTC	4 cut(s)	46, 392, 602, 705
HpyCH4III	ACNGT	1 cut(s)	161
HpyCH4V	TGCA	3 cut(s)	361, 409, 849
HpyF10VI	GCNNNNNNNGC	2 cut(s)	358, 846
HpyF3I	CTNAG	4 cut(s)	342, 588, 786, 914
Hsp92II	CATG	5 cut(s)	431, 501, 642, 650, 661
Ksp22I	TGATCA	1 cut(s)	61
KspAI	GTTAAC	1 cut(s)	157
Kzo9I	GATC	3 cut(s)	61, 322, 430
LmnI	GCTCC	1 cut(s)	752
Lsp1109I	GCAGC	2 cut(s)	31, 393
MaeIII	GTNAC	2 cut(s)	161, 491
MalI	GATC	3 cut(s)	63, 324, 432
MboI	GATC	3 cut(s)	61, 322, 430
MboII	GAAGA	4 cut(s)	56, 254, 437, 443
MfeI	CAATTG	1 cut(s)	528
MhlI	GDGCHC	1 cut(s)	354
MlsI	TGGCCA	2 cut(s)	132, 671
MluCI	AATT	4 cut(s)	185, 528, 790, 888
MluNI	TGGCCA	2 cut(s)	132, 671
MlyI	GAGTC	2 cut(s)	533, 612
MmeI	TCCRAC	2 cut(s)	72, 140
Mox20I	TGGCCA	2 cut(s)	132, 671
MscI	TGGCCA	2 cut(s)	132, 671
MseI	TTAA	3 cut(s)	156, 207, 413
Msp20I	TGGCCA	2 cut(s)	132, 671
MspA1I	CMGCKG	1 cut(s)	701
MspI	CCGG	1 cut(s)	166
MunI	CAATTG	1 cut(s)	528
Mva1269I	GAATGC	1 cut(s)	290
MwoI	GCNNNNNNNGC	2 cut(s)	358, 846
NdeI	CATATG	1 cut(s)	278
NdeII	GATC	3 cut(s)	61, 322, 430
NlaIII	CATG	5 cut(s)	431, 501, 642, 650, 661
NlaIV	GGNNCC	1 cut(s)	111
NmuCI	GTSAC	2 cut(s)	161, 491
NspI	RCATGY	2 cut(s)	501, 661
PciI	ACATGT	1 cut(s)	657
PctI	GAATGC	1 cut(s)	290
PfeI	GAWTC	1 cut(s)	195
PkrI	GCNGC	2 cut(s)	21, 408
PleI	GAGTC	2 cut(s)	532, 612
PpsI	GAGTC	2 cut(s)	532, 612
PscI	ACATGT	1 cut(s)	657
PsiI	TTATAA	1 cut(s)	582
PspN4I	GGNNCC	1 cut(s)	111
PvuII	CAGCTG	1 cut(s)	701
RsaI	GTAC	3 cut(s)	630, 662, 899
RsaNI	GTAC	3 cut(s)	629, 661, 898
SaqAI	TTAA	3 cut(s)	156, 207, 413
SatI	GCNGC	2 cut(s)	20, 407
Sau3AI	GATC	3 cut(s)	61, 322, 430
ScaI	AGTACT	1 cut(s)	899
SchI	GAGTC	2 cut(s)	533, 612
SduI	GDGCHC	1 cut(s)	354
Sse9I	AATT	4 cut(s)	185, 528, 790, 888
SsiI	CCGC	3 cut(s)	32, 232, 906
SspI	AATATT	1 cut(s)	810
StyI	CCWWGG	1 cut(s)	672
TaaI	ACNGT	1 cut(s)	161
TaqI	TCGA	2 cut(s)	193, 621
TasI	AATT	4 cut(s)	185, 528, 790, 888
TatI	WGTACW	3 cut(s)	628, 660, 897
TfiI	GAWTC	1 cut(s)	195
Tru1I	TTAA	3 cut(s)	156, 207, 413
Tru9I	TTAA	3 cut(s)	156, 207, 413
TscAI	CASTG	2 cut(s)	166, 790
TseFI	GTSAC	2 cut(s)	161, 491
TseI	GCWGC	2 cut(s)	19, 406
Tsp45I	GTSAC	2 cut(s)	161, 491
TspDTI	ATGAA	7 cut(s)	96, 318, 411, 437, 524, 700, 785
TspRI	CASTG	2 cut(s)	166, 790
XagI	CCTNNNNNAGG	1 cut(s)	396
XapI	RAATTY	2 cut(s)	185, 790
XceI	RCATGY	2 cut(s)	501, 661
ZrmI	AGTACT	1 cut(s)	899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.