Rmu_co8191254.1_g000001

Myo-inositol oxygenase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8191254.1
Physical Location & Seq
Reverse (-)
110 .. 574
465 bp
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UTR
Exon/CDS
Intron
Rmu_co8191254.1_g000001.1.cds

Sequence Viewer

Length: 210 bp
atggatcgcaattatgttgcagctttacacagggcaggggcatataagcacttgatgaatgaagatgacattgagaatttgaagtggctcaaagtgttcaacaagtatgacctttacagtaagagcaaagttcgcattgatgttgagaaagtcaagccctactatctctctctaattgagaagtactttcctgcaaagttgagatggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

69

Amino Acids

8.43

Weight (kDa)

9.49

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 1 cut(s) 76
AfaI GTAC 1 cut(s) 185
AgsI TTSAA 2 cut(s) 82, 100
AluBI AGCT 1 cut(s) 23
AluI AGCT 1 cut(s) 23
AlwI GGATC 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 20
ApoI RAATTY 1 cut(s) 76
BbvI GCAGC 1 cut(s) 32
BccI CCATC 1 cut(s) 198
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
BmcAI AGTACT 1 cut(s) 185
BseXI GCAGC 1 cut(s) 32
Bsp143I GATC 1 cut(s) 4
BspPI GGATC 1 cut(s) 12
BssMI GATC 1 cut(s) 4
Bst4CI ACNGT 1 cut(s) 119
BstKTI GATC 1 cut(s) 7
BstMBI GATC 1 cut(s) 4
BstMWI GCNNNNNNNGC 1 cut(s) 132
BstV1I GCAGC 1 cut(s) 32
Csp6I GTAC 1 cut(s) 184
CviJI RGCY 3 cut(s) 23, 88, 157
CviKI_1 RGCY 3 cut(s) 23, 88, 157
CviQI GTAC 1 cut(s) 184
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
FaiI YATR 4 cut(s) 15, 43, 45, 108
Fnu4HI GCNGC 1 cut(s) 21
Fsp4HI GCNGC 1 cut(s) 21
GluI GCNGC 1 cut(s) 21
HpyCH4III ACNGT 1 cut(s) 119
HpyCH4V TGCA 2 cut(s) 20, 194
HpyF10VI GCNNNNNNNGC 1 cut(s) 132
Kzo9I GATC 1 cut(s) 4
LpnPI CCDG 3 cut(s) 16, 21, 204
Lsp1109I GCAGC 1 cut(s) 32
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 1 cut(s) 74
MluCI AATT 3 cut(s) 10, 76, 174
MwoI GCNNNNNNNGC 1 cut(s) 132
NdeII GATC 1 cut(s) 4
PkrI GCNGC 1 cut(s) 22
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 185
SetI ASST 2 cut(s) 25, 114
SgeI CNNG 6 cut(s) 43, 48, 64, 115, 166, 203
Sse9I AATT 3 cut(s) 10, 76, 174
TaaI ACNGT 1 cut(s) 119
TasI AATT 3 cut(s) 10, 76, 174
TatI WGTACW 1 cut(s) 183
TseI GCWGC 1 cut(s) 20
TspDTI ATGAA 2 cut(s) 71, 75
XapI RAATTY 1 cut(s) 76
ZrmI AGTACT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.