Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003255

Physical Location & Seq

Genomic Coordinates Forward (+)

37644957 .. 37647856

Gene Structure 2900 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G444300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 351 bp

ATGGGGATTCCATCGGAAATGAGGGACATGTGGGTGAACCGCGGAAAAGGGTTGCTCATTCCTTCGCCAGCTGAAGAACAGAAGAGGTTAAGATCCGCAAAGTGTACCCAAGAGGGTGCAAAAGAGGGATTCAAGGCCGCTGTCATTGCTTGTGCTCTCACCACCGTGCCTACATTGGCTGCTGTTCGTATGATTCCTTGGGCAAAGCATAACCTCAATTATACTGCTCAAGCACTCATCATATGTGGTGCATCAATTGCTTCGTACTTCATCACTGCCGATAAAACTATCTTAGCATGCGCCAGAAAAAATGCCCAGTTGGAAGATTCCTTGAGACGCCAGAAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ENOD93

Protein Analysis

117

Amino Acids

12.72

Weight (kDa)

9.69

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25940
fragaria_vesca	FvH4_1g03760 FvH4_2g35210
malus_domestica	MD02G1036100.v1.1 MD02G1036200.v1.1 MD08G1110000.v1.1 MD15G1176300.v1.1 MD15G1176400.v1.1
prunus_persica	Prupe.1G444300_v2.0.a1 Prupe.7G239200_v2.0.a1
pyrus_communis	pycom02g02970 pycom02g02980 pycom08g09170
rosa_chinensis	RchiOBHm_Chr2g0089171 RchiOBHm_Chr6g0306721
rosa_laevigata	RLG00000010770 RLG00000016000
rosa_multiflora	Rmu_co8442367.1_g000001 Rmu_sc0008909.1_g000003 Rmu_sc0009729.1_g000002 Rmu_sc0017785.1_g000006 Rmu_sc0017786.1_g000006
rosa_roxburghii	Rroxscaffold_2G00152190 Rroxscaffold_7G00161510
rosa_rugosa	Rorug01G0487900 Rorug06G0351700 Rorug06G0351800
rosa_samantha	Rh2AG043700 Rh2BG042400 Rh2CG043700 Rh2DG042600 Rh6AG464300 Rh6BG436700 Rh6CG478400 Rh6DG465200
rosa_wichuraiana	Rw2G003390 Rw6G040450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	42
AciI	CCGC	4 cut(s)	40, 42, 96, 138
AclWI	GGATC	1 cut(s)	87
AcuI	CTGAAG	1 cut(s)	93
AcyI	GRCGYC	1 cut(s)	337
AfaI	GTAC	2 cut(s)	106, 266
AflIII	ACRYGT	1 cut(s)	27
AgsI	TTSAA	1 cut(s)	133
AleI	CACNNNNGTG	1 cut(s)	164
AluBI	AGCT	1 cut(s)	71
AluI	AGCT	1 cut(s)	71
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	1 cut(s)	328
AlwI	GGATC	1 cut(s)	87
AoxI	GGCC	1 cut(s)	135
ApeKI	GCWGC	1 cut(s)	179
AspLEI	GCGC	1 cut(s)	302
AsuHPI	GGTGA	2 cut(s)	46, 151
Bbv12I	GWGCWC	1 cut(s)	157
BbvI	GCAGC	1 cut(s)	166
BccI	CCATC	1 cut(s)	19
BcoDI	GTCTC	1 cut(s)	328
BisI	GCNGC	2 cut(s)	138, 180
BlsI	GCNGC	2 cut(s)	139, 181
BmrI	ACTGGG	1 cut(s)	310
BmsI	GCATC	1 cut(s)	260
BmuI	ACTGGG	1 cut(s)	310
BpuEI	CTTGAG	1 cut(s)	213
BsaHI	GRCGYC	1 cut(s)	337
BsaJI	CCNNGG	2 cut(s)	40, 197
Bse1I	ACTGG	1 cut(s)	316
Bse3DI	GCAATG	1 cut(s)	144
BseDI	CCNNGG	2 cut(s)	40, 197
BseMI	GCAATG	1 cut(s)	144
BseNI	ACTGG	1 cut(s)	316
BseXI	GCAGC	1 cut(s)	166
Bsh1236I	CGCG	1 cut(s)	42
BshFI	GGCC	1 cut(s)	137
BsiHKAI	GWGCWC	1 cut(s)	157
BslFI	GGGAC	1 cut(s)	38
BsmAI	GTCTC	1 cut(s)	328
BsmBI	CGTCTC	1 cut(s)	328
BsmFI	GGGAC	1 cut(s)	38
BsnI	GGCC	1 cut(s)	137
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp143I	GATC	1 cut(s)	92
BspACI	CCGC	4 cut(s)	40, 42, 96, 138
BspANI	GGCC	1 cut(s)	137
BspFNI	CGCG	1 cut(s)	42
BspPI	GGATC	1 cut(s)	87
BsrDI	GCAATG	1 cut(s)	144
BsrI	ACTGG	1 cut(s)	316
BssECI	CCNNGG	2 cut(s)	40, 197
BssMI	GATC	1 cut(s)	92
BssNI	GRCGYC	1 cut(s)	337
BssT1I	CCWWGG	1 cut(s)	197
Bst4CI	ACNGT	1 cut(s)	166
Bst6I	CTCTTC	1 cut(s)	77
BstACI	GRCGYC	1 cut(s)	337
BstAPI	GCANNNNNTGC	1 cut(s)	257
BstC8I	GCNNGC	2 cut(s)	69, 298
BstDEI	CTNAG	1 cut(s)	292
BstDSI	CCRYGG	1 cut(s)	40
BstFNI	CGCG	1 cut(s)	42
BstHHI	GCGC	1 cut(s)	302
BstKTI	GATC	1 cut(s)	95
BstMAI	GTCTC	1 cut(s)	328
BstMBI	GATC	1 cut(s)	92
BstMWI	GCNNNNNNNGC	2 cut(s)	146, 257
BstNSI	RCATGY	2 cut(s)	31, 300
BstUI	CGCG	1 cut(s)	42
BstV1I	GCAGC	1 cut(s)	166
BstX2I	RGATCY	1 cut(s)	92
BstYI	RGATCY	1 cut(s)	92
BsuRI	GGCC	1 cut(s)	137
BtgI	CCRYGG	1 cut(s)	40
BtsI	GCAGTG	1 cut(s)	273
BtsIMutI	CAGTG	1 cut(s)	273
Cac8I	GCNNGC	2 cut(s)	69, 298
CfoI	GCGC	1 cut(s)	302
Cfr42I	CCGCGG	1 cut(s)	43
CseI	GACGC	1 cut(s)	345
Csp6I	GTAC	2 cut(s)	105, 265
CviAII	CATG	2 cut(s)	28, 297
CviJI	RGCY	3 cut(s)	71, 137, 179
CviKI_1	RGCY	3 cut(s)	71, 137, 179
CviQI	GTAC	2 cut(s)	105, 265
DdeI	CTNAG	1 cut(s)	292
DpnI	GATC	1 cut(s)	94
DpnII	GATC	1 cut(s)	92
Eam1104I	CTCTTC	1 cut(s)	77
EarI	CTCTTC	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	197
Eco57I	CTGAAG	1 cut(s)	93
EcoT14I	CCWWGG	1 cut(s)	197
ErhI	CCWWGG	1 cut(s)	197
Esp3I	CGTCTC	1 cut(s)	328
FaeI	CATG	2 cut(s)	31, 300
FaiI	YATR	7 cut(s)	29, 191, 210, 222, 242, 244, 298
FaqI	GGGAC	1 cut(s)	38
FatI	CATG	2 cut(s)	27, 296
FauNDI	CATATG	1 cut(s)	242
Fnu4HI	GCNGC	2 cut(s)	138, 180
Fsp4HI	GCNGC	2 cut(s)	138, 180
GlaI	GCGC	1 cut(s)	301
GluI	GCNGC	2 cut(s)	138, 180
HaeIII	GGCC	1 cut(s)	137
HgaI	GACGC	1 cut(s)	345
HhaI	GCGC	1 cut(s)	302
Hin1I	GRCGYC	1 cut(s)	337
Hin1II	CATG	2 cut(s)	31, 300
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HinfI	GANTC	4 cut(s)	7, 129, 193, 326
HphI	GGTGA	2 cut(s)	46, 151
Hpy166II	GTNNAC	2 cut(s)	37, 105
Hpy188I	TCNGA	1 cut(s)	16
Hpy8I	GTNNAC	2 cut(s)	37, 105
HpyAV	CCTTC	1 cut(s)	72
HpyCH4III	ACNGT	1 cut(s)	166
HpyCH4V	TGCA	2 cut(s)	119, 251
HpyF10VI	GCNNNNNNNGC	2 cut(s)	146, 257
HpyF3I	CTNAG	1 cut(s)	292
Hsp92I	GRCGYC	1 cut(s)	337
Hsp92II	CATG	2 cut(s)	31, 300
HspAI	GCGC	1 cut(s)	300
KspI	CCGCGG	1 cut(s)	43
Kzo9I	GATC	1 cut(s)	92
LpnPI	CCDG	3 cut(s)	81, 316, 329
Lsp1109I	GCAGC	1 cut(s)	166
LweI	GCATC	1 cut(s)	260
MalI	GATC	1 cut(s)	94
MboI	GATC	1 cut(s)	92
MboII	GAAGA	3 cut(s)	86, 94, 335
MfeI	CAATTG	1 cut(s)	255
MflI	RGATCY	1 cut(s)	92
MhlI	GDGCHC	1 cut(s)	157
MluCI	AATT	2 cut(s)	217, 255
MmeI	TCCRAC	1 cut(s)	300
MnlI	CCTC	5 cut(s)	15, 78, 106, 118, 224
MseI	TTAA	1 cut(s)	89
MslI	CAYNNNNRTG	2 cut(s)	32, 164
MspA1I	CMGCKG	3 cut(s)	42, 71, 140
MunI	CAATTG	1 cut(s)	255
MvnI	CGCG	1 cut(s)	42
MwoI	GCNNNNNNNGC	2 cut(s)	146, 257
NdeI	CATATG	1 cut(s)	242
NdeII	GATC	1 cut(s)	92
NlaIII	CATG	2 cut(s)	31, 300
NspI	RCATGY	2 cut(s)	31, 300
OliI	CACNNNNGTG	1 cut(s)	164
PaeI	GCATGC	1 cut(s)	300
PciI	ACATGT	1 cut(s)	27
PfeI	GAWTC	4 cut(s)	7, 129, 193, 326
PkrI	GCNGC	2 cut(s)	139, 181
PscI	ACATGT	1 cut(s)	27
PsuI	RGATCY	1 cut(s)	92
PvuII	CAGCTG	1 cut(s)	71
RsaI	GTAC	2 cut(s)	106, 266
RsaNI	GTAC	2 cut(s)	105, 265
RseI	CAYNNNNRTG	2 cut(s)	32, 164
SacII	CCGCGG	1 cut(s)	43
SaqAI	TTAA	1 cut(s)	89
SatI	GCNGC	2 cut(s)	138, 180
Sau3AI	GATC	1 cut(s)	92
SduI	GDGCHC	1 cut(s)	157
SetI	ASST	3 cut(s)	73, 89, 216
SfaNI	GCATC	1 cut(s)	260
Sfr303I	CCGCGG	1 cut(s)	43
SgrBI	CCGCGG	1 cut(s)	43
SmiMI	CAYNNNNRTG	2 cut(s)	32, 164
SmlI	CTYRAG	2 cut(s)	228, 331
SmoI	CTYRAG	2 cut(s)	228, 331
SphI	GCATGC	1 cut(s)	300
Sse9I	AATT	2 cut(s)	217, 255
SsiI	CCGC	4 cut(s)	40, 42, 96, 138
StyI	CCWWGG	1 cut(s)	197
TaaI	ACNGT	1 cut(s)	166
TasI	AATT	2 cut(s)	217, 255
TauI	GCSGC	1 cut(s)	140
TfiI	GAWTC	4 cut(s)	7, 129, 193, 326
Tru1I	TTAA	1 cut(s)	89
Tru9I	TTAA	1 cut(s)	89
TscAI	CASTG	1 cut(s)	280
TseI	GCWGC	1 cut(s)	179
TspDTI	ATGAA	1 cut(s)	259
TspRI	CASTG	1 cut(s)	280
XceI	RCATGY	2 cut(s)	31, 300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.