Prupe.7G239200_v2.0.a1

Early nodulin-93-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0003255
Physical Location & Seq
Forward (+)
20642031 .. 20643226
1196 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G239200.1

Sequence Viewer

Length: 324 bp
ATGGCAAAAAATGTGGCTCCTCAGTCTCCCTTTGAGAAGAACAGCCTGACCTCAATTGATCAGCTGGCCTTGGCTAAGCGCTGCTCTCACGAGGGTGTGAAAGCAGGAGCTAAGGCAGCTGTGGTTGCCACCATTGCCACTGCCATTCCAACTATGGCTAGTGTGAGAATGCTACCTTGGGCAAGAGCCAATCTCAATCCCACTGCTCAGGCCCTCATAATCTCCACAGTGGCTGGAATGGCATATTTCATCGTGGCTGACAAGACTGTTTTGGCAACTGCAAGAAGGAACTCATTCAAACAAGCTGCTAACCGTGAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ENOD93

Protein Analysis

108

Amino Acids

11.27

Weight (kDa)

10.44

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 80
AgsI TTSAA 1 cut(s) 298
AjuI GAANNNNNNNTTGG 2 cut(s) 160, 192
AleI CACNNNNGTG 1 cut(s) 93
AluBI AGCT 4 cut(s) 64, 110, 119, 305
AluI AGCT 4 cut(s) 64, 110, 119, 305
Alw26I GTCTC 1 cut(s) 30
AlwNI CAGNNNCTG 1 cut(s) 233
Aor51HI AGCGCT 1 cut(s) 80
AoxI GGCC 2 cut(s) 66, 210
ApeKI GCWGC 3 cut(s) 81, 116, 305
Asp700I GAANNNNTTC 1 cut(s) 293
AspLEI GCGC 1 cut(s) 81
AspS9I GGNCC 1 cut(s) 211
BauI CACGAG 1 cut(s) 89
BbvI GCAGC 3 cut(s) 68, 128, 292
BclI TGATCA 1 cut(s) 58
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 1 cut(s) 159
BfoI RGCGCY 1 cut(s) 82
BisI GCNGC 3 cut(s) 82, 117, 306
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 3 cut(s) 83, 118, 307
BmgT120I GGNCC 1 cut(s) 211
BmiI GGNNCC 1 cut(s) 18
BplI GAGNNNNNCTC 2 cut(s) 177, 209
Bpu10I CCTNAGC 2 cut(s) 111, 207
Bpu1102I GCTNAGC 1 cut(s) 75
BsaJI CCNNGG 2 cut(s) 69, 176
Bse3DI GCAATG 1 cut(s) 132
BseDI CCNNGG 2 cut(s) 69, 176
BseMI GCAATG 1 cut(s) 132
BseMII CTCAG 2 cut(s) 35, 221
BseRI GAGGAG 1 cut(s) 9
BseXI GCAGC 3 cut(s) 68, 128, 292
BshFI GGCC 2 cut(s) 68, 212
BsmAI GTCTC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 174
BsnI GGCC 2 cut(s) 68, 212
Bsp143I GATC 1 cut(s) 58
Bsp1720I GCTNAGC 1 cut(s) 75
BspANI GGCC 2 cut(s) 68, 212
BspCNI CTCAG 2 cut(s) 34, 220
BspLI GGNNCC 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 132
BssECI CCNNGG 2 cut(s) 69, 176
BssMI GATC 1 cut(s) 58
BssSI CACGAG 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 69, 176
Bst2BI CACGAG 1 cut(s) 89
Bst4CI ACNGT 3 cut(s) 229, 268, 314
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 4 cut(s) 21, 75, 111, 207
BstH2I RGCGCY 1 cut(s) 82
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 1 cut(s) 61
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 1 cut(s) 58
BstMWI GCNNNNNNNGC 4 cut(s) 116, 125, 134, 239
BstV1I GCAGC 3 cut(s) 68, 128, 292
BsuRI GGCC 2 cut(s) 68, 212
BtsI GCAGTG 2 cut(s) 138, 201
BtsIMutI CAGTG 3 cut(s) 138, 201, 234
Cac8I GCNNGC 1 cut(s) 66
CaiI CAGNNNCTG 1 cut(s) 233
CfoI GCGC 1 cut(s) 81
Cfr13I GGNCC 1 cut(s) 211
CspCI CAANNNNNGTGG 1 cut(s) 29
CviAII CATG 1 cut(s) 321
DdeI CTNAG 4 cut(s) 21, 75, 111, 207
DpnI GATC 1 cut(s) 60
DpnII GATC 1 cut(s) 58
Eco130I CCWWGG 2 cut(s) 69, 176
Eco47III AGCGCT 1 cut(s) 80
EcoO109I RGGNCCY 1 cut(s) 211
EcoT14I CCWWGG 2 cut(s) 69, 176
ErhI CCWWGG 2 cut(s) 69, 176
FaeI CATG 1 cut(s) 324
FaiI YATR 4 cut(s) 155, 218, 244, 322
FatI CATG 1 cut(s) 320
FbaI TGATCA 1 cut(s) 58
Fnu4HI GCNGC 3 cut(s) 82, 117, 306
Fsp4HI GCNGC 3 cut(s) 82, 117, 306
FspBI CTAG 1 cut(s) 159
GlaI GCGC 1 cut(s) 80
GluI GCNGC 3 cut(s) 82, 117, 306
HaeII RGCGCY 1 cut(s) 82
HaeIII GGCC 2 cut(s) 68, 212
HhaI GCGC 1 cut(s) 81
Hin1II CATG 1 cut(s) 324
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
Hpy188III TCNNGA 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 279
HpyCH4III ACNGT 3 cut(s) 229, 268, 314
HpyCH4V TGCA 1 cut(s) 281
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 125, 134, 239
HpyF3I CTNAG 4 cut(s) 21, 75, 111, 207
Hsp92II CATG 1 cut(s) 324
HspAI GCGC 1 cut(s) 79
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 1 cut(s) 58
LmnI GCTCC 2 cut(s) 22, 107
LpnPI CCDG 5 cut(s) 50, 59, 90, 194, 219
Lsp1109I GCAGC 3 cut(s) 68, 128, 292
MaeI CTAG 1 cut(s) 159
MalI GATC 1 cut(s) 60
MboI GATC 1 cut(s) 58
MboII GAAGA 1 cut(s) 49
MfeI CAATTG 1 cut(s) 54
MluCI AATT 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 173
MnlI CCTC 4 cut(s) 30, 61, 85, 224
MroXI GAANNNNTTC 1 cut(s) 293
MslI CAYNNNNRTG 1 cut(s) 93
MspA1I CMGCKG 2 cut(s) 64, 119
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 1 cut(s) 174
MwoI GCNNNNNNNGC 4 cut(s) 116, 125, 134, 239
NdeII GATC 1 cut(s) 58
NlaIII CATG 1 cut(s) 324
NlaIV GGNNCC 1 cut(s) 18
OliI CACNNNNGTG 1 cut(s) 93
PctI GAATGC 1 cut(s) 174
PdmI GAANNNNTTC 1 cut(s) 293
PkrI GCNGC 3 cut(s) 83, 118, 307
PspN4I GGNNCC 1 cut(s) 18
PspPI GGNCC 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 233
PvuII CAGCTG 2 cut(s) 64, 119
RseI CAYNNNNRTG 1 cut(s) 93
SatI GCNGC 3 cut(s) 82, 117, 306
Sau3AI GATC 1 cut(s) 58
Sau96I GGNCC 1 cut(s) 211
SetI ASST 6 cut(s) 53, 66, 112, 121, 178, 307
SmiMI CAYNNNNRTG 1 cut(s) 93
Sse9I AATT 1 cut(s) 54
SspMI CTAG 1 cut(s) 159
StyI CCWWGG 2 cut(s) 69, 176
TaaI ACNGT 3 cut(s) 229, 268, 314
TasI AATT 1 cut(s) 54
TscAI CASTG 3 cut(s) 145, 208, 234
TseI GCWGC 3 cut(s) 81, 116, 305
TspDTI ATGAA 1 cut(s) 238
TspRI CASTG 3 cut(s) 145, 208, 234
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmnI GAANNNNTTC 1 cut(s) 293
XspI CTAG 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.