Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002494

Physical Location & Seq

Genomic Coordinates Forward (+)

26822009 .. 26822789

Gene Structure 781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G256200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 504 bp

ATGGTTGGAACTTCACCCTGTGCTTCCTGCAAGTTGCTGAGACGCAGATGCGCCAAGGATTGCATTTTTGCTCCTTACTTTCCATCTGATGACCCCCACAAGTTTGCCATTGTTCACAAGGTCTTTGGTGCTAGCAATGTTAGCAAAATGTTGCAGGAGCTTCCAGAACATCAGAGAGCAGATGCAGTGAGCAGCTTAGTGTATGAAGCCAATGCAAGAATGAGAGACCCAGTTTATGGGTGTGTTGGGGCCATATCTTACCTGCAAAACCAGGTCTCTGAGCTACAAATGCAACTTGCTGTGGCTCAAGCAGAGATTCTCTGCATTCAGATGCAGCATGAGCCTACGGTTCCTACCCCACAGCAGATATTAGACACAGATGAGAAATCATATTTTCTCCCCAACAATTTCCCTCAGTATCTAAATTTTACCTCCTCTTCCAGCAATGTAATCCATGACTCTCTCAAGAGGGAGAGCATTTTTGGACAAGACATGGTTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LOB

Protein Analysis

168

Amino Acids

18.72

Weight (kDa)

5.91

Isoelectric Point (pI)

50.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30130
fragaria_vesca	FvH4_3g39540 FvH4_7g25110
malus_domestica	MD01G1157900.v1.1 MD03G1060100.v1.1 MD07G1226600.v1.1 MD11G1063200.v1.1
prunus_persica	Prupe.2G256200_v2.0.a1 Prupe.6G050400_v2.0.a1
pyrus_communis	pycom07g20510 pycom11g05290
rosa_chinensis	RchiOBHm_Chr1g0370961 RchiOBHm_Chr1g0370991 RchiOBHm_Chr5g0071311
rosa_laevigata	RLG00000026992 RLG00000026995 RLG00000036201
rosa_multiflora	Rmu_co8489701.1_g000001 Rmu_sc0001018.1_g000013 Rmu_sc0001018.1_g000019 Rmu_sc0006990.1_g000009
rosa_roxburghii	Rroxscaffold_1G00009830 Rroxscaffold_4G00286050 Rroxscaffold_4G00286080
rosa_rugosa	Rorug01G0360300 Rorug01G0360600 Rorug05G0411200
rosa_samantha	Rh1AG370700 Rh1BG334300 Rh1BG334500 Rh1CG347600 Rh1CG347800 Rh1DG365500 Rh1DG365700 Rh5AG467600 Rh5BG486100 Rh5CG510500 Rh5DG497300
rosa_wichuraiana	Rw1G032620 Rw1G032640 Rw5G043440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	270
AccB7I	CCANNNNNTGG	1 cut(s)	236
AcsI	RAATTY	1 cut(s)	424
AdeI	CACNNNGTG	1 cut(s)	20
AfiI	CCNNNNNNNGG	1 cut(s)	236
AjnI	CCWGG	1 cut(s)	270
AluBI	AGCT	3 cut(s)	160, 195, 283
AluI	AGCT	3 cut(s)	160, 195, 283
Alw26I	GTCTC	3 cut(s)	34, 219, 280
AoxI	GGCC	1 cut(s)	249
ApeKI	GCWGC	2 cut(s)	192, 334
ApoI	RAATTY	1 cut(s)	424
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	1 cut(s)	249
AsuHPI	GGTGA	1 cut(s)	6
AsuNHI	GCTAGC	1 cut(s)	131
BbvI	GCAGC	2 cut(s)	204, 346
BccI	CCATC	1 cut(s)	91
BciT130I	CCWGG	1 cut(s)	272
BcoDI	GTCTC	3 cut(s)	34, 219, 280
BfaI	CTAG	1 cut(s)	132
BfuAI	ACCTGC	1 cut(s)	270
BisI	GCNGC	2 cut(s)	193, 335
BlsI	GCNGC	2 cut(s)	194, 336
Bme1390I	CCNGG	1 cut(s)	272
BmgT120I	GGNCC	1 cut(s)	249
BmiI	GGNNCC	2 cut(s)	250, 351
BmrFI	CCNGG	1 cut(s)	272
BmrI	ACTGGG	1 cut(s)	224
BmsI	GCATC	3 cut(s)	38, 172, 321
BmtI	GCTAGC	1 cut(s)	135
BmuI	ACTGGG	1 cut(s)	224
BpuEI	CTTGAG	2 cut(s)	291, 449
BsaI	GGTCTC	2 cut(s)	219, 280
BsaJI	CCNNGG	1 cut(s)	54
Bsc4I	CCNNNNNNNGG	1 cut(s)	236
Bse1I	ACTGG	1 cut(s)	230
Bse3DI	GCAATG	2 cut(s)	142, 451
BseBI	CCWGG	1 cut(s)	272
BseDI	CCNNGG	1 cut(s)	54
BseLI	CCNNNNNNNGG	1 cut(s)	236
BseMI	GCAATG	2 cut(s)	142, 451
BseMII	CTCAG	3 cut(s)	29, 270, 428
BseNI	ACTGG	1 cut(s)	230
BseRI	GAGGAG	1 cut(s)	424
BseXI	GCAGC	2 cut(s)	204, 346
BshFI	GGCC	1 cut(s)	251
BslI	CCNNNNNNNGG	1 cut(s)	236
BsmAI	GTCTC	3 cut(s)	34, 219, 280
BsmBI	CGTCTC	1 cut(s)	34
BsmI	GAATGC	1 cut(s)	324
BsnI	GGCC	1 cut(s)	251
Bso31I	GGTCTC	2 cut(s)	219, 280
BspANI	GGCC	1 cut(s)	251
BspCNI	CTCAG	3 cut(s)	30, 271, 427
BspLI	GGNNCC	2 cut(s)	250, 351
BspMI	ACCTGC	1 cut(s)	270
BspOI	GCTAGC	1 cut(s)	135
BspTNI	GGTCTC	2 cut(s)	219, 280
BsrDI	GCAATG	2 cut(s)	142, 451
BsrI	ACTGG	1 cut(s)	230
BssECI	CCNNGG	1 cut(s)	54
BssT1I	CCWWGG	1 cut(s)	54
Bst2UI	CCWGG	1 cut(s)	272
Bst4CI	ACNGT	1 cut(s)	349
Bst6I	CTCTTC	1 cut(s)	442
BstC8I	GCNNGC	1 cut(s)	133
BstDEI	CTNAG	4 cut(s)	38, 196, 279, 414
BstHHI	GCGC	1 cut(s)	53
BstMAI	GTCTC	3 cut(s)	34, 219, 280
BstMWI	GCNNNNNNNGC	3 cut(s)	141, 289, 340
BstNI	CCWGG	1 cut(s)	272
BstSCI	CCNGG	1 cut(s)	270
BstV1I	GCAGC	2 cut(s)	204, 346
BsuRI	GGCC	1 cut(s)	251
BtsI	GCAGTG	1 cut(s)	192
BtsIMutI	CAGTG	1 cut(s)	192
BveI	ACCTGC	1 cut(s)	270
Cac8I	GCNNGC	1 cut(s)	133
CfoI	GCGC	1 cut(s)	53
Cfr13I	GGNCC	1 cut(s)	249
CseI	GACGC	1 cut(s)	51
CsiI	ACCWGGT	1 cut(s)	270
CviAII	CATG	3 cut(s)	338, 455, 493
CviJI	RGCY	7 cut(s)	160, 195, 209, 251, 283, 305, 343
CviKI_1	RGCY	7 cut(s)	160, 195, 209, 251, 283, 305, 343
DdeI	CTNAG	4 cut(s)	38, 196, 279, 414
DraIII	CACNNNGTG	1 cut(s)	20
Eam1104I	CTCTTC	1 cut(s)	442
EarI	CTCTTC	1 cut(s)	442
Eco130I	CCWWGG	1 cut(s)	54
Eco31I	GGTCTC	2 cut(s)	219, 280
EcoRII	CCWGG	1 cut(s)	270
EcoT14I	CCWWGG	1 cut(s)	54
ErhI	CCWWGG	1 cut(s)	54
Esp3I	CGTCTC	1 cut(s)	34
FaeI	CATG	3 cut(s)	341, 458, 496
FaiI	YATR	7 cut(s)	204, 237, 254, 339, 391, 456, 494
FatI	CATG	3 cut(s)	337, 454, 492
Fnu4HI	GCNGC	2 cut(s)	193, 335
Fsp4HI	GCNGC	2 cut(s)	193, 335
FspBI	CTAG	1 cut(s)	132
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	2 cut(s)	193, 335
HaeIII	GGCC	1 cut(s)	251
HgaI	GACGC	1 cut(s)	51
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	3 cut(s)	341, 458, 496
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HinfI	GANTC	2 cut(s)	316, 458
HphI	GGTGA	1 cut(s)	6
Hpy166II	GTNNAC	1 cut(s)	115
Hpy188I	TCNGA	4 cut(s)	88, 174, 280, 330
Hpy188III	TCNNGA	2 cut(s)	164, 466
Hpy8I	GTNNAC	1 cut(s)	115
HpyCH4III	ACNGT	1 cut(s)	349
HpyCH4V	TGCA	9 cut(s)	30, 63, 154, 185, 215, 265, 292, 324, 334
HpyF10VI	GCNNNNNNNGC	3 cut(s)	141, 289, 340
HpyF3I	CTNAG	4 cut(s)	38, 196, 279, 414
Hsp92II	CATG	3 cut(s)	341, 458, 496
HspAI	GCGC	1 cut(s)	51
LmnI	GCTCC	2 cut(s)	76, 157
LpnPI	CCDG	9 cut(s)	31, 40, 140, 177, 243, 257, 275, 284, 454
Lsp1109I	GCAGC	2 cut(s)	204, 346
LweI	GCATC	3 cut(s)	38, 172, 321
MabI	ACCWGGT	1 cut(s)	270
MaeI	CTAG	1 cut(s)	132
MboII	GAAGA	1 cut(s)	429
MluCI	AATT	2 cut(s)	406, 424
MlyI	GAGTC	1 cut(s)	452
MnlI	CCTC	4 cut(s)	423, 442, 445, 462
MseI	TTAA	1 cut(s)	502
MslI	CAYNNNNRTG	1 cut(s)	329
MspR9I	CCNGG	1 cut(s)	272
Mva1269I	GAATGC	1 cut(s)	324
MvaI	CCWGG	1 cut(s)	272
MwoI	GCNNNNNNNGC	3 cut(s)	141, 289, 340
NheI	GCTAGC	1 cut(s)	131
NlaIII	CATG	3 cut(s)	341, 458, 496
NlaIV	GGNNCC	2 cut(s)	250, 351
PctI	GAATGC	1 cut(s)	324
PfeI	GAWTC	1 cut(s)	316
PflMI	CCANNNNNTGG	1 cut(s)	236
PkrI	GCNGC	2 cut(s)	194, 336
PleI	GAGTC	1 cut(s)	452
PpsI	GAGTC	1 cut(s)	452
Psp6I	CCWGG	1 cut(s)	270
PspGI	CCWGG	1 cut(s)	270
PspN4I	GGNNCC	2 cut(s)	250, 351
PspPI	GGNCC	1 cut(s)	249
RseI	CAYNNNNRTG	1 cut(s)	329
SaqAI	TTAA	1 cut(s)	502
SatI	GCNGC	2 cut(s)	193, 335
Sau96I	GGNCC	1 cut(s)	249
SchI	GAGTC	1 cut(s)	452
ScrFI	CCNGG	1 cut(s)	272
SetI	ASST	7 cut(s)	123, 162, 197, 264, 276, 285, 434
SexAI	ACCWGGT	1 cut(s)	270
SfaNI	GCATC	3 cut(s)	38, 172, 321
SmiMI	CAYNNNNRTG	1 cut(s)	329
SmlI	CTYRAG	2 cut(s)	306, 464
SmoI	CTYRAG	2 cut(s)	306, 464
Sse9I	AATT	2 cut(s)	406, 424
SspMI	CTAG	1 cut(s)	132
StyD4I	CCNGG	1 cut(s)	270
StyI	CCWWGG	1 cut(s)	54
TaaI	ACNGT	1 cut(s)	349
TasI	AATT	2 cut(s)	406, 424
TfiI	GAWTC	1 cut(s)	316
Tru1I	TTAA	1 cut(s)	502
Tru9I	TTAA	1 cut(s)	502
TscAI	CASTG	1 cut(s)	192
TseI	GCWGC	2 cut(s)	192, 334
TspDTI	ATGAA	1 cut(s)	219
TspRI	CASTG	1 cut(s)	192
Van91I	CCANNNNNTGG	1 cut(s)	236
XapI	RAATTY	1 cut(s)	424
XspI	CTAG	1 cut(s)	132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.