Rorug05G0411200

LOB domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000946
Physical Location & Seq
Reverse (-)
56785484 .. 56792422
6939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0411200.1

Sequence Viewer

Length: 2112 bp
ATGAGTGAGTCGGCCAAGGTTTTGTACATAGTGGTGGTGGATGGCGAGGAAGCGAGAGAGAAAGGGAAGGAGTCTTTTCGATATACGCGTCCGGTTTTGCAGAGCTCTCTGCAACTCATGGGATGCAAACCTCGACACGCCTTCAAGATTAGTCAACGAGTTTTTGAATTGATAAGAAACGTAAGTTCATGTAATGCCTTGCTTCCGGACGGGACAGAGAATGTTTCCCCCAGTAAAGCTGAGGCTTGCAAGCATATGGTTTCAGGGGAAGATCATAGAAGTAAGAGTGTACCATTTGAAATGTACAAAACACGTACAACTGTTGTAGTTAGGAGAGAAACTTTCTTGGATGTTGTTTGTGATGCTCTGGCTGAGTACAAGTATGTTGGTCCAAATCAGAGGGCAGACTTAGTTTTGGCATGCAGAATTCGAGAACGGAAGGAATCTGTAACAGTACTGTTGTGCGGCACCAGTGGCTGTGGAAAATCTACTTTGTCTTCATTGCTGGGTAGTAGGTTGGGAATCACAACTGTGATATCTACTGACTCGATTCGGCACATGATGAGGAGTTTCGCAGATGAGAAGCAAAATCCTTTACTATGGGCTTCAACCTATCATGCAGGGGAGTGTTTAGATCCAGTGGCAGTTGCAGAAGCAAAAGCCAAAAAGAAAGCCAAAAAATCAGCTGGAAGTTCACATTCACTTTCTAAAGATGGAATAGTTGATGGCTCTATGTCAGACGCTGGTTCGAGTACTGCTGAATTGATCGGTCCAAAGCAGATGGCCATTGAAGGATTCAAGGCACAAAGTGAGATGGTAATTGACAGTCTTGACCGTCTTATTACTGCATGGGAGGAAAGAAAAGAATCAGTTATTGTAGAAGGTGTTCACTTAAGCCTTAATTTTGTGATGGGGCTTATGAAGAAACACCCTTCGATCATACCATTCATGATATTTATCACAAATGAGGATAAGCACTTGGAGAGATTTGCAGTACGTGCAAAGTATATGACACTGGACCCAGCAAAGAACAAATATGTGAAGTACATCCGAAACATCAGAACAATTCAAGAATATCTCTGCCAGAGGGCTGACAAGCATCTTGTCCCCAAAATTAACAACACTAATGTTGACAAGAGTGTGGCTGCAATCCATGCAACAGTCTTTAGCTGCCTCCGTAGGCGTGAAGCAGGGGAACAACTTTATGATCCCACGAGAAATACAGTAACCGTAGTGGATGAGGAGTATAGGAACCAGCGTGCAGCCAATTCTTTGAGTTCAAAGGGGATGTTTCAACTTATCCAGAGAAAAGGGTCATCTAGGCATCTGATGGCTCTTGTAAATACTGATGGATCTGTAGCAAAGGCTTGGCCTGTTGATTCAGTCGATCGTAATGGGAAGCCTATATTCTGCCATGGGACTGAGATGGAGATTGGCACTGCAGAGCAAGTGAATCTTCAGTTTGGTCTCTATGGTTTAAGCGCTTGGCCCAAAGATGGTGGCCCAAGCTGTGCTGGAAGTGTTGATGGGTCAAGGGCTGATGATACTGAGACTGTAAGTAGGCATTTCTCTTCTTGCTGCAGCTCACCACGATCTGAGGGACCTGCCAAGGAGCGGAAGGAGGACAACTCGGTGCATGGCAGCGATGAAGAGGTTGATGAATTAGCTGATGTAGGCAGTGATGAGGAATTAAGTGATGATGATGACAAGCAGGTTGAAGAAGAGGTAGGGTCAGTGGATGAGGAGTCTACGAAATCAGATGAAGAGTATGAAGACCTGGCAATGCAGGACGTTCAGGGGAATGGATACTGGTCAGATGATGATGCTACGGAGCGCAAGCTTAAGATATTCCCTGTTGCTGAGCACCCATCAGCCAATAAGGATGTGGATAAGTATCGCCAGAACCTGGATCTTTTCCTTAGAACTAGAAACGAGTCATTTTCTGAACCACTATGTTCATATACTTCTCTCTTTATGGAGAAGAATGAGATGACAATGCCGTGCTCTGGCAATATGAAAATTAGAAAACGCCGGTCCCTTAGCATTCCAGCATTGGGAAGGCATGGGTCAAAAACAAGGGGTCCCATACTTTCTGGTGCCCCTCAGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LOB

Protein Analysis

703

Amino Acids

78.08

Weight (kDa)

6.24

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_33 PF13671 152 - 198 7.2e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1612, 1702
AccB1I GGYRCC 2 cut(s) 467, 2096
AccB7I CCANNNNNTGG 1 cut(s) 1906
AccBSI CCGCTC 1 cut(s) 1615
AccI GTMKAC 1 cut(s) 1748
AccII CGCG 1 cut(s) 88
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 2 cut(s) 465, 1615
AclWI GGATC 4 cut(s) 629, 1202, 1360, 1917
AcoI YGGCCR 2 cut(s) 12, 783
AcsI RAATTY 1 cut(s) 426
AcuI CTGAAG 1 cut(s) 1442
AdeI CACNNNGTG 1 cut(s) 809
AfaI GTAC 9 cut(s) 26, 291, 305, 316, 377, 456, 754, 996, 1046
AfeI AGCGCT 1 cut(s) 1483
AfiI CCNNNNNNNGG 5 cut(s) 1496, 1614, 1906, 2006, 2054
AflII CTTAAG 2 cut(s) 892, 1841
AflIII ACRYGT 2 cut(s) 86, 311
AjnI CCWGG 2 cut(s) 1776, 1905
AleI CACNNNNGTG 1 cut(s) 530
AluBI AGCT 8 cut(s) 105, 239, 686, 1170, 1509, 1584, 1667, 1840
AluI AGCT 8 cut(s) 105, 239, 686, 1170, 1509, 1584, 1667, 1840
Alw21I GWGCWC 3 cut(s) 107, 1866, 2006
Alw26I GTCTC 2 cut(s) 1472, 1544
AlwI GGATC 4 cut(s) 629, 1202, 1360, 1917
AlwNI CAGNNNCTG 3 cut(s) 477, 743, 1906
Aor13HI TCCGGA 1 cut(s) 205
Aor51HI AGCGCT 1 cut(s) 1483
AoxI GGCC 5 cut(s) 12, 783, 1370, 1487, 1501
ApeKI GCWGC 6 cut(s) 1145, 1170, 1262, 1578, 1581, 1641
ApoI RAATTY 1 cut(s) 426
Asp700I GAANNNNTTC 1 cut(s) 885
AspLEI GCGC 2 cut(s) 1484, 1836
AspS9I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
AsuHPI GGTGA 1 cut(s) 1578
AvaII GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
BaeGI GKGCMC 1 cut(s) 2101
BalI TGGCCA 1 cut(s) 785
BanI GGYRCC 2 cut(s) 467, 2096
BanII GRGCYC 1 cut(s) 107
BauI CACGAG 1 cut(s) 1213
BbsI GAAGAC 2 cut(s) 489, 1779
Bbv12I GWGCWC 3 cut(s) 107, 1866, 2006
BbvCI CCTCAGC 1 cut(s) 240
BbvI GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BceAI ACGGC 1 cut(s) 1984
BciT130I CCWGG 2 cut(s) 1778, 1907
BciVI GTATCC 1 cut(s) 1799
BcoDI GTCTC 2 cut(s) 1472, 1544
BfaI CTAG 2 cut(s) 1320, 1926
BfmI CTRYAG 3 cut(s) 1356, 1440, 1579
BfoI RGCGCY 1 cut(s) 1485
BfrI CTTAAG 2 cut(s) 892, 1841
BfuAI ACCTGC 2 cut(s) 1612, 1702
BfuI GTATCC 1 cut(s) 1799
BisI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
BlpI GCTNAGC 1 cut(s) 1860
BlsI GCNGC 7 cut(s) 467, 1147, 1172, 1264, 1580, 1583, 1643
BmcAI AGTACT 2 cut(s) 456, 754
Bme1390I CCNGG 2 cut(s) 1778, 1907
Bme18I GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
BmgT120I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
BmiI GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
BmrFI CCNGG 2 cut(s) 1778, 1907
BmrI ACTGGG 1 cut(s) 225
BmsI GCATC 5 cut(s) 113, 352, 1108, 1333, 1813
BmuI ACTGGG 1 cut(s) 225
BpiI GAAGAC 2 cut(s) 489, 1779
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
Bpu10I CCTNAGC 2 cut(s) 240, 2039
Bpu1102I GCTNAGC 1 cut(s) 1860
BsaAI YACGTR 2 cut(s) 314, 998
BsaBI GATNNNNATC 2 cut(s) 956, 1893
BsaI GGTCTC 1 cut(s) 1472
BsaJI CCNNGG 3 cut(s) 15, 1414, 1608
BsaWI WCCGGW 2 cut(s) 91, 205
Bsc4I CCNNNNNNNGG 5 cut(s) 1496, 1614, 1906, 2006, 2054
Bse118I RCCGGY 1 cut(s) 2031
Bse1I ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
Bse3DI GCAATG 2 cut(s) 500, 1788
Bse8I GATNNNNATC 2 cut(s) 956, 1893
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 2 cut(s) 1778, 1907
BseDI CCNNGG 3 cut(s) 15, 1414, 1608
BseGI GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BseJI GATNNNNATC 2 cut(s) 956, 1893
BseLI CCNNNNNNNGG 5 cut(s) 1496, 1614, 1906, 2006, 2054
BseMI GCAATG 2 cut(s) 500, 1788
BseMII CTCAG 6 cut(s) 231, 363, 1413, 1539, 1587, 1851
BseNI ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
BseRI GAGGAG 3 cut(s) 580, 1256, 1757
BseSI GKGCMC 1 cut(s) 2101
BseXI GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BseYI CCCAGC 2 cut(s) 505, 1021
BsgI GTGCAG 1 cut(s) 1281
Bsh1236I CGCG 1 cut(s) 88
Bsh1285I CGRYCG 1 cut(s) 1390
BshFI GGCC 5 cut(s) 14, 785, 1372, 1489, 1503
BshNI GGYRCC 2 cut(s) 467, 2096
BsiEI CGRYCG 1 cut(s) 1390
BsiHKAI GWGCWC 3 cut(s) 107, 1866, 2006
BsiSI CCGG 3 cut(s) 92, 206, 2032
BslFI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
BslI CCNNNNNNNGG 5 cut(s) 1496, 1614, 1906, 2006, 2054
BsmAI GTCTC 2 cut(s) 1472, 1544
BsmFI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
BsmI GAATGC 1 cut(s) 2043
BsnI GGCC 5 cut(s) 14, 785, 1372, 1489, 1503
Bso31I GGTCTC 1 cut(s) 1472
Bsp1286I GDGCHC 4 cut(s) 107, 1866, 2006, 2101
Bsp13I TCCGGA 1 cut(s) 205
Bsp1407I TGTACA 2 cut(s) 24, 303
Bsp143I GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Bsp1720I GCTNAGC 1 cut(s) 1860
Bsp19I CCATGG 1 cut(s) 1414
BspACI CCGC 2 cut(s) 465, 1615
BspANI GGCC 5 cut(s) 14, 785, 1372, 1489, 1503
BspCNI CTCAG 6 cut(s) 232, 364, 1414, 1540, 1588, 1852
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 1 cut(s) 88
BspHI TCATGA 1 cut(s) 948
BspLI GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
BspMAI CTGCAG 2 cut(s) 1444, 1583
BspMI ACCTGC 2 cut(s) 1612, 1702
BspPI GGATC 4 cut(s) 629, 1202, 1360, 1917
BspT107I GGYRCC 2 cut(s) 467, 2096
BspTI CTTAAG 2 cut(s) 892, 1841
BspTNI GGTCTC 1 cut(s) 1472
BsrBI CCGCTC 1 cut(s) 1615
BsrDI GCAATG 2 cut(s) 500, 1788
BsrFI RCCGGY 1 cut(s) 2031
BsrGI TGTACA 2 cut(s) 24, 303
BsrI ACTGG 5 cut(s) 231, 471, 638, 1020, 1814
BssAI RCCGGY 1 cut(s) 2031
BssECI CCNNGG 3 cut(s) 15, 1414, 1608
BssMI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BssSI CACGAG 1 cut(s) 1213
BssT1I CCWWGG 3 cut(s) 15, 1414, 1608
Bst2BI CACGAG 1 cut(s) 1213
Bst2UI CCWGG 2 cut(s) 1778, 1907
Bst6I CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
BstAFI CTTAAG 2 cut(s) 892, 1841
BstAPI GCANNNNNTGC 2 cut(s) 998, 1154
BstAUI TGTACA 2 cut(s) 24, 303
BstBAI YACGTR 2 cut(s) 314, 998
BstC8I GCNNGC 5 cut(s) 247, 251, 421, 1260, 1838
BstDSI CCRYGG 1 cut(s) 1414
BstF5I GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BstFNI CGCG 1 cut(s) 88
BstH2I RGCGCY 1 cut(s) 1485
BstHHI GCGC 2 cut(s) 1484, 1836
BstKTI GATC 9 cut(s) 274, 637, 768, 939, 1210, 1355, 1390, 1595, 1912
BstMAI GTCTC 2 cut(s) 1472, 1544
BstMBI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
BstMCI CGRYCG 1 cut(s) 1390
BstMWI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
BstNI CCWGG 2 cut(s) 1778, 1907
BstNSI RCATGY 1 cut(s) 423
BstSCI CCNGG 2 cut(s) 1776, 1905
BstSFI CTRYAG 3 cut(s) 1356, 1440, 1579
BstSLI GKGCMC 1 cut(s) 2101
BstUI CGCG 1 cut(s) 88
BstV1I GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
BstV2I GAAGAC 2 cut(s) 489, 1779
BstX2I RGATCY 3 cut(s) 634, 1352, 1909
BstYI RGATCY 3 cut(s) 634, 1352, 1909
BsuI GTATCC 1 cut(s) 1799
BsuRI GGCC 5 cut(s) 14, 785, 1372, 1489, 1503
BtgI CCRYGG 1 cut(s) 1414
BtgZI GCGATG 1 cut(s) 1659
BtsCI GGATG 8 cut(s) 46, 128, 355, 1047, 1243, 1293, 1744, 1888
BtsI GCAGTG 2 cut(s) 1437, 1684
BtsIMutI CAGTG 7 cut(s) 478, 645, 1013, 1437, 1684, 1740, 2111
BveI ACCTGC 2 cut(s) 1612, 1702
Cac8I GCNNGC 5 cut(s) 247, 251, 421, 1260, 1838
CaiI CAGNNNCTG 3 cut(s) 477, 743, 1906
CciI TCATGA 1 cut(s) 948
CfoI GCGC 2 cut(s) 1484, 1836
Cfr10I RCCGGY 1 cut(s) 2031
Cfr13I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
CseI GACGC 2 cut(s) 77, 749
Csp6I GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
CspCI CAANNNNNGTGG 2 cut(s) 1480, 1515
CviQI GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
DpnI GATC 9 cut(s) 273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
DpnII GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
DraIII CACNNNGTG 1 cut(s) 809
EaeI YGGCCR 2 cut(s) 12, 783
Eam1104I CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
EarI CTCTTC 4 cut(s) 1576, 1644, 1716, 1758
Ecl136II GAGCTC 1 cut(s) 105
Eco130I CCWWGG 3 cut(s) 15, 1414, 1608
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 1 cut(s) 1472
Eco32I GATATC 1 cut(s) 537
Eco47I GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
Eco47III AGCGCT 1 cut(s) 1483
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 1442
EcoICRI GAGCTC 1 cut(s) 105
EcoO109I RGGNCCY 2 cut(s) 1601, 2081
EcoRI GAATTC 1 cut(s) 426
EcoRII CCWGG 2 cut(s) 1776, 1905
EcoRV GATATC 1 cut(s) 537
EcoT14I CCWWGG 3 cut(s) 15, 1414, 1608
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 3 cut(s) 15, 1414, 1608
FalI AAGNNNNNCTT 2 cut(s) 1440, 1472
FaqI GGGAC 6 cut(s) 226, 1091, 1432, 1614, 2020, 2067
FauNDI CATATG 1 cut(s) 255
FblI GTMKAC 1 cut(s) 1748
Fnu4HI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
FokI GGATG 8 cut(s) 53, 135, 362, 1034, 1250, 1300, 1751, 1895
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
FspBI CTAG 2 cut(s) 1320, 1926
GlaI GCGC 2 cut(s) 1483, 1835
GluI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
GsaI CCCAGC 2 cut(s) 509, 1025
HaeII RGCGCY 1 cut(s) 1485
HaeIII GGCC 5 cut(s) 14, 785, 1372, 1489, 1503
HapII CCGG 3 cut(s) 92, 206, 2032
HgaI GACGC 2 cut(s) 77, 749
HhaI GCGC 2 cut(s) 1484, 1836
Hin6I GCGC 2 cut(s) 1482, 1834
HinP1I GCGC 2 cut(s) 1482, 1834
HincII GTYRAC 2 cut(s) 155, 1132
HindII GTYRAC 2 cut(s) 155, 1132
HindIII AAGCTT 1 cut(s) 1838
HpaII CCGG 3 cut(s) 92, 206, 2032
HphI GGTGA 1 cut(s) 1578
Hpy166II GTNNAC 6 cut(s) 155, 290, 695, 889, 1132, 1749
Hpy188I TCNGA 9 cut(s) 399, 739, 1052, 1061, 1329, 1597, 1759, 1816, 1945
Hpy188III TCNNGA 7 cut(s) 145, 206, 431, 830, 949, 1070, 1303
Hpy8I GTNNAC 6 cut(s) 155, 290, 695, 889, 1132, 1749
HpyAV CCTTC 8 cut(s) 61, 151, 433, 785, 875, 942, 1612, 2052
HpyCH4IV ACGT 4 cut(s) 180, 313, 997, 1791
HpyF10VI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
HpySE526I ACGT 4 cut(s) 180, 313, 997, 1791
HspAI GCGC 2 cut(s) 1482, 1834
KflI GGGWCCC 1 cut(s) 2081
Kpn2I TCCGGA 1 cut(s) 205
Kzo9I GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
LmnI GCTCC 2 cut(s) 1612, 1831
Lsp1109I GCAGC 6 cut(s) 1132, 1157, 1274, 1565, 1593, 1653
LweI GCATC 5 cut(s) 113, 352, 1108, 1333, 1813
MaeI CTAG 2 cut(s) 1320, 1926
MaeII ACGT 4 cut(s) 180, 313, 997, 1791
MaeIII GTNAC 2 cut(s) 448, 1225
MalI GATC 9 cut(s) 273, 636, 767, 938, 1209, 1354, 1389, 1594, 1911
MbiI CCGCTC 1 cut(s) 1615
MboI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
MflI RGATCY 3 cut(s) 634, 1352, 1909
MhlI GDGCHC 4 cut(s) 107, 1866, 2006, 2101
MlsI TGGCCA 1 cut(s) 785
MluI ACGCGT 1 cut(s) 86
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 5 cut(s) 17, 80, 539, 1754, 1943
Mox20I TGGCCA 1 cut(s) 785
MroI TCCGGA 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 885
MscI TGGCCA 1 cut(s) 785
MseI TTAA 6 cut(s) 893, 900, 1116, 1478, 1691, 1842
MslI CAYNNNNRTG 2 cut(s) 32, 530
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 1 cut(s) 686
MspCI CTTAAG 2 cut(s) 892, 1841
MspI CCGG 3 cut(s) 92, 206, 2032
MspR9I CCNGG 2 cut(s) 1778, 1907
Mva1269I GAATGC 1 cut(s) 2043
MvaI CCWGG 2 cut(s) 1778, 1907
MvnI CGCG 1 cut(s) 88
MwoI GCNNNNNNNGC 3 cut(s) 474, 998, 1154
NcoI CCATGG 1 cut(s) 1414
NdeI CATATG 1 cut(s) 255
NdeII GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
NlaIV GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
NspI RCATGY 1 cut(s) 423
OliI CACNNNNGTG 1 cut(s) 530
PaeI GCATGC 1 cut(s) 423
PagI TCATGA 1 cut(s) 948
PcsI WCGNNNNNNNCGW 1 cut(s) 85
PctI GAATGC 1 cut(s) 2043
PdmI GAANNNNTTC 1 cut(s) 885
PfeI GAWTC 7 cut(s) 443, 522, 550, 795, 866, 1379, 1453
PflMI CCANNNNNTGG 1 cut(s) 1906
PkrI GCNGC 7 cut(s) 467, 1147, 1172, 1264, 1580, 1583, 1643
Ple19I CGATCG 1 cut(s) 1390
PleI GAGTC 5 cut(s) 16, 79, 539, 1753, 1942
PpsI GAGTC 5 cut(s) 16, 79, 539, 1753, 1942
Ppu21I YACGTR 2 cut(s) 314, 998
PpuMI RGGWCCY 2 cut(s) 1601, 2081
Psp124BI GAGCTC 1 cut(s) 107
Psp5II RGGWCCY 2 cut(s) 1601, 2081
Psp6I CCWGG 2 cut(s) 1776, 1905
PspFI CCCAGC 2 cut(s) 505, 1021
PspGI CCWGG 2 cut(s) 1776, 1905
PspN4I GGNNCC 8 cut(s) 469, 1020, 1253, 1602, 2036, 2082, 2083, 2098
PspPI GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
PspPPI RGGWCCY 2 cut(s) 1601, 2081
PsrI GAACNNNNNNTAC 2 cut(s) 870, 902
PstI CTGCAG 2 cut(s) 1444, 1583
PstNI CAGNNNCTG 3 cut(s) 477, 743, 1906
PsuI RGATCY 3 cut(s) 634, 1352, 1909
PvuI CGATCG 1 cut(s) 1390
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 9 cut(s) 26, 291, 305, 316, 377, 456, 754, 996, 1046
RsaNI GTAC 9 cut(s) 25, 290, 304, 315, 376, 455, 753, 995, 1045
RseI CAYNNNNRTG 2 cut(s) 32, 530
SacI GAGCTC 1 cut(s) 107
SaqAI TTAA 6 cut(s) 893, 900, 1116, 1478, 1691, 1842
SatI GCNGC 7 cut(s) 466, 1146, 1171, 1263, 1579, 1582, 1642
Sau3AI GATC 9 cut(s) 271, 634, 765, 936, 1207, 1352, 1387, 1592, 1909
Sau96I GGNCC 8 cut(s) 389, 770, 1018, 1488, 1502, 1601, 2034, 2081
ScaI AGTACT 2 cut(s) 456, 754
SchI GAGTC 5 cut(s) 17, 80, 539, 1754, 1943
ScrFI CCNGG 2 cut(s) 1778, 1907
SduI GDGCHC 4 cut(s) 107, 1866, 2006, 2101
SfaNI GCATC 5 cut(s) 113, 352, 1108, 1333, 1813
SfcI CTRYAG 3 cut(s) 1356, 1440, 1579
SinI GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
SmiMI CAYNNNNRTG 2 cut(s) 32, 530
SmlI CTYRAG 2 cut(s) 892, 1841
SmoI CTYRAG 2 cut(s) 892, 1841
SphI GCATGC 1 cut(s) 423
SsiI CCGC 2 cut(s) 465, 1615
SspMI CTAG 2 cut(s) 1320, 1926
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 1776, 1905
StyI CCWWGG 3 cut(s) 15, 1414, 1608
TaiI ACGT 4 cut(s) 183, 316, 1000, 1794
TaqI TCGA 7 cut(s) 79, 133, 430, 548, 749, 935, 1386
TaqII GACCGA 1 cut(s) 758
TatI WGTACW 6 cut(s) 24, 303, 375, 454, 752, 1044
TauI GCSGC 1 cut(s) 468
TfiI GAWTC 7 cut(s) 443, 522, 550, 795, 866, 1379, 1453
Tru1I TTAA 6 cut(s) 893, 900, 1116, 1478, 1691, 1842
Tru9I TTAA 6 cut(s) 893, 900, 1116, 1478, 1691, 1842
TscAI CASTG 7 cut(s) 478, 645, 1020, 1444, 1684, 1740, 2111
TseI GCWGC 6 cut(s) 1145, 1170, 1262, 1578, 1581, 1641
TspGWI ACGGA 3 cut(s) 451, 1166, 1844
TspRI CASTG 7 cut(s) 478, 645, 1020, 1444, 1684, 1740, 2111
Van91I CCANNNNNTGG 1 cut(s) 1906
Vha464I CTTAAG 2 cut(s) 892, 1841
VpaK11BI GGWCC 6 cut(s) 389, 770, 1018, 1601, 2034, 2081
XapI RAATTY 1 cut(s) 426
XceI RCATGY 1 cut(s) 423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1882
XmiI GTMKAC 1 cut(s) 1748
XmnI GAANNNNTTC 1 cut(s) 885
XspI CTAG 2 cut(s) 1320, 1926
ZrmI AGTACT 2 cut(s) 456, 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.