Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002315

Physical Location & Seq

Genomic Coordinates Reverse (-)

4675133 .. 4679603

Gene Structure 4471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G065100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGGTGAAGGGACTGCAACAACAAGGGCAAAACCTGCCACCGGATTTGACCCAAGTCATTGATCAGCTGGAGCGCCACTGCTTGGCACCCGATGGTTCTCTCGTCTCCAAATCAGCCTACTTCGACCTCCAACTCGCAAGGGAGGAAATGTCCAGAGAAAGATTGCGTTACTTGGAAGCCATGGCAATTTATGGTGAGGCAATTGCAATGGTGGAAGAATATCAACAAGCAGTTTCGGTGGCTAATCTTGGAGGAATTCGAGATGTTCAGGGTTTATATCTGCAATCGGACTTGAAGAATCCTCCTCAGTTGTACGAGACATTGGAGCATCGCATGATTGTTGCGGAAGCAGCTCAAAGATTGAGGCTTCCTCTTATCTCCAAAGATGGTGAAATTCATGAGGAAGAAATTGAAAAATGCAGTACGATGTCACGTAGTTCCCTTGACAGTATCAGTACCAGCGTTACAATCAGCTCAAGTTCCAACTCAACCAATTTTAATACTGCTACTAGCACCAGTAGTGCAGCAAACAACAATCTTTCTCTTAATGCTACTGATGCTGTGGAATCTGGAGTTGGTGGTGTTCCGAATCGCTTTCTTGGAATTACACCTGCATATTTATGGCAAACACAGCTCCAGCAAACACCATTGTCAATGGACATGACAGAATATCAGTTGTGTCTTTCTCGGGAGATTGAAGTCCGTTTAGTAGCTAAATGTGATAAATTAGCTGATGCCTTTATAATGGATGACAATGACTCGTCATCTGGGCATCAGAATTCAAGTTCTTGCCTTCCAGAAAGGGTGAAGTTGATAATTGAGGAGATGGAAAGGGAGGAAGCAGCTCTGCGGGAAGATCTATATTCTGCGGATAGAAAATTTGCTGAATATTATAATGTCCTAGAGCAGATACTGGGAGTGCTCATCAAACTGGTCAGAGATTTGAAGTTGCAACATCAACATCAATATGACGGACTGCAAAAAACATGGCTTTGCAAGAGGTGTGAGACGATGAGTGCAAAATTGAGGGTTCTGGAGCATGTTCTCCTTCTTGAAACTTATACTAAGGAGTCAATACCGGCCCTACATAAAATAAGGAAGTATCTCCTTGAAGCTACAGATGAAGCTTCAATCGCGTATAATAAAGCGGTTACACGTCTTAGAGAATATCAGGGTGTTGATCCTCACTTTGATTCAATTGCAAGGCAGTACCATGATATTGTAAAGAAATTGGAAAATATGCAATGGACAATCGACCAAATTGAAATGGACCTGACACACCAAGATCACGTAAATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0051011 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS4

Protein Analysis

434

Amino Acids

49.14

Weight (kDa)

5.09

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50710
fragaria_vesca	FvH4_3g22760 FvH4_3g22760 FvH4_3g22760 FvH4_6g31880 FvH4_6g31880
malus_domestica	MD03G1200100.v1.1 MD17G1190200.v1.1
prunus_persica	Prupe.3G065100_v2.0.a1 Prupe.4G214200_v2.0.a1 Prupe.4G214200_v2.0.a1 Prupe.4G214200_v2.0.a1 Prupe.4G214200_v2.0.a1
pyrus_communis	pycom17g19770
rosa_chinensis	RchiOBHm_Chr2g0139231 RchiOBHm_Chr5g0039771
rosa_laevigata	RLG00000019565 RLG00000019711 RLG00000019797 RLG00000033942
rosa_multiflora	Rmu_sc0000103.1_g000018 Rmu_sc0001803.1_g000002 Rmu_sc0042828.1_g000001
rosa_roxburghii	Rroxscaffold_1G00041440 Rroxscaffold_2G00105540
rosa_rugosa	Rorug02G0355600 Rorug02G0355700 Rorug05G0182400 Rorug05G0182400 Rorug05G0182800
rosa_samantha	Rh2AG405800 Rh2BG404900 Rh2BG411100 Rh2BG416400 Rh2CG392000 Rh5AG268500 Rh5BG272800 Rh5CG305400 Rh5DG280700
rosa_wichuraiana	Rw2G032880 Rw2G033150 Rw5G025110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	743, 894
AarI	CACCTGC	1 cut(s)	619
Acc36I	ACCTGC	2 cut(s)	42, 619
AccB1I	GGYRCC	1 cut(s)	85
AccB7I	CCANNNNNTGG	1 cut(s)	82
AccII	CGCG	1 cut(s)	1136
AciI	CCGC	4 cut(s)	344, 850, 869, 1148
AclWI	GGATC	1 cut(s)	1175
AcsI	RAATTY	4 cut(s)	255, 393, 778, 878
AfaI	GTAC	4 cut(s)	314, 424, 457, 1211
AfiI	CCNNNNNNNGG	2 cut(s)	40, 82
AflIII	ACRYGT	1 cut(s)	1154
AjiI	CACGTC	1 cut(s)	1157
AjuI	GAANNNNNNNTTGG	2 cut(s)	558, 590
AluBI	AGCT	9 cut(s)	67, 353, 474, 634, 713, 731, 845, 1115, 1127
AluI	AGCT	9 cut(s)	67, 353, 474, 634, 713, 731, 845, 1115, 1127
Alw21I	GWGCWC	1 cut(s)	924
Alw26I	GTCTC	3 cut(s)	109, 311, 1001
AlwI	GGATC	1 cut(s)	1175
AlwNI	CAGNNNCTG	1 cut(s)	913
Ama87I	CYCGRG	1 cut(s)	687
AoxI	GGCC	1 cut(s)	1080
ApeKI	GCWGC	3 cut(s)	350, 524, 842
ApoI	RAATTY	4 cut(s)	255, 393, 778, 878
AspLEI	GCGC	1 cut(s)	75
AspS9I	GGNCC	2 cut(s)	1081, 1270
AsuHPI	GGTGA	4 cut(s)	16, 206, 401, 817
AvaI	CYCGRG	1 cut(s)	687
AvaII	GGWCC	1 cut(s)	1270
BanI	GGYRCC	1 cut(s)	85
Bbv12I	GWGCWC	1 cut(s)	924
BbvI	GCAGC	3 cut(s)	362, 536, 854
BccI	CCATC	3 cut(s)	86, 380, 820
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	3 cut(s)	109, 311, 1001
BfaI	CTAG	2 cut(s)	510, 902
BfmI	CTRYAG	1 cut(s)	1116
BfoI	RGCGCY	1 cut(s)	76
BfuAI	ACCTGC	2 cut(s)	42, 619
BglII	AGATCT	1 cut(s)	856
BisI	GCNGC	3 cut(s)	351, 525, 843
BlsI	GCNGC	3 cut(s)	352, 526, 844
Bme18I	GGWCC	1 cut(s)	1270
BmeT110I	CYCGRG	1 cut(s)	687
BmgBI	CACGTC	1 cut(s)	1157
BmgT120I	GGNCC	2 cut(s)	1081, 1270
BmiI	GGNNCC	1 cut(s)	87
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	4 cut(s)	337, 547, 724, 781
BmuI	ACTGGG	1 cut(s)	923
BoxI	GACNNNNGTC	1 cut(s)	53
BplI	GAGNNNNNCTC	2 cut(s)	355, 387
BpmI	CTGGAG	4 cut(s)	89, 591, 620, 1055
BpuEI	CTTGAG	1 cut(s)	460
BsaAI	YACGTR	2 cut(s)	434, 1291
BsaJI	CCNNGG	1 cut(s)	180
BsaWI	WCCGGW	1 cut(s)	40
BsaXI	ACNNNNNCTCC	2 cut(s)	134, 164
Bsc4I	CCNNNNNNNGG	2 cut(s)	40, 82
Bse118I	RCCGGY	1 cut(s)	1078
Bse1I	ACTGG	3 cut(s)	516, 918, 936
Bse3DI	GCAATG	2 cut(s)	213, 1250
BseDI	CCNNGG	1 cut(s)	180
BseGI	GGATG	1 cut(s)	754
BseLI	CCNNNNNNNGG	2 cut(s)	40, 82
BseMI	GCAATG	2 cut(s)	213, 1250
BseMII	CTCAG	1 cut(s)	320
BseNI	ACTGG	3 cut(s)	516, 918, 936
BseRI	GAGGAG	2 cut(s)	294, 836
BseXI	GCAGC	3 cut(s)	362, 536, 854
BsgI	GTGCAG	1 cut(s)	543
Bsh1236I	CGCG	1 cut(s)	1136
BshFI	GGCC	1 cut(s)	1082
BshNI	GGYRCC	1 cut(s)	85
BsiHKAI	GWGCWC	1 cut(s)	924
BsiHKCI	CYCGRG	1 cut(s)	687
BsiSI	CCGG	2 cut(s)	41, 1079
BslFI	GGGAC	1 cut(s)	24
BslI	CCNNNNNNNGG	2 cut(s)	40, 82
BsmAI	GTCTC	3 cut(s)	109, 311, 1001
BsmBI	CGTCTC	2 cut(s)	109, 1001
BsmFI	GGGAC	1 cut(s)	24
BsnI	GGCC	1 cut(s)	1082
BsoBI	CYCGRG	1 cut(s)	687
Bsp1286I	GDGCHC	1 cut(s)	924
Bsp143I	GATC	4 cut(s)	61, 856, 1180, 1285
Bsp19I	CCATGG	1 cut(s)	180
BspACI	CCGC	4 cut(s)	344, 850, 869, 1148
BspANI	GGCC	1 cut(s)	1082
BspCNI	CTCAG	1 cut(s)	319
BspFNI	CGCG	1 cut(s)	1136
BspHI	TCATGA	1 cut(s)	397
BspLI	GGNNCC	1 cut(s)	87
BspMI	ACCTGC	2 cut(s)	42, 619
BspPI	GGATC	1 cut(s)	1175
BspT107I	GGYRCC	1 cut(s)	85
BsrDI	GCAATG	2 cut(s)	213, 1250
BsrFI	RCCGGY	1 cut(s)	1078
BsrI	ACTGG	3 cut(s)	516, 918, 936
BssAI	RCCGGY	1 cut(s)	1078
BssECI	CCNNGG	1 cut(s)	180
BssMI	GATC	4 cut(s)	61, 856, 1180, 1285
BssT1I	CCWWGG	1 cut(s)	180
Bst4CI	ACNGT	1 cut(s)	449
BstAPI	GCANNNNNTGC	1 cut(s)	34
BstBAI	YACGTR	2 cut(s)	434, 1291
BstDEI	CTNAG	3 cut(s)	306, 1065, 1160
BstDSI	CCRYGG	1 cut(s)	180
BstF5I	GGATG	1 cut(s)	754
BstFNI	CGCG	1 cut(s)	1136
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	1 cut(s)	75
BstKTI	GATC	4 cut(s)	64, 859, 1183, 1288
BstMAI	GTCTC	3 cut(s)	109, 311, 1001
BstMBI	GATC	4 cut(s)	61, 856, 1180, 1285
BstMWI	GCNNNNNNNGC	5 cut(s)	34, 350, 557, 631, 1133
BstNSI	RCATGY	1 cut(s)	1043
BstPAI	GACNNNNGTC	1 cut(s)	53
BstSFI	CTRYAG	1 cut(s)	1116
BstUI	CGCG	1 cut(s)	1136
BstV1I	GCAGC	3 cut(s)	362, 536, 854
BstX2I	RGATCY	1 cut(s)	856
BstYI	RGATCY	1 cut(s)	856
BsuRI	GGCC	1 cut(s)	1082
BtgI	CCRYGG	1 cut(s)	180
BtgZI	GCGATG	1 cut(s)	314
BtrI	CACGTC	1 cut(s)	1157
BtsCI	GGATG	1 cut(s)	754
BtsI	GCAGTG	1 cut(s)	76
BtsIMutI	CAGTG	1 cut(s)	76
BveI	ACCTGC	2 cut(s)	42, 619
CaiI	CAGNNNCTG	1 cut(s)	913
CciI	TCATGA	1 cut(s)	397
CfoI	GCGC	1 cut(s)	75
Cfr10I	RCCGGY	1 cut(s)	1078
Cfr13I	GGNCC	2 cut(s)	1081, 1270
Csp6I	GTAC	4 cut(s)	313, 423, 456, 1210
CspCI	CAANNNNNGTGG	2 cut(s)	27, 62
CviAII	CATG	7 cut(s)	181, 334, 398, 661, 987, 1040, 1214
CviQI	GTAC	4 cut(s)	313, 423, 456, 1210
DdeI	CTNAG	3 cut(s)	306, 1065, 1160
DpnI	GATC	4 cut(s)	63, 858, 1182, 1287
DpnII	GATC	4 cut(s)	61, 856, 1180, 1285
Eco130I	CCWWGG	1 cut(s)	180
Eco47I	GGWCC	1 cut(s)	1270
Eco88I	CYCGRG	1 cut(s)	687
EcoRI	GAATTC	2 cut(s)	255, 778
EcoT14I	CCWWGG	1 cut(s)	180
EcoT22I	ATGCAT	1 cut(s)	1300
ErhI	CCWWGG	1 cut(s)	180
Esp3I	CGTCTC	2 cut(s)	109, 1001
FaeI	CATG	7 cut(s)	184, 337, 401, 664, 990, 1043, 1217
FaqI	GGGAC	1 cut(s)	24
FatI	CATG	7 cut(s)	180, 333, 397, 660, 986, 1039, 1213
FauI	CCCGC	1 cut(s)	843
FbaI	TGATCA	1 cut(s)	61
Fnu4HI	GCNGC	3 cut(s)	351, 525, 843
FokI	GGATG	1 cut(s)	761
Fsp4HI	GCNGC	3 cut(s)	351, 525, 843
FspBI	CTAG	2 cut(s)	510, 902
GlaI	GCGC	1 cut(s)	74
GluI	GCNGC	3 cut(s)	351, 525, 843
GsuI	CTGGAG	4 cut(s)	89, 591, 620, 1055
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	1 cut(s)	1082
HapII	CCGG	2 cut(s)	41, 1079
HhaI	GCGC	1 cut(s)	75
Hin1II	CATG	7 cut(s)	184, 337, 401, 664, 990, 1043, 1217
Hin6I	GCGC	1 cut(s)	73
HinP1I	GCGC	1 cut(s)	73
HindIII	AAGCTT	1 cut(s)	1125
HinfI	GANTC	6 cut(s)	298, 566, 589, 758, 1070, 1193
HpaII	CCGG	2 cut(s)	41, 1079
HphI	GGTGA	4 cut(s)	16, 206, 401, 817
Hpy188I	TCNGA	4 cut(s)	289, 588, 777, 938
Hpy188III	TCNNGA	8 cut(s)	153, 260, 398, 570, 689, 797, 1034, 1052
HpyAV	CCTTC	2 cut(s)	803, 1058
HpyCH4III	ACNGT	1 cut(s)	449
HpyCH4IV	ACGT	3 cut(s)	433, 1156, 1290
HpyF10VI	GCNNNNNNNGC	5 cut(s)	34, 350, 557, 631, 1133
HpyF3I	CTNAG	3 cut(s)	306, 1065, 1160
HpySE526I	ACGT	3 cut(s)	433, 1156, 1290
Hsp92II	CATG	7 cut(s)	184, 337, 401, 664, 990, 1043, 1217
HspAI	GCGC	1 cut(s)	73
Ksp22I	TGATCA	1 cut(s)	61
Kzo9I	GATC	4 cut(s)	61, 856, 1180, 1285
LmnI	GCTCC	4 cut(s)	70, 325, 639, 1036
Lsp1109I	GCAGC	3 cut(s)	362, 536, 854
LweI	GCATC	4 cut(s)	337, 547, 724, 781
MaeI	CTAG	2 cut(s)	510, 902
MaeII	ACGT	3 cut(s)	433, 1156, 1290
MaeIII	GTNAC	4 cut(s)	167, 429, 463, 1150
MalI	GATC	4 cut(s)	63, 858, 1182, 1287
MboI	GATC	4 cut(s)	61, 856, 1180, 1285
MboII	GAAGA	4 cut(s)	227, 307, 416, 866
MfeI	CAATTG	2 cut(s)	201, 1197
MflI	RGATCY	1 cut(s)	856
MhlI	GDGCHC	1 cut(s)	924
MlyI	GAGTC	2 cut(s)	752, 1079
MmeI	TCCRAC	2 cut(s)	154, 507
Mph1103I	ATGCAT	1 cut(s)	1300
MseI	TTAA	2 cut(s)	498, 546
MslI	CAYNNNNRTG	3 cut(s)	619, 966, 1293
MspA1I	CMGCKG	1 cut(s)	67
MspI	CCGG	2 cut(s)	41, 1079
MunI	CAATTG	2 cut(s)	201, 1197
MvnI	CGCG	1 cut(s)	1136
MwoI	GCNNNNNNNGC	5 cut(s)	34, 350, 557, 631, 1133
NcoI	CCATGG	1 cut(s)	180
NdeII	GATC	4 cut(s)	61, 856, 1180, 1285
NlaIII	CATG	7 cut(s)	184, 337, 401, 664, 990, 1043, 1217
NlaIV	GGNNCC	1 cut(s)	87
NmuCI	GTSAC	1 cut(s)	429
NsiI	ATGCAT	1 cut(s)	1300
NspI	RCATGY	1 cut(s)	1043
PagI	TCATGA	1 cut(s)	397
PaqCI	CACCTGC	1 cut(s)	619
PfeI	GAWTC	4 cut(s)	298, 566, 589, 1193
PflMI	CCANNNNNTGG	1 cut(s)	82
PkrI	GCNGC	3 cut(s)	352, 526, 844
PleI	GAGTC	2 cut(s)	752, 1078
PpsI	GAGTC	2 cut(s)	752, 1078
Ppu21I	YACGTR	2 cut(s)	434, 1291
PshAI	GACNNNNGTC	1 cut(s)	53
PsiI	TTATAA	2 cut(s)	743, 894
PspN4I	GGNNCC	1 cut(s)	87
PspPI	GGNCC	2 cut(s)	1081, 1270
PstNI	CAGNNNCTG	1 cut(s)	913
PsuI	RGATCY	1 cut(s)	856
PvuII	CAGCTG	1 cut(s)	67
RsaI	GTAC	4 cut(s)	314, 424, 457, 1211
RsaNI	GTAC	4 cut(s)	313, 423, 456, 1210
RseI	CAYNNNNRTG	3 cut(s)	619, 966, 1293
SaqAI	TTAA	2 cut(s)	498, 546
SatI	GCNGC	3 cut(s)	351, 525, 843
Sau3AI	GATC	4 cut(s)	61, 856, 1180, 1285
Sau96I	GGNCC	2 cut(s)	1081, 1270
SchI	GAGTC	2 cut(s)	752, 1079
SduI	GDGCHC	1 cut(s)	924
SfaNI	GCATC	4 cut(s)	337, 547, 724, 781
SfcI	CTRYAG	1 cut(s)	1116
SinI	GGWCC	1 cut(s)	1270
SmiMI	CAYNNNNRTG	3 cut(s)	619, 966, 1293
SmlI	CTYRAG	1 cut(s)	475
SmoI	CTYRAG	1 cut(s)	475
SsiI	CCGC	4 cut(s)	344, 850, 869, 1148
SspI	AATATT	1 cut(s)	890
SspMI	CTAG	2 cut(s)	510, 902
StyI	CCWWGG	1 cut(s)	180
TaaI	ACNGT	1 cut(s)	449
TaiI	ACGT	3 cut(s)	436, 1159, 1293
TaqI	TCGA	3 cut(s)	123, 259, 1254
TfiI	GAWTC	4 cut(s)	298, 566, 589, 1193
Tru1I	TTAA	2 cut(s)	498, 546
Tru9I	TTAA	2 cut(s)	498, 546
TscAI	CASTG	1 cut(s)	83
TseFI	GTSAC	1 cut(s)	429
TseI	GCWGC	3 cut(s)	350, 524, 842
Tsp45I	GTSAC	1 cut(s)	429
TspDTI	ATGAA	2 cut(s)	386, 1137
TspGWI	ACGGA	2 cut(s)	692, 987
TspRI	CASTG	1 cut(s)	83
Van91I	CCANNNNNTGG	1 cut(s)	82
VpaK11BI	GGWCC	1 cut(s)	1270
XapI	RAATTY	4 cut(s)	255, 393, 778, 878
XceI	RCATGY	1 cut(s)	1043
XspI	CTAG	2 cut(s)	510, 902
Zsp2I	ATGCAT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.