Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04520 AT5G35680 AT5G35680 AT5G35680 |
| fragaria_vesca | FvH4_6g30180 FvH4_6g41720 |
| malus_domestica | MD17G1108800.v1.1 MD17G1109000.v1.1 |
| prunus_persica | Prupe.3G206200_v2.0.a1 Prupe.3G206200_v2.0.a1 |
| pyrus_communis | pycom09g04300 |
| rosa_chinensis | RchiOBHm_Chr2g0136391 RchiOBHm_Chr2g0157471 RchiOBHm_Chr4g0392931 |
| rosa_laevigata | RLG00000009781 RLG00000020990 |
| rosa_multiflora | Rmu_sc0000195.1_g000029 Rmu_sc0001998.1_g000014 Rmu_sc0008339.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00092170 Rroxscaffold_2G00108330 |
| rosa_rugosa | Rorug02G0196600 Rorug02G0329800 Rorug02G0461500 Rorug02G0461600 |
| rosa_samantha | Rh1DG336900 Rh2AG381000 Rh2AG525700 Rh2BG387800 Rh2CG510400 Rh2DG404100 Rh3AG162500 Rh4BG040700 Rh6AG109100 Rh7AG495100 |
| rosa_wichuraiana | Rw2G031160 Rw2G043540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 387 |
| AclWI | GGATC | 1 cut(s) | 268 |
| AcuI | CTGAAG | 1 cut(s) | 329 |
| AfaI | GTAC | 1 cut(s) | 284 |
| AflIII | ACRYGT | 1 cut(s) | 338 |
| AgsI | TTSAA | 1 cut(s) | 371 |
| AjiI | CACGTC | 1 cut(s) | 341 |
| AleI | CACNNNNGTG | 1 cut(s) | 183 |
| AluBI | AGCT | 2 cut(s) | 266, 325 |
| AluI | AGCT | 2 cut(s) | 266, 325 |
| AlwI | GGATC | 1 cut(s) | 268 |
| ApeKI | GCWGC | 1 cut(s) | 215 |
| AsuC2I | CCSGG | 1 cut(s) | 361 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| BbsI | GAAGAC | 2 cut(s) | 233, 378 |
| BbvI | GCAGC | 1 cut(s) | 227 |
| BccI | CCATC | 2 cut(s) | 86, 152 |
| BcnI | CCSGG | 1 cut(s) | 361 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| Bme1390I | CCNGG | 1 cut(s) | 361 |
| BmgBI | CACGTC | 1 cut(s) | 341 |
| BmrFI | CCNGG | 1 cut(s) | 361 |
| BmsI | GCATC | 1 cut(s) | 183 |
| BpiI | GAAGAC | 2 cut(s) | 233, 378 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| BpuMI | CCSGG | 1 cut(s) | 361 |
| BsaJI | CCNNGG | 2 cut(s) | 184, 360 |
| Bse118I | RCCGGY | 1 cut(s) | 218 |
| BseDI | CCNNGG | 2 cut(s) | 184, 360 |
| BseGI | GGATG | 2 cut(s) | 180, 421 |
| BseXI | GCAGC | 1 cut(s) | 227 |
| BseYI | CCCAGC | 1 cut(s) | 124 |
| Bsh1285I | CGRYCG | 1 cut(s) | 136 |
| BsiEI | CGRYCG | 1 cut(s) | 136 |
| BsiSI | CCGG | 2 cut(s) | 219, 360 |
| BslFI | GGGAC | 1 cut(s) | 175 |
| BsmFI | GGGAC | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 273 |
| BspACI | CCGC | 1 cut(s) | 387 |
| BspPI | GGATC | 1 cut(s) | 268 |
| BsrFI | RCCGGY | 1 cut(s) | 218 |
| BssAI | RCCGGY | 1 cut(s) | 218 |
| BssECI | CCNNGG | 2 cut(s) | 184, 360 |
| BssMI | GATC | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| Bst6I | CTCTTC | 1 cut(s) | 32 |
| BstDSI | CCRYGG | 1 cut(s) | 184 |
| BstF5I | GGATG | 2 cut(s) | 180, 421 |
| BstKTI | GATC | 1 cut(s) | 276 |
| BstMBI | GATC | 1 cut(s) | 273 |
| BstMCI | CGRYCG | 1 cut(s) | 136 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 121 |
| BstNSI | RCATGY | 1 cut(s) | 289 |
| BstSCI | CCNGG | 1 cut(s) | 359 |
| BstV1I | GCAGC | 1 cut(s) | 227 |
| BstV2I | GAAGAC | 2 cut(s) | 233, 378 |
| BtgI | CCRYGG | 1 cut(s) | 184 |
| BtrI | CACGTC | 1 cut(s) | 341 |
| BtsCI | GGATG | 2 cut(s) | 180, 421 |
| Cfr10I | RCCGGY | 1 cut(s) | 218 |
| Csp6I | GTAC | 1 cut(s) | 283 |
| CviAII | CATG | 2 cut(s) | 148, 286 |
| CviJI | RGCY | 7 cut(s) | 56, 146, 218, 266, 299, 304, 325 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 146, 218, 266, 299, 304, 325 |
| CviQI | GTAC | 1 cut(s) | 283 |
| DpnI | GATC | 1 cut(s) | 275 |
| DpnII | GATC | 1 cut(s) | 273 |
| Eam1104I | CTCTTC | 1 cut(s) | 32 |
| EarI | CTCTTC | 1 cut(s) | 32 |
| Eco32I | GATATC | 1 cut(s) | 226 |
| Eco57I | CTGAAG | 1 cut(s) | 329 |
| EcoRV | GATATC | 1 cut(s) | 226 |
| FaeI | CATG | 2 cut(s) | 151, 289 |
| FaiI | YATR | 8 cut(s) | 105, 122, 149, 287, 316, 318, 402, 436 |
| FaqI | GGGAC | 1 cut(s) | 175 |
| FatI | CATG | 2 cut(s) | 147, 285 |
| FauNDI | CATATG | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| FokI | GGATG | 2 cut(s) | 167, 428 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| FspBI | CTAG | 1 cut(s) | 300 |
| GluI | GCNGC | 1 cut(s) | 216 |
| GsaI | CCCAGC | 1 cut(s) | 128 |
| HapII | CCGG | 2 cut(s) | 219, 360 |
| Hin1II | CATG | 2 cut(s) | 151, 289 |
| HpaII | CCGG | 2 cut(s) | 219, 360 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 1 cut(s) | 309 |
| Hpy188III | TCNNGA | 4 cut(s) | 245, 254, 329, 368 |
| Hpy8I | GTNNAC | 1 cut(s) | 74 |
| HpyAV | CCTTC | 3 cut(s) | 196, 304, 377 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| HpyCH4IV | ACGT | 1 cut(s) | 340 |
| HpyCH4V | TGCA | 3 cut(s) | 153, 196, 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 121 |
| HpySE526I | ACGT | 1 cut(s) | 340 |
| Hsp92II | CATG | 2 cut(s) | 151, 289 |
| Kzo9I | GATC | 1 cut(s) | 273 |
| LpnPI | CCDG | 8 cut(s) | 19, 83, 110, 232, 239, 303, 342, 373 |
| Lsp1109I | GCAGC | 1 cut(s) | 227 |
| LweI | GCATC | 1 cut(s) | 183 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MaeII | ACGT | 1 cut(s) | 340 |
| MaeIII | GTNAC | 2 cut(s) | 128, 176 |
| MalI | GATC | 1 cut(s) | 275 |
| MboI | GATC | 1 cut(s) | 273 |
| MboII | GAAGA | 7 cut(s) | 19, 49, 101, 233, 383, 392, 431 |
| MnlI | CCTC | 7 cut(s) | 17, 35, 287, 289, 343, 370, 406 |
| MseI | TTAA | 2 cut(s) | 84, 345 |
| MslI | CAYNNNNRTG | 1 cut(s) | 183 |
| MspI | CCGG | 2 cut(s) | 219, 360 |
| MspR9I | CCNGG | 1 cut(s) | 361 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 121 |
| NciI | CCSGG | 1 cut(s) | 361 |
| NdeI | CATATG | 1 cut(s) | 316 |
| NdeII | GATC | 1 cut(s) | 273 |
| NlaIII | CATG | 2 cut(s) | 151, 289 |
| NmuCI | GTSAC | 1 cut(s) | 176 |
| NspI | RCATGY | 1 cut(s) | 289 |
| OliI | CACNNNNGTG | 1 cut(s) | 183 |
| PflFI | GACNNNGTC | 1 cut(s) | 174 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| PspFI | CCCAGC | 1 cut(s) | 124 |
| PsyI | GACNNNGTC | 1 cut(s) | 174 |
| RsaI | GTAC | 1 cut(s) | 284 |
| RsaNI | GTAC | 1 cut(s) | 283 |
| RseI | CAYNNNNRTG | 1 cut(s) | 183 |
| SaqAI | TTAA | 2 cut(s) | 84, 345 |
| SatI | GCNGC | 1 cut(s) | 216 |
| Sau3AI | GATC | 1 cut(s) | 273 |
| ScrFI | CCNGG | 1 cut(s) | 361 |
| SetI | ASST | 5 cut(s) | 46, 207, 268, 327, 343 |
| SfaNI | GCATC | 1 cut(s) | 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 1 cut(s) | 278 |
| SmoI | CTYRAG | 1 cut(s) | 278 |
| SsiI | CCGC | 1 cut(s) | 387 |
| SspMI | CTAG | 1 cut(s) | 300 |
| StyD4I | CCNGG | 1 cut(s) | 359 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TaiI | ACGT | 1 cut(s) | 343 |
| TatI | WGTACW | 1 cut(s) | 282 |
| Tru1I | TTAA | 2 cut(s) | 84, 345 |
| Tru9I | TTAA | 2 cut(s) | 84, 345 |
| TseFI | GTSAC | 1 cut(s) | 176 |
| TseI | GCWGC | 1 cut(s) | 215 |
| Tsp45I | GTSAC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 3 cut(s) | 66, 78, 432 |
| TspGWI | ACGGA | 1 cut(s) | 173 |
| Tth111I | GACNNNGTC | 1 cut(s) | 174 |
| XceI | RCATGY | 1 cut(s) | 289 |
| XspI | CTAG | 1 cut(s) | 300 |