transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22100 |
| fragaria_vesca | FvH4_1g29760 FvH4_6g43750 |
| malus_domestica | MD17G1091100.v1.1 |
| prunus_persica | Prupe.3G222500_v2.0.a1 |
| pyrus_communis | pycom17g08800 |
| rosa_chinensis | RchiOBHm_Chr2g0160481 |
| rosa_laevigata | RLG00000000602 RLG00000006966 RLG00000012534 RLG00000020740 RLG00000021217 RLG00000035791 |
| rosa_multiflora | Rmu_sc0002771.1_g000001 Rmu_ssc0000110.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00089790 |
| rosa_rugosa | Rorug02G0234500 Rorug02G0483400 Rorug04G0068000 |
| rosa_samantha | Rh2AG291900 Rh2AG548600 Rh2BG222400 Rh2BG562200 Rh2CG532900 Rh2DG571000 Rh7CG232200 Rh7CG308300 Rh7DG351600 |
| rosa_wichuraiana | Rw2G045420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 483 |
| AarI | CACCTGC | 1 cut(s) | 1141 |
| Acc36I | ACCTGC | 2 cut(s) | 1141, 1236 |
| AccB1I | GGYRCC | 2 cut(s) | 888, 915 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 78 |
| AccBSI | CCGCTC | 1 cut(s) | 170 |
| AccII | CGCG | 2 cut(s) | 669, 882 |
| AclI | AACGTT | 1 cut(s) | 429 |
| AclWI | GGATC | 1 cut(s) | 1251 |
| AcoI | YGGCCR | 2 cut(s) | 42, 883 |
| AcsI | RAATTY | 2 cut(s) | 239, 792 |
| AcyI | GRCGYC | 2 cut(s) | 135, 889 |
| AfaI | GTAC | 4 cut(s) | 980, 986, 1108, 1190 |
| AfeI | AGCGCT | 1 cut(s) | 1063 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 78, 357, 1006, 1116 |
| AgsI | TTSAA | 2 cut(s) | 298, 1237 |
| AjnI | CCWGG | 1 cut(s) | 999 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 817, 849 |
| AluBI | AGCT | 4 cut(s) | 870, 898, 928, 1144 |
| AluI | AGCT | 4 cut(s) | 870, 898, 928, 1144 |
| AlwI | GGATC | 1 cut(s) | 1251 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1147 |
| Ama87I | CYCGRG | 1 cut(s) | 1121 |
| Aor51HI | AGCGCT | 1 cut(s) | 1063 |
| AoxI | GGCC | 2 cut(s) | 42, 883 |
| ApeKI | GCWGC | 3 cut(s) | 361, 928, 1200 |
| ApoI | RAATTY | 2 cut(s) | 239, 792 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| AspLEI | GCGC | 3 cut(s) | 671, 891, 1064 |
| AspS9I | GGNCC | 2 cut(s) | 100, 1248 |
| AsuHPI | GGTGA | 7 cut(s) | 31, 103, 505, 774, 1003, 1030, 1083 |
| AsuII | TTCGAA | 1 cut(s) | 969 |
| AsuNHI | GCTAGC | 1 cut(s) | 866 |
| AvaI | CYCGRG | 1 cut(s) | 1121 |
| AvaII | GGWCC | 2 cut(s) | 100, 1248 |
| AxyI | CCTNAGG | 1 cut(s) | 356 |
| BalI | TGGCCA | 1 cut(s) | 44 |
| BanI | GGYRCC | 2 cut(s) | 888, 915 |
| BanII | GRGCYC | 2 cut(s) | 350, 1122 |
| BbsI | GAAGAC | 1 cut(s) | 768 |
| BbvI | GCAGC | 3 cut(s) | 348, 915, 1187 |
| BceAI | ACGGC | 1 cut(s) | 1089 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 186, 220 |
| BciT130I | CCWGG | 1 cut(s) | 1001 |
| BfaI | CTAG | 3 cut(s) | 807, 813, 867 |
| BfmI | CTRYAG | 2 cut(s) | 1148, 1240 |
| BfoI | RGCGCY | 2 cut(s) | 892, 1065 |
| BfuAI | ACCTGC | 2 cut(s) | 1141, 1236 |
| BglII | AGATCT | 1 cut(s) | 613 |
| BisI | GCNGC | 7 cut(s) | 168, 312, 362, 883, 929, 1135, 1201 |
| BlpI | GCTNAGC | 3 cut(s) | 801, 899, 1130 |
| BlsI | GCNGC | 7 cut(s) | 169, 313, 363, 884, 930, 1136, 1202 |
| Bme1390I | CCNGG | 1 cut(s) | 1001 |
| Bme18I | GGWCC | 2 cut(s) | 100, 1248 |
| BmeT110I | CYCGRG | 1 cut(s) | 1121 |
| BmgT120I | GGNCC | 2 cut(s) | 100, 1248 |
| BmiI | GGNNCC | 4 cut(s) | 102, 826, 890, 917 |
| BmrFI | CCNGG | 1 cut(s) | 1001 |
| BmsI | GCATC | 2 cut(s) | 12, 330 |
| BmtI | GCTAGC | 1 cut(s) | 870 |
| BpiI | GAAGAC | 1 cut(s) | 768 |
| BpmI | CTGGAG | 2 cut(s) | 983, 1237 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1005 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 801, 899, 1130 |
| Bpu14I | TTCGAA | 1 cut(s) | 969 |
| BpuEI | CTTGAG | 3 cut(s) | 231, 941, 1179 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1083 |
| BsaHI | GRCGYC | 2 cut(s) | 135, 889 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 253, 283, 600, 630, 817, 847 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 78, 357, 1006, 1116 |
| Bse118I | RCCGGY | 2 cut(s) | 131, 885 |
| Bse1I | ACTGG | 4 cut(s) | 475, 531, 1072, 1117 |
| Bse21I | CCTNAGG | 1 cut(s) | 356 |
| Bse3DI | GCAATG | 1 cut(s) | 204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1083 |
| BseBI | CCWGG | 1 cut(s) | 1001 |
| BseGI | GGATG | 3 cut(s) | 327, 351, 549 |
| BseJI | GATNNNNATC | 1 cut(s) | 1083 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 78, 357, 1006, 1116 |
| BseMI | GCAATG | 1 cut(s) | 204 |
| BseMII | CTCAG | 5 cut(s) | 347, 913, 1019, 1121, 1190 |
| BseNI | ACTGG | 4 cut(s) | 475, 531, 1072, 1117 |
| BseRI | GAGGAG | 4 cut(s) | 110, 202, 608, 678 |
| BseX3I | CGGCCG | 1 cut(s) | 883 |
| BseXI | GCAGC | 3 cut(s) | 348, 915, 1187 |
| Bsh1236I | CGCG | 2 cut(s) | 669, 882 |
| Bsh1285I | CGRYCG | 1 cut(s) | 886 |
| BshFI | GGCC | 2 cut(s) | 44, 885 |
| BshNI | GGYRCC | 2 cut(s) | 888, 915 |
| BsiEI | CGRYCG | 1 cut(s) | 886 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1121 |
| BsiSI | CCGG | 2 cut(s) | 132, 886 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 78, 357, 1006, 1116 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BsnI | GGCC | 2 cut(s) | 44, 885 |
| BsoBI | CYCGRG | 1 cut(s) | 1121 |
| Bsp119I | TTCGAA | 1 cut(s) | 969 |
| Bsp1286I | GDGCHC | 2 cut(s) | 350, 1122 |
| Bsp143I | GATC | 3 cut(s) | 496, 613, 1256 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 801, 899, 1130 |
| BspANI | GGCC | 2 cut(s) | 44, 885 |
| BspCNI | CTCAG | 5 cut(s) | 348, 912, 1018, 1122, 1189 |
| BspFNI | CGCG | 2 cut(s) | 669, 882 |
| BspLI | GGNNCC | 4 cut(s) | 102, 826, 890, 917 |
| BspMAI | CTGCAG | 1 cut(s) | 1152 |
| BspMI | ACCTGC | 2 cut(s) | 1141, 1236 |
| BspOI | GCTAGC | 1 cut(s) | 870 |
| BspPI | GGATC | 1 cut(s) | 1251 |
| BspQI | GCTCTTC | 1 cut(s) | 595 |
| BspT104I | TTCGAA | 1 cut(s) | 969 |
| BspT107I | GGYRCC | 2 cut(s) | 888, 915 |
| BsrBI | CCGCTC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 1 cut(s) | 204 |
| BsrFI | RCCGGY | 2 cut(s) | 131, 885 |
| BsrI | ACTGG | 4 cut(s) | 475, 531, 1072, 1117 |
| BssAI | RCCGGY | 2 cut(s) | 131, 885 |
| BssMI | GATC | 3 cut(s) | 496, 613, 1256 |
| BssNI | GRCGYC | 2 cut(s) | 135, 889 |
| Bst2UI | CCWGG | 1 cut(s) | 1001 |
| Bst4CI | ACNGT | 4 cut(s) | 524, 964, 1183, 1241 |
| Bst6I | CTCTTC | 7 cut(s) | 595, 655, 683, 775, 966, 1057, 1298 |
| BstACI | GRCGYC | 2 cut(s) | 135, 889 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1156 |
| BstBI | TTCGAA | 1 cut(s) | 969 |
| BstC8I | GCNNGC | 7 cut(s) | 133, 673, 864, 868, 880, 887, 1060 |
| BstDEI | CTNAG | 7 cut(s) | 356, 801, 899, 1005, 1130, 1176, 1230 |
| BstEII | GGTNACC | 1 cut(s) | 1009 |
| BstF5I | GGATG | 3 cut(s) | 327, 351, 549 |
| BstFNI | CGCG | 2 cut(s) | 669, 882 |
| BstH2I | RGCGCY | 2 cut(s) | 892, 1065 |
| BstHHI | GCGC | 3 cut(s) | 671, 891, 1064 |
| BstKTI | GATC | 3 cut(s) | 499, 616, 1259 |
| BstMBI | GATC | 3 cut(s) | 496, 613, 1256 |
| BstMCI | CGRYCG | 1 cut(s) | 886 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 317, 367, 533, 888, 895, 1022, 1126, 1156 |
| BstNI | CCWGG | 1 cut(s) | 1001 |
| BstPI | GGTNACC | 1 cut(s) | 1009 |
| BstSCI | CCNGG | 1 cut(s) | 999 |
| BstSFI | CTRYAG | 2 cut(s) | 1148, 1240 |
| BstUI | CGCG | 2 cut(s) | 669, 882 |
| BstV1I | GCAGC | 3 cut(s) | 348, 915, 1187 |
| BstV2I | GAAGAC | 1 cut(s) | 768 |
| BstX2I | RGATCY | 2 cut(s) | 613, 1256 |
| BstYI | RGATCY | 2 cut(s) | 613, 1256 |
| BstZI | CGGCCG | 1 cut(s) | 883 |
| Bsu36I | CCTNAGG | 1 cut(s) | 356 |
| BsuRI | GGCC | 2 cut(s) | 44, 885 |
| BtsCI | GGATG | 3 cut(s) | 327, 351, 549 |
| BtsIMutI | CAGTG | 3 cut(s) | 529, 538, 1110 |
| BveI | ACCTGC | 2 cut(s) | 1141, 1236 |
| Cac8I | GCNNGC | 7 cut(s) | 133, 673, 864, 868, 880, 887, 1060 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1147 |
| CfoI | GCGC | 3 cut(s) | 671, 891, 1064 |
| Cfr10I | RCCGGY | 2 cut(s) | 131, 885 |
| Cfr13I | GGNCC | 2 cut(s) | 100, 1248 |
| CseI | GACGC | 1 cut(s) | 124 |
| Csp6I | GTAC | 4 cut(s) | 979, 985, 1107, 1189 |
| CviAII | CATG | 5 cut(s) | 118, 517, 577, 1027, 1186 |
| CviQI | GTAC | 4 cut(s) | 979, 985, 1107, 1189 |
| DdeI | CTNAG | 7 cut(s) | 356, 801, 899, 1005, 1130, 1176, 1230 |
| DinI | GGCGCC | 1 cut(s) | 890 |
| DpnI | GATC | 3 cut(s) | 498, 615, 1258 |
| DpnII | GATC | 3 cut(s) | 496, 613, 1256 |
| EaeI | YGGCCR | 2 cut(s) | 42, 883 |
| EagI | CGGCCG | 1 cut(s) | 883 |
| Eam1104I | CTCTTC | 7 cut(s) | 595, 655, 683, 775, 966, 1057, 1298 |
| EarI | CTCTTC | 7 cut(s) | 595, 655, 683, 775, 966, 1057, 1298 |
| EciI | GGCGGA | 3 cut(s) | 101, 118, 1262 |
| EclXI | CGGCCG | 1 cut(s) | 883 |
| Eco24I | GRGCYC | 2 cut(s) | 350, 1122 |
| Eco47I | GGWCC | 2 cut(s) | 100, 1248 |
| Eco47III | AGCGCT | 1 cut(s) | 1063 |
| Eco52I | CGGCCG | 1 cut(s) | 883 |
| Eco81I | CCTNAGG | 1 cut(s) | 356 |
| Eco88I | CYCGRG | 1 cut(s) | 1121 |
| Eco91I | GGTNACC | 1 cut(s) | 1009 |
| EcoO109I | RGGNCCY | 2 cut(s) | 100, 1248 |
| EcoO65I | GGTNACC | 1 cut(s) | 1009 |
| EcoRI | GAATTC | 1 cut(s) | 239 |
| EcoRII | CCWGG | 1 cut(s) | 999 |
| EcoT38I | GRGCYC | 2 cut(s) | 350, 1122 |
| EgeI | GGCGCC | 1 cut(s) | 890 |
| EheI | GGCGCC | 1 cut(s) | 890 |
| FaeI | CATG | 5 cut(s) | 121, 520, 580, 1030, 1189 |
| FaiI | YATR | 9 cut(s) | 119, 260, 483, 518, 570, 578, 787, 1028, 1187 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 5 cut(s) | 117, 516, 576, 1026, 1185 |
| FauI | CCCGC | 1 cut(s) | 732 |
| Fnu4HI | GCNGC | 7 cut(s) | 168, 312, 362, 883, 929, 1135, 1201 |
| FokI | GGATG | 3 cut(s) | 314, 338, 536 |
| FriOI | GRGCYC | 2 cut(s) | 350, 1122 |
| Fsp4HI | GCNGC | 7 cut(s) | 168, 312, 362, 883, 929, 1135, 1201 |
| FspBI | CTAG | 3 cut(s) | 807, 813, 867 |
| GlaI | GCGC | 3 cut(s) | 670, 890, 1063 |
| GluI | GCNGC | 7 cut(s) | 168, 312, 362, 883, 929, 1135, 1201 |
| GsuI | CTGGAG | 2 cut(s) | 983, 1237 |
| HaeII | RGCGCY | 2 cut(s) | 892, 1065 |
| HaeIII | GGCC | 2 cut(s) | 44, 885 |
| HapII | CCGG | 2 cut(s) | 132, 886 |
| HgaI | GACGC | 1 cut(s) | 124 |
| HhaI | GCGC | 3 cut(s) | 671, 891, 1064 |
| Hin1I | GRCGYC | 2 cut(s) | 135, 889 |
| Hin1II | CATG | 5 cut(s) | 121, 520, 580, 1030, 1189 |
| Hin6I | GCGC | 3 cut(s) | 669, 889, 1062 |
| HinP1I | GCGC | 3 cut(s) | 669, 889, 1062 |
| HinfI | GANTC | 3 cut(s) | 572, 910, 1301 |
| HpaII | CCGG | 2 cut(s) | 132, 886 |
| HphI | GGTGA | 7 cut(s) | 31, 103, 505, 774, 1003, 1030, 1083 |
| Hpy166II | GTNNAC | 1 cut(s) | 513 |
| Hpy188I | TCNGA | 2 cut(s) | 238, 1179 |
| Hpy188III | TCNNGA | 8 cut(s) | 173, 185, 248, 331, 355, 626, 1123, 1254 |
| Hpy8I | GTNNAC | 1 cut(s) | 513 |
| Hpy99I | CGWCG | 4 cut(s) | 179, 208, 1037, 1220 |
| HpyAV | CCTTC | 7 cut(s) | 118, 160, 236, 241, 304, 453, 846 |
| HpyCH4III | ACNGT | 4 cut(s) | 524, 964, 1183, 1241 |
| HpyCH4IV | ACGT | 2 cut(s) | 429, 987 |
| HpyCH4V | TGCA | 5 cut(s) | 343, 435, 520, 1058, 1150 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 317, 367, 533, 888, 895, 1022, 1126, 1156 |
| HpyF3I | CTNAG | 7 cut(s) | 356, 801, 899, 1005, 1130, 1176, 1230 |
| HpySE526I | ACGT | 2 cut(s) | 429, 987 |
| Hsp92I | GRCGYC | 2 cut(s) | 135, 889 |
| Hsp92II | CATG | 5 cut(s) | 121, 520, 580, 1030, 1189 |
| HspAI | GCGC | 3 cut(s) | 669, 889, 1062 |
| KasI | GGCGCC | 1 cut(s) | 888 |
| KroI | GCCGGC | 2 cut(s) | 131, 885 |
| KroNI | GCCGGC | 2 cut(s) | 133, 887 |
| Kzo9I | GATC | 3 cut(s) | 496, 613, 1256 |
| LguI | GCTCTTC | 1 cut(s) | 595 |
| Lsp1109I | GCAGC | 3 cut(s) | 348, 915, 1187 |
| LweI | GCATC | 2 cut(s) | 12, 330 |
| MaeI | CTAG | 3 cut(s) | 807, 813, 867 |
| MaeII | ACGT | 2 cut(s) | 429, 987 |
| MaeIII | GTNAC | 2 cut(s) | 1009, 1036 |
| MalI | GATC | 3 cut(s) | 498, 615, 1258 |
| MbiI | CCGCTC | 1 cut(s) | 170 |
| MboI | GATC | 3 cut(s) | 496, 613, 1256 |
| MflI | RGATCY | 2 cut(s) | 613, 1256 |
| MhlI | GDGCHC | 2 cut(s) | 350, 1122 |
| MlsI | TGGCCA | 1 cut(s) | 44 |
| MluCI | AATT | 4 cut(s) | 239, 385, 637, 792 |
| MluNI | TGGCCA | 1 cut(s) | 44 |
| Mly113I | GGCGCC | 1 cut(s) | 889 |
| MlyI | GAGTC | 2 cut(s) | 566, 904 |
| Mox20I | TGGCCA | 1 cut(s) | 44 |
| MreI | CGCCGGCG | 1 cut(s) | 131 |
| MroNI | GCCGGC | 2 cut(s) | 131, 885 |
| MscI | TGGCCA | 1 cut(s) | 44 |
| MseI | TTAA | 1 cut(s) | 636 |
| MslI | CAYNNNNRTG | 1 cut(s) | 116 |
| Msp20I | TGGCCA | 1 cut(s) | 44 |
| MspI | CCGG | 2 cut(s) | 132, 886 |
| MspR9I | CCNGG | 1 cut(s) | 1001 |
| MvaI | CCWGG | 1 cut(s) | 1001 |
| MvnI | CGCG | 2 cut(s) | 669, 882 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 317, 367, 533, 888, 895, 1022, 1126, 1156 |
| NaeI | GCCGGC | 2 cut(s) | 133, 887 |
| NarI | GGCGCC | 1 cut(s) | 889 |
| NdeII | GATC | 3 cut(s) | 496, 613, 1256 |
| NgoMIV | GCCGGC | 2 cut(s) | 131, 885 |
| NheI | GCTAGC | 1 cut(s) | 866 |
| NlaIII | CATG | 5 cut(s) | 121, 520, 580, 1030, 1189 |
| NlaIV | GGNNCC | 4 cut(s) | 102, 826, 890, 917 |
| NmuCI | GTSAC | 2 cut(s) | 1009, 1036 |
| NspV | TTCGAA | 1 cut(s) | 969 |
| PaeR7I | CTCGAG | 1 cut(s) | 1121 |
| PaqCI | CACCTGC | 1 cut(s) | 1141 |
| PciSI | GCTCTTC | 1 cut(s) | 595 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 183 |
| PdiI | GCCGGC | 2 cut(s) | 133, 887 |
| PfeI | GAWTC | 1 cut(s) | 1301 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 78 |
| PkrI | GCNGC | 7 cut(s) | 169, 313, 363, 884, 930, 1136, 1202 |
| PleI | GAGTC | 2 cut(s) | 566, 904 |
| PluTI | GGCGCC | 1 cut(s) | 892 |
| PpsI | GAGTC | 2 cut(s) | 566, 904 |
| PpuMI | RGGWCCY | 2 cut(s) | 100, 1248 |
| PsiI | TTATAA | 1 cut(s) | 483 |
| Psp1406I | AACGTT | 1 cut(s) | 429 |
| Psp5II | RGGWCCY | 2 cut(s) | 100, 1248 |
| Psp6I | CCWGG | 1 cut(s) | 999 |
| PspEI | GGTNACC | 1 cut(s) | 1009 |
| PspGI | CCWGG | 1 cut(s) | 999 |
| PspN4I | GGNNCC | 4 cut(s) | 102, 826, 890, 917 |
| PspPI | GGNCC | 2 cut(s) | 100, 1248 |
| PspPPI | RGGWCCY | 2 cut(s) | 100, 1248 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 977, 1009 |
| PstI | CTGCAG | 1 cut(s) | 1152 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1147 |
| PsuI | RGATCY | 2 cut(s) | 613, 1256 |
| RsaI | GTAC | 4 cut(s) | 980, 986, 1108, 1190 |
| RsaNI | GTAC | 4 cut(s) | 979, 985, 1107, 1189 |
| RseI | CAYNNNNRTG | 1 cut(s) | 116 |
| SapI | GCTCTTC | 1 cut(s) | 595 |
| SaqAI | TTAA | 1 cut(s) | 636 |
| SatI | GCNGC | 7 cut(s) | 168, 312, 362, 883, 929, 1135, 1201 |
| Sau3AI | GATC | 3 cut(s) | 496, 613, 1256 |
| Sau96I | GGNCC | 2 cut(s) | 100, 1248 |
| SchI | GAGTC | 2 cut(s) | 566, 904 |
| ScrFI | CCNGG | 1 cut(s) | 1001 |
| SduI | GDGCHC | 2 cut(s) | 350, 1122 |
| SfaNI | GCATC | 2 cut(s) | 12, 330 |
| SfcI | CTRYAG | 2 cut(s) | 1148, 1240 |
| SfoI | GGCGCC | 1 cut(s) | 890 |
| Sfr274I | CTCGAG | 1 cut(s) | 1121 |
| SfuI | TTCGAA | 1 cut(s) | 969 |
| SgrAI | CRCCGGYG | 1 cut(s) | 131 |
| SinI | GGWCC | 2 cut(s) | 100, 1248 |
| SlaI | CTCGAG | 1 cut(s) | 1121 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 116 |
| SmlI | CTYRAG | 4 cut(s) | 246, 920, 1121, 1194 |
| SmoI | CTYRAG | 4 cut(s) | 246, 920, 1121, 1194 |
| Sse9I | AATT | 4 cut(s) | 239, 385, 637, 792 |
| SspDI | GGCGCC | 1 cut(s) | 888 |
| SspMI | CTAG | 3 cut(s) | 807, 813, 867 |
| StyD4I | CCNGG | 1 cut(s) | 999 |
| TaaI | ACNGT | 4 cut(s) | 524, 964, 1183, 1241 |
| TaiI | ACGT | 2 cut(s) | 432, 990 |
| TaqI | TCGA | 7 cut(s) | 186, 627, 681, 969, 1122, 1218, 1299 |
| TasI | AATT | 4 cut(s) | 239, 385, 637, 792 |
| TatI | WGTACW | 1 cut(s) | 1188 |
| TauI | GCSGC | 4 cut(s) | 170, 314, 885, 1137 |
| TfiI | GAWTC | 1 cut(s) | 1301 |
| Tru1I | TTAA | 1 cut(s) | 636 |
| Tru9I | TTAA | 1 cut(s) | 636 |
| TscAI | CASTG | 3 cut(s) | 529, 538, 1117 |
| TseFI | GTSAC | 2 cut(s) | 1009, 1036 |
| TseI | GCWGC | 3 cut(s) | 361, 928, 1200 |
| Tsp45I | GTSAC | 2 cut(s) | 1009, 1036 |
| TspDTI | ATGAA | 4 cut(s) | 435, 440, 593, 645 |
| TspGWI | ACGGA | 1 cut(s) | 1204 |
| TspRI | CASTG | 3 cut(s) | 529, 538, 1117 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 78 |
| VpaK11BI | GGWCC | 2 cut(s) | 100, 1248 |
| XapI | RAATTY | 2 cut(s) | 239, 792 |
| XhoI | CTCGAG | 1 cut(s) | 1121 |
| XspI | CTAG | 3 cut(s) | 807, 813, 867 |