Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005417

Physical Location & Seq

Genomic Coordinates Reverse (-)

80155689 .. 80157399

Gene Structure 1711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG571000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 915 bp

ATGGAGAAAACAGAGAAAGAGAGCTTGATGTCACTGCATCAGGAGAGCAGCAGCAAGTCGCCGGAGGAAACTCAGGCCACCTTCACCGCCATGTTCCCCGTCAACCTCCATTCCATTCTCGCCGCCAACACCACCCAGCCCTTACTCCCTCTCTCCTTGTTCGCCGATAACTACTGCAGCCTCTCCGCTCCCGAAACCGAACCGCCGCTCTTTCACAACCACTACCACCAGGGCCAGCCACCACAATACGGCGCCGTTTCGGCTCAGACGTCGTCCCTCATCGACTACTACTCCATATTCAACCACCTCCCGGACCTCCTCTCCCTGGACCACTCTCCCTACAAGCGCCCTCGCCTCCTCGACCACCAAACCCTAGCCTCCTCCTACCAGCTCTACCCGACGCCGGCCGAATCTCCGCCGGCTCCCGTGGTGGTGCCACGTGGAAGCGGCCTGGCCCGGAAGAGGCGGCAGACGCTGAGCGACAAGATGCGGTGCCTGCAGAAGCTGCTGCCGTGGGAGAAGAAGATGGACAACGCCACCACGCTCGAGGCGGCGCACCGCTACGTCCGGTTCCTCCAGGCTCAGGTCGCCGCCCTCCAGGCCATGCCCATCGTCGCCTCCGACTCGGCCGGCTCCCTCCCCGTCCTGACAGGCGGCGTCGGCGGCGGCACCGGTGAGGTGGAGGTGCTGTCCAGGCTGAGCCGGAGCCAGATGCTGCAGGTGGCGGTGAACTCGCCGGTGGCGCAGATGAGGATGTCGGATCTCGGGAGGTGTGTGTTCTCGGTGGAGCAGCTGGCTCTGCTGAACAAGAAGAGCGTCATCAGGTCTGCCATGGTCTCTGCTTCAGGCCATTACTGTCCTACTACTACTACTAGCTTCATTGACTCTTCTGCTTCTGCCTCTACCACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

304

Amino Acids

33.12

Weight (kDa)

7.75

Isoelectric Point (pI)

62.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	153 - 193	6.9e-06	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22100
fragaria_vesca	FvH4_1g29760 FvH4_6g43750
malus_domestica	MD17G1091100.v1.1
prunus_persica	Prupe.3G222500_v2.0.a1
pyrus_communis	pycom17g08800
rosa_chinensis	RchiOBHm_Chr2g0160481
rosa_laevigata	RLG00000000602 RLG00000006966 RLG00000012534 RLG00000020740 RLG00000021217 RLG00000035791
rosa_multiflora	Rmu_sc0002771.1_g000001 Rmu_ssc0000110.1_g000012
rosa_roxburghii	Rroxscaffold_2G00089790
rosa_rugosa	Rorug02G0234500 Rorug02G0483400 Rorug04G0068000
rosa_samantha	Rh2AG291900 Rh2AG548600 Rh2BG222400 Rh2BG562200 Rh2CG532900 Rh2DG571000 Rh7CG232200 Rh7CG308300 Rh7DG351600
rosa_wichuraiana	Rw2G045420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	709
AatII	GACGTC	1 cut(s)	272
Acc36I	ACCTGC	1 cut(s)	709
AccB1I	GGYRCC	4 cut(s)	251, 433, 492, 668
AccBSI	CCGCTC	2 cut(s)	188, 208
AclWI	GGATC	1 cut(s)	768
AcoI	YGGCCR	2 cut(s)	405, 627
AcuI	CTGAAG	1 cut(s)	828
AcvI	CACGTG	1 cut(s)	440
AcyI	GRCGYC	4 cut(s)	252, 269, 401, 657
AfiI	CCNNNNNNNGG	6 cut(s)	248, 310, 325, 403, 462, 583
AgeI	ACCGGT	1 cut(s)	671
AgsI	TTSAA	1 cut(s)	301
AjnI	CCWGG	6 cut(s)	228, 324, 450, 576, 597, 692
AluBI	AGCT	5 cut(s)	24, 391, 505, 793, 876
AluI	AGCT	5 cut(s)	24, 391, 505, 793, 876
Alw26I	GTCTC	1 cut(s)	841
AlwI	GGATC	1 cut(s)	768
AlwNI	CAGNNNCTG	3 cut(s)	475, 505, 715
Ama87I	CYCGRG	2 cut(s)	545, 764
AoxI	GGCC	8 cut(s)	75, 232, 405, 448, 453, 600, 627, 847
ApeKI	GCWGC	7 cut(s)	48, 51, 177, 505, 508, 715, 790
AsiGI	ACCGGT	1 cut(s)	671
AspLEI	GCGC	4 cut(s)	254, 348, 556, 745
AspS9I	GGNCC	4 cut(s)	232, 313, 328, 454
AsuC2I	CCSGG	2 cut(s)	311, 457
AsuHPI	GGTGA	3 cut(s)	76, 686, 739
AvaI	CYCGRG	2 cut(s)	545, 764
AvaII	GGWCC	2 cut(s)	313, 328
BanI	GGYRCC	4 cut(s)	251, 433, 492, 668
BbrPI	CACGTG	1 cut(s)	440
BbvI	GCAGC	7 cut(s)	60, 63, 189, 492, 495, 702, 802
BccI	CCATC	2 cut(s)	520, 617
BceAI	ACGGC	3 cut(s)	239, 265, 496
BciT130I	CCWGG	6 cut(s)	230, 326, 452, 578, 599, 694
BcnI	CCSGG	2 cut(s)	311, 457
BcoDI	GTCTC	1 cut(s)	841
BfaI	CTAG	2 cut(s)	374, 873
BfmI	CTRYAG	3 cut(s)	175, 497, 716
BfoI	RGCGCY	2 cut(s)	255, 349
BfuAI	ACCTGC	1 cut(s)	709
BglI	GCCNNNNNGGC	2 cut(s)	260, 599
BlpI	GCTNAGC	2 cut(s)	476, 698
Bme1390I	CCNGG	8 cut(s)	230, 311, 326, 452, 457, 578, 599, 694
Bme18I	GGWCC	2 cut(s)	313, 328
BmeT110I	CYCGRG	2 cut(s)	545, 764
BmgT120I	GGNCC	4 cut(s)	232, 313, 328, 454
BmiI	GGNNCC	8 cut(s)	253, 423, 435, 494, 572, 634, 670, 707
BmrFI	CCNGG	8 cut(s)	230, 311, 326, 452, 457, 578, 599, 694
BmsI	GCATC	3 cut(s)	46, 477, 702
BpmI	CTGGAG	2 cut(s)	560, 581
Bpu10I	CCTNAGC	1 cut(s)	582
Bpu1102I	GCTNAGC	2 cut(s)	476, 698
BpuMI	CCSGG	2 cut(s)	311, 457
BsaAI	YACGTR	1 cut(s)	440
BsaHI	GRCGYC	4 cut(s)	252, 269, 401, 657
BsaI	GGTCTC	1 cut(s)	841
BsaJI	CCNNGG	5 cut(s)	229, 324, 426, 512, 831
BsaWI	WCCGGW	2 cut(s)	567, 671
BsaXI	ACNNNNNCTCC	6 cut(s)	275, 305, 305, 335, 674, 704
Bsc4I	CCNNNNNNNGG	6 cut(s)	248, 310, 325, 403, 462, 583
Bse118I	RCCGGY	5 cut(s)	403, 418, 629, 671, 736
BseBI	CCWGG	6 cut(s)	230, 326, 452, 578, 599, 694
BseDI	CCNNGG	5 cut(s)	229, 324, 426, 512, 831
BseGI	GGATG	1 cut(s)	759
BseLI	CCNNNNNNNGG	6 cut(s)	248, 310, 325, 403, 462, 583
BseMII	CTCAG	5 cut(s)	86, 278, 467, 596, 689
BseRI	GAGGAG	3 cut(s)	308, 347, 370
BseX3I	CGGCCG	2 cut(s)	405, 627
BseXI	GCAGC	7 cut(s)	60, 63, 189, 492, 495, 702, 802
BseYI	CCCAGC	1 cut(s)	135
Bsh1285I	CGRYCG	2 cut(s)	408, 630
BshFI	GGCC	8 cut(s)	77, 234, 407, 450, 455, 602, 629, 849
BshNI	GGYRCC	4 cut(s)	251, 433, 492, 668
BshTI	ACCGGT	1 cut(s)	671
BsiEI	CGRYCG	2 cut(s)	408, 630
BsiHKCI	CYCGRG	2 cut(s)	545, 764
BslFI	GGGAC	1 cut(s)	259
BslI	CCNNNNNNNGG	6 cut(s)	248, 310, 325, 403, 462, 583
BsmAI	GTCTC	1 cut(s)	841
BsmFI	GGGAC	1 cut(s)	259
BsnI	GGCC	8 cut(s)	77, 234, 407, 450, 455, 602, 629, 849
Bso31I	GGTCTC	1 cut(s)	841
BsoBI	CYCGRG	2 cut(s)	545, 764
Bsp143I	GATC	1 cut(s)	760
Bsp1720I	GCTNAGC	2 cut(s)	476, 698
Bsp19I	CCATGG	1 cut(s)	831
BspANI	GGCC	8 cut(s)	77, 234, 407, 450, 455, 602, 629, 849
BspCNI	CTCAG	5 cut(s)	85, 277, 468, 595, 690
BspLI	GGNNCC	8 cut(s)	253, 423, 435, 494, 572, 634, 670, 707
BspMAI	CTGCAG	3 cut(s)	179, 501, 720
BspMI	ACCTGC	1 cut(s)	709
BspPI	GGATC	1 cut(s)	768
BspQI	GCTCTTC	1 cut(s)	806
BspT107I	GGYRCC	4 cut(s)	251, 433, 492, 668
BspTNI	GGTCTC	1 cut(s)	841
BsrBI	CCGCTC	2 cut(s)	188, 208
BsrFI	RCCGGY	5 cut(s)	403, 418, 629, 671, 736
BssAI	RCCGGY	5 cut(s)	403, 418, 629, 671, 736
BssECI	CCNNGG	5 cut(s)	229, 324, 426, 512, 831
BssMI	GATC	1 cut(s)	760
BssNI	GRCGYC	4 cut(s)	252, 269, 401, 657
BssT1I	CCWWGG	1 cut(s)	831
Bst2UI	CCWGG	6 cut(s)	230, 326, 452, 578, 599, 694
Bst4CI	ACNGT	1 cut(s)	857
Bst6I	CTCTTC	3 cut(s)	455, 806, 892
BstACI	GRCGYC	4 cut(s)	252, 269, 401, 657
BstAPI	GCANNNNNTGC	1 cut(s)	505
BstBAI	YACGTR	1 cut(s)	440
BstC8I	GCNNGC	6 cut(s)	236, 405, 420, 497, 631, 795
BstDEI	CTNAG	5 cut(s)	72, 264, 476, 582, 698
BstDSI	CCRYGG	3 cut(s)	426, 512, 831
BstF5I	GGATG	1 cut(s)	759
BstH2I	RGCGCY	2 cut(s)	255, 349
BstHHI	GCGC	4 cut(s)	254, 348, 556, 745
BstKTI	GATC	1 cut(s)	763
BstMAI	GTCTC	1 cut(s)	841
BstMBI	GATC	1 cut(s)	760
BstMCI	CGRYCG	2 cut(s)	408, 630
BstNI	CCWGG	6 cut(s)	230, 326, 452, 578, 599, 694
BstSCI	CCNGG	8 cut(s)	228, 309, 324, 450, 455, 576, 597, 692
BstSFI	CTRYAG	3 cut(s)	175, 497, 716
BstV1I	GCAGC	7 cut(s)	60, 63, 189, 492, 495, 702, 802
BstX2I	RGATCY	1 cut(s)	760
BstYI	RGATCY	1 cut(s)	760
BstZI	CGGCCG	2 cut(s)	405, 627
BsuRI	GGCC	8 cut(s)	77, 234, 407, 450, 455, 602, 629, 849
BtgI	CCRYGG	3 cut(s)	426, 512, 831
BtsCI	GGATG	1 cut(s)	759
BtsI	GCAGTG	1 cut(s)	32
BtsIMutI	CAGTG	1 cut(s)	32
BveI	ACCTGC	1 cut(s)	709
Cac8I	GCNNGC	6 cut(s)	236, 405, 420, 497, 631, 795
CaiI	CAGNNNCTG	3 cut(s)	475, 505, 715
CfoI	GCGC	4 cut(s)	254, 348, 556, 745
Cfr10I	RCCGGY	5 cut(s)	403, 418, 629, 671, 736
Cfr13I	GGNCC	4 cut(s)	232, 313, 328, 454
CseI	GACGC	4 cut(s)	409, 481, 646, 805
CspAI	ACCGGT	1 cut(s)	671
CviAII	CATG	3 cut(s)	91, 604, 832
DdeI	CTNAG	5 cut(s)	72, 264, 476, 582, 698
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	1 cut(s)	762
DpnII	GATC	1 cut(s)	760
EaeI	YGGCCR	2 cut(s)	405, 627
EagI	CGGCCG	2 cut(s)	405, 627
Eam1104I	CTCTTC	3 cut(s)	455, 806, 892
EarI	CTCTTC	3 cut(s)	455, 806, 892
EciI	GGCGGA	1 cut(s)	405
EclXI	CGGCCG	2 cut(s)	405, 627
Eco130I	CCWWGG	1 cut(s)	831
Eco31I	GGTCTC	1 cut(s)	841
Eco47I	GGWCC	2 cut(s)	313, 328
Eco52I	CGGCCG	2 cut(s)	405, 627
Eco57I	CTGAAG	1 cut(s)	828
Eco72I	CACGTG	1 cut(s)	440
Eco88I	CYCGRG	2 cut(s)	545, 764
EcoRII	CCWGG	6 cut(s)	228, 324, 450, 576, 597, 692
EcoT14I	CCWWGG	1 cut(s)	831
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	831
FaeI	CATG	3 cut(s)	94, 607, 835
FaiI	YATR	4 cut(s)	92, 296, 605, 833
FaqI	GGGAC	1 cut(s)	259
FatI	CATG	3 cut(s)	90, 603, 831
FokI	GGATG	1 cut(s)	766
FspBI	CTAG	2 cut(s)	374, 873
GlaI	GCGC	4 cut(s)	253, 347, 555, 744
GsaI	CCCAGC	1 cut(s)	139
GsuI	CTGGAG	2 cut(s)	560, 581
HaeII	RGCGCY	2 cut(s)	255, 349
HaeIII	GGCC	8 cut(s)	77, 234, 407, 450, 455, 602, 629, 849
HgaI	GACGC	4 cut(s)	409, 481, 646, 805
HhaI	GCGC	4 cut(s)	254, 348, 556, 745
Hin1I	GRCGYC	4 cut(s)	252, 269, 401, 657
Hin1II	CATG	3 cut(s)	94, 607, 835
Hin6I	GCGC	4 cut(s)	252, 346, 554, 743
HinP1I	GCGC	4 cut(s)	252, 346, 554, 743
HincII	GTYRAC	1 cut(s)	103
HindII	GTYRAC	1 cut(s)	103
HinfI	GANTC	3 cut(s)	410, 623, 884
HphI	GGTGA	3 cut(s)	76, 686, 739
Hpy166II	GTNNAC	2 cut(s)	103, 730
Hpy188I	TCNGA	3 cut(s)	267, 622, 760
Hpy188III	TCNNGA	4 cut(s)	41, 191, 646, 766
Hpy8I	GTNNAC	2 cut(s)	103, 730
Hpy99I	CGWCG	4 cut(s)	274, 403, 617, 662
HpyAV	CCTTC	1 cut(s)	91
HpyCH4III	ACNGT	1 cut(s)	857
HpyCH4IV	ACGT	3 cut(s)	269, 439, 564
HpyCH4V	TGCA	4 cut(s)	37, 177, 499, 718
HpyF3I	CTNAG	5 cut(s)	72, 264, 476, 582, 698
HpySE526I	ACGT	3 cut(s)	269, 439, 564
Hsp92I	GRCGYC	4 cut(s)	252, 269, 401, 657
Hsp92II	CATG	3 cut(s)	94, 607, 835
HspAI	GCGC	4 cut(s)	252, 346, 554, 743
KasI	GGCGCC	1 cut(s)	251
KroI	GCCGGC	3 cut(s)	403, 418, 629
KroNI	GCCGGC	3 cut(s)	405, 420, 631
Kzo9I	GATC	1 cut(s)	760
LguI	GCTCTTC	1 cut(s)	806
LmnI	GCTCC	5 cut(s)	193, 427, 638, 705, 787
Lsp1109I	GCAGC	7 cut(s)	60, 63, 189, 492, 495, 702, 802
LweI	GCATC	3 cut(s)	46, 477, 702
MaeI	CTAG	2 cut(s)	374, 873
MaeII	ACGT	3 cut(s)	269, 439, 564
MaeIII	GTNAC	1 cut(s)	30
MalI	GATC	1 cut(s)	762
MbiI	CCGCTC	2 cut(s)	188, 208
MboI	GATC	1 cut(s)	760
MboII	GAAGA	5 cut(s)	472, 532, 535, 823, 879
MflI	RGATCY	1 cut(s)	760
MluCI	AATT	1 cut(s)	910
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	2 cut(s)	617, 878
MmeI	TCCRAC	2 cut(s)	645, 738
MroNI	GCCGGC	3 cut(s)	403, 418, 629
MseI	TTAA	1 cut(s)	913
MslI	CAYNNNNRTG	1 cut(s)	89
MspA1I	CMGCKG	1 cut(s)	793
MspR9I	CCNGG	8 cut(s)	230, 311, 326, 452, 457, 578, 599, 694
MvaI	CCWGG	6 cut(s)	230, 326, 452, 578, 599, 694
NaeI	GCCGGC	3 cut(s)	405, 420, 631
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	311, 457
NcoI	CCATGG	1 cut(s)	831
NdeII	GATC	1 cut(s)	760
NgoMIV	GCCGGC	3 cut(s)	403, 418, 629
NlaIII	CATG	3 cut(s)	94, 607, 835
NlaIV	GGNNCC	8 cut(s)	253, 423, 435, 494, 572, 634, 670, 707
NmeAIII	GCCGAG	1 cut(s)	605
NmuCI	GTSAC	1 cut(s)	30
PaeR7I	CTCGAG	1 cut(s)	545
PaqCI	CACCTGC	1 cut(s)	709
PciSI	GCTCTTC	1 cut(s)	806
PcsI	WCGNNNNNNNCGW	2 cut(s)	266, 618
PdiI	GCCGGC	3 cut(s)	405, 420, 631
PfeI	GAWTC	1 cut(s)	410
PflFI	GACNNNGTC	1 cut(s)	271
PfoI	TCCNGGA	1 cut(s)	309
PinAI	ACCGGT	1 cut(s)	671
PleI	GAGTC	2 cut(s)	617, 878
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	1 cut(s)	440
PmlI	CACGTG	1 cut(s)	440
PpsI	GAGTC	2 cut(s)	617, 878
Ppu21I	YACGTR	1 cut(s)	440
Psp6I	CCWGG	6 cut(s)	228, 324, 450, 576, 597, 692
PspCI	CACGTG	1 cut(s)	440
PspFI	CCCAGC	1 cut(s)	135
PspGI	CCWGG	6 cut(s)	228, 324, 450, 576, 597, 692
PspN4I	GGNNCC	8 cut(s)	253, 423, 435, 494, 572, 634, 670, 707
PspPI	GGNCC	4 cut(s)	232, 313, 328, 454
PspXI	VCTCGAGB	1 cut(s)	545
PstI	CTGCAG	3 cut(s)	179, 501, 720
PstNI	CAGNNNCTG	3 cut(s)	475, 505, 715
PsuI	RGATCY	1 cut(s)	760
PsyI	GACNNNGTC	1 cut(s)	271
PvuII	CAGCTG	1 cut(s)	793
RseI	CAYNNNNRTG	1 cut(s)	89
SapI	GCTCTTC	1 cut(s)	806
SaqAI	TTAA	1 cut(s)	913
Sau3AI	GATC	1 cut(s)	760
Sau96I	GGNCC	4 cut(s)	232, 313, 328, 454
SchI	GAGTC	2 cut(s)	617, 878
ScrFI	CCNGG	8 cut(s)	230, 311, 326, 452, 457, 578, 599, 694
SfaNI	GCATC	3 cut(s)	46, 477, 702
SfcI	CTRYAG	3 cut(s)	175, 497, 716
SfoI	GGCGCC	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	545
SgrAI	CRCCGGYG	2 cut(s)	671, 736
SinI	GGWCC	2 cut(s)	313, 328
SlaI	CTCGAG	1 cut(s)	545
SmiMI	CAYNNNNRTG	1 cut(s)	89
SmlI	CTYRAG	1 cut(s)	545
SmoI	CTYRAG	1 cut(s)	545
Sse9I	AATT	1 cut(s)	910
SspDI	GGCGCC	1 cut(s)	251
SspMI	CTAG	2 cut(s)	374, 873
StyD4I	CCNGG	8 cut(s)	228, 309, 324, 450, 455, 576, 597, 692
StyI	CCWWGG	1 cut(s)	831
TaaI	ACNGT	1 cut(s)	857
TaiI	ACGT	3 cut(s)	272, 442, 567
TaqI	TCGA	3 cut(s)	282, 360, 546
TasI	AATT	1 cut(s)	910
TauI	GCSGC	9 cut(s)	125, 208, 450, 469, 554, 593, 657, 666, 669
TfiI	GAWTC	1 cut(s)	410
Tru1I	TTAA	1 cut(s)	913
Tru9I	TTAA	1 cut(s)	913
TscAI	CASTG	1 cut(s)	39
TseFI	GTSAC	1 cut(s)	30
TseI	GCWGC	7 cut(s)	48, 51, 177, 505, 508, 715, 790
Tsp45I	GTSAC	1 cut(s)	30
TspDTI	ATGAA	1 cut(s)	868
TspRI	CASTG	1 cut(s)	39
Tth111I	GACNNNGTC	1 cut(s)	271
VpaK11BI	GGWCC	2 cut(s)	313, 328
XhoI	CTCGAG	1 cut(s)	545
XspI	CTAG	2 cut(s)	374, 873
ZraI	GACGTC	1 cut(s)	270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.