Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0001724

Physical Location & Seq

Genomic Coordinates Forward (+)

547380 .. 552569

Gene Structure 5190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G011300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGTCGGCCGATTTGACGCTGAGATCGTCGTGCAGCGGATGTGGATCGACGTCGGAATTATACGGAAGCAATTGCAAGCACATGACTCTGTGCCTGTCCTGTGGCAAAACCATGGCTGAGAACCGCGCCAAATGCTTTGACTGTGGCGCCATCGTCACTCGCTTAATTCGAGAGTATAATGTTCGTGCGAGTACTGTAAACGACAAGAACTACTTCATTGGTAGATTTGTGACTGGGTTGCCAAGTTTTTCGAAGAAGAAAAATGCTGAAAATAAGTGGTCTCTTCACAAGGAAGGACTACAAGGACGCCAACTTTCTGATACCTTGCGGGATAAGTACAAGAACAAACCTTGGGTCTTGGAGGATGAAACTGGCCAGTCTCAGTACCAGGGTCATCTTGAAGGTGCACAAACTGCAACATACTACCTACTAATGAGGCAAGGAAAGGAGTTTTCAGCTATTCCTGCTGGTTCTTGGTTCAACTTCAACAAGGTTGCACAATACAAGCAACTTACATTGGAGGAAGCTGAAGAGAAGATTAAAAATAGGAAAAAGACCGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAATAATGGAGCTGCTGCATTTGGTGAGGTGGAGAGGTTTGACAAGGATAATAGTGTGACGAGTGGGAAGGGACGGAAAAAAGCTGGTGATGATGATGATGGTGAAGGAAATGTCTCAGATAAAGGTGAGGAGGATGAGGAAGAAGAGTTAGCCCGGAAAAATAGACTGAACAAAAAAGGTGGTGATGATGATGATGATGATGGTGCAAGGGGAGCTGATGCTGACTTGGACGATGATGATGTCGAGAAGGGAGATGATTGGGAGCATGAAGAAATTTTCACTGATGATGATGAAGCTGTTGGCAATAATCCTGAGGAAAGGGAAGATTTGGAACTTGAGGTTCCAGCTCCTCCAGAAATTAAGCAGGATGATGAGGATGAGGATGAAGATGACAAGGAGGGCGGACTGAGCAAATCTGGAAAAGAGTTGAAGAAGTTACTTGGGCGAACTGGTGGGCTGGATGATTCAGATGCAGAAGATGACGACGATGACGATGATGATATGGATGATGATATTGGCTTTCCTCAAGCAGCGGCACCAAAGCAAAAGGATGCATCCAAAGAGGAACCATCTGACAACAGTCCCTCAAAACCAGTGCCTTCTGGGTCTGCTCGAGGAACTCCATCTACCGCCAAGTCCGCAAAGGGAAAGAGAAAATTAAGTGCTGATGATGCTAAGACATCTAACAGTGCACCTCCCAAGAAGGTGAAAAGTGAAAATGAACAAAAAGTTTCCACCAAAGAGGAGCCTGCATCTGCTTCTAAAAGTAGTACACCTTCAAAAGGTACTCCATCGGTAAAAGTGGAGCCAACATCATCAAGTGGACCCGTCACTGAGGAAGAAATCAGGACTGTTTTGGTGCAAAGAACACCAGTCACCACACAAGATCTTGTTGCTAGATTTAAGGCAAGACTCAGATTGCAAGAGGACAAGACAGCTTTTGCTGCGATCCTGAGGAAAATTTCTAAGATACAGAAGACCACCAACGGATCCAGCTATGTTGTGCTGAGAGATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0008022

KEGG Pathways

Metabolic & Signaling

ko03022 map03022

Pfam Domains

Protein Families

TFIIF_alpha

Protein Analysis

538

Amino Acids

59.03

Weight (kDa)

4.86

Isoelectric Point (pI)

39.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12610 AT4G12610
fragaria_vesca	FvH4_2g22070 FvH4_2g22070 FvH4_2g22070 FvH4_3g01042
malus_domestica	MD05G1357300.v1.1 MD10G1331000.v1.1
prunus_persica	Prupe.4G011300_v2.0.a1 Prupe.4G011300_v2.0.a1
pyrus_communis	pycom05g32330 pycom10g28050
rosa_chinensis	RchiOBHm_Chr5g0001581 RchiOBHm_Chr6g0288941
rosa_laevigata	RLG00000009133 RLG00000012342 RLG00000012344 RLG00000030944
rosa_multiflora	Rmu_sc0003749.1_g000001 Rmu_sc0006320.1_g000007 Rmu_sc0007182.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074740 Rroxscaffold_7G00179460 Rroxscaffold_7G00179470 Rroxscaffold_7G00179490
rosa_rugosa	Rorug04G0391100 Rorug06G0199700 Rorug06G0201700
rosa_samantha	Rh2BG455300 Rh2DG465300 Rh5AG012500 Rh5BG015400 Rh5CG013500 Rh5CG313700 Rh5DG013300 Rh6AG312800 Rh6BG317400 Rh6BG319600 Rh6CG326300 Rh6DG312400
rosa_wichuraiana	Rw0G003180 Rw0G005580 Rw1G016380 Rw2G040560 Rw5G001200 Rw6G027030 Rw7G019510 Rw7G019540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	53
AccB1I	GGYRCC	2 cut(s)	146, 1129
AccII	CGCG	1 cut(s)	126
AciI	CCGC	8 cut(s)	36, 124, 328, 558, 996, 1127, 1224, 1233
AclWI	GGATC	4 cut(s)	52, 1537, 1578, 1591
AcoI	YGGCCR	2 cut(s)	6, 373
AcsI	RAATTY	2 cut(s)	867, 1554
AcuI	CTGAAG	1 cut(s)	549
AcyI	GRCGYC	3 cut(s)	50, 147, 307
AfaI	GTAC	5 cut(s)	193, 338, 386, 1366, 1381
AfiI	CCNNNNNNNGG	1 cut(s)	1376
AgsI	TTSAA	5 cut(s)	401, 481, 487, 1024, 1374
AjnI	CCWGG	1 cut(s)	387
Alw21I	GWGCWC	2 cut(s)	409, 1288
Alw26I	GTCTC	3 cut(s)	285, 384, 712
Alw44I	GTGCAC	2 cut(s)	405, 1284
AlwI	GGATC	4 cut(s)	52, 1537, 1578, 1591
Ama87I	CYCGRG	1 cut(s)	1206
AoxI	GGCC	2 cut(s)	6, 373
ApaLI	GTGCAC	2 cut(s)	405, 1284
ApeKI	GCWGC	6 cut(s)	33, 590, 605, 608, 1124, 1538
ApoI	RAATTY	2 cut(s)	867, 1554
ArsI	GACNNNNNNTTYG	2 cut(s)	339, 371
Asp700I	GAANNNNTTC	1 cut(s)	212
AspLEI	GCGC	2 cut(s)	128, 149
AspS9I	GGNCC	1 cut(s)	1418
AsuC2I	CCSGG	1 cut(s)	748
AsuHPI	GGTGA	7 cut(s)	629, 692, 707, 731, 788, 1312, 1462
AsuII	TTCGAA	1 cut(s)	251
AvaI	CYCGRG	1 cut(s)	1206
AvaII	GGWCC	1 cut(s)	1418
AxyI	CCTNAGG	2 cut(s)	906, 1547
BaeGI	GKGCMC	2 cut(s)	409, 1288
BalI	TGGCCA	1 cut(s)	375
BamHI	GGATCC	1 cut(s)	1583
BanI	GGYRCC	2 cut(s)	146, 1129
BarI	GAAGNNNNNNTAC	2 cut(s)	1354, 1386
BbsI	GAAGAC	1 cut(s)	1577
Bbv12I	GWGCWC	2 cut(s)	409, 1288
BbvI	GCAGC	6 cut(s)	45, 577, 592, 595, 1136, 1525
BccI	CCATC	8 cut(s)	158, 557, 570, 686, 788, 1171, 1225, 1393
BciT130I	CCWGG	1 cut(s)	389
BcnI	CCSGG	1 cut(s)	748
BcoDI	GTCTC	3 cut(s)	285, 384, 712
BfaI	CTAG	1 cut(s)	1491
BfoI	RGCGCY	1 cut(s)	150
BglII	AGATCT	1 cut(s)	1480
BisI	GCNGC	7 cut(s)	34, 591, 606, 609, 1125, 1128, 1539
BlsI	GCNGC	7 cut(s)	35, 592, 607, 610, 1126, 1129, 1540
BmcAI	AGTACT	1 cut(s)	193
Bme1390I	CCNGG	2 cut(s)	389, 748
Bme18I	GGWCC	1 cut(s)	1418
BmeT110I	CYCGRG	1 cut(s)	1206
BmgT120I	GGNCC	1 cut(s)	1418
BmiI	GGNNCC	8 cut(s)	148, 936, 1131, 1161, 1341, 1401, 1420, 1585
BmrFI	CCNGG	2 cut(s)	389, 748
BmrI	ACTGGG	1 cut(s)	243
BmsI	GCATC	6 cut(s)	802, 1054, 1135, 1157, 1255, 1355
BmuI	ACTGGG	1 cut(s)	243
BoxI	GACNNNNGTC	1 cut(s)	1173
BpiI	GAAGAC	1 cut(s)	1577
BpmI	CTGGAG	1 cut(s)	930
Bpu14I	TTCGAA	1 cut(s)	251
BpuEI	CTTGAG	2 cut(s)	950, 1104
BpuMI	CCSGG	1 cut(s)	748
BsaBI	GATNNNNATC	1 cut(s)	43
BsaHI	GRCGYC	3 cut(s)	50, 147, 307
BsaI	GGTCTC	1 cut(s)	285
BsaJI	CCNNGG	3 cut(s)	111, 350, 388
Bsc4I	CCNNNNNNNGG	1 cut(s)	1376
Bse1I	ACTGG	6 cut(s)	238, 376, 376, 1048, 1187, 1466
Bse21I	CCTNAGG	2 cut(s)	906, 1547
Bse8I	GATNNNNATC	1 cut(s)	43
BseBI	CCWGG	1 cut(s)	389
BseDI	CCNNGG	3 cut(s)	111, 350, 388
BseJI	GATNNNNATC	1 cut(s)	43
BseLI	CCNNNNNNNGG	1 cut(s)	1376
BseNI	ACTGG	6 cut(s)	238, 376, 376, 1048, 1187, 1466
BseRI	GAGGAG	3 cut(s)	737, 933, 1352
BseSI	GKGCMC	2 cut(s)	409, 1288
BseX3I	CGGCCG	1 cut(s)	6
BseXI	GCAGC	6 cut(s)	45, 577, 592, 595, 1136, 1525
BsgI	GTGCAG	1 cut(s)	52
Bsh1236I	CGCG	1 cut(s)	126
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	2 cut(s)	8, 375
BshNI	GGYRCC	2 cut(s)	146, 1129
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	409, 1288
BsiHKCI	CYCGRG	1 cut(s)	1206
BsiSI	CCGG	1 cut(s)	748
BslFI	GGGAC	2 cut(s)	678, 1161
BslI	CCNNNNNNNGG	1 cut(s)	1376
BsmAI	GTCTC	3 cut(s)	285, 384, 712
BsmFI	GGGAC	2 cut(s)	678, 1161
BsnI	GGCC	2 cut(s)	8, 375
Bso31I	GGTCTC	1 cut(s)	285
BsoBI	CYCGRG	1 cut(s)	1206
Bsp119I	TTCGAA	1 cut(s)	251
Bsp1286I	GDGCHC	2 cut(s)	409, 1288
Bsp143I	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
Bsp19I	CCATGG	1 cut(s)	111
BspACI	CCGC	8 cut(s)	36, 124, 328, 558, 996, 1127, 1224, 1233
BspANI	GGCC	2 cut(s)	8, 375
BspFNI	CGCG	1 cut(s)	126
BspLI	GGNNCC	8 cut(s)	148, 936, 1131, 1161, 1341, 1401, 1420, 1585
BspPI	GGATC	4 cut(s)	52, 1537, 1578, 1591
BspT104I	TTCGAA	1 cut(s)	251
BspT107I	GGYRCC	2 cut(s)	146, 1129
BspTNI	GGTCTC	1 cut(s)	285
BsrI	ACTGG	6 cut(s)	238, 376, 376, 1048, 1187, 1466
BssECI	CCNNGG	3 cut(s)	111, 350, 388
BssMI	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
BssNI	GRCGYC	3 cut(s)	50, 147, 307
BssT1I	CCWWGG	2 cut(s)	111, 350
Bst2UI	CCWGG	1 cut(s)	389
Bst4CI	ACNGT	5 cut(s)	143, 196, 1175, 1283, 1447
Bst6I	CTCTTC	3 cut(s)	288, 525, 732
BstACI	GRCGYC	3 cut(s)	50, 147, 307
BstAPI	GCANNNNNTGC	1 cut(s)	413
BstBI	TTCGAA	1 cut(s)	251
BstC8I	GCNNGC	2 cut(s)	77, 1344
BstDSI	CCRYGG	1 cut(s)	111
BstENI	CCTNNNNNAGG	1 cut(s)	1374
BstFNI	CGCG	1 cut(s)	126
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	2 cut(s)	128, 149
BstKTI	GATC	5 cut(s)	26, 47, 1483, 1545, 1586
BstMAI	GTCTC	3 cut(s)	285, 384, 712
BstMBI	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	8 cut(s)	132, 413, 464, 806, 1002, 1232, 1265, 1538
BstNI	CCWGG	1 cut(s)	389
BstPAI	GACNNNNGTC	1 cut(s)	1173
BstSCI	CCNGG	2 cut(s)	387, 746
BstSLI	GKGCMC	2 cut(s)	409, 1288
BstUI	CGCG	1 cut(s)	126
BstV1I	GCAGC	6 cut(s)	45, 577, 592, 595, 1136, 1525
BstV2I	GAAGAC	1 cut(s)	1577
BstX2I	RGATCY	2 cut(s)	1480, 1583
BstYI	RGATCY	2 cut(s)	1480, 1583
BstZI	CGGCCG	1 cut(s)	6
Bsu36I	CCTNAGG	2 cut(s)	906, 1547
BsuRI	GGCC	2 cut(s)	8, 375
BtgI	CCRYGG	1 cut(s)	111
BtsIMutI	CAGTG	4 cut(s)	873, 1194, 1288, 1425
Cac8I	GCNNGC	2 cut(s)	77, 1344
CfoI	GCGC	2 cut(s)	128, 149
Cfr13I	GGNCC	1 cut(s)	1418
CseI	GACGC	2 cut(s)	25, 315
Csp6I	GTAC	5 cut(s)	192, 337, 385, 1365, 1380
CspCI	CAANNNNNGTGG	2 cut(s)	754, 789
CviAII	CATG	3 cut(s)	82, 112, 860
CviQI	GTAC	5 cut(s)	192, 337, 385, 1365, 1380
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	5 cut(s)	25, 46, 1482, 1544, 1585
DpnII	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
EaeI	YGGCCR	2 cut(s)	6, 373
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	3 cut(s)	288, 525, 732
EarI	CTCTTC	3 cut(s)	288, 525, 732
EciI	GGCGGA	1 cut(s)	1011
EclXI	CGGCCG	1 cut(s)	6
Eco130I	CCWWGG	2 cut(s)	111, 350
Eco31I	GGTCTC	1 cut(s)	285
Eco47I	GGWCC	1 cut(s)	1418
Eco52I	CGGCCG	1 cut(s)	6
Eco57I	CTGAAG	1 cut(s)	549
Eco81I	CCTNAGG	2 cut(s)	906, 1547
Eco88I	CYCGRG	1 cut(s)	1206
EcoNI	CCTNNNNNAGG	1 cut(s)	1374
EcoRII	CCWGG	1 cut(s)	387
EcoT14I	CCWWGG	2 cut(s)	111, 350
EcoT22I	ATGCAT	1 cut(s)	1150
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	2 cut(s)	111, 350
FaeI	CATG	3 cut(s)	85, 115, 863
FaiI	YATR	9 cut(s)	61, 83, 113, 177, 421, 570, 861, 1097, 1593
FalI	AAGNNNNNCTT	2 cut(s)	197, 229
FaqI	GGGAC	2 cut(s)	678, 1161
FatI	CATG	3 cut(s)	81, 111, 859
FauI	CCCGC	1 cut(s)	321
Fnu4HI	GCNGC	7 cut(s)	34, 591, 606, 609, 1125, 1128, 1539
Fsp4HI	GCNGC	7 cut(s)	34, 591, 606, 609, 1125, 1128, 1539
FspBI	CTAG	1 cut(s)	1491
GlaI	GCGC	2 cut(s)	127, 148
GluI	GCNGC	7 cut(s)	34, 591, 606, 609, 1125, 1128, 1539
GsuI	CTGGAG	1 cut(s)	930
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	2 cut(s)	8, 375
HapII	CCGG	1 cut(s)	748
HgaI	GACGC	2 cut(s)	25, 315
HhaI	GCGC	2 cut(s)	128, 149
Hin1I	GRCGYC	3 cut(s)	50, 147, 307
Hin1II	CATG	3 cut(s)	85, 115, 863
Hin6I	GCGC	2 cut(s)	126, 147
HinP1I	GCGC	2 cut(s)	126, 147
HinfI	GANTC	3 cut(s)	85, 1058, 1506
HpaII	CCGG	1 cut(s)	748
HphI	GGTGA	7 cut(s)	629, 692, 707, 731, 788, 1312, 1462
Hpy166II	GTNNAC	5 cut(s)	199, 407, 1286, 1367, 1418
Hpy188I	TCNGA	6 cut(s)	55, 319, 712, 1063, 1168, 1511
Hpy188III	TCNNGA	8 cut(s)	170, 398, 838, 905, 947, 1011, 1441, 1546
Hpy8I	GTNNAC	5 cut(s)	199, 407, 1286, 1367, 1418
Hpy99I	CGWCG	4 cut(s)	31, 52, 55, 1082
HpyAV	CCTTC	8 cut(s)	287, 395, 655, 692, 835, 1203, 1291, 1380
HpyCH4III	ACNGT	5 cut(s)	143, 196, 1175, 1283, 1447
HpyCH4IV	ACGT	1 cut(s)	50
HpyF10VI	GCNNNNNNNGC	8 cut(s)	132, 413, 464, 806, 1002, 1232, 1265, 1538
HpySE526I	ACGT	1 cut(s)	50
Hsp92I	GRCGYC	3 cut(s)	50, 147, 307
Hsp92II	CATG	3 cut(s)	85, 115, 863
HspAI	GCGC	2 cut(s)	126, 147
KasI	GGCGCC	1 cut(s)	146
Kzo9I	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
LmnI	GCTCC	6 cut(s)	602, 806, 856, 946, 1339, 1399
Lsp1109I	GCAGC	6 cut(s)	45, 577, 592, 595, 1136, 1525
LweI	GCATC	6 cut(s)	802, 1054, 1135, 1157, 1255, 1355
MaeI	CTAG	1 cut(s)	1491
MaeII	ACGT	1 cut(s)	50
MaeIII	GTNAC	6 cut(s)	154, 229, 649, 1029, 1423, 1468
MalI	GATC	5 cut(s)	25, 46, 1482, 1544, 1585
MboI	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
MfeI	CAATTG	1 cut(s)	70
MflI	RGATCY	2 cut(s)	1480, 1583
MhlI	GDGCHC	2 cut(s)	409, 1288
MlsI	TGGCCA	1 cut(s)	375
MluCI	AATT	7 cut(s)	56, 70, 165, 867, 951, 1250, 1554
MluNI	TGGCCA	1 cut(s)	375
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	2 cut(s)	79, 1500
MmeI	TCCRAC	1 cut(s)	33
Mox20I	TGGCCA	1 cut(s)	375
Mph1103I	ATGCAT	1 cut(s)	1150
MroXI	GAANNNNTTC	1 cut(s)	212
MscI	TGGCCA	1 cut(s)	375
MseI	TTAA	5 cut(s)	164, 540, 954, 1253, 1497
Msp20I	TGGCCA	1 cut(s)	375
MspA1I	CMGCKG	2 cut(s)	36, 1127
MspI	CCGG	1 cut(s)	748
MspR9I	CCNGG	2 cut(s)	389, 748
MunI	CAATTG	1 cut(s)	70
MvaI	CCWGG	1 cut(s)	389
MvnI	CGCG	1 cut(s)	126
MwoI	GCNNNNNNNGC	8 cut(s)	132, 413, 464, 806, 1002, 1232, 1265, 1538
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	1 cut(s)	748
NcoI	CCATGG	1 cut(s)	111
NdeII	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
NlaIII	CATG	3 cut(s)	85, 115, 863
NlaIV	GGNNCC	8 cut(s)	148, 936, 1131, 1161, 1341, 1401, 1420, 1585
NmuCI	GTSAC	5 cut(s)	154, 229, 649, 1423, 1468
NsiI	ATGCAT	1 cut(s)	1150
NspV	TTCGAA	1 cut(s)	251
PaeR7I	CTCGAG	1 cut(s)	1206
PcsI	WCGNNNNNNNCGW	3 cut(s)	23, 166, 1083
PdmI	GAANNNNTTC	1 cut(s)	212
PfeI	GAWTC	1 cut(s)	1058
PkrI	GCNGC	7 cut(s)	35, 592, 607, 610, 1126, 1129, 1540
PleI	GAGTC	2 cut(s)	79, 1500
PluTI	GGCGCC	1 cut(s)	150
PpsI	GAGTC	2 cut(s)	79, 1500
PshAI	GACNNNNGTC	1 cut(s)	1173
Psp6I	CCWGG	1 cut(s)	387
PspGI	CCWGG	1 cut(s)	387
PspN4I	GGNNCC	8 cut(s)	148, 936, 1131, 1161, 1341, 1401, 1420, 1585
PspPI	GGNCC	1 cut(s)	1418
PspXI	VCTCGAGB	1 cut(s)	1206
PsrI	GAACNNNNNNTAC	2 cut(s)	1204, 1236
PsuI	RGATCY	2 cut(s)	1480, 1583
RsaI	GTAC	5 cut(s)	193, 338, 386, 1366, 1381
RsaNI	GTAC	5 cut(s)	192, 337, 385, 1365, 1380
SaqAI	TTAA	5 cut(s)	164, 540, 954, 1253, 1497
SatI	GCNGC	7 cut(s)	34, 591, 606, 609, 1125, 1128, 1539
Sau3AI	GATC	5 cut(s)	23, 44, 1480, 1542, 1583
Sau96I	GGNCC	1 cut(s)	1418
ScaI	AGTACT	1 cut(s)	193
SchI	GAGTC	2 cut(s)	79, 1500
ScrFI	CCNGG	2 cut(s)	389, 748
SduI	GDGCHC	2 cut(s)	409, 1288
SfaNI	GCATC	6 cut(s)	802, 1054, 1135, 1157, 1255, 1355
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	1206
SfuI	TTCGAA	1 cut(s)	251
SinI	GGWCC	1 cut(s)	1418
SlaI	CTCGAG	1 cut(s)	1206
SmlI	CTYRAG	3 cut(s)	929, 1119, 1206
SmoI	CTYRAG	3 cut(s)	929, 1119, 1206
Sse9I	AATT	7 cut(s)	56, 70, 165, 867, 951, 1250, 1554
SsiI	CCGC	8 cut(s)	36, 124, 328, 558, 996, 1127, 1224, 1233
SspDI	GGCGCC	1 cut(s)	146
SspMI	CTAG	1 cut(s)	1491
StyD4I	CCNGG	2 cut(s)	387, 746
StyI	CCWWGG	2 cut(s)	111, 350
TaaI	ACNGT	5 cut(s)	143, 196, 1175, 1283, 1447
TaiI	ACGT	1 cut(s)	53
TaqI	TCGA	5 cut(s)	47, 169, 251, 837, 1207
TasI	AATT	7 cut(s)	56, 70, 165, 867, 951, 1250, 1554
TatI	WGTACW	3 cut(s)	191, 336, 1364
TauI	GCSGC	1 cut(s)	1130
TfiI	GAWTC	1 cut(s)	1058
Tru1I	TTAA	5 cut(s)	164, 540, 954, 1253, 1497
Tru9I	TTAA	5 cut(s)	164, 540, 954, 1253, 1497
TscAI	CASTG	4 cut(s)	880, 1194, 1288, 1432
TseFI	GTSAC	5 cut(s)	154, 229, 649, 1423, 1468
TseI	GCWGC	6 cut(s)	33, 590, 605, 608, 1124, 1538
Tsp45I	GTSAC	5 cut(s)	154, 229, 649, 1423, 1468
TspDTI	ATGAA	8 cut(s)	205, 381, 585, 599, 876, 900, 993, 1329
TspGWI	ACGGA	3 cut(s)	78, 682, 1596
TspRI	CASTG	4 cut(s)	880, 1194, 1288, 1432
VneI	GTGCAC	2 cut(s)	405, 1284
VpaK11BI	GGWCC	1 cut(s)	1418
XagI	CCTNNNNNAGG	1 cut(s)	1374
XapI	RAATTY	2 cut(s)	867, 1554
XhoI	CTCGAG	1 cut(s)	1206
XmnI	GAANNNNTTC	1 cut(s)	212
XspI	CTAG	1 cut(s)	1491
ZraI	GACGTC	1 cut(s)	51
ZrmI	AGTACT	1 cut(s)	193
Zsp2I	ATGCAT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.