Transcription initiation factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12610 AT4G12610 |
| fragaria_vesca | FvH4_2g22070 FvH4_2g22070 FvH4_2g22070 FvH4_3g01042 |
| malus_domestica | MD05G1357300.v1.1 MD10G1331000.v1.1 |
| prunus_persica | Prupe.4G011300_v2.0.a1 Prupe.4G011300_v2.0.a1 |
| pyrus_communis | pycom05g32330 pycom10g28050 |
| rosa_chinensis | RchiOBHm_Chr5g0001581 RchiOBHm_Chr6g0288941 |
| rosa_laevigata | RLG00000009133 RLG00000012342 RLG00000012344 RLG00000030944 |
| rosa_multiflora | Rmu_sc0003749.1_g000001 Rmu_sc0006320.1_g000007 Rmu_sc0007182.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074740 Rroxscaffold_7G00179460 Rroxscaffold_7G00179470 Rroxscaffold_7G00179490 |
| rosa_rugosa | Rorug04G0391100 Rorug06G0199700 Rorug06G0201700 |
| rosa_samantha | Rh2BG455300 Rh2DG465300 Rh5AG012500 Rh5BG015400 Rh5CG013500 Rh5CG313700 Rh5DG013300 Rh6AG312800 Rh6BG317400 Rh6BG319600 Rh6CG326300 Rh6DG312400 |
| rosa_wichuraiana | Rw0G003180 Rw0G005580 Rw1G016380 Rw2G040560 Rw5G001200 Rw6G027030 Rw7G019510 Rw7G019540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 198 |
| AgsI | TTSAA | 2 cut(s) | 35, 88 |
| AluBI | AGCT | 3 cut(s) | 31, 73, 297 |
| AluI | AGCT | 3 cut(s) | 31, 73, 297 |
| ApeKI | GCWGC | 1 cut(s) | 114 |
| AseI | ATTAAT | 1 cut(s) | 275 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 92 |
| BbsI | GAAGAC | 1 cut(s) | 252 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BfaI | CTAG | 1 cut(s) | 298 |
| BisI | GCNGC | 1 cut(s) | 115 |
| BlsI | GCNGC | 1 cut(s) | 116 |
| BpiI | GAAGAC | 1 cut(s) | 252 |
| BsaJI | CCNNGG | 1 cut(s) | 109 |
| BseDI | CCNNGG | 1 cut(s) | 109 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| Bsp143I | GATC | 1 cut(s) | 56 |
| BspACI | CCGC | 1 cut(s) | 198 |
| BssECI | CCNNGG | 1 cut(s) | 109 |
| BssMI | GATC | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 1 cut(s) | 109 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 164 |
| BstKTI | GATC | 1 cut(s) | 59 |
| BstMBI | GATC | 1 cut(s) | 56 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 114 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BstV2I | GAAGAC | 1 cut(s) | 252 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 212 |
| BtsIMutI | CAGTG | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 142 |
| CviJI | RGCY | 5 cut(s) | 31, 73, 108, 114, 297 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 73, 108, 114, 297 |
| DpnI | GATC | 1 cut(s) | 58 |
| DpnII | GATC | 1 cut(s) | 56 |
| Eco130I | CCWWGG | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 1 cut(s) | 109 |
| ErhI | CCWWGG | 1 cut(s) | 109 |
| FaeI | CATG | 1 cut(s) | 145 |
| FaiI | YATR | 3 cut(s) | 53, 143, 260 |
| FatI | CATG | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 1 cut(s) | 115 |
| Fsp4HI | GCNGC | 1 cut(s) | 115 |
| FspBI | CTAG | 1 cut(s) | 298 |
| GluI | GCNGC | 1 cut(s) | 115 |
| Hin1II | CATG | 1 cut(s) | 145 |
| HindIII | AAGCTT | 1 cut(s) | 29 |
| HinfI | GANTC | 1 cut(s) | 35 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| Hpy188III | TCNNGA | 1 cut(s) | 97 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 164 |
| HpyCH4V | TGCA | 2 cut(s) | 13, 68 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 114 |
| Hsp92II | CATG | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 56 |
| LpnPI | CCDG | 1 cut(s) | 110 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| MaeI | CTAG | 1 cut(s) | 298 |
| MalI | GATC | 1 cut(s) | 58 |
| MboI | GATC | 1 cut(s) | 56 |
| MboII | GAAGA | 5 cut(s) | 37, 100, 179, 182, 257 |
| MluCI | AATT | 2 cut(s) | 220, 276 |
| MnlI | CCTC | 2 cut(s) | 226, 235 |
| MroXI | GAANNNNTTC | 1 cut(s) | 92 |
| MseI | TTAA | 1 cut(s) | 275 |
| MslI | CAYNNNNRTG | 1 cut(s) | 140 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 114 |
| NdeII | GATC | 1 cut(s) | 56 |
| NlaIII | CATG | 1 cut(s) | 145 |
| PdmI | GAANNNNTTC | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PkrI | GCNGC | 1 cut(s) | 116 |
| PshBI | ATTAAT | 1 cut(s) | 275 |
| RseI | CAYNNNNRTG | 1 cut(s) | 140 |
| SaqAI | TTAA | 1 cut(s) | 275 |
| SatI | GCNGC | 1 cut(s) | 115 |
| Sau3AI | GATC | 1 cut(s) | 56 |
| SetI | ASST | 3 cut(s) | 33, 75, 299 |
| SgeI | CNNG | 6 cut(s) | 26, 44, 109, 122, 154, 262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 140 |
| Sse9I | AATT | 2 cut(s) | 220, 276 |
| SsiI | CCGC | 1 cut(s) | 198 |
| SspMI | CTAG | 1 cut(s) | 298 |
| StyI | CCWWGG | 1 cut(s) | 109 |
| TaaI | ACNGT | 2 cut(s) | 43, 164 |
| TasI | AATT | 2 cut(s) | 220, 276 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| Tru1I | TTAA | 1 cut(s) | 275 |
| Tru9I | TTAA | 1 cut(s) | 275 |
| TscAI | CASTG | 1 cut(s) | 169 |
| TseI | GCWGC | 1 cut(s) | 114 |
| TspDTI | ATGAA | 5 cut(s) | 17, 116, 158, 207, 247 |
| TspRI | CASTG | 1 cut(s) | 169 |
| VspI | ATTAAT | 1 cut(s) | 275 |
| XmnI | GAANNNNTTC | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 298 |