Transcription initiation factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12610 AT4G12610 |
| fragaria_vesca | FvH4_2g22070 FvH4_2g22070 FvH4_2g22070 FvH4_3g01042 |
| malus_domestica | MD05G1357300.v1.1 MD10G1331000.v1.1 |
| prunus_persica | Prupe.4G011300_v2.0.a1 Prupe.4G011300_v2.0.a1 |
| pyrus_communis | pycom05g32330 pycom10g28050 |
| rosa_chinensis | RchiOBHm_Chr5g0001581 RchiOBHm_Chr6g0288941 |
| rosa_laevigata | RLG00000009133 RLG00000012342 RLG00000012344 RLG00000030944 |
| rosa_multiflora | Rmu_sc0003749.1_g000001 Rmu_sc0006320.1_g000007 Rmu_sc0007182.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074740 Rroxscaffold_7G00179460 Rroxscaffold_7G00179470 Rroxscaffold_7G00179490 |
| rosa_rugosa | Rorug04G0391100 Rorug06G0199700 Rorug06G0201700 |
| rosa_samantha | Rh2BG455300 Rh2DG465300 Rh5AG012500 Rh5BG015400 Rh5CG013500 Rh5CG313700 Rh5DG013300 Rh6AG312800 Rh6BG317400 Rh6BG319600 Rh6CG326300 Rh6DG312400 |
| rosa_wichuraiana | Rw0G003180 Rw0G005580 Rw1G016380 Rw2G040560 Rw5G001200 Rw6G027030 Rw7G019510 Rw7G019540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 95 |
| AcsI | RAATTY | 1 cut(s) | 155 |
| AcuI | CTGAAG | 1 cut(s) | 94 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 209 |
| AluBI | AGCT | 3 cut(s) | 17, 66, 108 |
| AluI | AGCT | 3 cut(s) | 17, 66, 108 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| AoxI | GGCC | 2 cut(s) | 23, 204 |
| ApoI | RAATTY | 1 cut(s) | 155 |
| BaeGI | GKGCMC | 1 cut(s) | 77 |
| BanI | GGYRCC | 1 cut(s) | 95 |
| BclI | TGATCA | 1 cut(s) | 211 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BfmI | CTRYAG | 1 cut(s) | 221 |
| BmiI | GGNNCC | 1 cut(s) | 97 |
| BoxI | GACNNNNGTC | 1 cut(s) | 56 |
| BpmI | CTGGAG | 1 cut(s) | 75 |
| BsaBI | GATNNNNATC | 1 cut(s) | 216 |
| Bse1I | ACTGG | 1 cut(s) | 58 |
| Bse8I | GATNNNNATC | 1 cut(s) | 216 |
| BseJI | GATNNNNATC | 1 cut(s) | 216 |
| BseNI | ACTGG | 1 cut(s) | 58 |
| BseSI | GKGCMC | 1 cut(s) | 77 |
| BshFI | GGCC | 2 cut(s) | 25, 206 |
| BshNI | GGYRCC | 1 cut(s) | 95 |
| BslFI | GGGAC | 1 cut(s) | 112 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| BsmFI | GGGAC | 1 cut(s) | 112 |
| BsnI | GGCC | 2 cut(s) | 25, 206 |
| Bsp1286I | GDGCHC | 1 cut(s) | 77 |
| Bsp143I | GATC | 1 cut(s) | 211 |
| BspANI | GGCC | 2 cut(s) | 25, 206 |
| BspLI | GGNNCC | 1 cut(s) | 97 |
| BspT107I | GGYRCC | 1 cut(s) | 95 |
| BsrI | ACTGG | 1 cut(s) | 58 |
| BssMI | GATC | 1 cut(s) | 211 |
| Bst4CI | ACNGT | 2 cut(s) | 79, 225 |
| BstC8I | GCNNGC | 1 cut(s) | 167 |
| BstKTI | GATC | 1 cut(s) | 214 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 1 cut(s) | 211 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 72, 175 |
| BstNSI | RCATGY | 1 cut(s) | 169 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 56 |
| BstSFI | CTRYAG | 1 cut(s) | 221 |
| BstSLI | GKGCMC | 1 cut(s) | 77 |
| BsuRI | GGCC | 2 cut(s) | 25, 206 |
| BtsIMutI | CAGTG | 1 cut(s) | 75 |
| Cac8I | GCNNGC | 1 cut(s) | 167 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 6 cut(s) | 5, 17, 25, 66, 108, 206 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 17, 25, 66, 108, 206 |
| DpnI | GATC | 1 cut(s) | 213 |
| DpnII | GATC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 94 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 8 cut(s) | 62, 82, 101, 117, 125, 135, 167, 210 |
| FaqI | GGGAC | 1 cut(s) | 112 |
| FatI | CATG | 1 cut(s) | 165 |
| FbaI | TGATCA | 1 cut(s) | 211 |
| GsuI | CTGGAG | 1 cut(s) | 75 |
| HaeIII | GGCC | 2 cut(s) | 25, 206 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HindIII | AAGCTT | 1 cut(s) | 106 |
| HinfI | GANTC | 3 cut(s) | 11, 57, 217 |
| Hpy188I | TCNGA | 2 cut(s) | 113, 216 |
| HpyCH4III | ACNGT | 2 cut(s) | 79, 225 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 72, 175 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| Ksp22I | TGATCA | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 211 |
| LpnPI | CCDG | 3 cut(s) | 39, 155, 205 |
| MaeIII | GTNAC | 1 cut(s) | 187 |
| MalI | GATC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 211 |
| MhlI | GDGCHC | 1 cut(s) | 77 |
| MluCI | AATT | 2 cut(s) | 41, 155 |
| MlyI | GAGTC | 1 cut(s) | 66 |
| MmeI | TCCRAC | 1 cut(s) | 207 |
| MnlI | CCTC | 1 cut(s) | 158 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 72, 175 |
| NdeII | GATC | 1 cut(s) | 211 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NlaIV | GGNNCC | 1 cut(s) | 97 |
| NspI | RCATGY | 1 cut(s) | 169 |
| PaeI | GCATGC | 1 cut(s) | 169 |
| PfeI | GAWTC | 2 cut(s) | 11, 217 |
| PleI | GAGTC | 1 cut(s) | 65 |
| PpsI | GAGTC | 1 cut(s) | 65 |
| PshAI | GACNNNNGTC | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 97 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| Sau3AI | GATC | 1 cut(s) | 211 |
| SchI | GAGTC | 1 cut(s) | 66 |
| SduI | GDGCHC | 1 cut(s) | 77 |
| SetI | ASST | 4 cut(s) | 19, 68, 110, 194 |
| SfcI | CTRYAG | 1 cut(s) | 221 |
| SgeI | CNNG | 7 cut(s) | 33, 66, 98, 178, 182, 204, 209 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| SphI | GCATGC | 1 cut(s) | 169 |
| Sse9I | AATT | 2 cut(s) | 41, 155 |
| TaaI | ACNGT | 2 cut(s) | 79, 225 |
| TasI | AATT | 2 cut(s) | 41, 155 |
| TfiI | GAWTC | 2 cut(s) | 11, 217 |
| TscAI | CASTG | 1 cut(s) | 82 |
| TspRI | CASTG | 1 cut(s) | 82 |
| XapI | RAATTY | 1 cut(s) | 155 |
| XceI | RCATGY | 1 cut(s) | 169 |