Transcription initiation factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12610 AT4G12610 |
| fragaria_vesca | FvH4_2g22070 FvH4_2g22070 FvH4_2g22070 FvH4_3g01042 |
| malus_domestica | MD05G1357300.v1.1 MD10G1331000.v1.1 |
| prunus_persica | Prupe.4G011300_v2.0.a1 Prupe.4G011300_v2.0.a1 |
| pyrus_communis | pycom05g32330 pycom10g28050 |
| rosa_chinensis | RchiOBHm_Chr5g0001581 RchiOBHm_Chr6g0288941 |
| rosa_laevigata | RLG00000009133 RLG00000012342 RLG00000012344 RLG00000030944 |
| rosa_multiflora | Rmu_sc0003749.1_g000001 Rmu_sc0006320.1_g000007 Rmu_sc0007182.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074740 Rroxscaffold_7G00179460 Rroxscaffold_7G00179470 Rroxscaffold_7G00179490 |
| rosa_rugosa | Rorug04G0391100 Rorug06G0199700 Rorug06G0201700 |
| rosa_samantha | Rh2BG455300 Rh2DG465300 Rh5AG012500 Rh5BG015400 Rh5CG013500 Rh5CG313700 Rh5DG013300 Rh6AG312800 Rh6BG317400 Rh6BG319600 Rh6CG326300 Rh6DG312400 |
| rosa_wichuraiana | Rw0G003180 Rw0G005580 Rw1G016380 Rw2G040560 Rw5G001200 Rw6G027030 Rw7G019510 Rw7G019540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 231 |
| AcsI | RAATTY | 2 cut(s) | 148, 222 |
| AluBI | AGCT | 2 cut(s) | 53, 68 |
| AluI | AGCT | 2 cut(s) | 53, 68 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| ApoI | RAATTY | 2 cut(s) | 148, 222 |
| AspS9I | GGNCC | 1 cut(s) | 247 |
| AsuHPI | GGTGA | 2 cut(s) | 110, 137 |
| AvaII | GGWCC | 1 cut(s) | 247 |
| AxyI | CCTNAGG | 1 cut(s) | 251 |
| BbvI | GCAGC | 1 cut(s) | 40 |
| BccI | CCATC | 1 cut(s) | 33 |
| BciVI | GTATCC | 1 cut(s) | 36 |
| BfuI | GTATCC | 1 cut(s) | 36 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| Bme18I | GGWCC | 1 cut(s) | 247 |
| BmgT120I | GGNCC | 1 cut(s) | 247 |
| BmrI | ACTGGG | 1 cut(s) | 217 |
| BmuI | ACTGGG | 1 cut(s) | 217 |
| Bse1I | ACTGG | 2 cut(s) | 127, 212 |
| Bse21I | CCTNAGG | 1 cut(s) | 251 |
| BseMII | CTCAG | 2 cut(s) | 168, 242 |
| BseNI | ACTGG | 2 cut(s) | 127, 212 |
| BseXI | GCAGC | 1 cut(s) | 40 |
| BslFI | GGGAC | 1 cut(s) | 179 |
| BsmFI | GGGAC | 1 cut(s) | 179 |
| BspACI | CCGC | 1 cut(s) | 231 |
| BspCNI | CTCAG | 2 cut(s) | 167, 243 |
| BsrI | ACTGG | 2 cut(s) | 127, 212 |
| Bst4CI | ACNGT | 2 cut(s) | 8, 104 |
| BstDEI | CTNAG | 2 cut(s) | 154, 251 |
| BstV1I | GCAGC | 1 cut(s) | 40 |
| Bsu36I | CCTNAGG | 1 cut(s) | 251 |
| BsuI | GTATCC | 1 cut(s) | 36 |
| BtsIMutI | CAGTG | 1 cut(s) | 109 |
| Cfr13I | GGNCC | 1 cut(s) | 247 |
| CviAII | CATG | 2 cut(s) | 32, 215 |
| CviJI | RGCY | 2 cut(s) | 53, 68 |
| CviKI_1 | RGCY | 2 cut(s) | 53, 68 |
| DdeI | CTNAG | 2 cut(s) | 154, 251 |
| Eco47I | GGWCC | 1 cut(s) | 247 |
| Eco81I | CCTNAGG | 1 cut(s) | 251 |
| FaeI | CATG | 2 cut(s) | 35, 218 |
| FaiI | YATR | 5 cut(s) | 27, 33, 76, 78, 216 |
| FaqI | GGGAC | 1 cut(s) | 179 |
| FatI | CATG | 2 cut(s) | 31, 214 |
| FauNDI | CATATG | 1 cut(s) | 76 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| GluI | GCNGC | 1 cut(s) | 54 |
| Hin1II | CATG | 2 cut(s) | 35, 218 |
| HphI | GGTGA | 2 cut(s) | 110, 137 |
| Hpy188I | TCNGA | 1 cut(s) | 157 |
| Hpy188III | TCNNGA | 1 cut(s) | 250 |
| HpyCH4III | ACNGT | 2 cut(s) | 8, 104 |
| HpyCH4V | TGCA | 2 cut(s) | 56, 74 |
| HpyF3I | CTNAG | 2 cut(s) | 154, 251 |
| Hsp92II | CATG | 2 cut(s) | 35, 218 |
| LmnI | GCTCC | 2 cut(s) | 65, 211 |
| LpnPI | CCDG | 2 cut(s) | 108, 193 |
| Lsp1109I | GCAGC | 1 cut(s) | 40 |
| MaeIII | GTNAC | 1 cut(s) | 98 |
| MboII | GAAGA | 1 cut(s) | 198 |
| MluCI | AATT | 2 cut(s) | 148, 222 |
| MnlI | CCTC | 2 cut(s) | 176, 246 |
| MspA1I | CMGCKG | 1 cut(s) | 231 |
| NdeI | CATATG | 1 cut(s) | 76 |
| NlaIII | CATG | 2 cut(s) | 35, 218 |
| NmuCI | GTSAC | 1 cut(s) | 98 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| PspPI | GGNCC | 1 cut(s) | 247 |
| SatI | GCNGC | 1 cut(s) | 54 |
| Sau96I | GGNCC | 1 cut(s) | 247 |
| SetI | ASST | 2 cut(s) | 55, 70 |
| SgeI | CNNG | 5 cut(s) | 44, 128, 135, 220, 227 |
| SinI | GGWCC | 1 cut(s) | 247 |
| Sse9I | AATT | 2 cut(s) | 148, 222 |
| SsiI | CCGC | 1 cut(s) | 231 |
| TaaI | ACNGT | 2 cut(s) | 8, 104 |
| TasI | AATT | 2 cut(s) | 148, 222 |
| TscAI | CASTG | 1 cut(s) | 109 |
| TseFI | GTSAC | 1 cut(s) | 98 |
| TseI | GCWGC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 6 cut(s) | 17, 42, 48, 156, 234, 254 |
| TspGWI | ACGGA | 1 cut(s) | 183 |
| TspRI | CASTG | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 1 cut(s) | 247 |
| XapI | RAATTY | 2 cut(s) | 148, 222 |