Rh6DG312400

Transcription initiation factor IIF subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0001724
Physical Location & Seq
Reverse (-)
51355663 .. 51362903
7241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG312400.1

Sequence Viewer

Length: 1995 bp
ATGAACCGGGTTTGTGATGGTTTTGTGGTCATGGGAAGTATGATTAGGAAGGGTTATAGACCAACTACTGTGACTTTTACTTCTTTGGTTAAAGGGCTGTGTATGGAGAATAGGATTGATGAGGCAAACAGGTTGTTTGAGAAAATGATCAAGTTCAGGTGTCAGCCTAGTGTGATTTGTTATGGTACTTTGATTAATGGGTTGTGCCGAATGGGCAAGACAGATGTTGCACTTAAGTTACATGAAGAAATGAATAGTGGGAATGGTGTTAGGTTTAGGCCGAATACTGTGACTTTTACATCTTTGATCCAGGGTTTGTGTGTGGAGGATAGGATAGATGAGGCAACCAGTTTGTTTGAGAAAATGAAGAAGTTGCGGTGTCATCCTAGCGTGATTACATATGGTACTTTGATTAATGGGTTTTGCAGAACAGGCAAGACAGATGTTGCACTTAGTTTACATGAAGAAATGGCTAATGAGAATGGTGGATATGGTGTTGATTCCATGGTGTTGCATAGAAGAGAGGCTCACCTCAAAAAGTTGATGAGTGAACATGAGCTGTGGGTCTTCTCAAGCCTTTTGTTGGATTCCTTTTTCATGATGGGCACAAATATTTCTCAACTGATGTGCAGGCTGGCAAATTTGAGTCTGGGCAGCTTGGGAAAACTATCAATGACTCAGCAGAAAGCCAAGTGCTCTCATTGTGGTGCTGTTCTCACCCGCTTGATTCGAGAGTATGACGTTGTGCGTGCAAACAATGATGACAAGAACTACTTCATCGGTAGATTCTCGACAGGACTGCCCAACTTCTCCAAGAACAAGTCTCTCTGTAAAAACAAGGATAAGCCGTGGGTCTTGGAGGATGAGACTGGACGGTCCGAGTACCAGGGCCATCTTCAAGAATTGTTCAACTTTGACAAAGTTGCACAGTATAATAAGCAACTTACTTTGGAGGAAGCGGAAGCAAAGATGATCAATAAGAAAAAGATGCAAGATTTATATCAAAGAAGGCTTATGAAAGCTGCAACTAATGGAGCTGTTGCATTTGGAAAAGTGAACAAATTTGGGGGCAAGGATAGCAAACAAAAAACTTGTTTTAATGATGATGAAGGGAACATCTCAGATAATGATGATGAGGAACAAGAGGGAGCAAGGAAAAATAGACTTGGACTCAAGAGAAGAGGTGGTGATGATGAAGGAAACATCTCAGATAATAGTGATGAGGAAGAAGATGTAGCAAGGAAAAACAGACTTGAACTCGAGAGAACAGGTGGCGATGATGAAGGTACAAGTGGAGATGATGACTTTGATAATGATGATAGTGAGAAGGATGATGACTGGAAGCTTGAGGAGATTTTCAGCGATGATGATGAAAATAATACCAAGGAAATAGAAGACTTTGCAACCGAGGATGATGAGGAAGATGATAATAATGAAGAGGAGGGTGGACTCAGTGAATCCGGAAAAGAGTTGAAGAAGCTACTTGGGCACCTCACTGAGTCAGATACACAGGATGACAACGAAACTGAGGATGTAGCTTTGGTATATAATGCATGGACTAGGACCTTTCTCCCCCAATTGCTCAATTCTTTATGCTTTGTCCAGACTAATATTATAGAGAACAGTCATTCTGGATCGGCTCAGACTACCCCATCTCCCTCCAAGCCATCCAAAGGGATGAGAAAACAATATGATGATGATGATGTCGAGGCATTTAGCTGTGCACCTCCCCAGAAGTTGAAGACTGAAAATGATAAAAAACCTTCCATAAAAGAAGAGCCTGCATCTGCTAGTCCTATGAGTGAGGAAGAAATCAGGGCTGTTCTTAAGAAAGAACTAGCAATTTCCTTACAAGACCTTGTTGACCACTATCCAGGAAGAGTCGAATCGAATGAGGAGAAGAAGACTTTAATAGCAAGGTTGAGGAGTATGTCTTACAAAATACTATATATAAGAGACCCAAAGATGATGAAACCGGTTGCAATTTTGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0008022
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIIF_alpha

Protein Analysis

664

Amino Acids

75.18

Weight (kDa)

5.09

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 17 - 49 9.1e-11 PPR repeat
PPR_2 PF13041 21 - 70 3.5e-14 PPR repeat family
PPR PF01535 24 - 54 4.4e-06 PPR repeat
PPR_1 PF12854 54 - 84 5.7e-11 PPR repeat
PPR_2 PF13041 56 - 86 4.1e-06 PPR repeat family
PPR_3 PF13812 92 - 140 5.2e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 93 - 123 8.8e-10 PPR repeat
PPR_2 PF13041 94 - 143 3.5e-17 PPR repeat family
PPR PF01535 97 - 127 3e-07 PPR repeat
PPR_1 PF12854 127 - 157 6.5e-11 PPR repeat
PPR_2 PF13041 129 - 160 2.4e-06 PPR repeat family
PPR PF01535 132 - 159 2.9e-06 PPR repeat
TFIIF_alpha PF05793 299 - 645 5.8e-25 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 874
AccB1I GGYRCC 1 cut(s) 1488
AccIII TCCGGA 1 cut(s) 1460
AciI CCGC 3 cut(s) 376, 721, 959
AclWI GGATC 2 cut(s) 301, 1642
AcsI RAATTY 2 cut(s) 640, 1061
AfaI GTAC 4 cut(s) 187, 406, 884, 1288
AfiI CCNNNNNNNGG 2 cut(s) 583, 1673
AflII CTTAAG 2 cut(s) 233, 1826
AgeI ACCGGT 1 cut(s) 1975
AgsI TTSAA 5 cut(s) 899, 910, 1256, 1474, 1741
AjnI CCWGG 3 cut(s) 309, 885, 1873
AluBI AGCT 8 cut(s) 559, 657, 1022, 1037, 1345, 1480, 1538, 1719
AluI AGCT 8 cut(s) 559, 657, 1022, 1037, 1345, 1480, 1538, 1719
Alw21I GWGCWC 2 cut(s) 698, 1726
Alw26I GTCTC 3 cut(s) 828, 860, 1950
Alw44I GTGCAC 1 cut(s) 1722
AlwI GGATC 2 cut(s) 301, 1642
Ama87I CYCGRG 1 cut(s) 1259
Aor13HI TCCGGA 1 cut(s) 1460
AoxI GGCC 2 cut(s) 278, 889
ApaLI GTGCAC 1 cut(s) 1722
ApeKI GCWGC 2 cut(s) 654, 1022
ApoI RAATTY 2 cut(s) 640, 1061
AseI ATTAAT 2 cut(s) 195, 414
AsiGI ACCGGT 1 cut(s) 1975
Asp700I GAANNNNTTC 1 cut(s) 773
AspS9I GGNCC 3 cut(s) 876, 889, 1563
AsuC2I CCSGG 1 cut(s) 8
AsuHPI GGTGA 3 cut(s) 521, 709, 1199
AvaI CYCGRG 1 cut(s) 1259
AvaII GGWCC 2 cut(s) 876, 1563
BaeGI GKGCMC 3 cut(s) 608, 1491, 1726
BanI GGYRCC 1 cut(s) 1488
BbsI GAAGAC 4 cut(s) 559, 1401, 1748, 1910
Bbv12I GWGCWC 2 cut(s) 698, 1726
BbvI GCAGC 2 cut(s) 666, 1009
BccI CCATC 5 cut(s) 11, 595, 900, 1660, 1675
BceAI ACGGC 1 cut(s) 832
BcgI CGANNNNNNTGC 2 cut(s) 781, 815
BciT130I CCWGG 3 cut(s) 311, 887, 1875
BclI TGATCA 2 cut(s) 147, 972
BcnI CCSGG 1 cut(s) 8
BcoDI GTCTC 3 cut(s) 828, 860, 1950
BfaI CTAG 5 cut(s) 168, 387, 1560, 1791, 1838
BfrI CTTAAG 2 cut(s) 233, 1826
BglI GCCNNNNNGGC 1 cut(s) 213
BisI GCNGC 2 cut(s) 655, 1023
BlsI GCNGC 2 cut(s) 656, 1024
Bme1390I CCNGG 4 cut(s) 8, 311, 887, 1875
Bme18I GGWCC 2 cut(s) 876, 1563
BmeT110I CYCGRG 1 cut(s) 1259
BmgT120I GGNCC 3 cut(s) 876, 889, 1563
BmiI GGNNCC 1 cut(s) 1490
BmrFI CCNGG 4 cut(s) 8, 311, 887, 1875
BmsI GCATC 2 cut(s) 978, 1793
BpiI GAAGAC 4 cut(s) 559, 1401, 1748, 1910
BpuEI CTTGAG 3 cut(s) 556, 1157, 1367
BpuMI CCSGG 1 cut(s) 8
BsaBI GATNNNNATC 1 cut(s) 999
BsaI GGTCTC 1 cut(s) 1950
BsaJI CCNNGG 6 cut(s) 310, 504, 848, 886, 1383, 1407
BsaWI WCCGGW 2 cut(s) 1460, 1975
BsaXI ACNNNNNCTCC 2 cut(s) 1639, 1669
Bsc4I CCNNNNNNNGG 2 cut(s) 583, 1673
Bse118I RCCGGY 1 cut(s) 1975
Bse1I ACTGG 3 cut(s) 348, 874, 1343
Bse8I GATNNNNATC 1 cut(s) 999
BseAI TCCGGA 1 cut(s) 1460
BseBI CCWGG 3 cut(s) 311, 887, 1875
BseDI CCNNGG 6 cut(s) 310, 504, 848, 886, 1383, 1407
BseGI GGATG 8 cut(s) 382, 868, 1336, 1417, 1519, 1537, 1667, 1683
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 2 cut(s) 583, 1673
BseMII CTCAG 7 cut(s) 692, 1134, 1221, 1465, 1488, 1518, 1655
BseNI ACTGG 3 cut(s) 348, 874, 1343
BseRI GAGGAG 4 cut(s) 1364, 1454, 1910, 1939
BseSI GKGCMC 3 cut(s) 608, 1491, 1726
BseXI GCAGC 2 cut(s) 666, 1009
BsgI GTGCAG 1 cut(s) 649
BshFI GGCC 2 cut(s) 280, 891
BshNI GGYRCC 1 cut(s) 1488
BshTI ACCGGT 1 cut(s) 1975
BsiHKAI GWGCWC 2 cut(s) 698, 1726
BsiHKCI CYCGRG 1 cut(s) 1259
BsiSI CCGG 3 cut(s) 7, 1461, 1976
BslI CCNNNNNNNGG 2 cut(s) 583, 1673
BsmAI GTCTC 3 cut(s) 828, 860, 1950
BsnI GGCC 2 cut(s) 280, 891
Bso31I GGTCTC 1 cut(s) 1950
BsoBI CYCGRG 1 cut(s) 1259
Bsp1286I GDGCHC 4 cut(s) 608, 698, 1491, 1726
Bsp13I TCCGGA 1 cut(s) 1460
Bsp143I GATC 4 cut(s) 147, 306, 972, 1634
Bsp19I CCATGG 1 cut(s) 504
BspACI CCGC 3 cut(s) 376, 721, 959
BspANI GGCC 2 cut(s) 280, 891
BspCNI CTCAG 7 cut(s) 691, 1133, 1220, 1464, 1489, 1519, 1654
BspEI TCCGGA 1 cut(s) 1460
BspHI TCATGA 1 cut(s) 597
BspLI GGNNCC 1 cut(s) 1490
BspPI GGATC 2 cut(s) 301, 1642
BspQI GCTCTTC 1 cut(s) 1770
BspT107I GGYRCC 1 cut(s) 1488
BspTI CTTAAG 2 cut(s) 233, 1826
BspTNI GGTCTC 1 cut(s) 1950
BsrFI RCCGGY 1 cut(s) 1975
BsrI ACTGG 3 cut(s) 348, 874, 1343
BssAI RCCGGY 1 cut(s) 1975
BssECI CCNNGG 6 cut(s) 310, 504, 848, 886, 1383, 1407
BssMI GATC 4 cut(s) 147, 306, 972, 1634
BssT1I CCWWGG 2 cut(s) 504, 1383
Bst2UI CCWGG 3 cut(s) 311, 887, 1875
Bst4CI ACNGT 5 cut(s) 70, 289, 876, 930, 1625
Bst6I CTCTTC 5 cut(s) 514, 1174, 1431, 1770, 1873
BstAFI CTTAAG 2 cut(s) 233, 1826
BstC8I GCNNGC 4 cut(s) 632, 636, 750, 1782
BstDEI CTNAG 8 cut(s) 452, 678, 1120, 1207, 1451, 1497, 1527, 1641
BstDSI CCRYGG 2 cut(s) 504, 848
BstF5I GGATG 8 cut(s) 382, 868, 1336, 1417, 1519, 1537, 1667, 1683
BstKTI GATC 4 cut(s) 150, 309, 975, 1637
BstMAI GTCTC 3 cut(s) 828, 860, 1950
BstMBI GATC 4 cut(s) 147, 306, 972, 1634
BstMWI GCNNNNNNNGC 4 cut(s) 213, 432, 1077, 1486
BstNI CCWGG 3 cut(s) 311, 887, 1875
BstSCI CCNGG 4 cut(s) 6, 309, 885, 1873
BstSLI GKGCMC 3 cut(s) 608, 1491, 1726
BstV1I GCAGC 2 cut(s) 666, 1009
BstV2I GAAGAC 4 cut(s) 559, 1401, 1748, 1910
BsuRI GGCC 2 cut(s) 280, 891
BtgI CCRYGG 2 cut(s) 504, 848
BtgZI GCGATG 2 cut(s) 1290, 1377
BtsCI GGATG 8 cut(s) 382, 868, 1336, 1417, 1519, 1537, 1667, 1683
BtsIMutI CAGTG 2 cut(s) 1459, 1494
Cac8I GCNNGC 4 cut(s) 632, 636, 750, 1782
CciI TCATGA 1 cut(s) 597
Cfr10I RCCGGY 1 cut(s) 1975
Cfr13I GGNCC 3 cut(s) 876, 889, 1563
CpoI CGGWCCG 1 cut(s) 876
Csp6I GTAC 4 cut(s) 186, 405, 883, 1287
CspAI ACCGGT 1 cut(s) 1975
CspI CGGWCCG 1 cut(s) 876
CviAII CATG 7 cut(s) 31, 242, 461, 505, 554, 598, 1554
CviQI GTAC 4 cut(s) 186, 405, 883, 1287
DdeI CTNAG 8 cut(s) 452, 678, 1120, 1207, 1451, 1497, 1527, 1641
DpnI GATC 4 cut(s) 149, 308, 974, 1636
DpnII GATC 4 cut(s) 147, 306, 972, 1634
DrdI GACNNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 874
Eam1104I CTCTTC 5 cut(s) 514, 1174, 1431, 1770, 1873
EarI CTCTTC 5 cut(s) 514, 1174, 1431, 1770, 1873
Eco130I CCWWGG 2 cut(s) 504, 1383
Eco31I GGTCTC 1 cut(s) 1950
Eco47I GGWCC 2 cut(s) 876, 1563
Eco88I CYCGRG 1 cut(s) 1259
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRII CCWGG 3 cut(s) 309, 885, 1873
EcoT14I CCWWGG 2 cut(s) 504, 1383
EcoT22I ATGCAT 1 cut(s) 1555
ErhI CCWWGG 2 cut(s) 504, 1383
FaeI CATG 7 cut(s) 34, 245, 464, 508, 557, 601, 1557
FalI AAGNNNNNCTT 2 cut(s) 758, 790
FatI CATG 7 cut(s) 30, 241, 460, 504, 553, 597, 1553
FauI CCCGC 1 cut(s) 728
FauNDI CATATG 1 cut(s) 400
FbaI TGATCA 2 cut(s) 147, 972
Fnu4HI GCNGC 2 cut(s) 655, 1023
FokI GGATG 8 cut(s) 369, 875, 1343, 1424, 1526, 1544, 1654, 1690
Fsp4HI GCNGC 2 cut(s) 655, 1023
FspBI CTAG 5 cut(s) 168, 387, 1560, 1791, 1838
GluI GCNGC 2 cut(s) 655, 1023
HaeIII GGCC 2 cut(s) 280, 891
HapII CCGG 3 cut(s) 7, 1461, 1976
Hin1II CATG 7 cut(s) 34, 245, 464, 508, 557, 601, 1557
HincII GTYRAC 1 cut(s) 1864
HindII GTYRAC 1 cut(s) 1864
HindIII AAGCTT 1 cut(s) 1343
HpaII CCGG 3 cut(s) 7, 1461, 1976
HphI GGTGA 3 cut(s) 521, 709, 1199
Hpy166II GTNNAC 6 cut(s) 458, 551, 1057, 1448, 1724, 1864
Hpy188I TCNGA 5 cut(s) 880, 1123, 1210, 1504, 1644
Hpy188III TCNNGA 9 cut(s) 598, 731, 790, 899, 1174, 1261, 1461, 1603, 1632
Hpy8I GTNNAC 6 cut(s) 458, 551, 1057, 1448, 1724, 1864
HpyAV CCTTC 7 cut(s) 43, 1002, 1103, 1190, 1277, 1321, 1773
HpyCH4III ACNGT 5 cut(s) 70, 289, 876, 930, 1625
HpyCH4IV ACGT 1 cut(s) 741
HpyF10VI GCNNNNNNNGC 4 cut(s) 213, 432, 1077, 1486
HpyF3I CTNAG 8 cut(s) 452, 678, 1120, 1207, 1451, 1497, 1527, 1641
HpySE526I ACGT 1 cut(s) 741
Hsp92II CATG 7 cut(s) 34, 245, 464, 508, 557, 601, 1557
Kpn2I TCCGGA 1 cut(s) 1460
Ksp22I TGATCA 2 cut(s) 147, 972
Kzo9I GATC 4 cut(s) 147, 306, 972, 1634
LguI GCTCTTC 1 cut(s) 1770
LmnI GCTCC 2 cut(s) 1034, 1148
Lsp1109I GCAGC 2 cut(s) 666, 1009
LweI GCATC 2 cut(s) 978, 1793
MaeI CTAG 5 cut(s) 168, 387, 1560, 1791, 1838
MaeII ACGT 1 cut(s) 741
MaeIII GTNAC 3 cut(s) 70, 237, 289
MalI GATC 4 cut(s) 149, 308, 974, 1636
MboI GATC 4 cut(s) 147, 306, 972, 1634
MfeI CAATTG 1 cut(s) 1577
MhlI GDGCHC 4 cut(s) 608, 698, 1491, 1726
MluCI AATT 7 cut(s) 640, 902, 1061, 1577, 1585, 1842, 1983
MlyI GAGTC 6 cut(s) 655, 670, 1164, 1443, 1508, 1890
MmeI TCCRAC 1 cut(s) 564
Mph1103I ATGCAT 1 cut(s) 1555
MroI TCCGGA 1 cut(s) 1460
MroXI GAANNNNTTC 1 cut(s) 773
MseI TTAA 7 cut(s) 90, 195, 234, 414, 1098, 1827, 1910
MslI CAYNNNNRTG 1 cut(s) 705
MspCI CTTAAG 2 cut(s) 233, 1826
MspI CCGG 3 cut(s) 7, 1461, 1976
MspR9I CCNGG 4 cut(s) 8, 311, 887, 1875
MunI CAATTG 1 cut(s) 1577
MvaI CCWGG 3 cut(s) 311, 887, 1875
MwoI GCNNNNNNNGC 4 cut(s) 213, 432, 1077, 1486
NciI CCSGG 1 cut(s) 8
NcoI CCATGG 1 cut(s) 504
NdeI CATATG 1 cut(s) 400
NdeII GATC 4 cut(s) 147, 306, 972, 1634
NlaIII CATG 7 cut(s) 34, 245, 464, 508, 557, 601, 1557
NlaIV GGNNCC 1 cut(s) 1490
NmuCI GTSAC 2 cut(s) 70, 289
NsiI ATGCAT 1 cut(s) 1555
PaeR7I CTCGAG 1 cut(s) 1259
PagI TCATGA 1 cut(s) 597
PciSI GCTCTTC 1 cut(s) 1770
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 6 cut(s) 500, 587, 727, 786, 1457, 1886
PfoI TCCNGGA 1 cut(s) 1873
PinAI ACCGGT 1 cut(s) 1975
PkrI GCNGC 2 cut(s) 656, 1024
PleI GAGTC 6 cut(s) 654, 670, 1164, 1443, 1507, 1889
PpsI GAGTC 6 cut(s) 654, 670, 1164, 1443, 1507, 1889
PpuMI RGGWCCY 1 cut(s) 1563
PshBI ATTAAT 2 cut(s) 195, 414
Psp5II RGGWCCY 1 cut(s) 1563
Psp6I CCWGG 3 cut(s) 309, 885, 1873
PspGI CCWGG 3 cut(s) 309, 885, 1873
PspN4I GGNNCC 1 cut(s) 1490
PspPI GGNCC 3 cut(s) 876, 889, 1563
PspPPI RGGWCCY 1 cut(s) 1563
RsaI GTAC 4 cut(s) 187, 406, 884, 1288
RsaNI GTAC 4 cut(s) 186, 405, 883, 1287
RseI CAYNNNNRTG 1 cut(s) 705
Rsr2I CGGWCCG 1 cut(s) 876
RsrII CGGWCCG 1 cut(s) 876
SapI GCTCTTC 1 cut(s) 1770
SaqAI TTAA 7 cut(s) 90, 195, 234, 414, 1098, 1827, 1910
SatI GCNGC 2 cut(s) 655, 1023
Sau3AI GATC 4 cut(s) 147, 306, 972, 1634
Sau96I GGNCC 3 cut(s) 876, 889, 1563
SchI GAGTC 6 cut(s) 655, 670, 1164, 1443, 1508, 1890
ScrFI CCNGG 4 cut(s) 8, 311, 887, 1875
SduI GDGCHC 4 cut(s) 608, 698, 1491, 1726
SfaNI GCATC 2 cut(s) 978, 1793
Sfr274I CTCGAG 1 cut(s) 1259
SinI GGWCC 2 cut(s) 876, 1563
SlaI CTCGAG 1 cut(s) 1259
SmiMI CAYNNNNRTG 1 cut(s) 705
SmlI CTYRAG 6 cut(s) 233, 571, 1172, 1259, 1346, 1826
SmoI CTYRAG 6 cut(s) 233, 571, 1172, 1259, 1346, 1826
Sse9I AATT 7 cut(s) 640, 902, 1061, 1577, 1585, 1842, 1983
SsiI CCGC 3 cut(s) 376, 721, 959
SspI AATATT 2 cut(s) 613, 1612
SspMI CTAG 5 cut(s) 168, 387, 1560, 1791, 1838
StyD4I CCNGG 4 cut(s) 6, 309, 885, 1873
StyI CCWWGG 2 cut(s) 504, 1383
TaaI ACNGT 5 cut(s) 70, 289, 876, 930, 1625
TaiI ACGT 1 cut(s) 744
TaqI TCGA 6 cut(s) 730, 791, 1260, 1707, 1884, 1889
TasI AATT 7 cut(s) 640, 902, 1061, 1577, 1585, 1842, 1983
TfiI GAWTC 6 cut(s) 500, 587, 727, 786, 1457, 1886
Tru1I TTAA 7 cut(s) 90, 195, 234, 414, 1098, 1827, 1910
Tru9I TTAA 7 cut(s) 90, 195, 234, 414, 1098, 1827, 1910
TscAI CASTG 2 cut(s) 1459, 1501
TseFI GTSAC 2 cut(s) 70, 289
TseI GCWGC 2 cut(s) 654, 1022
Tsp45I GTSAC 2 cut(s) 70, 289
TspRI CASTG 2 cut(s) 1459, 1501
Vha464I CTTAAG 2 cut(s) 233, 1826
VneI GTGCAC 1 cut(s) 1722
VpaK11BI GGWCC 2 cut(s) 876, 1563
VspI ATTAAT 2 cut(s) 195, 414
XapI RAATTY 2 cut(s) 640, 1061
XhoI CTCGAG 1 cut(s) 1259
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 5 cut(s) 168, 387, 1560, 1791, 1838
Zsp2I ATGCAT 1 cut(s) 1555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.