Transcription initiation factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12610 AT4G12610 |
| fragaria_vesca | FvH4_2g22070 FvH4_2g22070 FvH4_2g22070 FvH4_3g01042 |
| malus_domestica | MD05G1357300.v1.1 MD10G1331000.v1.1 |
| prunus_persica | Prupe.4G011300_v2.0.a1 Prupe.4G011300_v2.0.a1 |
| pyrus_communis | pycom05g32330 pycom10g28050 |
| rosa_chinensis | RchiOBHm_Chr5g0001581 RchiOBHm_Chr6g0288941 |
| rosa_laevigata | RLG00000009133 RLG00000012342 RLG00000012344 RLG00000030944 |
| rosa_multiflora | Rmu_sc0003749.1_g000001 Rmu_sc0006320.1_g000007 Rmu_sc0007182.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074740 Rroxscaffold_7G00179460 Rroxscaffold_7G00179470 Rroxscaffold_7G00179490 |
| rosa_rugosa | Rorug04G0391100 Rorug06G0199700 Rorug06G0201700 |
| rosa_samantha | Rh2BG455300 Rh2DG465300 Rh5AG012500 Rh5BG015400 Rh5CG013500 Rh5CG313700 Rh5DG013300 Rh6AG312800 Rh6BG317400 Rh6BG319600 Rh6CG326300 Rh6DG312400 |
| rosa_wichuraiana | Rw0G003180 Rw0G005580 Rw1G016380 Rw2G040560 Rw5G001200 Rw6G027030 Rw7G019510 Rw7G019540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 105 |
| AcsI | RAATTY | 2 cut(s) | 76, 147 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 139, 171 |
| AluBI | AGCT | 2 cut(s) | 46, 97 |
| AluI | AGCT | 2 cut(s) | 46, 97 |
| ApoI | RAATTY | 2 cut(s) | 76, 147 |
| AseI | ATTAAT | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 1 cut(s) | 21 |
| AsuII | TTCGAA | 1 cut(s) | 80 |
| AxyI | CCTNAGG | 2 cut(s) | 62, 86 |
| BfuAI | ACCTGC | 1 cut(s) | 105 |
| BmiI | GGNNCC | 1 cut(s) | 92 |
| BpmI | CTGGAG | 1 cut(s) | 86 |
| Bpu14I | TTCGAA | 1 cut(s) | 80 |
| Bse21I | CCTNAGG | 2 cut(s) | 62, 86 |
| BseMII | CTCAG | 3 cut(s) | 53, 77, 157 |
| BseRI | GAGGAG | 2 cut(s) | 79, 89 |
| Bsp119I | TTCGAA | 1 cut(s) | 80 |
| BspCNI | CTCAG | 3 cut(s) | 54, 78, 158 |
| BspLI | GGNNCC | 1 cut(s) | 92 |
| BspMI | ACCTGC | 1 cut(s) | 105 |
| BspT104I | TTCGAA | 1 cut(s) | 80 |
| BstBI | TTCGAA | 1 cut(s) | 80 |
| BstDEI | CTNAG | 3 cut(s) | 62, 86, 166 |
| Bsu36I | CCTNAGG | 2 cut(s) | 62, 86 |
| BveI | ACCTGC | 1 cut(s) | 105 |
| CviJI | RGCY | 2 cut(s) | 46, 97 |
| CviKI_1 | RGCY | 2 cut(s) | 46, 97 |
| DdeI | CTNAG | 3 cut(s) | 62, 86, 166 |
| Eco81I | CCTNAGG | 2 cut(s) | 62, 86 |
| EcoRI | GAATTC | 1 cut(s) | 76 |
| FaiI | YATR | 1 cut(s) | 143 |
| GsuI | CTGGAG | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 21 |
| Hpy188I | TCNGA | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 61, 103 |
| HpyF3I | CTNAG | 3 cut(s) | 62, 86, 166 |
| LmnI | GCTCC | 1 cut(s) | 102 |
| LpnPI | CCDG | 5 cut(s) | 74, 98, 100, 107, 116 |
| MboII | GAAGA | 2 cut(s) | 31, 85 |
| MluCI | AATT | 3 cut(s) | 76, 107, 147 |
| MnlI | CCTC | 3 cut(s) | 57, 81, 110 |
| MseI | TTAA | 2 cut(s) | 56, 110 |
| NlaIV | GGNNCC | 1 cut(s) | 92 |
| NspV | TTCGAA | 1 cut(s) | 80 |
| PshBI | ATTAAT | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 92 |
| SaqAI | TTAA | 2 cut(s) | 56, 110 |
| SetI | ASST | 5 cut(s) | 48, 87, 92, 99, 119 |
| SfuI | TTCGAA | 1 cut(s) | 80 |
| SgeI | CNNG | 5 cut(s) | 73, 97, 106, 115, 127 |
| Sse9I | AATT | 3 cut(s) | 76, 107, 147 |
| SspI | AATATT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 80 |
| TasI | AATT | 3 cut(s) | 76, 107, 147 |
| Tru1I | TTAA | 2 cut(s) | 56, 110 |
| Tru9I | TTAA | 2 cut(s) | 56, 110 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| VspI | ATTAAT | 1 cut(s) | 56 |
| XapI | RAATTY | 2 cut(s) | 76, 147 |