Prupe.4G066000_v2.0.a1

Protein of unknown function (DUF1685)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
3158660 .. 3159503
844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G066000.1

Sequence Viewer

Length: 681 bp
ATGGAAGCAGACGAAGTAATGGAGCTCTATGATTCTTACTGGTTTCAGCTCGGAATCTTCGAAAAGCAACCAAATTCAGCAAACCTTCTTGAAATTGAAGAAGAACCATCAAAACCAGAGCTTTTACGCATCCCGACCCTCCTCCATACCAGGGCCATGAGCGACGAATTGAGCTCCAAAACAAGCTTCAACTTCAGCTTCTGTCCCTCACCAGACTCAGTCCTCCACAGACCAAAGCTCTCCACCATTCTTTCTGGCAAGGAAGCCACAGAAGTTGAAACCCCAATACAGAGACATGTCGAAGAGTCGCCAAAGAAGATTACAAGACGGAGGAGGAAGAAGAAGAAGAAGGGTGAGAGCAAGAGCTTGACAGACCTTCAATTTGAAGAGCTAAAAGGGTTTATGGATCTTGGTTTTGTTTTCTCAGAGGAAGACAAAGAAGATTCAAACTTGGCTTCGATCATTCCTGGGCTGCAAAGATTAGGGAAGGACGGCCAAGATGAGGTCTTTGATGAGTCTGCAATTCCAAGGCCTTACCTTTCTGAAGCTTGGAAGGTGAGGGATCAAAGAAAGAGAGAGAAGCCATTGATGAATTGGAGGTTTCCTGCGTTGGGCAATGAAATTGACATGAAAGACAATCTCAGATGGTGGGCTCACACAGTTGCTTCCACAGTTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

26.27

Weight (kDa)

5.75

Isoelectric Point (pI)

56.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 414, 570
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 1 cut(s) 73
AcuI CTGAAG 2 cut(s) 178, 564
AfiI CCNNNNNNNGG 3 cut(s) 151, 502, 611
AflIII ACRYGT 1 cut(s) 295
AgsI TTSAA 7 cut(s) 92, 98, 190, 278, 380, 386, 447
AjnI CCWGG 2 cut(s) 149, 466
AjuI GAANNNNNNNTTGG 2 cut(s) 170, 202
Alw21I GWGCWC 2 cut(s) 27, 176
Alw26I GTCTC 1 cut(s) 286
AlwI GGATC 2 cut(s) 414, 570
AlwNI CAGNNNCTG 1 cut(s) 201
AoxI GGCC 3 cut(s) 153, 493, 530
ApeKI GCWGC 1 cut(s) 472
ApoI RAATTY 1 cut(s) 73
ArsI GACNNNNNNTTYG 2 cut(s) 365, 397
AspS9I GGNCC 1 cut(s) 153
AsuHPI GGTGA 3 cut(s) 201, 365, 568
AsuII TTCGAA 1 cut(s) 60
BanII GRGCYC 3 cut(s) 27, 176, 655
BbsI GAAGAC 1 cut(s) 438
Bbv12I GWGCWC 2 cut(s) 27, 176
BbvI GCAGC 1 cut(s) 459
BccI CCATC 2 cut(s) 115, 639
BceAI ACGGC 1 cut(s) 508
BciT130I CCWGG 2 cut(s) 151, 468
BcoDI GTCTC 1 cut(s) 286
BisI GCNGC 1 cut(s) 473
BlsI GCNGC 1 cut(s) 474
Bme1390I CCNGG 2 cut(s) 151, 468
BmgT120I GGNCC 1 cut(s) 153
BmrFI CCNGG 2 cut(s) 151, 468
BmsI GCATC 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 438
Bpu14I TTCGAA 1 cut(s) 60
BsaJI CCNNGG 3 cut(s) 150, 467, 527
Bsc4I CCNNNNNNNGG 3 cut(s) 151, 502, 611
Bse1I ACTGG 1 cut(s) 44
Bse3DI GCAATG 1 cut(s) 622
BseBI CCWGG 2 cut(s) 151, 468
BseDI CCNNGG 3 cut(s) 150, 467, 527
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 3 cut(s) 151, 502, 611
BseMI GCAATG 1 cut(s) 622
BseMII CTCAG 3 cut(s) 231, 438, 655
BseNI ACTGG 1 cut(s) 44
BseRI GAGGAG 2 cut(s) 131, 346
BseXI GCAGC 1 cut(s) 459
BshFI GGCC 3 cut(s) 155, 495, 532
BsiHKAI GWGCWC 2 cut(s) 27, 176
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 3 cut(s) 151, 502, 611
BsmAI GTCTC 1 cut(s) 286
BsmFI GGGAC 1 cut(s) 189
BsnI GGCC 3 cut(s) 155, 495, 532
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 3 cut(s) 27, 176, 655
Bsp143I GATC 3 cut(s) 406, 459, 562
BspANI GGCC 3 cut(s) 155, 495, 532
BspCNI CTCAG 3 cut(s) 230, 437, 654
BspPI GGATC 2 cut(s) 414, 570
BspQI GCTCTTC 1 cut(s) 381
BspT104I TTCGAA 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 622
BsrI ACTGG 1 cut(s) 44
BssECI CCNNGG 3 cut(s) 150, 467, 527
BssMI GATC 3 cut(s) 406, 459, 562
BssT1I CCWWGG 1 cut(s) 527
Bst2UI CCWGG 2 cut(s) 151, 468
Bst4CI ACNGT 2 cut(s) 661, 673
Bst6I CTCTTC 2 cut(s) 297, 381
BstBI TTCGAA 1 cut(s) 60
BstDEI CTNAG 3 cut(s) 217, 424, 641
BstF5I GGATG 1 cut(s) 129
BstKTI GATC 3 cut(s) 409, 462, 565
BstMAI GTCTC 1 cut(s) 286
BstMBI GATC 3 cut(s) 406, 459, 562
BstNI CCWGG 2 cut(s) 151, 468
BstNSI RCATGY 1 cut(s) 299
BstSCI CCNGG 2 cut(s) 149, 466
BstV1I GCAGC 1 cut(s) 459
BstV2I GAAGAC 1 cut(s) 438
BstX2I RGATCY 1 cut(s) 406
BstYI RGATCY 1 cut(s) 406
BsuRI GGCC 3 cut(s) 155, 495, 532
BtsCI GGATG 1 cut(s) 129
CaiI CAGNNNCTG 1 cut(s) 201
Cfr13I GGNCC 1 cut(s) 153
CspCI CAANNNNNGTGG 2 cut(s) 256, 291
CviAII CATG 3 cut(s) 157, 296, 628
DdeI CTNAG 3 cut(s) 217, 424, 641
DpnI GATC 3 cut(s) 408, 461, 564
DpnII GATC 3 cut(s) 406, 459, 562
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 2 cut(s) 297, 381
EarI CTCTTC 2 cut(s) 297, 381
Ecl136II GAGCTC 2 cut(s) 25, 174
Eco130I CCWWGG 1 cut(s) 527
Eco147I AGGCCT 1 cut(s) 532
Eco24I GRGCYC 3 cut(s) 27, 176, 655
Eco53kI GAGCTC 2 cut(s) 25, 174
Eco57I CTGAAG 2 cut(s) 178, 564
EcoICRI GAGCTC 2 cut(s) 25, 174
EcoRII CCWGG 2 cut(s) 149, 466
EcoT14I CCWWGG 1 cut(s) 527
EcoT38I GRGCYC 3 cut(s) 27, 176, 655
ErhI CCWWGG 1 cut(s) 527
FaeI CATG 3 cut(s) 160, 299, 631
FaiI YATR 6 cut(s) 30, 147, 158, 297, 404, 629
FaqI GGGAC 1 cut(s) 189
FatI CATG 3 cut(s) 156, 295, 627
Fnu4HI GCNGC 1 cut(s) 473
FokI GGATG 1 cut(s) 116
FriOI GRGCYC 3 cut(s) 27, 176, 655
Fsp4HI GCNGC 1 cut(s) 473
GluI GCNGC 1 cut(s) 473
HaeIII GGCC 3 cut(s) 155, 495, 532
Hin1II CATG 3 cut(s) 160, 299, 631
HindIII AAGCTT 2 cut(s) 184, 546
HinfI GANTC 6 cut(s) 32, 54, 215, 305, 443, 515
HphI GGTGA 3 cut(s) 201, 365, 568
Hpy188I TCNGA 4 cut(s) 53, 427, 544, 644
Hpy188III TCNNGA 2 cut(s) 89, 133
Hpy99I CGWCG 1 cut(s) 167
HpyAV CCTTC 5 cut(s) 95, 343, 386, 481, 547
HpyCH4III ACNGT 2 cut(s) 661, 673
HpyCH4V TGCA 2 cut(s) 475, 521
HpyF3I CTNAG 3 cut(s) 217, 424, 641
Hsp92II CATG 3 cut(s) 160, 299, 631
Kzo9I GATC 3 cut(s) 406, 459, 562
LguI GCTCTTC 1 cut(s) 381
LmnI GCTCC 2 cut(s) 22, 179
LpnPI CCDG 9 cut(s) 25, 129, 136, 163, 225, 240, 453, 480, 618
Lsp1109I GCAGC 1 cut(s) 459
LweI GCATC 1 cut(s) 138
MalI GATC 3 cut(s) 408, 461, 564
MboI GATC 3 cut(s) 406, 459, 562
MflI RGATCY 1 cut(s) 406
MhlI GDGCHC 3 cut(s) 27, 176, 655
MluCI AATT 7 cut(s) 73, 93, 167, 380, 522, 592, 621
MlyI GAGTC 3 cut(s) 209, 314, 524
MspR9I CCNGG 2 cut(s) 151, 468
MvaI CCWGG 2 cut(s) 151, 468
NdeII GATC 3 cut(s) 406, 459, 562
NlaIII CATG 3 cut(s) 160, 299, 631
NspI RCATGY 1 cut(s) 299
NspV TTCGAA 1 cut(s) 60
PceI AGGCCT 1 cut(s) 532
PciI ACATGT 1 cut(s) 295
PciSI GCTCTTC 1 cut(s) 381
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PfeI GAWTC 3 cut(s) 32, 54, 443
PflFI GACNNNGTC 1 cut(s) 218
PkrI GCNGC 1 cut(s) 474
PleI GAGTC 3 cut(s) 209, 313, 523
PpsI GAGTC 3 cut(s) 209, 313, 523
PscI ACATGT 1 cut(s) 295
Psp124BI GAGCTC 2 cut(s) 27, 176
Psp6I CCWGG 2 cut(s) 149, 466
PspGI CCWGG 2 cut(s) 149, 466
PspPI GGNCC 1 cut(s) 153
PstNI CAGNNNCTG 1 cut(s) 201
PsuI RGATCY 1 cut(s) 406
PsyI GACNNNGTC 1 cut(s) 218
SacI GAGCTC 2 cut(s) 27, 176
SapI GCTCTTC 1 cut(s) 381
SatI GCNGC 1 cut(s) 473
Sau3AI GATC 3 cut(s) 406, 459, 562
Sau96I GGNCC 1 cut(s) 153
SchI GAGTC 3 cut(s) 209, 314, 524
ScrFI CCNGG 2 cut(s) 151, 468
SduI GDGCHC 3 cut(s) 27, 176, 655
SfaNI GCATC 1 cut(s) 138
SfuI TTCGAA 1 cut(s) 60
Sse9I AATT 7 cut(s) 73, 93, 167, 380, 522, 592, 621
SseBI AGGCCT 1 cut(s) 532
SstI GAGCTC 2 cut(s) 27, 176
StuI AGGCCT 1 cut(s) 532
StyD4I CCNGG 2 cut(s) 149, 466
StyI CCWWGG 1 cut(s) 527
TaaI ACNGT 2 cut(s) 661, 673
TaqI TCGA 3 cut(s) 60, 300, 458
TasI AATT 7 cut(s) 73, 93, 167, 380, 522, 592, 621
TfiI GAWTC 3 cut(s) 32, 54, 443
TseI GCWGC 1 cut(s) 472
TspDTI ATGAA 3 cut(s) 605, 633, 644
TspGWI ACGGA 1 cut(s) 343
Tth111I GACNNNGTC 1 cut(s) 218
XapI RAATTY 1 cut(s) 73
XceI RCATGY 1 cut(s) 299
XcmI CCANNNNNNNNNTGG 1 cut(s) 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.