Rh2CG332000

Protein of unknown function (DUF1685)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
43614211 .. 43615627
1417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG332000.1

Sequence Viewer

Length: 780 bp
ATGGCTGCAGATGAAGTACCTCTGCTCAACCTCTTTGATTCCTACTGGTTTGAACACGCAGTTTTCAGTTCCAAACCCCATGCAGCAGCAGCAAACAACCCAAGTCTCCAACTGGACCAAGAAGATCAAATACTCCAAGAACCAAACCCTTCAGGATTGCCAACTCTTATCGTGAGGTCACTAAGTGACCAATTCTTGGACACCAAGTCAAGCCTTTTCTCCGATTCGAGCTTCTCTCCCCACTCGGTTCTCCCCACTCGGTCACGAAAGCTTCAGACAATCCCCTCCGGCAAAGAAGTACTCATAGACTTCTCTAGAGAGAGTGTTCCTGAAAAACAAGTACTTGAGGTTGGGTCAGCACCACTGAAGAAAAGGGTGTTGCACAGTGAAAGATCAAAAACAAGGAAAAGATTAGGGAGCAGCAAGAGCTTGTCGGACCTCGAGTTTGACGAGCTTAAAGGGTTTATGGATCTGGGGTTTGTGTTCACTGAGCAAGACAACAAGGACTCGAAGCTGGTTTCGATAATTCCCGGCTTGCAAAGACTAGGAGTTAGTGATGAAGGGGGAGAAGAAGATAGAGATGAAGAGAAGAGGATTGATGGAAGTCATCATCATTCACATGTTGTTTCCAGGCCTTATCTGTCTGAAGCTTGGGATGCTTTGGAATATCAAAGAAAAGAGGACCAGTTGATGAATTGGAGAGTTCCATCTGCTGTTGATAAAGAGATGAAGCATCATCTCAAGTTCTGGGCTCATACAGTTGCATCAACCGTAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

259

Amino Acids

29.35

Weight (kDa)

5.78

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 196
AclWI GGATC 1 cut(s) 477
AcuI CTGAAG 4 cut(s) 135, 257, 386, 666
AdeI CACNNNGTG 1 cut(s) 185
AfaI GTAC 3 cut(s) 18, 300, 342
AfiI CCNNNNNNNGG 1 cut(s) 196
AflIII ACRYGT 1 cut(s) 619
AgsI TTSAA 1 cut(s) 53
AhdI GACNNNNNGTC 1 cut(s) 205
AjnI CCWGG 1 cut(s) 629
AluBI AGCT 6 cut(s) 231, 271, 429, 454, 514, 650
AluI AGCT 6 cut(s) 231, 271, 429, 454, 514, 650
Alw26I GTCTC 1 cut(s) 110
AlwI GGATC 1 cut(s) 477
Ama87I CYCGRG 1 cut(s) 440
AoxI GGCC 1 cut(s) 632
ApeKI GCWGC 5 cut(s) 5, 83, 86, 89, 420
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AspS9I GGNCC 3 cut(s) 115, 436, 682
AsuC2I CCSGG 1 cut(s) 531
AvaI CYCGRG 1 cut(s) 440
AvaII GGWCC 3 cut(s) 115, 436, 682
BanII GRGCYC 1 cut(s) 754
BarI GAAGNNNNNNTAC 2 cut(s) 114, 146
BbvI GCAGC 4 cut(s) 95, 98, 101, 432
BccI CCATC 2 cut(s) 593, 715
BciT130I CCWGG 1 cut(s) 631
BcnI CCSGG 1 cut(s) 531
BcoDI GTCTC 1 cut(s) 110
BfaI CTAG 2 cut(s) 315, 545
BfmI CTRYAG 1 cut(s) 6
BisI GCNGC 5 cut(s) 6, 84, 87, 90, 421
BlsI GCNGC 5 cut(s) 7, 85, 88, 91, 422
BmcAI AGTACT 2 cut(s) 300, 342
Bme1390I CCNGG 2 cut(s) 531, 631
Bme18I GGWCC 3 cut(s) 115, 436, 682
BmeRI GACNNNNNGTC 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 440
BmgT120I GGNCC 3 cut(s) 115, 436, 682
BmrFI CCNGG 2 cut(s) 531, 631
BmsI GCATC 3 cut(s) 646, 742, 773
BplI GAGNNNNNCTC 2 cut(s) 220, 252
BpuEI CTTGAG 2 cut(s) 365, 725
BpuMI CCSGG 1 cut(s) 531
Bsc4I CCNNNNNNNGG 1 cut(s) 196
Bse1I ACTGG 3 cut(s) 50, 117, 685
BseBI CCWGG 1 cut(s) 631
BseGI GGATG 1 cut(s) 661
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMII CTCAG 1 cut(s) 480
BseNI ACTGG 3 cut(s) 50, 117, 685
BseXI GCAGC 4 cut(s) 95, 98, 101, 432
BshFI GGCC 1 cut(s) 634
BsiHKCI CYCGRG 1 cut(s) 440
BsiSI CCGG 2 cut(s) 288, 531
BslI CCNNNNNNNGG 1 cut(s) 196
BsmAI GTCTC 1 cut(s) 110
BsnI GGCC 1 cut(s) 634
BsoBI CYCGRG 1 cut(s) 440
Bsp1286I GDGCHC 1 cut(s) 754
Bsp143I GATC 3 cut(s) 124, 392, 469
BspANI GGCC 1 cut(s) 634
BspCNI CTCAG 1 cut(s) 481
BspMAI CTGCAG 1 cut(s) 10
BspPI GGATC 1 cut(s) 477
BsrI ACTGG 3 cut(s) 50, 117, 685
BssMI GATC 3 cut(s) 124, 392, 469
Bst2UI CCWGG 1 cut(s) 631
Bst4CI ACNGT 3 cut(s) 386, 760, 772
Bst6I CTCTTC 2 cut(s) 579, 584
BstC8I GCNNGC 1 cut(s) 536
BstDEI CTNAG 2 cut(s) 182, 489
BstF5I GGATG 1 cut(s) 661
BstKTI GATC 3 cut(s) 127, 395, 472
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 3 cut(s) 124, 392, 469
BstMWI GCNNNNNNNGC 3 cut(s) 89, 426, 656
BstNI CCWGG 1 cut(s) 631
BstNSI RCATGY 1 cut(s) 623
BstSCI CCNGG 2 cut(s) 529, 629
BstSFI CTRYAG 1 cut(s) 6
BstV1I GCAGC 4 cut(s) 95, 98, 101, 432
BstX2I RGATCY 1 cut(s) 469
BstYI RGATCY 1 cut(s) 469
BsuRI GGCC 1 cut(s) 634
BtsCI GGATG 1 cut(s) 661
BtsIMutI CAGTG 3 cut(s) 362, 391, 486
Cac8I GCNNGC 1 cut(s) 536
Cfr13I GGNCC 3 cut(s) 115, 436, 682
Csp6I GTAC 3 cut(s) 17, 299, 341
CviAII CATG 2 cut(s) 80, 620
CviQI GTAC 3 cut(s) 17, 299, 341
DdeI CTNAG 2 cut(s) 182, 489
DpnI GATC 3 cut(s) 126, 394, 471
DpnII GATC 3 cut(s) 124, 392, 469
DraIII CACNNNGTG 1 cut(s) 185
DriI GACNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 579, 584
Eam1105I GACNNNNNGTC 1 cut(s) 205
EarI CTCTTC 2 cut(s) 579, 584
Eco147I AGGCCT 1 cut(s) 634
Eco24I GRGCYC 1 cut(s) 754
Eco47I GGWCC 3 cut(s) 115, 436, 682
Eco57I CTGAAG 4 cut(s) 135, 257, 386, 666
Eco88I CYCGRG 1 cut(s) 440
EcoRII CCWGG 1 cut(s) 629
EcoT38I GRGCYC 1 cut(s) 754
FaeI CATG 2 cut(s) 83, 623
FaiI YATR 5 cut(s) 81, 305, 467, 621, 756
FatI CATG 2 cut(s) 79, 619
Fnu4HI GCNGC 5 cut(s) 6, 84, 87, 90, 421
FokI GGATG 1 cut(s) 668
FriOI GRGCYC 1 cut(s) 754
Fsp4HI GCNGC 5 cut(s) 6, 84, 87, 90, 421
FspBI CTAG 2 cut(s) 315, 545
GluI GCNGC 5 cut(s) 6, 84, 87, 90, 421
HaeIII GGCC 1 cut(s) 634
HapII CCGG 2 cut(s) 288, 531
Hin1II CATG 2 cut(s) 83, 623
HindIII AAGCTT 2 cut(s) 269, 648
HinfI GANTC 3 cut(s) 38, 224, 506
HpaII CCGG 2 cut(s) 288, 531
Hpy166II GTNNAC 1 cut(s) 486
Hpy188I TCNGA 4 cut(s) 223, 276, 436, 646
Hpy188III TCNNGA 5 cut(s) 153, 172, 264, 315, 329
Hpy8I GTNNAC 1 cut(s) 486
HpyAV CCTTC 2 cut(s) 159, 554
HpyCH4III ACNGT 3 cut(s) 386, 760, 772
HpyCH4V TGCA 5 cut(s) 8, 83, 382, 538, 764
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 426, 656
HpyF3I CTNAG 2 cut(s) 182, 489
Hsp92II CATG 2 cut(s) 83, 623
Kzo9I GATC 3 cut(s) 124, 392, 469
LmnI GCTCC 1 cut(s) 417
Lsp1109I GCAGC 4 cut(s) 95, 98, 101, 432
LweI GCATC 3 cut(s) 646, 742, 773
MaeI CTAG 2 cut(s) 315, 545
MaeIII GTNAC 3 cut(s) 177, 185, 261
MalI GATC 3 cut(s) 126, 394, 471
MboI GATC 3 cut(s) 124, 392, 469
MboII GAAGA 6 cut(s) 134, 379, 581, 584, 596, 601
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 1 cut(s) 754
MluCI AATT 3 cut(s) 191, 525, 694
MlyI GAGTC 1 cut(s) 500
MmeI TCCRAC 2 cut(s) 133, 414
MnlI CCTC 8 cut(s) 30, 41, 168, 295, 340, 449, 585, 673
MseI TTAA 1 cut(s) 456
MslI CAYNNNNRTG 1 cut(s) 618
MspI CCGG 2 cut(s) 288, 531
MspR9I CCNGG 2 cut(s) 531, 631
MvaI CCWGG 1 cut(s) 631
MwoI GCNNNNNNNGC 3 cut(s) 89, 426, 656
NciI CCSGG 1 cut(s) 531
NdeII GATC 3 cut(s) 124, 392, 469
NlaIII CATG 2 cut(s) 83, 623
NmuCI GTSAC 3 cut(s) 177, 185, 261
NspI RCATGY 1 cut(s) 623
PaeR7I CTCGAG 1 cut(s) 440
PceI AGGCCT 1 cut(s) 634
PciI ACATGT 1 cut(s) 619
PcsI WCGNNNNNNNCGW 1 cut(s) 447
PfeI GAWTC 2 cut(s) 38, 224
PflMI CCANNNNNTGG 1 cut(s) 196
PkrI GCNGC 5 cut(s) 7, 85, 88, 91, 422
PleI GAGTC 1 cut(s) 500
PpsI GAGTC 1 cut(s) 500
PscI ACATGT 1 cut(s) 619
Psp6I CCWGG 1 cut(s) 629
PspGI CCWGG 1 cut(s) 629
PspPI GGNCC 3 cut(s) 115, 436, 682
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 1 cut(s) 10
PsuI RGATCY 1 cut(s) 469
RsaI GTAC 3 cut(s) 18, 300, 342
RsaNI GTAC 3 cut(s) 17, 299, 341
RseI CAYNNNNRTG 1 cut(s) 618
SaqAI TTAA 1 cut(s) 456
SatI GCNGC 5 cut(s) 6, 84, 87, 90, 421
Sau3AI GATC 3 cut(s) 124, 392, 469
Sau96I GGNCC 3 cut(s) 115, 436, 682
ScaI AGTACT 2 cut(s) 300, 342
SchI GAGTC 1 cut(s) 500
ScrFI CCNGG 2 cut(s) 531, 631
SduI GDGCHC 1 cut(s) 754
SfaNI GCATC 3 cut(s) 646, 742, 773
SfcI CTRYAG 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 440
SinI GGWCC 3 cut(s) 115, 436, 682
SlaI CTCGAG 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 618
SmlI CTYRAG 3 cut(s) 344, 440, 740
SmoI CTYRAG 3 cut(s) 344, 440, 740
Sse9I AATT 3 cut(s) 191, 525, 694
SseBI AGGCCT 1 cut(s) 634
SspMI CTAG 2 cut(s) 315, 545
StuI AGGCCT 1 cut(s) 634
StyD4I CCNGG 2 cut(s) 529, 629
TaaI ACNGT 3 cut(s) 386, 760, 772
TaqI TCGA 4 cut(s) 227, 441, 509, 521
TaqII GACCGA 1 cut(s) 249
TasI AATT 3 cut(s) 191, 525, 694
TatI WGTACW 2 cut(s) 298, 340
TfiI GAWTC 2 cut(s) 38, 224
Tru1I TTAA 1 cut(s) 456
Tru9I TTAA 1 cut(s) 456
TscAI CASTG 3 cut(s) 369, 391, 493
TseFI GTSAC 3 cut(s) 177, 185, 261
TseI GCWGC 5 cut(s) 5, 83, 86, 89, 420
Tsp45I GTSAC 3 cut(s) 177, 185, 261
TspDTI ATGAA 5 cut(s) 27, 573, 597, 707, 743
TspRI CASTG 3 cut(s) 369, 391, 493
Van91I CCANNNNNTGG 1 cut(s) 196
VpaK11BI GGWCC 3 cut(s) 115, 436, 682
XbaI TCTAGA 1 cut(s) 314
XceI RCATGY 1 cut(s) 623
XhoI CTCGAG 1 cut(s) 440
XspI CTAG 2 cut(s) 315, 545
ZrmI AGTACT 2 cut(s) 300, 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.