Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002416

Physical Location & Seq

Genomic Coordinates Reverse (-)

9016880 .. 9019006

Gene Structure 2127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G157500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGGAAAATTGTTGCATGGCTTTGGCTTAGTTGCTTATGGTCTTGTACTAATTTTATGCCTTCATGAACACCAAATACATTGCTATGCTAAAGTAGATATCAGCAGCAGCTGTGACTTGTTTCAAGGGACTTGGGTTTATGATAATTCTACCTATCCACTCTATGACACTTCCAGCTGCCCTTTTATTGAGACAGAGTTTGACTGCCAGAAAAATGGACGGCCAGACAACCAATATCTCAAATATAGATGGCAGCCTGACGGTTGTGCATTGCCAAGATTCAATGGTCAGGACCTCTTGGGGAGTTTAAAGGGGAAGAAGCTACTATTCGTAGGGGATTCTCTAAGCCTCAACCAGTGGCAGTCACTAACATGCATGTTGCATGCTGCGGTTCCTCAAAACAATTATACCATAACAAGGAAAGGAGGCCTCTCTACGTTTTTTATGCCTGATTATGATGTTTCTGTTTTGTTATCGCGCAATGCGTTTCTGGTGGATCTAGTGAGAACAGAGGCAGGCATGGTTCTAAGGCTTGACTCCATTACAAATGGCAATGATTGGAAGGGATACGACATGCTCATCTTCAATACCTGGCATTGGTGGCTTCATAAAGGAAGCCGACAACCATGGGACTACATTGAATCAGGAGGACAGATACTGAAGGATATGGACCGCTTGGCTGCTTTTAAGGAGGGATTAACTACTTGGTCCAAGTGGGTGGATTCTAATGTTGATGCTAACAACACCAAAGTTTTCTTTCAAGGCATTTCTCCTTCCCATTACAATGGAAAAGAATGGGACGATCCAAATTCAGCAACATGCAGTGGACAAACGCAACCTGTGACTGGTAGAACATACCCAGCAGGTTCACCACCAGCAGCAACTGTGGTCAACGATGTGTTGACTGCCATGTCATCCTCAGTAACCTTGCTGGACATAACTCTACTATCGCAGTTGAGAAAAGATGGGCACCCTTCTATGTACGGCAATGGTGGAAGAACGGGAAACGATTGCAGCCACTGGTGCCTTGCCGGTGTCCCTGATACCTGGAATCAACTTTTTTATGCAACTCTTGTGACCAGTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

363

Amino Acids

40.52

Weight (kDa)

5.77

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14850 AT3G14850
fragaria_vesca	FvH4_3g17810 FvH4_3g17820 FvH4_3g17830
malus_domestica	MD03G1246700.v1.1 MD11G1262000.v1.1 MD11G1268700.v1.1 MD11G1268800.v1.1 MD11G1268900.v1.1
prunus_persica	Prupe.4G157200_v2.0.a1 Prupe.4G157400_v2.0.a1 Prupe.4G157400_v2.0.a1 Prupe.4G157400_v2.0.a1 Prupe.4G157500_v2.0.a1 Prupe.4G157600_v2.0.a1
pyrus_communis	pycom03g19570 pycom11g23100 pycom11g23770
rosa_chinensis	RchiOBHm_Chr5g0029591 RchiOBHm_Chr5g0029601 RchiOBHm_Chr5g0029611
rosa_laevigata	RLG00000033185 RLG00000033186 RLG00000033187
rosa_multiflora	Rmu_sc0001608.1_g000005 Rmu_sc0001608.1_g000006
rosa_roxburghii	Rroxscaffold_1G00050310 Rroxscaffold_1G00050320
rosa_samantha	Rh5AG207700 Rh5BG206200 Rh5BG206300 Rh5BG206400 Rh5CG228300 Rh5CG228400 Rh5CG228500 Rh5DG210000 Rh5DG210100
rosa_wichuraiana	Rw5G018880 Rw5G018890 Rw5G018900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	910
Acc36I	ACCTGC	1 cut(s)	854
AccB1I	GGYRCC	2 cut(s)	969, 1023
AccII	CGCG	1 cut(s)	478
AciI	CCGC	2 cut(s)	389, 673
AclWI	GGATC	2 cut(s)	504, 797
AcoI	YGGCCR	1 cut(s)	221
AcsI	RAATTY	1 cut(s)	808
AcuI	CTGAAG	1 cut(s)	680
AfaI	GTAC	2 cut(s)	48, 983
AfiI	CCNNNNNNNGG	3 cut(s)	417, 597, 845
AgsI	TTSAA	5 cut(s)	125, 283, 586, 641, 761
AjnI	CCWGG	2 cut(s)	590, 1046
AluBI	AGCT	3 cut(s)	111, 177, 322
AluI	AGCT	3 cut(s)	111, 177, 322
Alw26I	GTCTC	1 cut(s)	185
AlwI	GGATC	2 cut(s)	504, 797
AlwNI	CAGNNNCTG	4 cut(s)	111, 658, 884, 1020
AoxI	GGCC	2 cut(s)	221, 427
ApeKI	GCWGC	8 cut(s)	105, 108, 177, 253, 386, 680, 878, 1014
ApoI	RAATTY	1 cut(s)	808
AspLEI	GCGC	1 cut(s)	480
AspS9I	GGNCC	3 cut(s)	292, 670, 708
AsuHPI	GGTGA	1 cut(s)	861
AvaII	GGWCC	3 cut(s)	292, 670, 708
BaeGI	GKGCMC	1 cut(s)	972
BanI	GGYRCC	2 cut(s)	969, 1023
BbvI	GCAGC	8 cut(s)	117, 120, 164, 265, 373, 667, 890, 1026
BccI	CCATC	2 cut(s)	243, 959
BceAI	ACGGC	2 cut(s)	236, 1000
BciT130I	CCWGG	2 cut(s)	592, 1048
BciVI	GTATCC	1 cut(s)	560
BcoDI	GTCTC	1 cut(s)	185
BfaI	CTAG	1 cut(s)	500
BfuAI	ACCTGC	1 cut(s)	854
BfuI	GTATCC	1 cut(s)	560
BisI	GCNGC	8 cut(s)	106, 109, 178, 254, 387, 681, 879, 1015
BlsI	GCNGC	8 cut(s)	107, 110, 179, 255, 388, 682, 880, 1016
Bme1390I	CCNGG	2 cut(s)	592, 1048
Bme18I	GGWCC	3 cut(s)	292, 670, 708
BmgT120I	GGNCC	3 cut(s)	292, 670, 708
BmiI	GGNNCC	3 cut(s)	393, 971, 1025
BmrFI	CCNGG	2 cut(s)	592, 1048
BmsI	GCATC	1 cut(s)	724
BsaJI	CCNNGG	1 cut(s)	626
Bsc4I	CCNNNNNNNGG	3 cut(s)	417, 597, 845
Bse118I	RCCGGY	1 cut(s)	1031
Bse1I	ACTGG	4 cut(s)	355, 850, 1025, 1080
Bse3DI	GCAATG	5 cut(s)	79, 269, 487, 559, 994
BseBI	CCWGG	2 cut(s)	592, 1048
BseDI	CCNNGG	1 cut(s)	626
BseGI	GGATG	1 cut(s)	914
BseLI	CCNNNNNNNGG	3 cut(s)	417, 597, 845
BseMI	GCAATG	5 cut(s)	79, 269, 487, 559, 994
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	4 cut(s)	355, 850, 1025, 1080
BseSI	GKGCMC	1 cut(s)	972
BseXI	GCAGC	8 cut(s)	117, 120, 164, 265, 373, 667, 890, 1026
BseYI	CCCAGC	1 cut(s)	859
Bsh1236I	CGCG	1 cut(s)	478
BshFI	GGCC	2 cut(s)	223, 429
BshNI	GGYRCC	2 cut(s)	969, 1023
BsiSI	CCGG	1 cut(s)	1032
BslFI	GGGAC	4 cut(s)	142, 644, 812, 1022
BslI	CCNNNNNNNGG	3 cut(s)	417, 597, 845
BsmAI	GTCTC	1 cut(s)	185
BsmFI	GGGAC	4 cut(s)	142, 644, 812, 1022
BsnI	GGCC	2 cut(s)	223, 429
Bsp1286I	GDGCHC	1 cut(s)	972
Bsp143I	GATC	2 cut(s)	496, 802
Bsp19I	CCATGG	1 cut(s)	626
BspACI	CCGC	2 cut(s)	389, 673
BspANI	GGCC	2 cut(s)	223, 429
BspCNI	CTCAG	1 cut(s)	932
BspFNI	CGCG	1 cut(s)	478
BspHI	TCATGA	1 cut(s)	64
BspLI	GGNNCC	3 cut(s)	393, 971, 1025
BspMI	ACCTGC	1 cut(s)	854
BspPI	GGATC	2 cut(s)	504, 797
BspT107I	GGYRCC	2 cut(s)	969, 1023
BsrDI	GCAATG	5 cut(s)	79, 269, 487, 559, 994
BsrFI	RCCGGY	1 cut(s)	1031
BsrI	ACTGG	4 cut(s)	355, 850, 1025, 1080
BssAI	RCCGGY	1 cut(s)	1031
BssECI	CCNNGG	1 cut(s)	626
BssMI	GATC	2 cut(s)	496, 802
BssT1I	CCWWGG	1 cut(s)	626
Bst2UI	CCWGG	2 cut(s)	592, 1048
Bst4CI	ACNGT	2 cut(s)	263, 886
BstC8I	GCNNGC	2 cut(s)	384, 517
BstDEI	CTNAG	4 cut(s)	28, 344, 527, 919
BstDSI	CCRYGG	1 cut(s)	626
BstF5I	GGATG	1 cut(s)	914
BstFNI	CGCG	1 cut(s)	478
BstHHI	GCGC	1 cut(s)	480
BstKTI	GATC	2 cut(s)	499, 805
BstMAI	GTCTC	1 cut(s)	185
BstMBI	GATC	2 cut(s)	496, 802
BstMWI	GCNNNNNNNGC	2 cut(s)	601, 1023
BstNI	CCWGG	2 cut(s)	592, 1048
BstNSI	RCATGY	5 cut(s)	375, 379, 386, 577, 822
BstSCI	CCNGG	2 cut(s)	590, 1046
BstSLI	GKGCMC	1 cut(s)	972
BstUI	CGCG	1 cut(s)	478
BstV1I	GCAGC	8 cut(s)	117, 120, 164, 265, 373, 667, 890, 1026
BstX2I	RGATCY	1 cut(s)	496
BstXI	CCANNNNNNTGG	3 cut(s)	215, 718, 785
BstYI	RGATCY	1 cut(s)	496
BsuI	GTATCC	1 cut(s)	560
BsuRI	GGCC	2 cut(s)	223, 429
BtgI	CCRYGG	1 cut(s)	626
BtsCI	GGATG	1 cut(s)	914
BtsI	GCAGTG	1 cut(s)	829
BtsIMutI	CAGTG	4 cut(s)	362, 829, 1018, 1087
BveI	ACCTGC	1 cut(s)	854
Cac8I	GCNNGC	2 cut(s)	384, 517
CaiI	CAGNNNCTG	4 cut(s)	111, 658, 884, 1020
CciI	TCATGA	1 cut(s)	64
CfoI	GCGC	1 cut(s)	480
Cfr10I	RCCGGY	1 cut(s)	1031
Cfr13I	GGNCC	3 cut(s)	292, 670, 708
Csp6I	GTAC	2 cut(s)	47, 982
CviQI	GTAC	2 cut(s)	47, 982
DdeI	CTNAG	4 cut(s)	28, 344, 527, 919
DpnI	GATC	2 cut(s)	498, 804
DpnII	GATC	2 cut(s)	496, 802
DraI	TTTAAA	1 cut(s)	309
DrdI	GACNNNNNNGTC	1 cut(s)	910
DseDI	GACNNNNNNGTC	1 cut(s)	910
EaeI	YGGCCR	1 cut(s)	221
Eco130I	CCWWGG	1 cut(s)	626
Eco147I	AGGCCT	1 cut(s)	429
Eco32I	GATATC	1 cut(s)	100
Eco47I	GGWCC	3 cut(s)	292, 670, 708
Eco57I	CTGAAG	1 cut(s)	680
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRII	CCWGG	2 cut(s)	590, 1046
EcoRV	GATATC	1 cut(s)	100
EcoT14I	CCWWGG	1 cut(s)	626
EcoT22I	ATGCAT	1 cut(s)	377
ErhI	CCWWGG	1 cut(s)	626
FaqI	GGGAC	4 cut(s)	142, 644, 812, 1022
Fnu4HI	GCNGC	8 cut(s)	106, 109, 178, 254, 387, 681, 879, 1015
FokI	GGATG	1 cut(s)	901
Fsp4HI	GCNGC	8 cut(s)	106, 109, 178, 254, 387, 681, 879, 1015
FspBI	CTAG	1 cut(s)	500
GlaI	GCGC	1 cut(s)	479
GluI	GCNGC	8 cut(s)	106, 109, 178, 254, 387, 681, 879, 1015
GsaI	CCCAGC	1 cut(s)	863
HaeIII	GGCC	2 cut(s)	223, 429
HapII	CCGG	1 cut(s)	1032
HhaI	GCGC	1 cut(s)	480
Hin6I	GCGC	1 cut(s)	478
HinP1I	GCGC	1 cut(s)	478
HincII	GTYRAC	2 cut(s)	892, 903
HindII	GTYRAC	2 cut(s)	892, 903
HinfI	GANTC	6 cut(s)	279, 338, 536, 641, 722, 1051
HpaII	CCGG	1 cut(s)	1032
HphI	GGTGA	1 cut(s)	861
Hpy166II	GTNNAC	4 cut(s)	827, 869, 892, 903
Hpy188III	TCNNGA	3 cut(s)	65, 290, 645
Hpy8I	GTNNAC	4 cut(s)	827, 869, 892, 903
HpyAV	CCTTC	5 cut(s)	71, 556, 655, 783, 984
HpyCH4III	ACNGT	2 cut(s)	263, 886
HpyCH4IV	ACGT	1 cut(s)	437
HpyCH4V	TGCA	7 cut(s)	16, 269, 375, 382, 822, 1014, 1067
HpyF10VI	GCNNNNNNNGC	2 cut(s)	601, 1023
HpyF3I	CTNAG	4 cut(s)	28, 344, 527, 919
HpySE526I	ACGT	1 cut(s)	437
HspAI	GCGC	1 cut(s)	478
Kzo9I	GATC	2 cut(s)	496, 802
Lsp1109I	GCAGC	8 cut(s)	117, 120, 164, 265, 373, 667, 890, 1026
LweI	GCATC	1 cut(s)	724
MaeI	CTAG	1 cut(s)	500
MaeII	ACGT	1 cut(s)	437
MaeIII	GTNAC	6 cut(s)	113, 363, 841, 922, 1075, 1082
MalI	GATC	2 cut(s)	498, 804
MboI	GATC	2 cut(s)	496, 802
MboII	GAAGA	3 cut(s)	328, 574, 1008
MflI	RGATCY	1 cut(s)	496
MhlI	GDGCHC	1 cut(s)	972
MluCI	AATT	5 cut(s)	8, 51, 145, 403, 808
MlyI	GAGTC	1 cut(s)	530
MnlI	CCTC	9 cut(s)	305, 359, 405, 419, 440, 505, 641, 685, 928
Mph1103I	ATGCAT	1 cut(s)	377
MseI	TTAA	3 cut(s)	308, 687, 698
MslI	CAYNNNNRTG	3 cut(s)	84, 370, 783
MspA1I	CMGCKG	2 cut(s)	111, 177
MspI	CCGG	1 cut(s)	1032
MspR9I	CCNGG	2 cut(s)	592, 1048
MvaI	CCWGG	2 cut(s)	592, 1048
MvnI	CGCG	1 cut(s)	478
MwoI	GCNNNNNNNGC	2 cut(s)	601, 1023
NcoI	CCATGG	1 cut(s)	626
NdeII	GATC	2 cut(s)	496, 802
NlaIV	GGNNCC	3 cut(s)	393, 971, 1025
NmuCI	GTSAC	5 cut(s)	113, 363, 841, 1075, 1082
NsiI	ATGCAT	1 cut(s)	377
NspI	RCATGY	5 cut(s)	375, 379, 386, 577, 822
PaeI	GCATGC	1 cut(s)	386
PagI	TCATGA	1 cut(s)	64
PceI	AGGCCT	1 cut(s)	429
PcsI	WCGNNNNNNNCGW	1 cut(s)	482
PfeI	GAWTC	5 cut(s)	279, 338, 641, 722, 1051
PkrI	GCNGC	8 cut(s)	107, 110, 179, 255, 388, 682, 880, 1016
PleI	GAGTC	1 cut(s)	530
PpsI	GAGTC	1 cut(s)	530
PpuMI	RGGWCCY	1 cut(s)	292
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	2 cut(s)	590, 1046
PspFI	CCCAGC	1 cut(s)	859
PspGI	CCWGG	2 cut(s)	590, 1046
PspN4I	GGNNCC	3 cut(s)	393, 971, 1025
PspPI	GGNCC	3 cut(s)	292, 670, 708
PspPPI	RGGWCCY	1 cut(s)	292
PsrI	GAACNNNNNNTAC	2 cut(s)	60, 92
PstNI	CAGNNNCTG	4 cut(s)	111, 658, 884, 1020
PsuI	RGATCY	1 cut(s)	496
PvuII	CAGCTG	2 cut(s)	111, 177
RsaI	GTAC	2 cut(s)	48, 983
RsaNI	GTAC	2 cut(s)	47, 982
RseI	CAYNNNNRTG	3 cut(s)	84, 370, 783
SaqAI	TTAA	3 cut(s)	308, 687, 698
SatI	GCNGC	8 cut(s)	106, 109, 178, 254, 387, 681, 879, 1015
Sau3AI	GATC	2 cut(s)	496, 802
Sau96I	GGNCC	3 cut(s)	292, 670, 708
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	2 cut(s)	592, 1048
SduI	GDGCHC	1 cut(s)	972
SfaNI	GCATC	1 cut(s)	724
SinI	GGWCC	3 cut(s)	292, 670, 708
SmiMI	CAYNNNNRTG	3 cut(s)	84, 370, 783
SphI	GCATGC	1 cut(s)	386
Sse9I	AATT	5 cut(s)	8, 51, 145, 403, 808
SseBI	AGGCCT	1 cut(s)	429
SsiI	CCGC	2 cut(s)	389, 673
SspMI	CTAG	1 cut(s)	500
StuI	AGGCCT	1 cut(s)	429
StyD4I	CCNGG	2 cut(s)	590, 1046
StyI	CCWWGG	1 cut(s)	626
TaaI	ACNGT	2 cut(s)	263, 886
TaiI	ACGT	1 cut(s)	440
TasI	AATT	5 cut(s)	8, 51, 145, 403, 808
TatI	WGTACW	1 cut(s)	46
TfiI	GAWTC	5 cut(s)	279, 338, 641, 722, 1051
Tru1I	TTAA	3 cut(s)	308, 687, 698
Tru9I	TTAA	3 cut(s)	308, 687, 698
TscAI	CASTG	4 cut(s)	362, 829, 1025, 1087
TseFI	GTSAC	5 cut(s)	113, 363, 841, 1075, 1082
TseI	GCWGC	8 cut(s)	105, 108, 177, 253, 386, 680, 878, 1014
Tsp45I	GTSAC	5 cut(s)	113, 363, 841, 1075, 1082
TspDTI	ATGAA	3 cut(s)	53, 81, 596
TspRI	CASTG	4 cut(s)	362, 829, 1025, 1087
VpaK11BI	GGWCC	3 cut(s)	292, 670, 708
XapI	RAATTY	1 cut(s)	808
XceI	RCATGY	5 cut(s)	375, 379, 386, 577, 822
XspI	CTAG	1 cut(s)	500
Zsp2I	ATGCAT	1 cut(s)	377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.