Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002014

Physical Location & Seq

Genomic Coordinates Reverse (-)

941571 .. 945617

Gene Structure 4047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G009200.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 609 bp

ATGGAGGCAATGGTGAAGAAATACCAGCAGAGGTTCAGGAAGGTCAGGGACGAGATGGACCGCTGGTCCTCGCTTCAGTCGCGCTTGATTTCACAGTTCAGGAACGCCTCCTCCATCATCCAGAGGTTGCAGGTTCTCCTAGATTCCAAGAAGTATGTTCGTTTGAAGGACGTTGTTGGTATTCAAGAGGCAGTACTGGCGAAGCAGATGGAGTCGTTGCGGAAAATCTTGTTTTCCATGAACAAAACCATGGAAGAGTTTCATGGAATTGTATTGTCTCTTGGGAAGATTCATCGTGATGGTAGGCAGATGGTGAAAGGTGGTGGTTCTAATCAGCTGACTGTAAAACAACTGCAGCAACGAGTTGGTGTAAAACCCCGTCTTGCAGATTGCTTAGATGGGCTTATGCTTCTTCAGGACATGCATTGCTCTGAGTACCTTTTGAAATCATCATTGGTTTCAGCACTCTCAGCACTTACCTTTAAACCCAGGTGTGTGATTGCGAGTGATTTGGGAGCGCTCCAGCAGCTCTTGGTTGATCAGCCTAACATCCCGAATGAGGAGGTTCAATTCATCTTTGATATCATATTTGCAGAAGAAATTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CK2S

Protein Analysis

203

Amino Acids

23.11

Weight (kDa)

9.34

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43822
fragaria_vesca	FvH4_5g25620 FvH4_5g25620
malus_domestica	MD08G1245100.v1.1 MD15G1440200.v1.1
prunus_persica	Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1 Prupe.5G009200_v2.0.a1
pyrus_communis	pycom08g21270 pycom15g38810
rosa_chinensis	RchiOBHm_Chr3g0481381 RchiOBHm_Chr3g0481391 RchiOBHm_Chr7g0215911
rosa_laevigata	RLG00000002608 RLG00000023401
rosa_multiflora	Rmu_sc0000064.1_g000025 Rmu_sc0006240.1_g000005
rosa_roxburghii	Rroxscaffold_3G00243810
rosa_rugosa	Rorug03G0191700 Rorug07G0156800
rosa_samantha	Rh3AG242600 Rh3BG277600 Rh3CG272600 Rh3DG269600 Rh7AG294800 Rh7BG286800 Rh7CG314900 Rh7DG297600
rosa_wichuraiana	Rw3G021680 Rw7G025040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	121
AccII	CGCG	1 cut(s)	82
AciI	CCGC	2 cut(s)	61, 220
AcsI	RAATTY	1 cut(s)	600
AcuI	CTGAAG	2 cut(s)	59, 398
AfaI	GTAC	2 cut(s)	195, 437
AfeI	AGCGCT	1 cut(s)	519
AfiI	CCNNNNNNNGG	1 cut(s)	559
AgsI	TTSAA	4 cut(s)	166, 185, 445, 569
AhdI	GACNNNNNGTC	1 cut(s)	64
AjnI	CCWGG	1 cut(s)	488
AjuI	GAANNNNNNNTTGG	2 cut(s)	437, 469
AloI	GAACNNNNNNTCC	2 cut(s)	95, 127
AluBI	AGCT	2 cut(s)	337, 529
AluI	AGCT	2 cut(s)	337, 529
Alw26I	GTCTC	1 cut(s)	282
Aor51HI	AGCGCT	1 cut(s)	519
ApeKI	GCWGC	2 cut(s)	355, 526
ApoI	RAATTY	1 cut(s)	600
Asp700I	GAANNNNTTC	1 cut(s)	258
AspLEI	GCGC	2 cut(s)	84, 520
AspS9I	GGNCC	2 cut(s)	58, 66
AsuHPI	GGTGA	2 cut(s)	25, 325
AvaII	GGWCC	2 cut(s)	58, 66
BbvI	GCAGC	2 cut(s)	367, 538
BccI	CCATC	6 cut(s)	49, 122, 202, 293, 304, 392
BciT130I	CCWGG	1 cut(s)	490
BclI	TGATCA	1 cut(s)	538
BcoDI	GTCTC	1 cut(s)	282
BfaI	CTAG	1 cut(s)	140
BfmI	CTRYAG	1 cut(s)	353
BfoI	RGCGCY	1 cut(s)	521
BfuAI	ACCTGC	1 cut(s)	121
BisI	GCNGC	2 cut(s)	356, 527
BlsI	GCNGC	2 cut(s)	357, 528
BmcAI	AGTACT	1 cut(s)	195
Bme1390I	CCNGG	1 cut(s)	490
Bme18I	GGWCC	2 cut(s)	58, 66
BmeRI	GACNNNNNGTC	1 cut(s)	64
BmgT120I	GGNCC	2 cut(s)	58, 66
BmrFI	CCNGG	1 cut(s)	490
BpmI	CTGGAG	1 cut(s)	506
BsaJI	CCNNGG	2 cut(s)	249, 488
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	1 cut(s)	559
Bse1I	ACTGG	1 cut(s)	201
Bse3DI	GCAATG	2 cut(s)	15, 424
BseBI	CCWGG	1 cut(s)	490
BseDI	CCNNGG	2 cut(s)	249, 488
BseGI	GGATG	2 cut(s)	117, 549
BseLI	CCNNNNNNNGG	1 cut(s)	559
BseMI	GCAATG	2 cut(s)	15, 424
BseMII	CTCAG	2 cut(s)	423, 483
BseNI	ACTGG	1 cut(s)	201
BseRI	GAGGAG	2 cut(s)	100, 575
BseXI	GCAGC	2 cut(s)	367, 538
Bsh1236I	CGCG	1 cut(s)	82
BslFI	GGGAC	1 cut(s)	62
BslI	CCNNNNNNNGG	1 cut(s)	559
BsmAI	GTCTC	1 cut(s)	282
BsmFI	GGGAC	1 cut(s)	62
Bsp143I	GATC	1 cut(s)	538
Bsp19I	CCATGG	1 cut(s)	249
BspACI	CCGC	2 cut(s)	61, 220
BspCNI	CTCAG	2 cut(s)	424, 482
BspFNI	CGCG	1 cut(s)	82
BspMAI	CTGCAG	1 cut(s)	357
BspMI	ACCTGC	1 cut(s)	121
BsrDI	GCAATG	2 cut(s)	15, 424
BsrI	ACTGG	1 cut(s)	201
BssECI	CCNNGG	2 cut(s)	249, 488
BssMI	GATC	1 cut(s)	538
BssT1I	CCWWGG	1 cut(s)	249
Bst2UI	CCWGG	1 cut(s)	490
Bst4CI	ACNGT	2 cut(s)	96, 343
Bst6I	CTCTTC	1 cut(s)	249
BstDEI	CTNAG	3 cut(s)	394, 432, 469
BstDSI	CCRYGG	1 cut(s)	249
BstF5I	GGATG	2 cut(s)	117, 549
BstFNI	CGCG	1 cut(s)	82
BstH2I	RGCGCY	1 cut(s)	521
BstHHI	GCGC	2 cut(s)	84, 520
BstKTI	GATC	1 cut(s)	541
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	1 cut(s)	538
BstMWI	GCNNNNNNNGC	4 cut(s)	79, 197, 470, 526
BstNI	CCWGG	1 cut(s)	490
BstNSI	RCATGY	1 cut(s)	424
BstSCI	CCNGG	1 cut(s)	488
BstSFI	CTRYAG	1 cut(s)	353
BstUI	CGCG	1 cut(s)	82
BstV1I	GCAGC	2 cut(s)	367, 538
BtgI	CCRYGG	1 cut(s)	249
BtsCI	GGATG	2 cut(s)	117, 549
BveI	ACCTGC	1 cut(s)	121
CfoI	GCGC	2 cut(s)	84, 520
Cfr13I	GGNCC	2 cut(s)	58, 66
Csp6I	GTAC	2 cut(s)	194, 436
CviAII	CATG	4 cut(s)	238, 250, 263, 421
CviJI	RGCY	4 cut(s)	337, 403, 529, 544
CviKI_1	RGCY	4 cut(s)	337, 403, 529, 544
CviQI	GTAC	2 cut(s)	194, 436
DdeI	CTNAG	3 cut(s)	394, 432, 469
DpnI	GATC	1 cut(s)	540
DpnII	GATC	1 cut(s)	538
DraI	TTTAAA	1 cut(s)	484
DriI	GACNNNNNGTC	1 cut(s)	64
Eam1104I	CTCTTC	1 cut(s)	249
Eam1105I	GACNNNNNGTC	1 cut(s)	64
EarI	CTCTTC	1 cut(s)	249
Eco130I	CCWWGG	1 cut(s)	249
Eco32I	GATATC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	58, 66
Eco47III	AGCGCT	1 cut(s)	519
Eco57I	CTGAAG	2 cut(s)	59, 398
EcoRII	CCWGG	1 cut(s)	488
EcoRV	GATATC	1 cut(s)	583
EcoT14I	CCWWGG	1 cut(s)	249
EcoT22I	ATGCAT	1 cut(s)	426
ErhI	CCWWGG	1 cut(s)	249
FaeI	CATG	4 cut(s)	241, 253, 266, 424
FaiI	YATR	7 cut(s)	156, 239, 251, 264, 407, 422, 587
FaqI	GGGAC	1 cut(s)	62
FatI	CATG	4 cut(s)	237, 249, 262, 420
FbaI	TGATCA	1 cut(s)	538
Fnu4HI	GCNGC	2 cut(s)	356, 527
FokI	GGATG	2 cut(s)	104, 536
Fsp4HI	GCNGC	2 cut(s)	356, 527
FspBI	CTAG	1 cut(s)	140
GlaI	GCGC	2 cut(s)	83, 519
GluI	GCNGC	2 cut(s)	356, 527
GsuI	CTGGAG	1 cut(s)	506
HaeII	RGCGCY	1 cut(s)	521
HhaI	GCGC	2 cut(s)	84, 520
Hin1II	CATG	4 cut(s)	241, 253, 266, 424
Hin6I	GCGC	2 cut(s)	82, 518
HinP1I	GCGC	2 cut(s)	82, 518
HinfI	GANTC	3 cut(s)	143, 212, 289
HphI	GGTGA	2 cut(s)	25, 325
Hpy188I	TCNGA	1 cut(s)	433
Hpy188III	TCNNGA	7 cut(s)	37, 100, 121, 185, 296, 416, 553
HpyAV	CCTTC	2 cut(s)	34, 160
HpyCH4III	ACNGT	2 cut(s)	96, 343
HpyCH4IV	ACGT	1 cut(s)	171
HpyCH4V	TGCA	5 cut(s)	130, 355, 386, 424, 593
HpyF10VI	GCNNNNNNNGC	4 cut(s)	79, 197, 470, 526
HpyF3I	CTNAG	3 cut(s)	394, 432, 469
HpySE526I	ACGT	1 cut(s)	171
Hsp92II	CATG	4 cut(s)	241, 253, 266, 424
HspAI	GCGC	2 cut(s)	82, 518
Ksp22I	TGATCA	1 cut(s)	538
Kzo9I	GATC	1 cut(s)	538
LmnI	GCTCC	2 cut(s)	515, 525
Lsp1109I	GCAGC	2 cut(s)	367, 538
MaeI	CTAG	1 cut(s)	140
MaeII	ACGT	1 cut(s)	171
MalI	GATC	1 cut(s)	540
MboI	GATC	1 cut(s)	538
MboII	GAAGA	5 cut(s)	28, 266, 298, 404, 608
MluCI	AATT	3 cut(s)	267, 569, 600
MlyI	GAGTC	1 cut(s)	221
MnlI	CCTC	8 cut(s)	24, 79, 117, 118, 121, 181, 553, 556
Mph1103I	ATGCAT	1 cut(s)	426
MroXI	GAANNNNTTC	1 cut(s)	258
MseI	TTAA	1 cut(s)	483
MslI	CAYNNNNRTG	1 cut(s)	297
MspA1I	CMGCKG	2 cut(s)	63, 337
MspR9I	CCNGG	1 cut(s)	490
MvaI	CCWGG	1 cut(s)	490
MvnI	CGCG	1 cut(s)	82
MwoI	GCNNNNNNNGC	4 cut(s)	79, 197, 470, 526
NcoI	CCATGG	1 cut(s)	249
NdeII	GATC	1 cut(s)	538
NlaIII	CATG	4 cut(s)	241, 253, 266, 424
NsiI	ATGCAT	1 cut(s)	426
NspI	RCATGY	1 cut(s)	424
PdmI	GAANNNNTTC	1 cut(s)	258
PfeI	GAWTC	2 cut(s)	143, 289
PkrI	GCNGC	2 cut(s)	357, 528
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
Psp6I	CCWGG	1 cut(s)	488
PspGI	CCWGG	1 cut(s)	488
PspPI	GGNCC	2 cut(s)	58, 66
PstI	CTGCAG	1 cut(s)	357
PvuII	CAGCTG	1 cut(s)	337
RsaI	GTAC	2 cut(s)	195, 437
RsaNI	GTAC	2 cut(s)	194, 436
RseI	CAYNNNNRTG	1 cut(s)	297
SaqAI	TTAA	1 cut(s)	483
SatI	GCNGC	2 cut(s)	356, 527
Sau3AI	GATC	1 cut(s)	538
Sau96I	GGNCC	2 cut(s)	58, 66
ScaI	AGTACT	1 cut(s)	195
SchI	GAGTC	1 cut(s)	221
ScrFI	CCNGG	1 cut(s)	490
SfcI	CTRYAG	1 cut(s)	353
SinI	GGWCC	2 cut(s)	58, 66
SmiMI	CAYNNNNRTG	1 cut(s)	297
Sse9I	AATT	3 cut(s)	267, 569, 600
SsiI	CCGC	2 cut(s)	61, 220
SspMI	CTAG	1 cut(s)	140
StyD4I	CCNGG	1 cut(s)	488
StyI	CCWWGG	1 cut(s)	249
TaaI	ACNGT	2 cut(s)	96, 343
TaiI	ACGT	1 cut(s)	174
TasI	AATT	3 cut(s)	267, 569, 600
TatI	WGTACW	1 cut(s)	193
TfiI	GAWTC	2 cut(s)	143, 289
Tru1I	TTAA	1 cut(s)	483
Tru9I	TTAA	1 cut(s)	483
TseI	GCWGC	2 cut(s)	355, 526
TspDTI	ATGAA	4 cut(s)	251, 254, 281, 562
VpaK11BI	GGWCC	2 cut(s)	58, 66
XapI	RAATTY	1 cut(s)	600
XceI	RCATGY	1 cut(s)	424
XmnI	GAANNNNTTC	1 cut(s)	258
XspI	CTAG	1 cut(s)	140
ZrmI	AGTACT	1 cut(s)	195
Zsp2I	ATGCAT	1 cut(s)	426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.