Prupe.5G048900_v2.0.a1

invertase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
5183213 .. 5183993
781 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G048900.1

Sequence Viewer

Length: 552 bp
ATGAGGCGTTTCTCTTCATTTTCCAAGATTATCATCACTTTTCTGGTTCTGTTTCATAGCACAATTATGGGTTCTAACGATCTCATCCAACTCTCTTGCAAGAAGGCTTCACAAGGAGATCCAAATTTGAGCTACAAGTTTTGTGTTTCAAGCCTTGAGGCCAACGCCAAAGGCCATAGCTTAGACCTTCAAGAACTAGTCGTCATCTCACTCAACCTCACCATAGCCAATGCCACAAACATCAACTCCACCATTTCAAAGCTTTTGAAGGACAAAGCATTTGACAACTTTGCAAAGGAACGCTTGCGAGGCTGCTCCGAGCTCTACGCTGACGCCATTCCTACCCTACAAGAAGCTCTTTGTGCTTTTCAGTCCAAGGACTTTGCTAAGGCCAATATAGAAGTGAGTTCTGCAATGGATGCTTCTTCTACATGTGAAGATGGCTTCAAGGAGAAGAAAGGTGAAGTGTCTCCATTGAGAAAGGAGAATGATGTTTTCTTTCAACTGAACGCCATTTCTCTTGCTTTTATCAACACTTTGGCTTCAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

184

Amino Acids

20.1

Weight (kDa)

6.72

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 113
AcsI RAATTY 1 cut(s) 124
AcyI GRCGYC 1 cut(s) 333
AflIII ACRYGT 1 cut(s) 431
AgsI TTSAA 7 cut(s) 150, 191, 258, 268, 448, 503, 546
AhlI ACTAGT 1 cut(s) 196
AluBI AGCT 5 cut(s) 132, 180, 262, 322, 356
AluI AGCT 5 cut(s) 132, 180, 262, 322, 356
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 474
AlwI GGATC 1 cut(s) 113
AoxI GGCC 3 cut(s) 159, 172, 390
ApeKI GCWGC 1 cut(s) 312
ApoI RAATTY 1 cut(s) 124
ArsI GACNNNNNNTTYG 2 cut(s) 263, 295
AsuHPI GGTGA 2 cut(s) 211, 473
BanII GRGCYC 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 1 cut(s) 299
BccI CCATC 1 cut(s) 434
BcoDI GTCTC 1 cut(s) 474
BcuI ACTAGT 1 cut(s) 196
BfaI CTAG 1 cut(s) 197
BisI GCNGC 1 cut(s) 313
BlsI GCNGC 1 cut(s) 314
BmsI GCATC 1 cut(s) 409
Bpu10I CCTNAGC 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 176
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 333
BsaJI CCNNGG 1 cut(s) 375
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bse3DI GCAATG 1 cut(s) 420
Bse8I GATNNNNATC 1 cut(s) 32
BseDI CCNNGG 1 cut(s) 375
BseGI GGATG 2 cut(s) 84, 424
BseJI GATNNNNATC 1 cut(s) 32
BseMI GCAATG 1 cut(s) 420
BseXI GCAGC 1 cut(s) 299
BshFI GGCC 3 cut(s) 161, 174, 392
BsiHKAI GWGCWC 1 cut(s) 324
BsmAI GTCTC 1 cut(s) 474
BsnI GGCC 3 cut(s) 161, 174, 392
Bsp1286I GDGCHC 1 cut(s) 324
Bsp143I GATC 2 cut(s) 79, 118
BspANI GGCC 3 cut(s) 161, 174, 392
BspPI GGATC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 420
BssECI CCNNGG 1 cut(s) 375
BssMI GATC 2 cut(s) 79, 118
BssNI GRCGYC 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 375
Bst6I CTCTTC 1 cut(s) 19
BstACI GRCGYC 1 cut(s) 333
BstAPI GCANNNNNTGC 1 cut(s) 419
BstC8I GCNNGC 1 cut(s) 305
BstDEI CTNAG 2 cut(s) 181, 387
BstF5I GGATG 2 cut(s) 84, 424
BstKTI GATC 2 cut(s) 82, 121
BstMAI GTCTC 1 cut(s) 474
BstMBI GATC 2 cut(s) 79, 118
BstMWI GCNNNNNNNGC 3 cut(s) 309, 362, 419
BstNSI RCATGY 1 cut(s) 435
BstV1I GCAGC 1 cut(s) 299
BstX2I RGATCY 1 cut(s) 118
BstYI RGATCY 1 cut(s) 118
BsuRI GGCC 3 cut(s) 161, 174, 392
BtsCI GGATG 2 cut(s) 84, 424
Cac8I GCNNGC 1 cut(s) 305
CseI GACGC 1 cut(s) 341
CviAII CATG 1 cut(s) 432
DdeI CTNAG 2 cut(s) 181, 387
DpnI GATC 2 cut(s) 81, 120
DpnII GATC 2 cut(s) 79, 118
Eam1104I CTCTTC 1 cut(s) 19
EarI CTCTTC 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 322
Eco130I CCWWGG 1 cut(s) 375
Eco24I GRGCYC 1 cut(s) 324
Eco53kI GAGCTC 1 cut(s) 322
EcoICRI GAGCTC 1 cut(s) 322
EcoT14I CCWWGG 1 cut(s) 375
EcoT38I GRGCYC 1 cut(s) 324
ErhI CCWWGG 1 cut(s) 375
FaeI CATG 1 cut(s) 435
FaiI YATR 7 cut(s) 57, 68, 177, 224, 398, 433, 550
FalI AAGNNNNNCTT 4 cut(s) 287, 319, 342, 374
FatI CATG 1 cut(s) 431
Fnu4HI GCNGC 1 cut(s) 313
FokI GGATG 2 cut(s) 71, 431
FriOI GRGCYC 1 cut(s) 324
Fsp4HI GCNGC 1 cut(s) 313
FspBI CTAG 1 cut(s) 197
GluI GCNGC 1 cut(s) 313
HaeIII GGCC 3 cut(s) 161, 174, 392
HgaI GACGC 1 cut(s) 341
Hin1I GRCGYC 1 cut(s) 333
Hin1II CATG 1 cut(s) 435
HindIII AAGCTT 1 cut(s) 260
HphI GGTGA 2 cut(s) 211, 473
Hpy188I TCNGA 1 cut(s) 319
Hpy188III TCNNGA 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 97, 197, 262
HpyCH4V TGCA 3 cut(s) 99, 293, 413
HpyF10VI GCNNNNNNNGC 3 cut(s) 309, 362, 419
HpyF3I CTNAG 2 cut(s) 181, 387
Hsp92I GRCGYC 1 cut(s) 333
Hsp92II CATG 1 cut(s) 435
Kzo9I GATC 2 cut(s) 79, 118
LmnI GCTCC 1 cut(s) 320
LpnPI CCDG 1 cut(s) 29
Lsp1109I GCAGC 1 cut(s) 299
LweI GCATC 1 cut(s) 409
MaeI CTAG 1 cut(s) 197
MalI GATC 2 cut(s) 81, 120
MboI GATC 2 cut(s) 79, 118
MboII GAAGA 4 cut(s) 6, 417, 449, 466
MflI RGATCY 1 cut(s) 118
MhlI GDGCHC 1 cut(s) 324
MluCI AATT 2 cut(s) 63, 124
MmeI TCCRAC 1 cut(s) 112
MnlI CCTC 3 cut(s) 151, 227, 302
MslI CAYNNNNRTG 1 cut(s) 65
MwoI GCNNNNNNNGC 3 cut(s) 309, 362, 419
NdeII GATC 2 cut(s) 79, 118
NlaIII CATG 1 cut(s) 435
NspI RCATGY 1 cut(s) 435
PciI ACATGT 1 cut(s) 431
PkrI GCNGC 1 cut(s) 314
PscI ACATGT 1 cut(s) 431
Psp124BI GAGCTC 1 cut(s) 324
PsuI RGATCY 1 cut(s) 118
RseI CAYNNNNRTG 1 cut(s) 65
SacI GAGCTC 1 cut(s) 324
SatI GCNGC 1 cut(s) 313
Sau3AI GATC 2 cut(s) 79, 118
SduI GDGCHC 1 cut(s) 324
SetI ASST 8 cut(s) 134, 182, 189, 219, 264, 324, 358, 463
SfaNI GCATC 1 cut(s) 409
SmiMI CAYNNNNRTG 1 cut(s) 65
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
SpeI ACTAGT 1 cut(s) 196
Sse9I AATT 2 cut(s) 63, 124
SspMI CTAG 1 cut(s) 197
SstI GAGCTC 1 cut(s) 324
StyI CCWWGG 1 cut(s) 375
TasI AATT 2 cut(s) 63, 124
TseI GCWGC 1 cut(s) 312
TspDTI ATGAA 2 cut(s) 6, 44
XapI RAATTY 1 cut(s) 124
XceI RCATGY 1 cut(s) 435
XspI CTAG 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.