Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003299

Physical Location & Seq

Genomic Coordinates Forward (+)

26240851 .. 26244676

Gene Structure 3826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G280800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGACACCAAAATCGGAGCACTTGACGTTTGCAAGCCCGCAAGCAACGAAGTGGGCAGCCTGCCAAACGGCACCGCTATGGCTATTCAGAATTCGGTCCCCTCCACCGTGATCAACTCGTCCGAGGCCACTCTAGGTCGCCACCTTGCTCGCCGACTCGTCCAAATCGGCGTCACCGACGTCTTCACTGTGCCCGGTGACTTTAACTTGACCCTCCTCGACCACCTCATCGCAGAGCCTGGGCTCACCAACATTGGCTGCTGCAACGAGCTCAACGCCGGCTACGCCGCTGATGGCTACGCTCGCTCTCGTGGCGTCGGCGCGTGTGTTGTTACTTTCACTGTGGGGGGGCTCAGTGTTCTCAATGCGATCGCTGGAGCCTACAGTGAGAACTTGCCTCTGATTTGTATAGTTGGAGGACCCAACTCTAATGACTATGGAACCAGCCGGATTCTTCACCACACTATCGGGTTGCCTGATTTTACCCAAGAGCTTAGGTGCTTTCAGACCGTCACTTGCTATCAGGCCGTCGTAAATAATCTCGAAGATGCACATGAATCGATCGATACGGCAATTTCAACTGCTTTGAAAGAAAGCAAGCCTGTTTACATCAGCATAAGCTGTAACTTGGCTGGGATTCCCCATCCTACGTTTATCCGGGAACCAGTTCCATTTTCATTGTCTCCCAGATTGAGCAATCAATGGGGCTTAGAGGCTGCAGTTGAGGCAGCTGCAGAGTTCTTGAACAAGGCAGTGAAACCAGTTATGGTAGGTGGGCCTAAACTGCGAGTTGCACATGCTGGTGATGCCTTTGTTGAACTAGCTGATGCCAGTGGTTATGCTCTGGCTGTGATGCCTTCAGCAAAGGGGCTTGTGCCTGAGCACCACCCTCATTTCATTGGGACATATTGGGGCGCCGTGAGCACTGCCTTTTGTGCTGAGATTGTGGAGTCTGCAGATGCATACTTGTTTGCTGGACCAATTTTCAATGACTACAGCTCTGTTGGGTACTCTCTCCTTCTCAAGAAAGAGAAGGCAATCATCGTGCAGCCCGATCGTGTGACAATAGCAAATGGCCCTTCATTTGGTTGTGTTCTCATGAAGGATTTCCTCAGAGCACTAGCAAAGAAGCTCAACCACAACAACACTGCTCATGAGAACTACCGCAGGATCTTTGTTCCTGATGGACACCCTCTAAAGTGTGCACCCAGAGAACCTTTGAGGGTTAATGTTCTGTTTCAACATGTCCAAAAGATGCTGTCAAGTGAAACAGCTGTGATTGCTGAGACAGGGGACTCATGGTTTAACTGCCAGAAACTGAGATTGCCGGCTGGTTGCGGGTACGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCAGTTGGAGCAACTCTTGGGTATGCTCAGGCTGTTCCTGAGAAGCGAGTGCTTGCTTTTATCGGTGATGGGAGCTTTCAGGTGACTGCCCAAGATGTGTCGACAATGATTCGAAATGGGCAGAGAACCATCATCTTCCTGATAAACAATGGTGGATACACCATTGAAGTAGAGATCCATGATGGACCATACAATGTGATCAAGAACTGGAACTACACAGGACTTGTTGATGCCATCCACAATGGGGAGGGCAAGTGCTGGACAACCAAGGTCCGTTATGAAGAGGAGCTGATTGAAGCAATTGAGACTGCAACTGGGGACAAGAAGGATAGCTTGTGCTTCATTGAGGTGATAGTTCACAAGGATGATACCAGCAAAGAGTTGCTTGAGTGGGGGTCTAGGGTTTCTGCTGCCAACAGCCGCCCACCCAATCCTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0008150 GO:0009628 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0034059 GO:0036293 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0070482

KEGG Pathways

Metabolic & Signaling

ko00010 ko01100 ko01110 ko01130 map00010 map01100 map01110 map01130

Pfam Domains

Protein Families

TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

606

Amino Acids

65.39

Weight (kDa)

5.74

Isoelectric Point (pI)

28.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33070 AT5G01320 AT5G01330
fragaria_vesca	FvH4_6g11100
malus_domestica	MD04G1159900.v1.1 MD04G1160100.v1.1 MD12G1172400.v1.1 MD12G1172500.v1.1 MD12G1173200.v1.1
prunus_persica	Prupe.6G280800_v2.0.a1 Prupe.6G280800_v2.0.a1
pyrus_communis	pycom04g14330 pycom04g14350 pycom12g16360 pycom12g16370 pycom17g25190
rosa_chinensis	RchiOBHm_Chr3g0462531 RchiOBHm_Chr7g0223061
rosa_laevigata	RLG00000024851 RLG00000024852
rosa_multiflora	Rmu_sc0003624.1_g000016 Rmu_sc0011346.1_g000001 Rmu_sc0025654.1_g000001
rosa_roxburghii	Rroxscaffold_5G00335980 Rroxscaffold_6G00417420 Rroxscaffold_6G00417440 Rroxscaffold_6G00417450
rosa_rugosa	Rorug03G0057300 Rorug03G0057400 Rorug03G0141600
rosa_samantha	Rh3AG115300 Rh3BG118700 Rh3CG122100 Rh3DG120800 Rh4AG098400
rosa_wichuraiana	Rw3G009760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	183
AccB1I	GGYRCC	2 cut(s)	71, 914
AccI	GTMKAC	1 cut(s)	1478
AccII	CGCG	1 cut(s)	323
AciI	CCGC	6 cut(s)	39, 75, 288, 1165, 1338, 1798
AclWI	GGATC	3 cut(s)	1178, 1372, 1546
AcsI	RAATTY	1 cut(s)	91
AcuI	CTGAAG	1 cut(s)	843
AcyI	GRCGYC	4 cut(s)	171, 180, 315, 915
AfaI	GTAC	2 cut(s)	1010, 1343
AfiI	CCNNNNNNNGG	2 cut(s)	1085, 1621
AflIII	ACRYGT	1 cut(s)	1243
AgsI	TTSAA	8 cut(s)	579, 589, 745, 818, 988, 1241, 1544, 1673
AjnI	CCWGG	1 cut(s)	238
Alw21I	GWGCWC	6 cut(s)	22, 273, 885, 926, 1120, 1207
Alw26I	GTCTC	3 cut(s)	687, 1280, 1676
Alw44I	GTGCAC	1 cut(s)	1203
AlwI	GGATC	3 cut(s)	1178, 1372, 1546
AlwNI	CAGNNNCTG	2 cut(s)	239, 1318
AoxI	GGCC	4 cut(s)	126, 525, 776, 1075
ApaLI	GTGCAC	1 cut(s)	1203
ApeKI	GCWGC	8 cut(s)	57, 258, 261, 716, 728, 731, 1048, 1787
ApoI	RAATTY	1 cut(s)	91
AsiSI	GCGATCGC	1 cut(s)	372
Asp700I	GAANNNNTTC	2 cut(s)	666, 1106
AspLEI	GCGC	2 cut(s)	323, 917
AspS9I	GGNCC	7 cut(s)	97, 419, 776, 977, 1076, 1562, 1648
AsuC2I	CCSGG	2 cut(s)	195, 659
AsuHPI	GGTGA	8 cut(s)	166, 209, 238, 449, 815, 1454, 1471, 1738
AsuII	TTCGAA	1 cut(s)	1489
AvaII	GGWCC	5 cut(s)	97, 419, 977, 1562, 1648
BaeGI	GKGCMC	2 cut(s)	195, 1207
BanI	GGYRCC	2 cut(s)	71, 914
BanII	GRGCYC	3 cut(s)	246, 273, 354
BauI	CACGAG	1 cut(s)	309
BbsI	GAAGAC	1 cut(s)	175
Bbv12I	GWGCWC	6 cut(s)	22, 273, 885, 926, 1120, 1207
BbvI	GCAGC	8 cut(s)	69, 245, 248, 703, 718, 740, 1060, 1774
BccI	CCATC	7 cut(s)	287, 651, 1178, 1439, 1514, 1553, 1619
BceAI	ACGGC	4 cut(s)	85, 512, 585, 902
BcgI	CGANNNNNNTGC	4 cut(s)	540, 574, 1037, 1071
BciT130I	CCWGG	1 cut(s)	240
BciVI	GTATCC	1 cut(s)	1526
BclI	TGATCA	2 cut(s)	111, 1575
BcnI	CCSGG	2 cut(s)	195, 659
BcoDI	GTCTC	3 cut(s)	687, 1280, 1676
BfaI	CTAG	4 cut(s)	134, 821, 1121, 1776
BfmI	CTRYAG	5 cut(s)	382, 717, 732, 954, 994
BfoI	RGCGCY	1 cut(s)	918
BfuI	GTATCC	1 cut(s)	1526
Bme1390I	CCNGG	3 cut(s)	195, 240, 659
Bme18I	GGWCC	5 cut(s)	97, 419, 977, 1562, 1648
BmgT120I	GGNCC	7 cut(s)	97, 419, 776, 977, 1076, 1562, 1648
BmiI	GGNNCC	7 cut(s)	73, 99, 379, 421, 442, 663, 916
BmrFI	CCNGG	3 cut(s)	195, 240, 659
BmrI	ACTGGG	1 cut(s)	1701
BmsI	GCATC	7 cut(s)	538, 796, 817, 843, 949, 1245, 1597
BmuI	ACTGGG	1 cut(s)	1701
BpiI	GAAGAC	1 cut(s)	175
BpmI	CTGGAG	1 cut(s)	396
Bpu10I	CCTNAGC	3 cut(s)	494, 879, 1404
Bpu14I	TTCGAA	1 cut(s)	1489
BpuEI	CTTGAG	2 cut(s)	1007, 1784
BpuMI	CCSGG	2 cut(s)	195, 659
Bsa29I	ATCGAT	2 cut(s)	560, 564
BsaHI	GRCGYC	4 cut(s)	171, 180, 315, 915
BsaJI	CCNNGG	3 cut(s)	123, 239, 1644
BsaXI	ACNNNNNCTCC	2 cut(s)	1616, 1646
Bsc4I	CCNNNNNNNGG	2 cut(s)	1085, 1621
Bse118I	RCCGGY	2 cut(s)	278, 1327
Bse1I	ACTGG	5 cut(s)	665, 761, 831, 1589, 1696
BseBI	CCWGG	1 cut(s)	240
BseCI	ATCGAT	2 cut(s)	560, 564
BseDI	CCNNGG	3 cut(s)	123, 239, 1644
BseGI	GGATG	3 cut(s)	643, 1611, 1747
BseLI	CCNNNNNNNGG	2 cut(s)	1085, 1621
BseMII	CTCAG	8 cut(s)	367, 870, 930, 1126, 1275, 1310, 1407, 1418
BseNI	ACTGG	5 cut(s)	665, 761, 831, 1589, 1696
BseRI	GAGGAG	2 cut(s)	206, 1676
BseSI	GKGCMC	2 cut(s)	195, 1207
BseXI	GCAGC	8 cut(s)	69, 245, 248, 703, 718, 740, 1060, 1774
BseYI	CCCAGC	1 cut(s)	632
BsgI	GTGCAG	1 cut(s)	1067
Bsh1236I	CGCG	1 cut(s)	323
Bsh1285I	CGRYCG	3 cut(s)	372, 564, 1057
BshFI	GGCC	4 cut(s)	128, 527, 778, 1077
BshNI	GGYRCC	2 cut(s)	71, 914
BshVI	ATCGAT	2 cut(s)	560, 564
BsiEI	CGRYCG	3 cut(s)	372, 564, 1057
BsiHKAI	GWGCWC	6 cut(s)	22, 273, 885, 926, 1120, 1207
BsiSI	CCGG	5 cut(s)	195, 279, 448, 658, 1328
BslFI	GGGAC	4 cut(s)	83, 916, 1307, 1709
BslI	CCNNNNNNNGG	2 cut(s)	1085, 1621
BsmAI	GTCTC	3 cut(s)	687, 1280, 1676
BsmFI	GGGAC	4 cut(s)	83, 916, 1307, 1709
BsnI	GGCC	4 cut(s)	128, 527, 778, 1077
Bsp119I	TTCGAA	1 cut(s)	1489
Bsp1286I	GDGCHC	9 cut(s)	22, 195, 246, 273, 354, 885, 926, 1120, 1207
Bsp143I	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
BspACI	CCGC	6 cut(s)	39, 75, 288, 1165, 1338, 1798
BspANI	GGCC	4 cut(s)	128, 527, 778, 1077
BspCNI	CTCAG	8 cut(s)	366, 871, 931, 1125, 1276, 1311, 1408, 1417
BspDI	ATCGAT	2 cut(s)	560, 564
BspFNI	CGCG	1 cut(s)	323
BspHI	TCATGA	2 cut(s)	1098, 1153
BspLI	GGNNCC	7 cut(s)	73, 99, 379, 421, 442, 663, 916
BspMAI	CTGCAG	3 cut(s)	721, 736, 958
BspPI	GGATC	3 cut(s)	1178, 1372, 1546
BspT104I	TTCGAA	1 cut(s)	1489
BspT107I	GGYRCC	2 cut(s)	71, 914
BsrFI	RCCGGY	2 cut(s)	278, 1327
BsrI	ACTGG	5 cut(s)	665, 761, 831, 1589, 1696
BssAI	RCCGGY	2 cut(s)	278, 1327
BssECI	CCNNGG	3 cut(s)	123, 239, 1644
BssMI	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
BssNI	GRCGYC	4 cut(s)	171, 180, 315, 915
BssSI	CACGAG	1 cut(s)	309
BssT1I	CCWWGG	1 cut(s)	1644
Bst2BI	CACGAG	1 cut(s)	309
Bst2UI	CCWGG	1 cut(s)	240
Bst4CI	ACNGT	5 cut(s)	109, 190, 343, 386, 511
Bst6I	CTCTTC	1 cut(s)	1653
BstACI	GRCGYC	4 cut(s)	171, 180, 315, 915
BstBI	TTCGAA	1 cut(s)	1489
BstF5I	GGATG	3 cut(s)	643, 1611, 1747
BstFNI	CGCG	1 cut(s)	323
BstH2I	RGCGCY	1 cut(s)	918
BstHHI	GCGC	2 cut(s)	323, 917
BstKTI	GATC	8 cut(s)	114, 372, 564, 1057, 1173, 1367, 1554, 1578
BstMAI	GTCTC	3 cut(s)	687, 1280, 1676
BstMBI	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
BstMCI	CGRYCG	3 cut(s)	372, 564, 1057
BstMWI	GCNNNNNNNGC	9 cut(s)	284, 303, 312, 725, 784, 806, 921, 935, 1280
BstNI	CCWGG	1 cut(s)	240
BstNSI	RCATGY	2 cut(s)	800, 1247
BstSCI	CCNGG	3 cut(s)	193, 238, 657
BstSFI	CTRYAG	5 cut(s)	382, 717, 732, 954, 994
BstSLI	GKGCMC	2 cut(s)	195, 1207
BstUI	CGCG	1 cut(s)	323
BstV1I	GCAGC	8 cut(s)	69, 245, 248, 703, 718, 740, 1060, 1774
BstV2I	GAAGAC	1 cut(s)	175
BstX2I	RGATCY	2 cut(s)	1170, 1551
BstYI	RGATCY	2 cut(s)	1170, 1551
Bsu15I	ATCGAT	2 cut(s)	560, 564
BsuI	GTATCC	1 cut(s)	1526
BsuRI	GGCC	4 cut(s)	128, 527, 778, 1077
BsuTUI	ATCGAT	2 cut(s)	560, 564
BtgZI	GCGATG	1 cut(s)	214
BtsCI	GGATG	3 cut(s)	643, 1611, 1747
BtsI	GCAGTG	3 cut(s)	759, 924, 1146
BtsIMutI	CAGTG	8 cut(s)	186, 339, 361, 391, 759, 838, 924, 1146
CaiI	CAGNNNCTG	2 cut(s)	239, 1318
CciI	TCATGA	2 cut(s)	1098, 1153
CfoI	GCGC	2 cut(s)	323, 917
Cfr10I	RCCGGY	2 cut(s)	278, 1327
Cfr13I	GGNCC	7 cut(s)	97, 419, 776, 977, 1076, 1562, 1648
ClaI	ATCGAT	2 cut(s)	560, 564
CseI	GACGC	2 cut(s)	160, 304
Csp6I	GTAC	2 cut(s)	1009, 1342
CviAII	CATG	7 cut(s)	554, 797, 1099, 1154, 1244, 1299, 1556
CviQI	GTAC	2 cut(s)	1009, 1342
DinI	GGCGCC	1 cut(s)	916
DpnI	GATC	8 cut(s)	113, 371, 563, 1056, 1172, 1366, 1553, 1577
DpnII	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
Eam1104I	CTCTTC	1 cut(s)	1653
EarI	CTCTTC	1 cut(s)	1653
Ecl136II	GAGCTC	1 cut(s)	271
Eco130I	CCWWGG	1 cut(s)	1644
Eco24I	GRGCYC	3 cut(s)	246, 273, 354
Eco47I	GGWCC	5 cut(s)	97, 419, 977, 1562, 1648
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	1 cut(s)	843
EcoICRI	GAGCTC	1 cut(s)	271
EcoO109I	RGGNCCY	1 cut(s)	419
EcoRI	GAATTC	1 cut(s)	91
EcoRII	CCWGG	1 cut(s)	238
EcoT14I	CCWWGG	1 cut(s)	1644
EcoT22I	ATGCAT	1 cut(s)	964
EcoT38I	GRGCYC	3 cut(s)	246, 273, 354
EgeI	GGCGCC	1 cut(s)	916
EheI	GGCGCC	1 cut(s)	916
ErhI	CCWWGG	1 cut(s)	1644
FaeI	CATG	7 cut(s)	557, 800, 1102, 1157, 1247, 1302, 1559
FalI	AAGNNNNNCTT	4 cut(s)	1694, 1726, 1746, 1778
FaqI	GGGAC	4 cut(s)	83, 916, 1307, 1709
FatI	CATG	7 cut(s)	553, 796, 1098, 1153, 1243, 1298, 1555
FauI	CCCGC	2 cut(s)	46, 1331
FbaI	TGATCA	2 cut(s)	111, 1575
FblI	GTMKAC	1 cut(s)	1478
FokI	GGATG	3 cut(s)	630, 1598, 1754
FriOI	GRGCYC	3 cut(s)	246, 273, 354
FspBI	CTAG	4 cut(s)	134, 821, 1121, 1776
GlaI	GCGC	2 cut(s)	322, 916
GsaI	CCCAGC	1 cut(s)	636
GsuI	CTGGAG	1 cut(s)	396
HaeII	RGCGCY	1 cut(s)	918
HaeIII	GGCC	4 cut(s)	128, 527, 778, 1077
HapII	CCGG	5 cut(s)	195, 279, 448, 658, 1328
HgaI	GACGC	2 cut(s)	160, 304
HhaI	GCGC	2 cut(s)	323, 917
Hin1I	GRCGYC	4 cut(s)	171, 180, 315, 915
Hin1II	CATG	7 cut(s)	557, 800, 1102, 1157, 1247, 1302, 1559
Hin6I	GCGC	2 cut(s)	321, 915
HinP1I	GCGC	2 cut(s)	321, 915
HincII	GTYRAC	1 cut(s)	1479
HindII	GTYRAC	1 cut(s)	1479
HinfI	GANTC	7 cut(s)	156, 451, 557, 637, 950, 1295, 1486
HpaII	CCGG	5 cut(s)	195, 279, 448, 658, 1328
HphI	GGTGA	8 cut(s)	166, 209, 238, 449, 815, 1454, 1471, 1738
Hpy166II	GTNNAC	4 cut(s)	607, 1205, 1479, 1735
Hpy188I	TCNGA	6 cut(s)	17, 90, 124, 402, 507, 1115
Hpy188III	TCNNGA	9 cut(s)	542, 742, 1024, 1099, 1154, 1181, 1415, 1516, 1579
Hpy8I	GTNNAC	4 cut(s)	607, 1205, 1479, 1735
Hpy99I	CGWCG	3 cut(s)	182, 320, 533
HpyAV	CCTTC	6 cut(s)	867, 1027, 1028, 1089, 1096, 1696
HpyCH4III	ACNGT	5 cut(s)	109, 190, 343, 386, 511
HpyCH4IV	ACGT	3 cut(s)	27, 180, 650
HpyF10VI	GCNNNNNNNGC	9 cut(s)	284, 303, 312, 725, 784, 806, 921, 935, 1280
HpySE526I	ACGT	3 cut(s)	27, 180, 650
Hsp92I	GRCGYC	4 cut(s)	171, 180, 315, 915
Hsp92II	CATG	7 cut(s)	557, 800, 1102, 1157, 1247, 1302, 1559
HspAI	GCGC	2 cut(s)	321, 915
KasI	GGCGCC	1 cut(s)	914
KroI	GCCGGC	2 cut(s)	278, 1327
KroNI	GCCGGC	2 cut(s)	280, 1329
Ksp22I	TGATCA	2 cut(s)	111, 1575
Kzo9I	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
LmnI	GCTCC	5 cut(s)	17, 377, 1385, 1449, 1663
Lsp1109I	GCAGC	8 cut(s)	69, 245, 248, 703, 718, 740, 1060, 1774
LweI	GCATC	7 cut(s)	538, 796, 817, 843, 949, 1245, 1597
MaeI	CTAG	4 cut(s)	134, 821, 1121, 1776
MaeII	ACGT	3 cut(s)	27, 180, 650
MaeIII	GTNAC	7 cut(s)	172, 197, 331, 511, 623, 1060, 1459
MalI	GATC	8 cut(s)	113, 371, 563, 1056, 1172, 1366, 1553, 1577
MboI	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
MboII	GAAGA	5 cut(s)	175, 446, 557, 1504, 1670
MfeI	CAATTG	2 cut(s)	1368, 1677
MflI	RGATCY	2 cut(s)	1170, 1551
MhlI	GDGCHC	9 cut(s)	22, 195, 246, 273, 354, 885, 926, 1120, 1207
MluCI	AATT	5 cut(s)	91, 573, 981, 1368, 1677
Mly113I	GGCGCC	1 cut(s)	915
MlyI	GAGTC	3 cut(s)	150, 959, 1289
MmeI	TCCRAC	2 cut(s)	394, 1363
Mph1103I	ATGCAT	1 cut(s)	964
MroNI	GCCGGC	2 cut(s)	278, 1327
MroXI	GAANNNNTTC	2 cut(s)	666, 1106
MseI	TTAA	3 cut(s)	204, 1227, 1305
MslI	CAYNNNNRTG	4 cut(s)	77, 801, 1724, 1740
MspA1I	CMGCKG	3 cut(s)	290, 731, 1274
MspI	CCGG	5 cut(s)	195, 279, 448, 658, 1328
MspR9I	CCNGG	3 cut(s)	195, 240, 659
MunI	CAATTG	2 cut(s)	1368, 1677
MvaI	CCWGG	1 cut(s)	240
MvnI	CGCG	1 cut(s)	323
MwoI	GCNNNNNNNGC	9 cut(s)	284, 303, 312, 725, 784, 806, 921, 935, 1280
NaeI	GCCGGC	2 cut(s)	280, 1329
NarI	GGCGCC	1 cut(s)	915
NciI	CCSGG	2 cut(s)	195, 659
NdeII	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
NgoMIV	GCCGGC	2 cut(s)	278, 1327
NlaIII	CATG	7 cut(s)	557, 800, 1102, 1157, 1247, 1302, 1559
NlaIV	GGNNCC	7 cut(s)	73, 99, 379, 421, 442, 663, 916
NmuCI	GTSAC	5 cut(s)	172, 197, 511, 1060, 1459
NsiI	ATGCAT	1 cut(s)	964
NspI	RCATGY	2 cut(s)	800, 1247
NspV	TTCGAA	1 cut(s)	1489
PagI	TCATGA	2 cut(s)	1098, 1153
PciI	ACATGT	1 cut(s)	1243
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 1050
PdiI	GCCGGC	2 cut(s)	280, 1329
PdmI	GAANNNNTTC	2 cut(s)	666, 1106
PfeI	GAWTC	4 cut(s)	451, 557, 637, 1486
PfoI	TCCNGGA	1 cut(s)	657
Ple19I	CGATCG	3 cut(s)	372, 564, 1057
PleI	GAGTC	3 cut(s)	150, 958, 1289
PluTI	GGCGCC	1 cut(s)	918
PpsI	GAGTC	3 cut(s)	150, 958, 1289
PpuMI	RGGWCCY	1 cut(s)	419
PscI	ACATGT	1 cut(s)	1243
Psp124BI	GAGCTC	1 cut(s)	273
Psp5II	RGGWCCY	1 cut(s)	419
Psp6I	CCWGG	1 cut(s)	238
PspFI	CCCAGC	1 cut(s)	632
PspGI	CCWGG	1 cut(s)	238
PspN4I	GGNNCC	7 cut(s)	73, 99, 379, 421, 442, 663, 916
PspPI	GGNCC	7 cut(s)	97, 419, 776, 977, 1076, 1562, 1648
PspPPI	RGGWCCY	1 cut(s)	419
PsrI	GAACNNNNNNTAC	2 cut(s)	1574, 1606
PstI	CTGCAG	3 cut(s)	721, 736, 958
PstNI	CAGNNNCTG	2 cut(s)	239, 1318
PsuI	RGATCY	2 cut(s)	1170, 1551
PvuI	CGATCG	3 cut(s)	372, 564, 1057
PvuII	CAGCTG	2 cut(s)	731, 1274
RgaI	GCGATCGC	1 cut(s)	372
RsaI	GTAC	2 cut(s)	1010, 1343
RsaNI	GTAC	2 cut(s)	1009, 1342
RseI	CAYNNNNRTG	4 cut(s)	77, 801, 1724, 1740
SacI	GAGCTC	1 cut(s)	273
SalI	GTCGAC	1 cut(s)	1477
SaqAI	TTAA	3 cut(s)	204, 1227, 1305
Sau3AI	GATC	8 cut(s)	111, 369, 561, 1054, 1170, 1364, 1551, 1575
Sau96I	GGNCC	7 cut(s)	97, 419, 776, 977, 1076, 1562, 1648
SchI	GAGTC	3 cut(s)	150, 959, 1289
ScrFI	CCNGG	3 cut(s)	195, 240, 659
SduI	GDGCHC	9 cut(s)	22, 195, 246, 273, 354, 885, 926, 1120, 1207
SfaAI	GCGATCGC	1 cut(s)	372
SfaNI	GCATC	7 cut(s)	538, 796, 817, 843, 949, 1245, 1597
SfcI	CTRYAG	5 cut(s)	382, 717, 732, 954, 994
SfoI	GGCGCC	1 cut(s)	916
SfuI	TTCGAA	1 cut(s)	1489
SgfI	GCGATCGC	1 cut(s)	372
SinI	GGWCC	5 cut(s)	97, 419, 977, 1562, 1648
SmiMI	CAYNNNNRTG	4 cut(s)	77, 801, 1724, 1740
SmlI	CTYRAG	2 cut(s)	1022, 1763
SmoI	CTYRAG	2 cut(s)	1022, 1763
Sse9I	AATT	5 cut(s)	91, 573, 981, 1368, 1677
SsiI	CCGC	6 cut(s)	39, 75, 288, 1165, 1338, 1798
SspDI	GGCGCC	1 cut(s)	914
SspMI	CTAG	4 cut(s)	134, 821, 1121, 1776
SstI	GAGCTC	1 cut(s)	273
StyD4I	CCNGG	3 cut(s)	193, 238, 657
StyI	CCWWGG	1 cut(s)	1644
TaaI	ACNGT	5 cut(s)	109, 190, 343, 386, 511
TaiI	ACGT	3 cut(s)	30, 183, 653
TaqI	TCGA	6 cut(s)	219, 543, 560, 564, 1478, 1489
TaqII	GACCGA	1 cut(s)	85
TasI	AATT	5 cut(s)	91, 573, 981, 1368, 1677
TauI	GCSGC	2 cut(s)	290, 1800
TfiI	GAWTC	4 cut(s)	451, 557, 637, 1486
Tru1I	TTAA	3 cut(s)	204, 1227, 1305
Tru9I	TTAA	3 cut(s)	204, 1227, 1305
TscAI	CASTG	8 cut(s)	193, 346, 361, 391, 759, 838, 931, 1153
TseFI	GTSAC	5 cut(s)	172, 197, 511, 1060, 1459
TseI	GCWGC	8 cut(s)	57, 258, 261, 716, 728, 731, 1048, 1787
Tsp45I	GTSAC	5 cut(s)	172, 197, 511, 1060, 1459
TspDTI	ATGAA	7 cut(s)	570, 666, 886, 1071, 1115, 1671, 1708
TspGWI	ACGGA	1 cut(s)	1640
TspRI	CASTG	8 cut(s)	193, 346, 361, 391, 759, 838, 931, 1153
VneI	GTGCAC	1 cut(s)	1203
VpaK11BI	GGWCC	5 cut(s)	97, 419, 977, 1562, 1648
XapI	RAATTY	1 cut(s)	91
XceI	RCATGY	2 cut(s)	800, 1247
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1358
XmiI	GTMKAC	1 cut(s)	1478
XmnI	GAANNNNTTC	2 cut(s)	666, 1106
XspI	CTAG	4 cut(s)	134, 821, 1121, 1776
ZraI	GACGTC	1 cut(s)	181
Zsp2I	ATGCAT	1 cut(s)	964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.