Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002314

Physical Location & Seq

Genomic Coordinates Forward (+)

9450130 .. 9453081

Gene Structure 2952 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G055700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGGACGCTATCAGCGCCATCATCAGTGGAGAAAAGGTGAAAAGCATACAGAAGATGATGAAGAGTCTCAGACCTTTCTAATGGAGTTTGCAAACTCTGGTTATTACAAAAGAACAAGTCCCAAGCTTCTCTATCTCCTCTTCCTCTCTTTTCTCTCTTGCAGCTTCATATTGGCCCCTCATCTTTTTAGCACCAACACCACCTTCTCTCTCTTATATTCGACAATGGTAGAAAATGAAGGCCTTGCTGCTGAAATGGACGTAAACATTCCCTTGTGTTCTTCAATCGCTAATGGAACTATATGTTGTGATAGAAGCAGTATTCGTTCAGATATTTGTGTCATGAAAGGGGATGTGAGAACACACTCTGCTTCCTCTTCTATATTTCTCTACAGATCTAAGGACGGAAACAGCTTGAAAAATTATGTTGCTGGTGTTGTTGAGGAAACTGAGGAACTTGAGCACGAAAAGGTCAAACCGTATACAAGGAAATGGGAAACAAGTGTCATGGACACCATTGATGAATTGCAGCTCGTTGCAAAGAAAGACACTCTAGGTATGCACCATCAGTGTGATGTCCAACATGATGTACCAGCAGTGTTTTTCTCGACTGGGGGCTATACTGGTAATGTTTATCATGAATTCAATGATGGGATTATGCCATTATACATTACTTCCCAGCATTTCAACAAGAAGGTTATATTTGTCATGCTTGATTACCATACATGGTGGATCACGAAATATGGAGACATTCTTTCACAACTGTCAGATTATCCACCGATAGATTTTAGCGGAGACAAGAGAACTCACTGCTTCCCTGAGGTCACTGTTGGCCTGAGAATTCACGACGAGCTCACTGTGGATTCTTCACTGATGGAGGGAAATATGGGCATTGTTGACTTTCGAAATCTTCTAGACCGAGCTTATTGGCCTCGAATCCGAAGTCTAATTCAAGATGAGGAACGAGAAGCGCAGGAGAAGCTTTCTGCATCTTTGACATCTGAAAGCCCTTTAGAAATAGAGAATGAAGTGCAAGAAGATCAAGTGAGGAAGCCTAAACTGGTAATCATATCTCGAAATGGATCAAGAGCCATAACTAATGAGAATTTATTGGTGAAAATGGCTGAGGAAATCGGGTTTGAAGTGAATGTTTTGAGACCCGACCCCACGACCGAGTTGGCAAAGATTTATCGGGCCCTTAATGCTAGTGATGTGATGATTGGGGTTCATGGTGCTGCCATGACTCATTTTCTATTCATGAAGCCTGGCTCTGTTTTTATCCAAGTTGTTCCCCTTGGAACTGTGTGGGCAGCAGAGGAATATTATGGGGAACCTGCAAGGAAGCTTGGCTTAAAATACATTGGCTACCAAATTCTTACCAGAGAGAGTTCCTTATATGACAAGTATGATAAAGATGATCCTGTTCTTAGAGATCCAAAGAGTGTAACCACAATGGGTTGGGAGTACACAAAGAAGATCTATCTTGATGGTCAGACTGTGAGATTAGATCTTGGAAGATTTCGCAAGCGATTGGTTCGTGCTTACTACCATAGACTGAACAAGCATCCCCATCTTCATTCTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

DUF563

Protein Analysis

529

Amino Acids

60.75

Weight (kDa)

6.01

Isoelectric Point (pI)

34.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41640 AT2G41640 AT2G41640 AT3G57380 AT3G57380 AT3G57380
fragaria_vesca	FvH4_6g23970 FvH4_6g24320
malus_domestica	MD00G1122300.v1.1 MD12G1075400.v1.1 MD12G1075900.v1.1 MD12G1211600.v1.1 MD14G1073900.v1.1 MD14G1074300.v1.1
prunus_persica	Prupe.7G055600_v2.0.a1 Prupe.7G055700_v2.0.a1
pyrus_communis	pycom12g06490 pycom12g06530 pycom14g06320
rosa_chinensis	RchiOBHm_Chr3g0483201 RchiOBHm_Chr3g0483241
rosa_laevigata	RLG00000023295 RLG00000023297 RLG00000023299
rosa_multiflora	Rmu_sc0000058.1_g000002 Rmu_sc0004790.1_g000011 Rmu_sc0007550.1_g000006 Rmu_sc0011066.1_g000001 Rmu_sc0026377.1_g000002
rosa_roxburghii	Rroxscaffold_6G00398530 Rroxscaffold_6G00398550
rosa_rugosa	Rorug03G0204900 Rorug03G0204900
rosa_samantha	Rh3AG253100 Rh3AG253300 Rh3BG290300 Rh3CG287100 Rh3CG287200 Rh3DG282700 Rh3DG282900
rosa_wichuraiana	Rw3G022900 Rw3G022910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1342
AccI	GTMKAC	1 cut(s)	482
AciI	CCGC	1 cut(s)	792
AclWI	GGATC	4 cut(s)	740, 1090, 1412, 1427
AcsI	RAATTY	4 cut(s)	641, 840, 1105, 1371
AfaI	GTAC	2 cut(s)	591, 1466
AgsI	TTSAA	6 cut(s)	285, 418, 646, 688, 953, 1142
AjnI	CCWGG	1 cut(s)	1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	188, 220
AluBI	AGCT	8 cut(s)	127, 165, 414, 532, 853, 923, 982, 1345
AluI	AGCT	8 cut(s)	127, 165, 414, 532, 853, 923, 982, 1345
Alw21I	GWGCWC	2 cut(s)	465, 855
Alw26I	GTCTC	4 cut(s)	72, 741, 789, 1150
AlwI	GGATC	4 cut(s)	740, 1090, 1412, 1427
AoxI	GGCC	5 cut(s)	174, 241, 832, 929, 1194
ApaI	GGGCCC	1 cut(s)	1198
ApeKI	GCWGC	5 cut(s)	162, 248, 529, 1235, 1310
ApoI	RAATTY	4 cut(s)	641, 840, 1105, 1371
ArsI	GACNNNNNNTTYG	2 cut(s)	928, 960
AspLEI	GCGC	2 cut(s)	18, 973
AspS9I	GGNCC	3 cut(s)	175, 1194, 1195
AsuHPI	GGTGA	2 cut(s)	50, 1126
AsuII	TTCGAA	1 cut(s)	904
AxyI	CCTNAGG	1 cut(s)	819
BaeGI	GKGCMC	1 cut(s)	1198
BanII	GRGCYC	2 cut(s)	855, 1198
Bbv12I	GWGCWC	2 cut(s)	465, 855
BbvCI	CCTCAGC	1 cut(s)	1125
BbvI	GCAGC	5 cut(s)	174, 235, 541, 1222, 1322
BccI	CCATC	6 cut(s)	27, 573, 644, 868, 1481, 1578
BciT130I	CCWGG	1 cut(s)	1266
BcoDI	GTCTC	4 cut(s)	72, 741, 789, 1150
BfaI	CTAG	3 cut(s)	554, 914, 1206
BfmI	CTRYAG	1 cut(s)	391
BfoI	RGCGCY	1 cut(s)	19
BfuAI	ACCTGC	1 cut(s)	1342
BglII	AGATCT	3 cut(s)	395, 1476, 1507
BisI	GCNGC	5 cut(s)	163, 249, 530, 1236, 1311
BlsI	GCNGC	5 cut(s)	164, 250, 531, 1237, 1312
Bme1390I	CCNGG	1 cut(s)	1266
BmgT120I	GGNCC	3 cut(s)	175, 1194, 1195
BmiI	GGNNCC	3 cut(s)	177, 1196, 1332
BmrFI	CCNGG	1 cut(s)	1266
BmrI	ACTGGG	1 cut(s)	621
BmsI	GCATC	2 cut(s)	998, 1573
BmuI	ACTGGG	1 cut(s)	621
Bpu10I	CCTNAGC	1 cut(s)	1125
Bpu14I	TTCGAA	1 cut(s)	904
BpuEI	CTTGAG	1 cut(s)	479
BsaI	GGTCTC	1 cut(s)	1150
BsaJI	CCNNGG	1 cut(s)	1294
BsaXI	ACNNNNNCTCC	2 cut(s)	22, 52
Bse1I	ACTGG	3 cut(s)	616, 628, 1065
Bse21I	CCTNAGG	1 cut(s)	819
BseBI	CCWGG	1 cut(s)	1266
BseDI	CCNNGG	1 cut(s)	1294
BseGI	GGATG	2 cut(s)	358, 1564
BseMII	CTCAG	5 cut(s)	83, 441, 810, 827, 1116
BseNI	ACTGG	3 cut(s)	616, 628, 1065
BseRI	GAGGAG	1 cut(s)	128
BseSI	GKGCMC	1 cut(s)	1198
BseXI	GCAGC	5 cut(s)	174, 235, 541, 1222, 1322
BseYI	CCCAGC	1 cut(s)	678
Bsh1285I	CGRYCG	1 cut(s)	1173
BshFI	GGCC	5 cut(s)	176, 243, 834, 931, 1196
BsiEI	CGRYCG	1 cut(s)	1173
BsiHKAI	GWGCWC	2 cut(s)	465, 855
BslFI	GGGAC	2 cut(s)	18, 105
BsmAI	GTCTC	4 cut(s)	72, 741, 789, 1150
BsmFI	GGGAC	2 cut(s)	18, 105
BsnI	GGCC	5 cut(s)	176, 243, 834, 931, 1196
Bso31I	GGTCTC	1 cut(s)	1150
Bsp119I	TTCGAA	1 cut(s)	904
Bsp120I	GGGCCC	1 cut(s)	1194
Bsp1286I	GDGCHC	3 cut(s)	465, 855, 1198
Bsp143I	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
BspACI	CCGC	1 cut(s)	792
BspANI	GGCC	5 cut(s)	176, 243, 834, 931, 1196
BspCNI	CTCAG	5 cut(s)	82, 442, 811, 828, 1117
BspHI	TCATGA	3 cut(s)	342, 637, 1257
BspLI	GGNNCC	3 cut(s)	177, 1196, 1332
BspMI	ACCTGC	1 cut(s)	1342
BspPI	GGATC	4 cut(s)	740, 1090, 1412, 1427
BspT104I	TTCGAA	1 cut(s)	904
BspTNI	GGTCTC	1 cut(s)	1150
BsrI	ACTGG	3 cut(s)	616, 628, 1065
BssECI	CCNNGG	1 cut(s)	1294
BssMI	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
BssNAI	GTATAC	1 cut(s)	483
BssT1I	CCWWGG	1 cut(s)	1294
Bst1107I	GTATAC	1 cut(s)	483
Bst2UI	CCWGG	1 cut(s)	1266
Bst4CI	ACNGT	6 cut(s)	480, 765, 829, 859, 1303, 1498
Bst6I	CTCTTC	3 cut(s)	57, 146, 382
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	1 cut(s)	1526
BstDEI	CTNAG	8 cut(s)	69, 399, 450, 819, 836, 1125, 1427, 1581
BstF5I	GGATG	2 cut(s)	358, 1564
BstH2I	RGCGCY	1 cut(s)	19
BstHHI	GCGC	2 cut(s)	18, 973
BstKTI	GATC	8 cut(s)	398, 735, 1042, 1085, 1420, 1435, 1479, 1510
BstMAI	GTCTC	4 cut(s)	72, 741, 789, 1150
BstMBI	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
BstMCI	CGRYCG	1 cut(s)	1173
BstMWI	GCNNNNNNNGC	3 cut(s)	15, 979, 1202
BstNI	CCWGG	1 cut(s)	1266
BstSCI	CCNGG	1 cut(s)	1264
BstSFI	CTRYAG	1 cut(s)	391
BstSLI	GKGCMC	1 cut(s)	1198
BstV1I	GCAGC	5 cut(s)	174, 235, 541, 1222, 1322
BstX2I	RGATCY	4 cut(s)	395, 1432, 1476, 1507
BstYI	RGATCY	4 cut(s)	395, 1432, 1476, 1507
BstZ17I	GTATAC	1 cut(s)	483
Bsu36I	CCTNAGG	1 cut(s)	819
BsuRI	GGCC	5 cut(s)	176, 243, 834, 931, 1196
BtsCI	GGATG	2 cut(s)	358, 1564
BtsI	GCAGTG	2 cut(s)	603, 808
BtsIMutI	CAGTG	7 cut(s)	32, 575, 603, 808, 825, 855, 869
BveI	ACCTGC	1 cut(s)	1342
Cac8I	GCNNGC	1 cut(s)	1526
CciI	TCATGA	3 cut(s)	342, 637, 1257
CfoI	GCGC	2 cut(s)	18, 973
Cfr13I	GGNCC	3 cut(s)	175, 1194, 1195
CseI	GACGC	1 cut(s)	15
Csp6I	GTAC	2 cut(s)	590, 1465
CviAII	CATG	9 cut(s)	343, 508, 584, 638, 709, 726, 1229, 1240, 1258
CviQI	GTAC	2 cut(s)	590, 1465
DdeI	CTNAG	8 cut(s)	69, 399, 450, 819, 836, 1125, 1427, 1581
DpnI	GATC	8 cut(s)	397, 734, 1041, 1084, 1419, 1434, 1478, 1509
DpnII	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
Eam1104I	CTCTTC	3 cut(s)	57, 146, 382
EarI	CTCTTC	3 cut(s)	57, 146, 382
Ecl136II	GAGCTC	1 cut(s)	853
Eco130I	CCWWGG	1 cut(s)	1294
Eco147I	AGGCCT	1 cut(s)	243
Eco24I	GRGCYC	2 cut(s)	855, 1198
Eco31I	GGTCTC	1 cut(s)	1150
Eco53kI	GAGCTC	1 cut(s)	853
Eco81I	CCTNAGG	1 cut(s)	819
EcoICRI	GAGCTC	1 cut(s)	853
EcoO109I	RGGNCCY	1 cut(s)	1195
EcoRI	GAATTC	2 cut(s)	641, 840
EcoRII	CCWGG	1 cut(s)	1264
EcoT14I	CCWWGG	1 cut(s)	1294
EcoT38I	GRGCYC	2 cut(s)	855, 1198
ErhI	CCWWGG	1 cut(s)	1294
FaeI	CATG	9 cut(s)	346, 511, 587, 641, 712, 729, 1232, 1243, 1261
FalI	AAGNNNNNCTT	2 cut(s)	1334, 1366
FaqI	GGGAC	2 cut(s)	18, 105
FatI	CATG	9 cut(s)	342, 507, 583, 637, 708, 725, 1228, 1239, 1257
FblI	GTMKAC	1 cut(s)	482
Fnu4HI	GCNGC	5 cut(s)	163, 249, 530, 1236, 1311
FokI	GGATG	2 cut(s)	365, 1551
FriOI	GRGCYC	2 cut(s)	855, 1198
Fsp4HI	GCNGC	5 cut(s)	163, 249, 530, 1236, 1311
FspBI	CTAG	3 cut(s)	554, 914, 1206
GlaI	GCGC	2 cut(s)	17, 972
GluI	GCNGC	5 cut(s)	163, 249, 530, 1236, 1311
GsaI	CCCAGC	1 cut(s)	682
HaeII	RGCGCY	1 cut(s)	19
HaeIII	GGCC	5 cut(s)	176, 243, 834, 931, 1196
HgaI	GACGC	1 cut(s)	15
HhaI	GCGC	2 cut(s)	18, 973
Hin1II	CATG	9 cut(s)	346, 511, 587, 641, 712, 729, 1232, 1243, 1261
Hin6I	GCGC	2 cut(s)	16, 971
HinP1I	GCGC	2 cut(s)	16, 971
HincII	GTYRAC	1 cut(s)	898
HindII	GTYRAC	1 cut(s)	898
HindIII	AAGCTT	3 cut(s)	125, 980, 1343
HinfI	GANTC	4 cut(s)	65, 863, 936, 1243
HphI	GGTGA	2 cut(s)	50, 1126
Hpy166II	GTNNAC	4 cut(s)	265, 483, 898, 1467
Hpy188I	TCNGA	6 cut(s)	72, 331, 769, 941, 1003, 1494
Hpy8I	GTNNAC	4 cut(s)	265, 483, 898, 1467
Hpy99I	CGWCG	1 cut(s)	851
HpyAV	CCTTC	3 cut(s)	214, 233, 688
HpyCH4III	ACNGT	6 cut(s)	480, 765, 829, 859, 1303, 1498
HpyCH4IV	ACGT	1 cut(s)	261
HpyCH4V	TGCA	8 cut(s)	92, 162, 529, 539, 562, 989, 1033, 1337
HpyF10VI	GCNNNNNNNGC	3 cut(s)	15, 979, 1202
HpyF3I	CTNAG	8 cut(s)	69, 399, 450, 819, 836, 1125, 1427, 1581
HpySE526I	ACGT	1 cut(s)	261
Hsp92II	CATG	9 cut(s)	346, 511, 587, 641, 712, 729, 1232, 1243, 1261
HspAI	GCGC	2 cut(s)	16, 971
Kzo9I	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
Lsp1109I	GCAGC	5 cut(s)	174, 235, 541, 1222, 1322
LweI	GCATC	2 cut(s)	998, 1573
MaeI	CTAG	3 cut(s)	554, 914, 1206
MaeII	ACGT	1 cut(s)	261
MaeIII	GTNAC	2 cut(s)	823, 1444
MalI	GATC	8 cut(s)	397, 734, 1041, 1084, 1419, 1434, 1478, 1509
MboI	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
MflI	RGATCY	4 cut(s)	395, 1432, 1476, 1507
MhlI	GDGCHC	3 cut(s)	465, 855, 1198
MluCI	AATT	7 cut(s)	421, 524, 641, 840, 948, 1105, 1371
MlyI	GAGTC	2 cut(s)	74, 1237
MmeI	TCCRAC	1 cut(s)	604
MseI	TTAA	2 cut(s)	1200, 1352
MslI	CAYNNNNRTG	1 cut(s)	570
MspR9I	CCNGG	1 cut(s)	1266
MvaI	CCWGG	1 cut(s)	1266
MwoI	GCNNNNNNNGC	3 cut(s)	15, 979, 1202
NdeII	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
NlaIII	CATG	9 cut(s)	346, 511, 587, 641, 712, 729, 1232, 1243, 1261
NlaIV	GGNNCC	3 cut(s)	177, 1196, 1332
NmuCI	GTSAC	1 cut(s)	823
NspV	TTCGAA	1 cut(s)	904
PagI	TCATGA	3 cut(s)	342, 637, 1257
PceI	AGGCCT	1 cut(s)	243
PfeI	GAWTC	2 cut(s)	863, 936
PkrI	GCNGC	5 cut(s)	164, 250, 531, 1237, 1312
PleI	GAGTC	2 cut(s)	73, 1237
PpsI	GAGTC	2 cut(s)	73, 1237
Psp124BI	GAGCTC	1 cut(s)	855
Psp6I	CCWGG	1 cut(s)	1264
PspFI	CCCAGC	1 cut(s)	678
PspGI	CCWGG	1 cut(s)	1264
PspN4I	GGNNCC	3 cut(s)	177, 1196, 1332
PspOMI	GGGCCC	1 cut(s)	1194
PspPI	GGNCC	3 cut(s)	175, 1194, 1195
PsuI	RGATCY	4 cut(s)	395, 1432, 1476, 1507
RsaI	GTAC	2 cut(s)	591, 1466
RsaNI	GTAC	2 cut(s)	590, 1465
RseI	CAYNNNNRTG	1 cut(s)	570
SacI	GAGCTC	1 cut(s)	855
SaqAI	TTAA	2 cut(s)	1200, 1352
SatI	GCNGC	5 cut(s)	163, 249, 530, 1236, 1311
Sau3AI	GATC	8 cut(s)	395, 732, 1039, 1082, 1417, 1432, 1476, 1507
Sau96I	GGNCC	3 cut(s)	175, 1194, 1195
SchI	GAGTC	2 cut(s)	74, 1237
ScrFI	CCNGG	1 cut(s)	1266
SduI	GDGCHC	3 cut(s)	465, 855, 1198
SfaNI	GCATC	2 cut(s)	998, 1573
SfcI	CTRYAG	1 cut(s)	391
SfuI	TTCGAA	1 cut(s)	904
SmiMI	CAYNNNNRTG	1 cut(s)	570
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
Sse9I	AATT	7 cut(s)	421, 524, 641, 840, 948, 1105, 1371
SseBI	AGGCCT	1 cut(s)	243
SsiI	CCGC	1 cut(s)	792
SspI	AATATT	1 cut(s)	1322
SspMI	CTAG	3 cut(s)	554, 914, 1206
SstI	GAGCTC	1 cut(s)	855
StuI	AGGCCT	1 cut(s)	243
StyD4I	CCNGG	1 cut(s)	1264
StyI	CCWWGG	1 cut(s)	1294
TaaI	ACNGT	6 cut(s)	480, 765, 829, 859, 1303, 1498
TaiI	ACGT	1 cut(s)	264
TaqI	TCGA	5 cut(s)	221, 608, 904, 934, 1075
TaqII	GACCGA	2 cut(s)	933, 1187
TasI	AATT	7 cut(s)	421, 524, 641, 840, 948, 1105, 1371
TatI	WGTACW	1 cut(s)	1464
TfiI	GAWTC	2 cut(s)	863, 936
Tru1I	TTAA	2 cut(s)	1200, 1352
Tru9I	TTAA	2 cut(s)	1200, 1352
TscAI	CASTG	7 cut(s)	32, 575, 603, 815, 832, 862, 876
TseFI	GTSAC	1 cut(s)	823
TseI	GCWGC	5 cut(s)	162, 248, 529, 1235, 1310
Tsp45I	GTSAC	1 cut(s)	823
TspGWI	ACGGA	1 cut(s)	420
TspRI	CASTG	7 cut(s)	32, 575, 603, 815, 832, 862, 876
XapI	RAATTY	4 cut(s)	641, 840, 1105, 1371
XbaI	TCTAGA	1 cut(s)	913
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1174
XmiI	GTMKAC	1 cut(s)	482
XspI	CTAG	3 cut(s)	554, 914, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.