Prupe.8G062700_v2.0.a1

Encoded by

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
9103322 .. 9107466
4145 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G062700.5

Sequence Viewer

Length: 1140 bp
ATGGAAACCACAACACCAATCTCATGCAGCGATTCCTATGATCACCAAGACACACAAGAAAGCTGCATCCGCGGCCATATAATTGCTTGCGGTGGAGGTGCAGATCACAAGGACAAAGGAGGTGAGCGTGGCCTGAGGAAAAAAGTAAAGAGGTTTTTTCATAGCAAGGCCTCATCAAACAGTTCGGGTGTTAATTCATCATCAGTGGCCATGGCCAGTTTTGAGCCATCTTGTCGAGAGAAGTTGACGTCGTCGCCCTCTGTCGTGATCCCGGCCGCCCCGGCTGCAGCATGTGGAGGATCGAACAAGCGTGCACTTCTTTGCGGGGTGACATACAGTCATCAGCATAGATACATGCTCAAGGGCACTGCTAATGATGTGAGTAACATGAAAAACTTGTTGACTAACACCTTTGGTTATCCTGCCGAATGCATACGCATACTTTCAGAAGATGATCCAGGTGCCCAAGATTTGATACCAACGAAGAAAAACATAGAAAATTCTTTGAAATGGCTTGTGGAGGGCTGCAAATGGGGAGATTCCTTGGTATTCTACTTCTCAGGGCATGGCTTACGGCAGCCTGATTTCCAGAACGATGAGATTGATGGGTATGATGAGACTATTTGCCCCGTTGATTTCCTGAAAGAGGGCATGATCCTTGACAATGATATCAACAAAACCATTGTTTGGCCACTCAAGGCGGGTGTCAAACTCCATGCTATTGTTGATGCTTGTCACAGTGGAACAATTCTCGATCTCGAACACGTGTACGACCGAAAACAGAGGACTTGGATTAATAATCTTCCTCCATCTGGTGCTAGAAAAAGTACAAGTGGTGGGCTGGCGATTTCAATCAGTGCTTGCGAAGATGATAAAATGGCAGCAGATACTACTGTTTTTACTAAAAAAAAAATGAATGGTGCTATGACATACATTCTCACTGAAACTGTTAAGGAAAACCCTCAAATGACATATGGGGCTTTGCTAGACACCATGGCCAATCACATTGAAAATATTAACAACGAAAGATGGATCAAGTCAAGGATCATAAGGAAAGTACTTCGACACAAAACCATACAGGAACCTATGCTGTCATCTTCTACAAAGTTTGAGGTTTACGACACGAAATTTATCTTGTAA

Protein Analysis

380

Amino Acids

41.92

Weight (kDa)

7.57

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 461
AccB7I CCANNNNNTGG 1 cut(s) 687
AccII CGCG 1 cut(s) 72
AciI CCGC 6 cut(s) 70, 72, 90, 276, 324, 701
AclWI GGATC 6 cut(s) 262, 307, 449, 649, 1040, 1052
AcoI YGGCCR 6 cut(s) 73, 207, 213, 273, 689, 996
AcsI RAATTY 2 cut(s) 499, 1127
AcvI CACGTG 1 cut(s) 766
AcyI GRCGYC 1 cut(s) 248
AfaI GTAC 3 cut(s) 770, 829, 1059
AfiI CCNNNNNNNGG 3 cut(s) 646, 687, 812
AflIII ACRYGT 2 cut(s) 763, 765
AgsI TTSAA 3 cut(s) 508, 852, 1010
AhdI GACNNNNNGTC 1 cut(s) 336
AjnI CCWGG 1 cut(s) 457
AluBI AGCT 1 cut(s) 63
AluI AGCT 1 cut(s) 63
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 1 cut(s) 611
Alw44I GTGCAC 1 cut(s) 312
AlwI GGATC 6 cut(s) 262, 307, 449, 649, 1040, 1052
AoxI GGCC 8 cut(s) 73, 130, 168, 207, 213, 273, 689, 996
ApaLI GTGCAC 1 cut(s) 312
ApeKI GCWGC 7 cut(s) 27, 63, 284, 287, 525, 577, 881
ApoI RAATTY 2 cut(s) 499, 1127
AseI ATTAAT 1 cut(s) 795
AsuC2I CCSGG 2 cut(s) 272, 281
AsuHPI GGTGA 3 cut(s) 35, 134, 340
AxyI CCTNAGG 1 cut(s) 134
BaeGI GKGCMC 3 cut(s) 316, 368, 466
BaeI ACNNNNGTAYC 2 cut(s) 879, 912
BalI TGGCCA 4 cut(s) 209, 215, 691, 998
BanI GGYRCC 1 cut(s) 461
BbrPI CACGTG 1 cut(s) 766
Bbv12I GWGCWC 1 cut(s) 316
BbvI GCAGC 7 cut(s) 39, 50, 271, 299, 512, 589, 893
BccI CCATC 4 cut(s) 235, 599, 817, 1023
BceAI ACGGC 1 cut(s) 590
BciT130I CCWGG 1 cut(s) 459
BclI TGATCA 1 cut(s) 40
BcnI CCSGG 2 cut(s) 272, 281
BcoDI GTCTC 1 cut(s) 611
BfaI CTAG 2 cut(s) 819, 986
BfmI CTRYAG 1 cut(s) 285
BglI GCCNNNNNGGC 1 cut(s) 281
BisI GCNGC 9 cut(s) 28, 64, 73, 276, 285, 288, 526, 578, 882
BlsI GCNGC 9 cut(s) 29, 65, 74, 277, 286, 289, 527, 579, 883
BmcAI AGTACT 1 cut(s) 1059
Bme1390I CCNGG 3 cut(s) 272, 281, 459
BmeRI GACNNNNNGTC 1 cut(s) 336
BmiI GGNNCC 2 cut(s) 463, 1083
BmrFI CCNGG 3 cut(s) 272, 281, 459
BmsI GCATC 2 cut(s) 75, 718
BpuEI CTTGAG 2 cut(s) 344, 680
BpuMI CCSGG 2 cut(s) 272, 281
BsaAI YACGTR 1 cut(s) 766
BsaBI GATNNNNATC 1 cut(s) 851
BsaHI GRCGYC 1 cut(s) 248
BsaJI CCNNGG 5 cut(s) 70, 210, 279, 543, 993
Bsc4I CCNNNNNNNGG 3 cut(s) 646, 687, 812
Bse1I ACTGG 1 cut(s) 216
Bse21I CCTNAGG 1 cut(s) 134
Bse8I GATNNNNATC 1 cut(s) 851
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 5 cut(s) 70, 210, 279, 543, 993
BseGI GGATG 1 cut(s) 66
BseJI GATNNNNATC 1 cut(s) 851
BseLI CCNNNNNNNGG 3 cut(s) 646, 687, 812
BseMII CTCAG 2 cut(s) 125, 573
BseNI ACTGG 1 cut(s) 216
BseSI GKGCMC 3 cut(s) 316, 368, 466
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 7 cut(s) 39, 50, 271, 299, 512, 589, 893
BsgI GTGCAG 1 cut(s) 120
Bsh1236I CGCG 1 cut(s) 72
Bsh1285I CGRYCG 2 cut(s) 276, 775
BshFI GGCC 8 cut(s) 75, 132, 170, 209, 215, 275, 691, 998
BshNI GGYRCC 1 cut(s) 461
BsiEI CGRYCG 2 cut(s) 276, 775
BsiHKAI GWGCWC 1 cut(s) 316
BsiSI CCGG 2 cut(s) 272, 281
BslI CCNNNNNNNGG 3 cut(s) 646, 687, 812
BsmAI GTCTC 1 cut(s) 611
BsmI GAATGC 1 cut(s) 434
BsnI GGCC 8 cut(s) 75, 132, 170, 209, 215, 275, 691, 998
Bsp1286I GDGCHC 3 cut(s) 316, 368, 466
Bsp143I GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
Bsp19I CCATGG 2 cut(s) 210, 993
BspACI CCGC 6 cut(s) 70, 72, 90, 276, 324, 701
BspANI GGCC 8 cut(s) 75, 132, 170, 209, 215, 275, 691, 998
BspCNI CTCAG 2 cut(s) 126, 572
BspFNI CGCG 1 cut(s) 72
BspLI GGNNCC 2 cut(s) 463, 1083
BspMAI CTGCAG 1 cut(s) 289
BspPI GGATC 6 cut(s) 262, 307, 449, 649, 1040, 1052
BspT107I GGYRCC 1 cut(s) 461
BsrI ACTGG 1 cut(s) 216
BssECI CCNNGG 5 cut(s) 70, 210, 279, 543, 993
BssMI GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
BssNI GRCGYC 1 cut(s) 248
BssT1I CCWWGG 3 cut(s) 210, 543, 993
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 5 cut(s) 182, 338, 740, 895, 949
BstACI GRCGYC 1 cut(s) 248
BstBAI YACGTR 1 cut(s) 766
BstC8I GCNNGC 4 cut(s) 88, 312, 843, 862
BstDEI CTNAG 2 cut(s) 134, 559
BstDSI CCRYGG 3 cut(s) 70, 210, 993
BstENI CCTNNNNNAGG 1 cut(s) 644
BstF5I GGATG 1 cut(s) 66
BstFNI CGCG 1 cut(s) 72
BstKTI GATC 9 cut(s) 43, 106, 270, 302, 457, 657, 757, 1035, 1047
BstMAI GTCTC 1 cut(s) 611
BstMBI GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
BstMCI CGRYCG 2 cut(s) 276, 775
BstMWI GCNNNNNNNGC 4 cut(s) 69, 72, 281, 284
BstNI CCWGG 1 cut(s) 459
BstNSI RCATGY 2 cut(s) 294, 358
BstSCI CCNGG 3 cut(s) 270, 279, 457
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 3 cut(s) 316, 368, 466
BstUI CGCG 1 cut(s) 72
BstV1I GCAGC 7 cut(s) 39, 50, 271, 299, 512, 589, 893
BstZI CGGCCG 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 134
BsuRI GGCC 8 cut(s) 75, 132, 170, 209, 215, 275, 691, 998
BtgI CCRYGG 3 cut(s) 70, 210, 993
BtsCI GGATG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 5 cut(s) 210, 366, 745, 862, 939
Cac8I GCNNGC 4 cut(s) 88, 312, 843, 862
Cfr42I CCGCGG 1 cut(s) 73
Csp6I GTAC 3 cut(s) 769, 828, 1058
CviAII CATG 9 cut(s) 24, 211, 291, 355, 388, 566, 652, 716, 994
CviQI GTAC 3 cut(s) 769, 828, 1058
DdeI CTNAG 2 cut(s) 134, 559
DpnI GATC 9 cut(s) 42, 105, 269, 301, 456, 656, 756, 1034, 1046
DpnII GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
DriI GACNNNNNGTC 1 cut(s) 336
EaeI YGGCCR 6 cut(s) 73, 207, 213, 273, 689, 996
EagI CGGCCG 1 cut(s) 273
Eam1105I GACNNNNNGTC 1 cut(s) 336
EclXI CGGCCG 1 cut(s) 273
Eco130I CCWWGG 3 cut(s) 210, 543, 993
Eco147I AGGCCT 1 cut(s) 170
Eco32I GATATC 1 cut(s) 670
Eco52I CGGCCG 1 cut(s) 273
Eco72I CACGTG 1 cut(s) 766
Eco81I CCTNAGG 1 cut(s) 134
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoRII CCWGG 1 cut(s) 457
EcoRV GATATC 1 cut(s) 670
EcoT14I CCWWGG 3 cut(s) 210, 543, 993
EcoT22I ATGCAT 1 cut(s) 434
ErhI CCWWGG 3 cut(s) 210, 543, 993
FaeI CATG 9 cut(s) 27, 214, 294, 358, 391, 569, 655, 719, 997
FatI CATG 9 cut(s) 23, 210, 290, 354, 387, 565, 651, 715, 993
FauI CCCGC 2 cut(s) 317, 694
FauNDI CATATG 1 cut(s) 973
FbaI TGATCA 1 cut(s) 40
Fnu4HI GCNGC 9 cut(s) 28, 64, 73, 276, 285, 288, 526, 578, 882
FokI GGATG 1 cut(s) 53
Fsp4HI GCNGC 9 cut(s) 28, 64, 73, 276, 285, 288, 526, 578, 882
FspBI CTAG 2 cut(s) 819, 986
GluI GCNGC 9 cut(s) 28, 64, 73, 276, 285, 288, 526, 578, 882
HaeIII GGCC 8 cut(s) 75, 132, 170, 209, 215, 275, 691, 998
HapII CCGG 2 cut(s) 272, 281
Hin1I GRCGYC 1 cut(s) 248
Hin1II CATG 9 cut(s) 27, 214, 294, 358, 391, 569, 655, 719, 997
HincII GTYRAC 2 cut(s) 246, 402
HindII GTYRAC 2 cut(s) 246, 402
HinfI GANTC 2 cut(s) 32, 539
HpaII CCGG 2 cut(s) 272, 281
HphI GGTGA 3 cut(s) 35, 134, 340
Hpy166II GTNNAC 5 cut(s) 246, 314, 402, 769, 1117
Hpy188I TCNGA 1 cut(s) 448
Hpy188III TCNNGA 6 cut(s) 236, 265, 589, 640, 752, 758
Hpy8I GTNNAC 5 cut(s) 246, 314, 402, 769, 1117
Hpy99I CGWCG 2 cut(s) 253, 256
HpyCH4III ACNGT 5 cut(s) 182, 338, 740, 895, 949
HpyCH4IV ACGT 2 cut(s) 248, 765
HpyCH4V TGCA 7 cut(s) 27, 66, 101, 287, 314, 432, 528
HpyF10VI GCNNNNNNNGC 4 cut(s) 69, 72, 281, 284
HpyF3I CTNAG 2 cut(s) 134, 559
HpySE526I ACGT 2 cut(s) 248, 765
Hsp92I GRCGYC 1 cut(s) 248
Hsp92II CATG 9 cut(s) 27, 214, 294, 358, 391, 569, 655, 719, 997
Ksp22I TGATCA 1 cut(s) 40
KspI CCGCGG 1 cut(s) 73
Kzo9I GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
Lsp1109I GCAGC 7 cut(s) 39, 50, 271, 299, 512, 589, 893
LweI GCATC 2 cut(s) 75, 718
MaeI CTAG 2 cut(s) 819, 986
MaeII ACGT 2 cut(s) 248, 765
MaeIII GTNAC 3 cut(s) 328, 383, 734
MalI GATC 9 cut(s) 42, 105, 269, 301, 456, 656, 756, 1034, 1046
MboI GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
MboII GAAGA 5 cut(s) 461, 496, 794, 878, 1089
MhlI GDGCHC 3 cut(s) 316, 368, 466
MlsI TGGCCA 4 cut(s) 209, 215, 691, 998
MluCI AATT 5 cut(s) 81, 193, 499, 747, 1127
MluNI TGGCCA 4 cut(s) 209, 215, 691, 998
Mox20I TGGCCA 4 cut(s) 209, 215, 691, 998
Mph1103I ATGCAT 1 cut(s) 434
MscI TGGCCA 4 cut(s) 209, 215, 691, 998
MseI TTAA 4 cut(s) 192, 795, 951, 1017
Msp20I TGGCCA 4 cut(s) 209, 215, 691, 998
MspA1I CMGCKG 1 cut(s) 72
MspI CCGG 2 cut(s) 272, 281
MspR9I CCNGG 3 cut(s) 272, 281, 459
Mva1269I GAATGC 1 cut(s) 434
MvaI CCWGG 1 cut(s) 459
MvnI CGCG 1 cut(s) 72
MwoI GCNNNNNNNGC 4 cut(s) 69, 72, 281, 284
NciI CCSGG 2 cut(s) 272, 281
NcoI CCATGG 2 cut(s) 210, 993
NdeI CATATG 1 cut(s) 973
NdeII GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
NlaIII CATG 9 cut(s) 27, 214, 294, 358, 391, 569, 655, 719, 997
NlaIV GGNNCC 2 cut(s) 463, 1083
NmuCI GTSAC 2 cut(s) 328, 734
NsiI ATGCAT 1 cut(s) 434
NspI RCATGY 2 cut(s) 294, 358
PceI AGGCCT 1 cut(s) 170
PctI GAATGC 1 cut(s) 434
PfeI GAWTC 2 cut(s) 32, 539
PflFI GACNNNGTC 1 cut(s) 250
PflMI CCANNNNNTGG 1 cut(s) 687
PkrI GCNGC 9 cut(s) 29, 65, 74, 277, 286, 289, 527, 579, 883
PmaCI CACGTG 1 cut(s) 766
PmlI CACGTG 1 cut(s) 766
Ppu21I YACGTR 1 cut(s) 766
PshBI ATTAAT 1 cut(s) 795
Psp6I CCWGG 1 cut(s) 457
PspCI CACGTG 1 cut(s) 766
PspGI CCWGG 1 cut(s) 457
PspN4I GGNNCC 2 cut(s) 463, 1083
PstI CTGCAG 1 cut(s) 289
PsyI GACNNNGTC 1 cut(s) 250
RsaI GTAC 3 cut(s) 770, 829, 1059
RsaNI GTAC 3 cut(s) 769, 828, 1058
SacII CCGCGG 1 cut(s) 73
SaqAI TTAA 4 cut(s) 192, 795, 951, 1017
SatI GCNGC 9 cut(s) 28, 64, 73, 276, 285, 288, 526, 578, 882
Sau3AI GATC 9 cut(s) 40, 103, 267, 299, 454, 654, 754, 1032, 1044
ScaI AGTACT 1 cut(s) 1059
ScrFI CCNGG 3 cut(s) 272, 281, 459
SduI GDGCHC 3 cut(s) 316, 368, 466
SfaNI GCATC 2 cut(s) 75, 718
SfcI CTRYAG 1 cut(s) 285
Sfr303I CCGCGG 1 cut(s) 73
SgrBI CCGCGG 1 cut(s) 73
SmlI CTYRAG 2 cut(s) 359, 695
SmoI CTYRAG 2 cut(s) 359, 695
Sse9I AATT 5 cut(s) 81, 193, 499, 747, 1127
SseBI AGGCCT 1 cut(s) 170
SsiI CCGC 6 cut(s) 70, 72, 90, 276, 324, 701
SspI AATATT 1 cut(s) 1015
SspMI CTAG 2 cut(s) 819, 986
StuI AGGCCT 1 cut(s) 170
StyD4I CCNGG 3 cut(s) 270, 279, 457
StyI CCWWGG 3 cut(s) 210, 543, 993
TaaI ACNGT 5 cut(s) 182, 338, 740, 895, 949
TaiI ACGT 2 cut(s) 251, 768
TaqI TCGA 5 cut(s) 235, 302, 753, 759, 1063
TaqII GACCGA 1 cut(s) 789
TasI AATT 5 cut(s) 81, 193, 499, 747, 1127
TatI WGTACW 2 cut(s) 827, 1057
TauI GCSGC 2 cut(s) 75, 278
TfiI GAWTC 2 cut(s) 32, 539
Tru1I TTAA 4 cut(s) 192, 795, 951, 1017
Tru9I TTAA 4 cut(s) 192, 795, 951, 1017
TscAI CASTG 5 cut(s) 210, 373, 745, 862, 946
TseFI GTSAC 2 cut(s) 328, 734
TseI GCWGC 7 cut(s) 27, 63, 284, 287, 525, 577, 881
Tsp45I GTSAC 2 cut(s) 328, 734
TspDTI ATGAA 4 cut(s) 149, 186, 404, 929
TspRI CASTG 5 cut(s) 210, 373, 745, 862, 946
Tth111I GACNNNGTC 1 cut(s) 250
Van91I CCANNNNNTGG 1 cut(s) 687
VneI GTGCAC 1 cut(s) 312
VspI ATTAAT 1 cut(s) 795
XagI CCTNNNNNAGG 1 cut(s) 644
XapI RAATTY 2 cut(s) 499, 1127
XceI RCATGY 2 cut(s) 294, 358
XspI CTAG 2 cut(s) 819, 986
ZraI GACGTC 1 cut(s) 249
ZrmI AGTACT 1 cut(s) 1059
Zsp2I ATGCAT 1 cut(s) 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.