pycom01g22110

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0002368
Physical Location & Seq
Forward (+)
19828248 .. 19829675
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g22110.1

Sequence Viewer

Length: 1428 bp
ATGGAGGAAGTAGCTATCGTTTTATATCCATCACCGCCGATTGGCCACTTGGTCTCCATGGTAGAGCTAGGCAAGCTCATACTCACCCACCACCCTTCTCTGCGCATCCACATCCTCATCACCACCCCGCCCTACCGCGCCGACGACACCGCCTCATACATCACCTCCGTCTCCGCCACCATCCCCTCCCTCATCTTCCACCACCTCCCCACCATCTCTCTCCCTCCCTCCCTCGCCTCCTCCCCCAACCACGAAACCCTAACCTTCGAAGTCCTACTCCTCAACAACCCTTACGTCCACCAAGCCCTCCTCTCCATCTCCCATAACTTCTCCATCAAAGCTTTTGTCATGGACTTCTTCTGCGCTCTCGGGCTCTCCGTTGCCACCGACCTGAGCATCCCCAGCTACTTCTTCTACACATCCGGCGCCGCCACCCTCGCCGGCTTCCTTTACTTCCCCACCACTCACAACAATACTGACAAAAGCCTCAAAGACCTAAATACCCTTATCAACATTCCAGGAGTCCCGCCGATTCCTTCCTCCGATATGCCGAAACCGATTCTTGAACGAAACGACAAGGCGTACGAACATTTCCTAGAAAACTCAAAGCAGTTCCCCAAATCCGCTGGGATTATCATAAACACGTTCGAATCTCTCGAACCTAGAGCTCTCAAAGCAATATCGGATGGTCTGTGCTTGCCCGAGGACGTTCCCACGCCGCCGATCTATCCCATTGGACCGCTGATTGTTTCCCACGGCGGTGGAGGCCGCGAGGTCGAGTGTTTGAAATGGCTGGACTCACAGCCAAGTGGAAGCGTGGTGTTCCTCTGTTTTGGGAGCTTGGGATTGTTTTCAAAGGAGCAGTTGAAGGAAATTGCAATGGGTTTGGAGAATAGTGGGCAGAGATTTTTGTGGGTGGTCCGTAATCCGCCAGCCCAAAATCAAATTGGGGTAGCCATTACGGAACAGTCCGATCCAGAATTGAAATCTTTGCTTTCCGATGGATTCTTGGATCGGACCAAAGACCGCGGTCTTGTGGTCAAGACGTGGGCCCCGCAAGTGGCGGTGTTGAATCACGACTCGGTGGGTGGGTTTGTGAGTCATTGCGGATGGAACTCGGTGTTGGAATCGGTGTGTGCTGGGGTGCCGATGGTGGCTTGGCCACTCTACGCCGAGCAGAGATTCAACCGGGTGGTTTTGGTGGAGGAGATTAAAATTGCATTGCCAATGAACGAGTCGGAAGACGGGTTTGTGAGTGCGGCAGAGGTGGAGAAGCGAGTTATTGAGTTAATGGACTCGTCCGAGGGCGAGTCGATTAGGAAGCGTACGAAGGCTTTTCAGAACGAAGCCCATGCAGCGTTGGATGAGGGCGGGTCGTCTCGGGTTGCATTGACTGAACTACTTGAACTATGGAGCCAAACCGGTTAG

Protein Analysis

476

Amino Acids

51.98

Weight (kDa)

5.27

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 265 - 399 3.4e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 104
AccB1I GGYRCC 2 cut(s) 425, 1144
AccII CGCG 3 cut(s) 138, 771, 1029
AclWI GGATC 2 cut(s) 968, 1020
AcoI YGGCCR 2 cut(s) 43, 1160
AcyI GRCGYC 1 cut(s) 426
AfaI GTAC 2 cut(s) 584, 1327
AfiI CCNNNNNNNGG 2 cut(s) 41, 1060
AflIII ACRYGT 1 cut(s) 642
AgeI ACCGGT 1 cut(s) 1421
AgsI TTSAA 8 cut(s) 566, 787, 855, 868, 985, 1072, 1186, 1406
AjiI CACGTC 1 cut(s) 1047
AjnI CCWGG 1 cut(s) 517
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
AleI CACNNNNGTG 1 cut(s) 759
AluBI AGCT 7 cut(s) 14, 67, 76, 341, 405, 668, 840
AluI AGCT 7 cut(s) 14, 67, 76, 341, 405, 668, 840
Alw21I GWGCWC 1 cut(s) 670
Alw26I GTCTC 3 cut(s) 58, 175, 1383
AlwI GGATC 2 cut(s) 968, 1020
Ama87I CYCGRG 3 cut(s) 368, 701, 1380
AoxI GGCC 4 cut(s) 43, 766, 1050, 1160
ApaI GGGCCC 1 cut(s) 1054
ApeKI GCWGC 1 cut(s) 1355
ArsI GACNNNNNNTTYG 2 cut(s) 330, 362
AsiGI ACCGGT 1 cut(s) 1421
AspLEI GCGC 4 cut(s) 105, 140, 365, 428
AspS9I GGNCC 5 cut(s) 737, 919, 1017, 1050, 1051
AsuC2I CCSGG 1 cut(s) 1190
AsuHPI GGTGA 4 cut(s) 24, 76, 112, 154
AsuII TTCGAA 2 cut(s) 267, 648
AvaI CYCGRG 3 cut(s) 368, 701, 1380
AvaII GGWCC 3 cut(s) 737, 919, 1017
BaeGI GKGCMC 1 cut(s) 1054
BalI TGGCCA 2 cut(s) 45, 1162
BanI GGYRCC 2 cut(s) 425, 1144
BanII GRGCYC 3 cut(s) 375, 670, 1054
BbsI GAAGAC 1 cut(s) 1248
Bbv12I GWGCWC 1 cut(s) 670
BbvI GCAGC 1 cut(s) 1367
BccI CCATC 9 cut(s) 37, 188, 221, 323, 341, 680, 995, 1104, 1144
BceAI ACGGC 1 cut(s) 772
BcgI CGANNNNNNTGC 2 cut(s) 1334, 1368
BciT130I CCWGG 1 cut(s) 519
BcnI CCSGG 1 cut(s) 1190
BcoDI GTCTC 3 cut(s) 58, 175, 1383
BfaI CTAG 3 cut(s) 68, 596, 663
BfoI RGCGCY 1 cut(s) 429
BisI GCNGC 5 cut(s) 429, 719, 769, 1260, 1356
BlsI GCNGC 5 cut(s) 430, 720, 770, 1261, 1357
Bme1390I CCNGG 2 cut(s) 519, 1190
Bme18I GGWCC 3 cut(s) 737, 919, 1017
BmeT110I CYCGRG 3 cut(s) 368, 701, 1380
BmgBI CACGTC 1 cut(s) 1047
BmgT120I GGNCC 5 cut(s) 737, 919, 1017, 1050, 1051
BmiI GGNNCC 5 cut(s) 427, 1052, 1053, 1146, 1415
BmrFI CCNGG 2 cut(s) 519, 1190
BmsI GCATC 2 cut(s) 114, 405
BoxI GACNNNNGTC 1 cut(s) 1029
BpiI GAAGAC 1 cut(s) 1248
Bpu10I CCTNAGC 1 cut(s) 392
Bpu14I TTCGAA 2 cut(s) 267, 648
BpuMI CCSGG 1 cut(s) 1190
BsaHI GRCGYC 1 cut(s) 426
BsaI GGTCTC 1 cut(s) 58
BsaJI CCNNGG 5 cut(s) 57, 702, 754, 1027, 1302
BsaWI WCCGGW 1 cut(s) 1421
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 149, 179
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 1060
Bse118I RCCGGY 2 cut(s) 440, 1421
Bse3DI GCAATG 3 cut(s) 885, 1102, 1220
BseBI CCWGG 1 cut(s) 519
BseDI CCNNGG 5 cut(s) 57, 702, 754, 1027, 1302
BseGI GGATG 8 cut(s) 105, 111, 180, 396, 419, 691, 1115, 1369
BseLI CCNNNNNNNGG 2 cut(s) 41, 1060
BseMI GCAATG 3 cut(s) 885, 1102, 1220
BseMII CTCAG 1 cut(s) 383
BseRI GAGGAG 4 cut(s) 229, 269, 299, 1220
BseSI GKGCMC 1 cut(s) 1054
BseXI GCAGC 1 cut(s) 1367
BseYI CCCAGC 3 cut(s) 401, 626, 1139
Bsh1236I CGCG 3 cut(s) 138, 771, 1029
BshFI GGCC 4 cut(s) 45, 768, 1052, 1162
BshNI GGYRCC 2 cut(s) 425, 1144
BshTI ACCGGT 1 cut(s) 1421
BsiHKAI GWGCWC 1 cut(s) 670
BsiHKCI CYCGRG 3 cut(s) 368, 701, 1380
BsiSI CCGG 4 cut(s) 423, 441, 1189, 1422
BsiWI CGTACG 2 cut(s) 582, 1325
BslFI GGGAC 1 cut(s) 509
BslI CCNNNNNNNGG 2 cut(s) 41, 1060
BsmAI GTCTC 3 cut(s) 58, 175, 1383
BsmBI CGTCTC 2 cut(s) 175, 1383
BsmFI GGGAC 1 cut(s) 509
BsnI GGCC 4 cut(s) 45, 768, 1052, 1162
Bso31I GGTCTC 1 cut(s) 58
BsoBI CYCGRG 3 cut(s) 368, 701, 1380
Bsp119I TTCGAA 2 cut(s) 267, 648
Bsp120I GGGCCC 1 cut(s) 1050
Bsp1286I GDGCHC 3 cut(s) 375, 670, 1054
Bsp143I GATC 3 cut(s) 723, 973, 1012
Bsp19I CCATGG 1 cut(s) 57
BspANI GGCC 4 cut(s) 45, 768, 1052, 1162
BspCNI CTCAG 1 cut(s) 384
BspFNI CGCG 3 cut(s) 138, 771, 1029
BspLI GGNNCC 5 cut(s) 427, 1052, 1053, 1146, 1415
BspPI GGATC 2 cut(s) 968, 1020
BspT104I TTCGAA 2 cut(s) 267, 648
BspT107I GGYRCC 2 cut(s) 425, 1144
BspTNI GGTCTC 1 cut(s) 58
BsrDI GCAATG 3 cut(s) 885, 1102, 1220
BsrFI RCCGGY 2 cut(s) 440, 1421
BssAI RCCGGY 2 cut(s) 440, 1421
BssECI CCNNGG 5 cut(s) 57, 702, 754, 1027, 1302
BssMI GATC 3 cut(s) 723, 973, 1012
BssNI GRCGYC 1 cut(s) 426
BssT1I CCWWGG 1 cut(s) 57
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 1 cut(s) 969
BstACI GRCGYC 1 cut(s) 426
BstBI TTCGAA 2 cut(s) 267, 648
BstC8I GCNNGC 4 cut(s) 74, 442, 698, 933
BstDEI CTNAG 1 cut(s) 392
BstDSI CCRYGG 3 cut(s) 57, 754, 1027
BstF5I GGATG 8 cut(s) 105, 111, 180, 396, 419, 691, 1115, 1369
BstFNI CGCG 3 cut(s) 138, 771, 1029
BstH2I RGCGCY 1 cut(s) 429
BstHHI GCGC 4 cut(s) 105, 140, 365, 428
BstKTI GATC 3 cut(s) 726, 976, 1015
BstMAI GTCTC 3 cut(s) 58, 175, 1383
BstMBI GATC 3 cut(s) 723, 973, 1012
BstMWI GCNNNNNNNGC 6 cut(s) 73, 402, 437, 674, 765, 1355
BstNI CCWGG 1 cut(s) 519
BstPAI GACNNNNGTC 1 cut(s) 1029
BstSCI CCNGG 2 cut(s) 517, 1188
BstSLI GKGCMC 1 cut(s) 1054
BstUI CGCG 3 cut(s) 138, 771, 1029
BstV1I GCAGC 1 cut(s) 1367
BstV2I GAAGAC 1 cut(s) 1248
BstXI CCANNNNNNTGG 1 cut(s) 761
BsuRI GGCC 4 cut(s) 45, 768, 1052, 1162
BtgI CCRYGG 3 cut(s) 57, 754, 1027
BtrI CACGTC 1 cut(s) 1047
BtsCI GGATG 8 cut(s) 105, 111, 180, 396, 419, 691, 1115, 1369
Cac8I GCNNGC 4 cut(s) 74, 442, 698, 933
CfoI GCGC 4 cut(s) 105, 140, 365, 428
Cfr10I RCCGGY 2 cut(s) 440, 1421
Cfr13I GGNCC 5 cut(s) 737, 919, 1017, 1050, 1051
Cfr42I CCGCGG 1 cut(s) 1030
Csp6I GTAC 2 cut(s) 583, 1326
CspAI ACCGGT 1 cut(s) 1421
CviAII CATG 3 cut(s) 58, 349, 1352
CviQI GTAC 2 cut(s) 583, 1326
DdeI CTNAG 1 cut(s) 392
DinI GGCGCC 1 cut(s) 427
DpnI GATC 3 cut(s) 725, 975, 1014
DpnII GATC 3 cut(s) 723, 973, 1012
EaeI YGGCCR 2 cut(s) 43, 1160
EciI GGCGGA 2 cut(s) 163, 918
Ecl136II GAGCTC 1 cut(s) 668
Eco130I CCWWGG 1 cut(s) 57
Eco24I GRGCYC 3 cut(s) 375, 670, 1054
Eco31I GGTCTC 1 cut(s) 58
Eco47I GGWCC 3 cut(s) 737, 919, 1017
Eco53kI GAGCTC 1 cut(s) 668
Eco88I CYCGRG 3 cut(s) 368, 701, 1380
EcoICRI GAGCTC 1 cut(s) 668
EcoO109I RGGNCCY 1 cut(s) 1051
EcoRII CCWGG 1 cut(s) 517
EcoT14I CCWWGG 1 cut(s) 57
EcoT38I GRGCYC 3 cut(s) 375, 670, 1054
EgeI GGCGCC 1 cut(s) 427
EheI GGCGCC 1 cut(s) 427
ErhI CCWWGG 1 cut(s) 57
Esp3I CGTCTC 2 cut(s) 175, 1383
FaeI CATG 3 cut(s) 61, 352, 1355
FaqI GGGAC 1 cut(s) 509
FatI CATG 3 cut(s) 57, 348, 1351
FauI CCCGC 4 cut(s) 135, 534, 1062, 1364
Fnu4HI GCNGC 5 cut(s) 429, 719, 769, 1260, 1356
FokI GGATG 8 cut(s) 92, 98, 167, 383, 406, 698, 1122, 1376
FriOI GRGCYC 3 cut(s) 375, 670, 1054
Fsp4HI GCNGC 5 cut(s) 429, 719, 769, 1260, 1356
FspBI CTAG 3 cut(s) 68, 596, 663
FspI TGCGCA 1 cut(s) 104
GlaI GCGC 4 cut(s) 104, 139, 364, 427
GluI GCNGC 5 cut(s) 429, 719, 769, 1260, 1356
GsaI CCCAGC 3 cut(s) 405, 630, 1143
HaeII RGCGCY 1 cut(s) 429
HaeIII GGCC 4 cut(s) 45, 768, 1052, 1162
HapII CCGG 4 cut(s) 423, 441, 1189, 1422
HhaI GCGC 4 cut(s) 105, 140, 365, 428
Hin1I GRCGYC 1 cut(s) 426
Hin1II CATG 3 cut(s) 61, 352, 1355
Hin6I GCGC 4 cut(s) 103, 138, 363, 426
HinP1I GCGC 4 cut(s) 103, 138, 363, 426
HindIII AAGCTT 1 cut(s) 339
HpaII CCGG 4 cut(s) 423, 441, 1189, 1422
HphI GGTGA 4 cut(s) 24, 76, 112, 154
Hpy166II GTNNAC 1 cut(s) 298
Hpy188I TCNGA 8 cut(s) 544, 685, 973, 1000, 1017, 1240, 1303, 1341
Hpy188III TCNNGA 5 cut(s) 563, 656, 977, 1042, 1076
Hpy8I GTNNAC 1 cut(s) 298
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 5 cut(s) 105, 274, 546, 862, 1324
HpyCH4III ACNGT 1 cut(s) 969
HpyCH4IV ACGT 4 cut(s) 294, 644, 708, 1046
HpyCH4V TGCA 4 cut(s) 878, 1220, 1355, 1388
HpyF10VI GCNNNNNNNGC 6 cut(s) 73, 402, 437, 674, 765, 1355
HpyF3I CTNAG 1 cut(s) 392
HpySE526I ACGT 4 cut(s) 294, 644, 708, 1046
Hsp92I GRCGYC 1 cut(s) 426
Hsp92II CATG 3 cut(s) 61, 352, 1355
HspAI GCGC 4 cut(s) 103, 138, 363, 426
KasI GGCGCC 1 cut(s) 425
KroI GCCGGC 1 cut(s) 440
KroNI GCCGGC 1 cut(s) 442
KspI CCGCGG 1 cut(s) 1030
Kzo9I GATC 3 cut(s) 723, 973, 1012
LmnI GCTCC 3 cut(s) 837, 859, 1413
Lsp1109I GCAGC 1 cut(s) 1367
LweI GCATC 2 cut(s) 114, 405
MaeI CTAG 3 cut(s) 68, 596, 663
MaeII ACGT 4 cut(s) 294, 644, 708, 1046
MalI GATC 3 cut(s) 725, 975, 1014
MboI GATC 3 cut(s) 723, 973, 1012
MboII GAAGA 4 cut(s) 187, 349, 403, 1253
MhlI GDGCHC 3 cut(s) 375, 670, 1054
MlsI TGGCCA 2 cut(s) 45, 1162
MluCI AATT 4 cut(s) 873, 945, 980, 1215
MluNI TGGCCA 2 cut(s) 45, 1162
Mly113I GGCGCC 1 cut(s) 426
MlyI GAGTC 7 cut(s) 531, 791, 1073, 1108, 1244, 1289, 1319
MmeI TCCRAC 3 cut(s) 1104, 1218, 1341
Mox20I TGGCCA 2 cut(s) 45, 1162
MroNI GCCGGC 1 cut(s) 440
MscI TGGCCA 2 cut(s) 45, 1162
MseI TTAA 2 cut(s) 1212, 1289
MslI CAYNNNNRTG 1 cut(s) 759
Msp20I TGGCCA 2 cut(s) 45, 1162
MspA1I CMGCKG 3 cut(s) 626, 742, 1029
MspI CCGG 4 cut(s) 423, 441, 1189, 1422
MspR9I CCNGG 2 cut(s) 519, 1190
MvaI CCWGG 1 cut(s) 519
MvnI CGCG 3 cut(s) 138, 771, 1029
MwoI GCNNNNNNNGC 6 cut(s) 73, 402, 437, 674, 765, 1355
NaeI GCCGGC 1 cut(s) 442
NarI GGCGCC 1 cut(s) 426
NciI CCSGG 1 cut(s) 1190
NcoI CCATGG 1 cut(s) 57
NdeII GATC 3 cut(s) 723, 973, 1012
NgoMIV GCCGGC 1 cut(s) 440
NlaIII CATG 3 cut(s) 61, 352, 1355
NlaIV GGNNCC 5 cut(s) 427, 1052, 1053, 1146, 1415
NmeAIII GCCGAG 1 cut(s) 1198
NsbI TGCGCA 1 cut(s) 104
NspV TTCGAA 2 cut(s) 267, 648
OliI CACNNNNGTG 1 cut(s) 759
PcsI WCGNNNNNNNCGW 2 cut(s) 375, 654
PdiI GCCGGC 1 cut(s) 442
PfeI GAWTC 7 cut(s) 532, 559, 650, 1005, 1072, 1127, 1182
Pfl23II CGTACG 2 cut(s) 582, 1325
PfoI TCCNGGA 1 cut(s) 517
PinAI ACCGGT 1 cut(s) 1421
PkrI GCNGC 5 cut(s) 430, 720, 770, 1261, 1357
PleI GAGTC 7 cut(s) 530, 791, 1073, 1107, 1243, 1289, 1318
PluTI GGCGCC 1 cut(s) 429
PpsI GAGTC 7 cut(s) 530, 791, 1073, 1107, 1243, 1289, 1318
PshAI GACNNNNGTC 1 cut(s) 1029
Psp124BI GAGCTC 1 cut(s) 670
Psp6I CCWGG 1 cut(s) 517
PspFI CCCAGC 3 cut(s) 401, 626, 1139
PspGI CCWGG 1 cut(s) 517
PspLI CGTACG 2 cut(s) 582, 1325
PspN4I GGNNCC 5 cut(s) 427, 1052, 1053, 1146, 1415
PspOMI GGGCCC 1 cut(s) 1050
PspPI GGNCC 5 cut(s) 737, 919, 1017, 1050, 1051
RsaI GTAC 2 cut(s) 584, 1327
RsaNI GTAC 2 cut(s) 583, 1326
RseI CAYNNNNRTG 1 cut(s) 759
SacI GAGCTC 1 cut(s) 670
SacII CCGCGG 1 cut(s) 1030
SaqAI TTAA 2 cut(s) 1212, 1289
SatI GCNGC 5 cut(s) 429, 719, 769, 1260, 1356
Sau3AI GATC 3 cut(s) 723, 973, 1012
Sau96I GGNCC 5 cut(s) 737, 919, 1017, 1050, 1051
SchI GAGTC 7 cut(s) 531, 791, 1073, 1108, 1244, 1289, 1319
ScrFI CCNGG 2 cut(s) 519, 1190
SduI GDGCHC 3 cut(s) 375, 670, 1054
SfaNI GCATC 2 cut(s) 114, 405
SfoI GGCGCC 1 cut(s) 427
Sfr303I CCGCGG 1 cut(s) 1030
SfuI TTCGAA 2 cut(s) 267, 648
SgrBI CCGCGG 1 cut(s) 1030
SinI GGWCC 3 cut(s) 737, 919, 1017
SmiMI CAYNNNNRTG 1 cut(s) 759
Sse9I AATT 4 cut(s) 873, 945, 980, 1215
SspDI GGCGCC 1 cut(s) 425
SspMI CTAG 3 cut(s) 68, 596, 663
SstI GAGCTC 1 cut(s) 670
StyD4I CCNGG 2 cut(s) 517, 1188
StyI CCWWGG 1 cut(s) 57
TaaI ACNGT 1 cut(s) 969
TaiI ACGT 4 cut(s) 297, 647, 711, 1049
TaqI TCGA 5 cut(s) 267, 648, 657, 777, 1313
TasI AATT 4 cut(s) 873, 945, 980, 1215
TauI GCSGC 4 cut(s) 431, 721, 771, 1262
TfiI GAWTC 7 cut(s) 532, 559, 650, 1005, 1072, 1127, 1182
Tru1I TTAA 2 cut(s) 1212, 1289
Tru9I TTAA 2 cut(s) 1212, 1289
TseI GCWGC 1 cut(s) 1355
TspDTI ATGAA 1 cut(s) 1244
TspGWI ACGGA 4 cut(s) 157, 367, 911, 977
VpaK11BI GGWCC 3 cut(s) 737, 919, 1017
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XspI CTAG 3 cut(s) 68, 596, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.