Rmu_sc0000556.1_g000032

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000556.1
Physical Location & Seq
Reverse (-)
153102 .. 154523
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000556.1_g000032.1.cds

Sequence Viewer

Length: 1422 bp
atgggtggtgatgctatagttttgtatccgtatccaggactaggccacctaatttccatggtagagcttggcaaactcttactcactcaccacccttctttctccatcacaatcctcgcctcaaccgcgccaaccaccattgcagccaccgccaaactggtcgccagctccaatgatcagttgacaaactacatcaaagccgtctctgccgacaaccctgccatcaacttccaccatctcccaaccatttcttctcttccagaacacatcgagaagctcaacctccctttcgaatatgcacgtctccaaatccccaacatcctccaagtcctccaaacccttaagtcaagcctcaaagcccttatcctcgacatgttttgcgacgcattgttcgacgtcgcgaaagacctcaacatccctacattctacttctacacctccgcaggaaggagtcttgctgtcttactcaacatccccaccttccatcgcacaaccaacagtctgtctgattttggcgacgtccagatttccatttcgggcatgccgccgattcctgtttcggcaatgcccaagctgttgtttgaccgctctactaatttctacaagagcttcctttcgacttcaactcacatggcaaagtccaatggaatcattctcaacacgtttgatctgctggaagagagagccctcaaagcgttgagggctggactgtgcttgccgaaccaacctacacctccgatcttcaccgtcggaccgttgatctcagggaagagtggagataatgatgagcatgagagcttgaagtggctaaacaaccagcccaaagacagcgttgtgtttctatgtttcggaagcatgggagtgttttctatcaaacagttggaggccatggctttaggtttagagaaaagtggccagaggtttttgtgggtggtacgtaatccacctatagaagagttaccggtagaggagccaagtttggaggaaatattgccaaagggttttgtggaaagaacaaaggataggggacttgtggtgaggaagtgggcgcctcaggtggaggtactcagtcatgactcggtgggcgggttcgtgactcactgtgggtggaactcggttttggaagcagtgtgtaatggggtgccgatggttgcgtggcctttgtacgccgagcaaaagctgggcagggtgtttcttgtggaggagatgaaggtggctgtgggggtgaaagagtccgaaaccgggtttgtgagtgcggacgagttggagaagcgagtgagggagttgatggactccaagagtggggatgaaataagagggagggttttggagtttagaactggtggcgtgaaggccaaggaagaaggcgggtcttctgttgcttccttggccaagttggctcagctgtggaagcaaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

51.96

Weight (kDa)

6.29

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 399, 522
AccB1I GGYRCC 2 cut(s) 1048, 1141
AccBSI CCGCTC 1 cut(s) 588
AccII CGCG 2 cut(s) 128, 401
AciI CCGC 8 cut(s) 126, 150, 441, 545, 586, 1086, 1256, 1368
AcoI YGGCCR 2 cut(s) 913, 1389
AcyI GRCGYC 3 cut(s) 396, 519, 1049
AfaI GTAC 3 cut(s) 936, 1065, 1166
AfiI CCNNNNNNNGG 5 cut(s) 35, 41, 447, 1242, 1302
AflII CTTAAG 1 cut(s) 341
AflIII ACRYGT 2 cut(s) 372, 660
AgeI ACCGGT 1 cut(s) 961
AgsI TTSAA 2 cut(s) 624, 802
AjiI CACGTC 1 cut(s) 302
AjnI CCWGG 1 cut(s) 34
AjuI GAANNNNNNNTTGG 4 cut(s) 235, 267, 1103, 1135
AluBI AGCT 8 cut(s) 67, 168, 277, 574, 609, 798, 1180, 1405
AluI AGCT 8 cut(s) 67, 168, 277, 574, 609, 798, 1180, 1405
Alw26I GTCTC 2 cut(s) 208, 308
AoxI GGCC 6 cut(s) 43, 885, 913, 1157, 1353, 1389
ApeKI GCWGC 1 cut(s) 143
ArsI GACNNNNNNTTYG 2 cut(s) 374, 406
AsiGI ACCGGT 1 cut(s) 961
AspLEI GCGC 2 cut(s) 130, 1051
AspS9I GGNCC 1 cut(s) 752
AsuC2I CCSGG 1 cut(s) 1243
AsuHPI GGTGA 5 cut(s) 20, 80, 736, 1048, 1237
AsuII TTCGAA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 752
AxyI CCTNAGG 1 cut(s) 1053
BalI TGGCCA 2 cut(s) 915, 1391
BanI GGYRCC 2 cut(s) 1048, 1141
BanII GRGCYC 1 cut(s) 688
BbsI GAAGAC 1 cut(s) 1365
BbvI GCAGC 1 cut(s) 155
BccI CCATC 6 cut(s) 113, 230, 243, 492, 1141, 1282
BceAI ACGGC 1 cut(s) 185
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciT130I CCWGG 1 cut(s) 36
BciVI GTATCC 2 cut(s) 36, 42
BclI TGATCA 1 cut(s) 175
BcnI CCSGG 1 cut(s) 1243
BcoDI GTCTC 2 cut(s) 208, 308
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 2 cut(s) 15, 948
BfoI RGCGCY 1 cut(s) 1052
BfrI CTTAAG 1 cut(s) 341
BfuI GTATCC 2 cut(s) 36, 42
BglI GCCNNNNNGGC 1 cut(s) 1397
BisI GCNGC 2 cut(s) 144, 545
BlpI GCTNAGC 1 cut(s) 1401
BlsI GCNGC 2 cut(s) 145, 546
Bme1390I CCNGG 2 cut(s) 36, 1243
Bme18I GGWCC 1 cut(s) 752
BmgBI CACGTC 1 cut(s) 302
BmgT120I GGNCC 1 cut(s) 752
BmiI GGNNCC 3 cut(s) 972, 1050, 1143
BmrFI CCNGG 2 cut(s) 36, 1243
BpiI GAAGAC 1 cut(s) 1365
Bpu1102I GCTNAGC 1 cut(s) 1401
Bpu14I TTCGAA 1 cut(s) 291
BpuMI CCSGG 1 cut(s) 1243
BsaAI YACGTR 1 cut(s) 938
BsaHI GRCGYC 3 cut(s) 396, 519, 1049
BsaJI CCNNGG 4 cut(s) 57, 888, 1356, 1386
BsaWI WCCGGW 1 cut(s) 961
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 41, 447, 1242, 1302
Bse118I RCCGGY 1 cut(s) 961
Bse1I ACTGG 2 cut(s) 162, 1345
Bse21I CCTNAGG 1 cut(s) 1053
Bse3DI GCAATG 2 cut(s) 138, 570
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 4 cut(s) 57, 888, 1356, 1386
BseGI GGATG 4 cut(s) 318, 414, 471, 1312
BseLI CCNNNNNNNGG 5 cut(s) 35, 41, 447, 1242, 1302
BseMI GCAATG 2 cut(s) 138, 570
BseMII CTCAG 4 cut(s) 777, 1067, 1081, 1415
BseNI ACTGG 2 cut(s) 162, 1345
BseRI GAGGAG 2 cut(s) 983, 1217
BseXI GCAGC 1 cut(s) 155
BseYI CCCAGC 1 cut(s) 1180
Bsh1236I CGCG 2 cut(s) 128, 401
BshFI GGCC 6 cut(s) 45, 887, 915, 1159, 1355, 1391
BshNI GGYRCC 2 cut(s) 1048, 1141
BshTI ACCGGT 1 cut(s) 961
BsiSI CCGG 2 cut(s) 962, 1242
BslFI GGGAC 1 cut(s) 1041
BslI CCNNNNNNNGG 5 cut(s) 35, 41, 447, 1242, 1302
BsmAI GTCTC 2 cut(s) 208, 308
BsmBI CGTCTC 2 cut(s) 208, 308
BsmFI GGGAC 1 cut(s) 1041
BsnI GGCC 6 cut(s) 45, 887, 915, 1159, 1355, 1391
Bsp119I TTCGAA 1 cut(s) 291
Bsp1286I GDGCHC 1 cut(s) 688
Bsp143I GATC 4 cut(s) 175, 667, 738, 759
Bsp1720I GCTNAGC 1 cut(s) 1401
Bsp19I CCATGG 2 cut(s) 57, 888
Bsp68I TCGCGA 1 cut(s) 401
BspACI CCGC 8 cut(s) 126, 150, 441, 545, 586, 1086, 1256, 1368
BspANI GGCC 6 cut(s) 45, 887, 915, 1159, 1355, 1391
BspCNI CTCAG 4 cut(s) 776, 1066, 1080, 1414
BspFNI CGCG 2 cut(s) 128, 401
BspHI TCATGA 1 cut(s) 1072
BspLI GGNNCC 3 cut(s) 972, 1050, 1143
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 2 cut(s) 1048, 1141
BspTI CTTAAG 1 cut(s) 341
BsrBI CCGCTC 1 cut(s) 588
BsrDI GCAATG 2 cut(s) 138, 570
BsrFI RCCGGY 1 cut(s) 961
BsrI ACTGG 2 cut(s) 162, 1345
BssAI RCCGGY 1 cut(s) 961
BssECI CCNNGG 4 cut(s) 57, 888, 1356, 1386
BssMI GATC 4 cut(s) 175, 667, 738, 759
BssNI GRCGYC 3 cut(s) 396, 519, 1049
BssT1I CCWWGG 4 cut(s) 57, 888, 1356, 1386
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 6 cut(s) 500, 711, 748, 756, 879, 1103
Bst6I CTCTTC 4 cut(s) 261, 672, 764, 948
BstACI GRCGYC 3 cut(s) 396, 519, 1049
BstAFI CTTAAG 1 cut(s) 341
BstBAI YACGTR 1 cut(s) 938
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 3 cut(s) 166, 542, 716
BstDEI CTNAG 4 cut(s) 763, 1053, 1067, 1401
BstDSI CCRYGG 2 cut(s) 57, 888
BstF5I GGATG 4 cut(s) 318, 414, 471, 1312
BstFNI CGCG 2 cut(s) 128, 401
BstH2I RGCGCY 1 cut(s) 1052
BstHHI GCGC 2 cut(s) 130, 1051
BstKTI GATC 4 cut(s) 178, 670, 741, 762
BstMAI GTCTC 2 cut(s) 208, 308
BstMBI GATC 4 cut(s) 175, 667, 738, 759
BstMWI GCNNNNNNNGC 8 cut(s) 125, 149, 206, 692, 701, 1388, 1397, 1411
BstNI CCWGG 1 cut(s) 36
BstNSI RCATGY 2 cut(s) 376, 544
BstSCI CCNGG 2 cut(s) 34, 1241
BstSFI CTRYAG 2 cut(s) 15, 948
BstSNI TACGTA 1 cut(s) 938
BstUI CGCG 2 cut(s) 128, 401
BstV1I GCAGC 1 cut(s) 155
BstV2I GAAGAC 1 cut(s) 1365
Bsu36I CCTNAGG 1 cut(s) 1053
BsuI GTATCC 2 cut(s) 36, 42
BsuRI GGCC 6 cut(s) 45, 887, 915, 1159, 1355, 1391
BtgI CCRYGG 2 cut(s) 57, 888
BtgZI GCGATG 1 cut(s) 470
BtrI CACGTC 1 cut(s) 302
BtsCI GGATG 4 cut(s) 318, 414, 471, 1312
BtsI GCAGTG 1 cut(s) 1134
BtsIMutI CAGTG 2 cut(s) 1099, 1134
BtuMI TCGCGA 1 cut(s) 401
Cac8I GCNNGC 3 cut(s) 166, 542, 716
CciI TCATGA 1 cut(s) 1072
CfoI GCGC 2 cut(s) 130, 1051
Cfr10I RCCGGY 1 cut(s) 961
Cfr13I GGNCC 1 cut(s) 752
CpoI CGGWCCG 1 cut(s) 752
CseI GACGC 1 cut(s) 392
Csp6I GTAC 3 cut(s) 935, 1064, 1165
CspAI ACCGGT 1 cut(s) 961
CspI CGGWCCG 1 cut(s) 752
CviAII CATG 8 cut(s) 58, 373, 541, 631, 791, 856, 889, 1073
CviQI GTAC 3 cut(s) 935, 1064, 1165
DdeI CTNAG 4 cut(s) 763, 1053, 1067, 1401
DinI GGCGCC 1 cut(s) 1050
DpnI GATC 4 cut(s) 177, 669, 740, 761
DpnII GATC 4 cut(s) 175, 667, 738, 759
EaeI YGGCCR 2 cut(s) 913, 1389
Eam1104I CTCTTC 4 cut(s) 261, 672, 764, 948
EarI CTCTTC 4 cut(s) 261, 672, 764, 948
Eco105I TACGTA 1 cut(s) 938
Eco130I CCWWGG 4 cut(s) 57, 888, 1356, 1386
Eco24I GRGCYC 1 cut(s) 688
Eco47I GGWCC 1 cut(s) 752
Eco81I CCTNAGG 1 cut(s) 1053
EcoRII CCWGG 1 cut(s) 34
EcoT14I CCWWGG 4 cut(s) 57, 888, 1356, 1386
EcoT38I GRGCYC 1 cut(s) 688
EgeI GGCGCC 1 cut(s) 1050
EheI GGCGCC 1 cut(s) 1050
ErhI CCWWGG 4 cut(s) 57, 888, 1356, 1386
Esp3I CGTCTC 2 cut(s) 208, 308
FaeI CATG 8 cut(s) 61, 376, 544, 634, 794, 859, 892, 1076
FaqI GGGAC 1 cut(s) 1041
FatI CATG 8 cut(s) 57, 372, 540, 630, 790, 855, 888, 1072
FauI CCCGC 2 cut(s) 1079, 1361
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 2 cut(s) 144, 545
FokI GGATG 4 cut(s) 305, 401, 458, 1319
FriOI GRGCYC 1 cut(s) 688
Fsp4HI GCNGC 2 cut(s) 144, 545
FspBI CTAG 1 cut(s) 41
GlaI GCGC 2 cut(s) 129, 1050
GluI GCNGC 2 cut(s) 144, 545
GsaI CCCAGC 1 cut(s) 1184
HaeII RGCGCY 1 cut(s) 1052
HaeIII GGCC 6 cut(s) 45, 887, 915, 1159, 1355, 1391
HapII CCGG 2 cut(s) 962, 1242
HgaI GACGC 1 cut(s) 392
HhaI GCGC 2 cut(s) 130, 1051
Hin1I GRCGYC 3 cut(s) 396, 519, 1049
Hin1II CATG 8 cut(s) 61, 376, 544, 634, 794, 859, 892, 1076
Hin6I GCGC 2 cut(s) 128, 1049
HinP1I GCGC 2 cut(s) 128, 1049
HincII GTYRAC 1 cut(s) 183
HindII GTYRAC 1 cut(s) 183
HinfI GANTC 7 cut(s) 451, 550, 648, 1076, 1096, 1232, 1292
HpaII CCGG 2 cut(s) 962, 1242
HphI GGTGA 5 cut(s) 20, 80, 736, 1048, 1237
Hpy166II GTNNAC 1 cut(s) 183
Hpy188I TCNGA 5 cut(s) 508, 738, 752, 851, 1237
Hpy188III TCNNGA 6 cut(s) 260, 271, 400, 523, 1073, 1093
Hpy8I GTNNAC 1 cut(s) 183
Hpy99I CGWCG 5 cut(s) 386, 398, 401, 521, 752
HpyAV CCTTC 6 cut(s) 105, 441, 490, 1204, 1345, 1358
HpyCH4III ACNGT 6 cut(s) 500, 711, 748, 756, 879, 1103
HpyCH4IV ACGT 5 cut(s) 301, 396, 519, 662, 937
HpyCH4V TGCA 2 cut(s) 143, 299
HpyF10VI GCNNNNNNNGC 8 cut(s) 125, 149, 206, 692, 701, 1388, 1397, 1411
HpyF3I CTNAG 4 cut(s) 763, 1053, 1067, 1401
HpySE526I ACGT 5 cut(s) 301, 396, 519, 662, 937
Hsp92I GRCGYC 3 cut(s) 396, 519, 1049
Hsp92II CATG 8 cut(s) 61, 376, 544, 634, 794, 859, 892, 1076
HspAI GCGC 2 cut(s) 128, 1049
KasI GGCGCC 1 cut(s) 1048
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 4 cut(s) 175, 667, 738, 759
LmnI GCTCC 2 cut(s) 173, 970
Lsp1109I GCAGC 1 cut(s) 155
MaeI CTAG 1 cut(s) 41
MaeII ACGT 5 cut(s) 301, 396, 519, 662, 937
MaeIII GTNAC 2 cut(s) 957, 1093
MalI GATC 4 cut(s) 177, 669, 740, 761
MbiI CCGCTC 1 cut(s) 588
MboI GATC 4 cut(s) 175, 667, 738, 759
MboII GAAGA 8 cut(s) 243, 248, 689, 733, 781, 965, 1365, 1373
MhlI GDGCHC 1 cut(s) 688
MlsI TGGCCA 2 cut(s) 915, 1391
MluCI AATT 2 cut(s) 51, 595
MluNI TGGCCA 2 cut(s) 915, 1391
Mly113I GGCGCC 1 cut(s) 1049
MlyI GAGTC 5 cut(s) 460, 1070, 1090, 1241, 1286
MmeI TCCRAC 3 cut(s) 730, 861, 1245
Mox20I TGGCCA 2 cut(s) 915, 1391
MscI TGGCCA 2 cut(s) 915, 1391
MseI TTAA 1 cut(s) 342
MslI CAYNNNNRTG 1 cut(s) 860
Msp20I TGGCCA 2 cut(s) 915, 1391
MspA1I CMGCKG 1 cut(s) 1405
MspCI CTTAAG 1 cut(s) 341
MspI CCGG 2 cut(s) 962, 1242
MspR9I CCNGG 2 cut(s) 36, 1243
MvaI CCWGG 1 cut(s) 36
MvnI CGCG 2 cut(s) 128, 401
MwoI GCNNNNNNNGC 8 cut(s) 125, 149, 206, 692, 701, 1388, 1397, 1411
NarI GGCGCC 1 cut(s) 1049
NciI CCSGG 1 cut(s) 1243
NcoI CCATGG 2 cut(s) 57, 888
NdeII GATC 4 cut(s) 175, 667, 738, 759
NlaIII CATG 8 cut(s) 61, 376, 544, 634, 794, 859, 892, 1076
NlaIV GGNNCC 3 cut(s) 972, 1050, 1143
NmeAIII GCCGAG 1 cut(s) 1195
NmuCI GTSAC 1 cut(s) 1093
NruI TCGCGA 1 cut(s) 401
NspI RCATGY 2 cut(s) 376, 544
NspV TTCGAA 1 cut(s) 291
PaeI GCATGC 1 cut(s) 544
PagI TCATGA 1 cut(s) 1072
PciI ACATGT 1 cut(s) 372
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PfeI GAWTC 2 cut(s) 550, 648
PfoI TCCNGGA 1 cut(s) 34
PinAI ACCGGT 1 cut(s) 961
PkrI GCNGC 2 cut(s) 145, 546
PleI GAGTC 5 cut(s) 459, 1070, 1090, 1240, 1286
PluTI GGCGCC 1 cut(s) 1052
PpsI GAGTC 5 cut(s) 459, 1070, 1090, 1240, 1286
Ppu21I YACGTR 1 cut(s) 938
PscI ACATGT 1 cut(s) 372
Psp6I CCWGG 1 cut(s) 34
PspFI CCCAGC 1 cut(s) 1180
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 3 cut(s) 972, 1050, 1143
PspPI GGNCC 1 cut(s) 752
PvuII CAGCTG 1 cut(s) 1405
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 3 cut(s) 936, 1065, 1166
RsaNI GTAC 3 cut(s) 935, 1064, 1165
RseI CAYNNNNRTG 1 cut(s) 860
Rsr2I CGGWCCG 1 cut(s) 752
RsrII CGGWCCG 1 cut(s) 752
SaqAI TTAA 1 cut(s) 342
SatI GCNGC 2 cut(s) 144, 545
Sau3AI GATC 4 cut(s) 175, 667, 738, 759
Sau96I GGNCC 1 cut(s) 752
SchI GAGTC 5 cut(s) 460, 1070, 1090, 1241, 1286
ScrFI CCNGG 2 cut(s) 36, 1243
SduI GDGCHC 1 cut(s) 688
SfcI CTRYAG 2 cut(s) 15, 948
SfoI GGCGCC 1 cut(s) 1050
SfuI TTCGAA 1 cut(s) 291
SinI GGWCC 1 cut(s) 752
SmiMI CAYNNNNRTG 1 cut(s) 860
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
SnaBI TACGTA 1 cut(s) 938
SphI GCATGC 1 cut(s) 544
Sse9I AATT 2 cut(s) 51, 595
SsiI CCGC 8 cut(s) 126, 150, 441, 545, 586, 1086, 1256, 1368
SspDI GGCGCC 1 cut(s) 1048
SspI AATATT 1 cut(s) 990
SspMI CTAG 1 cut(s) 41
StyD4I CCNGG 2 cut(s) 34, 1241
StyI CCWWGG 4 cut(s) 57, 888, 1356, 1386
TaaI ACNGT 6 cut(s) 500, 711, 748, 756, 879, 1103
TaiI ACGT 5 cut(s) 304, 399, 522, 665, 940
TaqI TCGA 5 cut(s) 270, 291, 369, 393, 617
TasI AATT 2 cut(s) 51, 595
TauI GCSGC 1 cut(s) 547
TfiI GAWTC 2 cut(s) 550, 648
Tru1I TTAA 1 cut(s) 342
Tru9I TTAA 1 cut(s) 342
TscAI CASTG 2 cut(s) 1106, 1134
TseFI GTSAC 1 cut(s) 1093
TseI GCWGC 1 cut(s) 143
Tsp45I GTSAC 1 cut(s) 1093
TspDTI ATGAA 2 cut(s) 1223, 1323
TspGWI ACGGA 1 cut(s) 18
TspRI CASTG 2 cut(s) 1106, 1134
Vha464I CTTAAG 1 cut(s) 341
VpaK11BI GGWCC 1 cut(s) 752
XceI RCATGY 2 cut(s) 376, 544
XcmI CCANNNNNNNNNTGG 1 cut(s) 154
XspI CTAG 1 cut(s) 41
ZraI GACGTC 2 cut(s) 397, 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.