Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002368

Physical Location & Seq

Genomic Coordinates Reverse (-)

2856144 .. 2860245

Gene Structure 4102 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGCAATTCTTCGGCGGAACAGAGATAAGCCCGTCGCTGCCGGCGGCGACGGCGTCGGGAAACAACGGGCACATGATGTACGTCTTCAACCGCAACGGCGTCTGCTTGCTCTACCGAGAATGGAATCGCCCTCTCCACACCCTCAACGCTCAACAAGATCACAAGCTCATGTTCGGCCTCCTCTTCTCCCTCAAGTCCTTGACCGCTAAGATGGACCCCACGGCTGTGGAGAAAGGGAACCTAGGAGTGCCTCAATTGCCTGGTCAGGGCTGTTCGTTTCATAGCTTTCGGACCAATACCTACAAGCTTAGCTTCATGGAGAGCCCTTCTGGTATAAAGATTATATTGATTACGCATCCTAGGACTGGGGATTTGCGGGAGTCTTTGAAGTACATTTACAACTTGTATGTTGAGTATGTTGTGAAGAACCCACTCTATACTCCTGGAACTCCTATCAGTGAAAAGCAAAAGCAGAACGAGACTGTATTTATATGGAAAACAGAGACTTTAAAGAAACGCATTTTCCATCACCACCAGCAAAGACAGAGCAGAGCCATGGAGGCGATTGTTTTATACCCATCACCACCTATTGGCCACTTGGTTTCCATGGTAGAGTTGGGCAAATTCATACTTACTTGCCATCCTTCATGTAGCATCCACATACTTATCACCACCCCACCTTACAGAGCCGATGACACCGCCCCATATATTGCCTCTGTCTCTGCCACTACTCCCTCCATCATCTTCCACCATCTCCCAACTATCTCTCTTCCTCCCTCGTCCACTTCCTCTCCCAACCATGAAACCCTAACCTTTGAGGTCCTTCGGCTCAACAACCCCAACGTCCACAAAGCCCTCCTTTCCATCTCCAACAACTTTATTGTTCAAGCTTTTATCATGGACTTCTTCTGTGGTCTTGGGCTTTCTGTTGCTATTGATCTGAATATCCCAGGATATTTTTTCTTCACATCTGGTGCAGGATGCCTAGCTTCCTTTCTGATACTCCCTGCTATTCACAAAAACACTGACAAGAGCCTCAAAGACCTTAACGCCCTTCTCTCTATTCCAGGAGTACCACCAATACCTTCCTCTGATATGCCAAAACCAGTTTTGGTACGTAGTGACAAGGCCTATGAGTGCTTCCTAGAAAACTCAACACAATTACTCAAATCAGCTGGGATTATCGTGAACACGTTTGAATCACTCGAGTCTAGGGCCATCAGAGCAATATCAGATGGACTATGCTTGCCTGAAGATGTTCCTACACCACCCATCTTTTGCATAGGTCCGTTAATCTTTGCTCACAATCAAAGAGGTGGTGGTAATGATGATGTGCCTGAGTGTTTGACATGGCTGGACTCACAGCCAAGTGGCAGTGTGGTCTTCCTCTGTTTTGGAAGCTTAGGATTGTTTACAAAGGAGCAGTTGGGGGAAATAGCTGCGGGGTTAGAGAGGAGTGGCCAAAGGTTCTTGTGGGTTGTCCGTAATCCACCTTCTCATAATCAAAGCGTTGCTATTGCAGGCCAAGTGGATCCGGATTTGGATTATTTGCTTCCAGATGGTTTTTTGGATAGAACTAAGGATAGGGGTCTTGTAGTGAAGTCATGGGCACCACAAGTGGCAGTGCTGAATCATGATTCTGTAGGTGGGTTTGTGAGTCACTGTGGGTGGAACTCGGTGTTGGAGGCAGTGTGTGCTGGGGTGCCAATTGTGTCCTGGCCACTCTATGCAGAGCAGAGATTTAATAGGGTTATTTTGGTGGAGGAAATAAATATTGCTTTGCCAATGAACGAGTCACTAGACGGTTTTGTAAATGCAACAGAGGTGGAGAAGCGAGTTAGAGAGTTGATGGACTCGGAGAAAGGAAAGTCAATCAGGAAGAGGACAAATGCTGCGAAGAGTGAAGCAAATGCTGCTCTGAGTGAAGCCGGGACATCTCGGATTGCATTAACTAAACTTGTCGAATCGTGGAATCAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044 GO:0080045 GO:0080046

KEGG Pathways

Metabolic & Signaling

ko00942 map00942

Pfam Domains

Protein Families

UDPGT

Protein Analysis

660

Amino Acids

72.7

Weight (kDa)

6.85

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sybindin	PF04099	24 - 153	1.3e-43	Sybindin-like family
UDPGT	PF00201	450 - 584	1.8e-21	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16520 AT3G16520 AT3G16520
fragaria_vesca	FvH4_1g30110 FvH4_7g30500 FvH4_7g30540
malus_domestica	MD01G1210600.v1.1 MD01G1210700.v1.1 MD07G1280800.v1.1 MD07G1281000.v1.1
prunus_persica	Prupe.2G303000_v2.0.a1
pyrus_communis	pycom01g22110 pycom07g25550
rosa_chinensis	RchiOBHm_Chr1g0378901 RchiOBHm_Chr1g0378931 RchiOBHm_Chr1g0378941
rosa_laevigata	RLG00000026407 RLG00000026408 RLG00000026410
rosa_multiflora	Rmu_sc0000556.1_g000032 Rmu_sc0000556.1_g000035 Rmu_sc0006761.1_g000001 Rmu_sc0006761.1_g000002
rosa_roxburghii	Rroxscaffold_4G00280260 Rroxscaffold_4G00280270 Rroxscaffold_4G00280280
rosa_rugosa	Rorug01G0411000 Rorug01G0411500 Rorug07G0124400
rosa_samantha	Rh1AG433800 Rh1BG391400 Rh1BG391600 Rh1CG404200 Rh1CG404400 Rh1DG422600 Rh1DG422800 Rh7BG250700
rosa_wichuraiana	Rw0G000080 Rw0G000090 Rw1G037860 Rw1G037880 Rw1G037890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1609, 1702
AccB7I	CCANNNNNTGG	1 cut(s)	590
AccIII	TCCGGA	1 cut(s)	1534
AciI	CCGC	7 cut(s)	15, 44, 91, 204, 376, 699, 1442
AclWI	GGATC	2 cut(s)	1526, 1539
AcoI	YGGCCR	3 cut(s)	592, 1459, 1718
AcsI	RAATTY	1 cut(s)	623
AcuI	CTGAAG	1 cut(s)	1272
AcyI	GRCGYC	2 cut(s)	53, 99
AfaI	GTAC	4 cut(s)	80, 392, 1074, 1116
AfiI	CCNNNNNNNGG	3 cut(s)	266, 365, 590
AflIII	ACRYGT	1 cut(s)	1191
AgsI	TTSAA	4 cut(s)	88, 388, 887, 1199
AjnI	CCWGG	5 cut(s)	259, 442, 949, 1066, 1715
AjuI	GAANNNNNNNTTGG	2 cut(s)	1664, 1696
AleI	CACNNNNGTG	1 cut(s)	224
AluBI	AGCT	9 cut(s)	166, 285, 307, 312, 890, 989, 1175, 1401, 1439
AluI	AGCT	9 cut(s)	166, 285, 307, 312, 890, 989, 1175, 1401, 1439
Alw26I	GTCTC	3 cut(s)	473, 497, 724
AlwI	GGATC	2 cut(s)	1526, 1539
Ama87I	CYCGRG	1 cut(s)	1205
Aor13HI	TCCGGA	1 cut(s)	1534
AoxI	GGCC	7 cut(s)	175, 592, 1128, 1215, 1459, 1522, 1718
ApeKI	GCWGC	4 cut(s)	37, 1439, 1892, 1913
ApoI	RAATTY	1 cut(s)	623
ArsI	GACNNNNNNTTYG	2 cut(s)	355, 387
Asp700I	GAANNNNTTC	1 cut(s)	1257
AspA2I	CCTAGG	2 cut(s)	241, 359
AspS9I	GGNCC	5 cut(s)	214, 291, 820, 1215, 1286
AsuC2I	CCSGG	1 cut(s)	1930
AsuHPI	GGTGA	3 cut(s)	521, 573, 661
AvaI	CYCGRG	1 cut(s)	1205
AvaII	GGWCC	4 cut(s)	214, 291, 820, 1286
AvrII	CCTAGG	2 cut(s)	241, 359
BaeGI	GKGCMC	2 cut(s)	72, 1612
BalI	TGGCCA	3 cut(s)	594, 1461, 1720
BamHI	GGATCC	1 cut(s)	1531
BanI	GGYRCC	2 cut(s)	1609, 1702
BanII	GRGCYC	1 cut(s)	326
BarI	GAAGNNNNNNTAC	4 cut(s)	380, 412, 1477, 1509
BbsI	GAAGAC	2 cut(s)	76, 1375
BbvI	GCAGC	4 cut(s)	24, 1426, 1879, 1900
BceAI	ACGGC	3 cut(s)	66, 112, 237
BciT130I	CCWGG	5 cut(s)	261, 444, 951, 1068, 1717
BcnI	CCSGG	1 cut(s)	1930
BcoDI	GTCTC	3 cut(s)	473, 497, 724
BfaI	CTAG	6 cut(s)	242, 360, 986, 1145, 1212, 1799
BfmI	CTRYAG	1 cut(s)	1641
BglI	GCCNNNNNGGC	1 cut(s)	560
BisI	GCNGC	5 cut(s)	38, 45, 1440, 1893, 1914
BlnI	CCTAGG	2 cut(s)	241, 359
BlpI	GCTNAGC	1 cut(s)	308
BlsI	GCNGC	5 cut(s)	39, 46, 1441, 1894, 1915
Bme1390I	CCNGG	6 cut(s)	261, 444, 951, 1068, 1717, 1930
Bme18I	GGWCC	4 cut(s)	214, 291, 820, 1286
BmeT110I	CYCGRG	1 cut(s)	1205
BmgT120I	GGNCC	5 cut(s)	214, 291, 820, 1215, 1286
BmiI	GGNNCC	5 cut(s)	216, 239, 1533, 1611, 1704
BmrFI	CCNGG	6 cut(s)	261, 444, 951, 1068, 1717, 1930
BmrI	ACTGGG	1 cut(s)	375
BmsI	GCATC	3 cut(s)	364, 663, 971
BmuI	ACTGGG	1 cut(s)	375
BpiI	GAAGAC	2 cut(s)	76, 1375
Bpu10I	CCTNAGC	1 cut(s)	1402
Bpu1102I	GCTNAGC	1 cut(s)	308
BpuEI	CTTGAG	1 cut(s)	176
BpuMI	CCSGG	1 cut(s)	1930
BsaAI	YACGTR	1 cut(s)	1118
BsaHI	GRCGYC	2 cut(s)	53, 99
BsaJI	CCNNGG	6 cut(s)	219, 241, 359, 555, 606, 949
BsaWI	WCCGGW	1 cut(s)	1534
BsaXI	ACNNNNNCTCC	4 cut(s)	775, 805, 1676, 1706
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 365, 590
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	2 cut(s)	370, 1106
BseAI	TCCGGA	1 cut(s)	1534
BseBI	CCWGG	5 cut(s)	261, 444, 951, 1068, 1717
BseDI	CCNNGG	6 cut(s)	219, 241, 359, 555, 606, 949
BseGI	GGATG	4 cut(s)	355, 640, 654, 986
BseLI	CCNNNNNNNGG	3 cut(s)	266, 365, 590
BseMII	CTCAG	2 cut(s)	1329, 1910
BseNI	ACTGG	2 cut(s)	370, 1106
BseRI	GAGGAG	2 cut(s)	170, 1468
BseSI	GKGCMC	2 cut(s)	72, 1612
BseXI	GCAGC	4 cut(s)	24, 1426, 1879, 1900
BseYI	CCCAGC	2 cut(s)	1175, 1697
BsgI	GTGCAG	1 cut(s)	996
BshFI	GGCC	7 cut(s)	177, 594, 1130, 1217, 1461, 1524, 1720
BshNI	GGYRCC	2 cut(s)	1609, 1702
BsiHKCI	CYCGRG	1 cut(s)	1205
BsiSI	CCGG	3 cut(s)	41, 1535, 1929
BslFI	GGGAC	1 cut(s)	1945
BslI	CCNNNNNNNGG	3 cut(s)	266, 365, 590
BsmAI	GTCTC	3 cut(s)	473, 497, 724
BsmFI	GGGAC	1 cut(s)	1945
BsnI	GGCC	7 cut(s)	177, 594, 1130, 1217, 1461, 1524, 1720
BsoBI	CYCGRG	1 cut(s)	1205
Bsp1286I	GDGCHC	3 cut(s)	72, 326, 1612
Bsp13I	TCCGGA	1 cut(s)	1534
Bsp143I	GATC	3 cut(s)	157, 937, 1531
Bsp1720I	GCTNAGC	1 cut(s)	308
Bsp19I	CCATGG	2 cut(s)	555, 606
BspACI	CCGC	7 cut(s)	15, 44, 91, 204, 376, 699, 1442
BspANI	GGCC	7 cut(s)	177, 594, 1130, 1217, 1461, 1524, 1720
BspCNI	CTCAG	2 cut(s)	1330, 1911
BspEI	TCCGGA	1 cut(s)	1534
BspHI	TCATGA	1 cut(s)	1633
BspLI	GGNNCC	5 cut(s)	216, 239, 1533, 1611, 1704
BspPI	GGATC	2 cut(s)	1526, 1539
BspT107I	GGYRCC	2 cut(s)	1609, 1702
BsrFI	RCCGGY	1 cut(s)	40
BsrI	ACTGG	2 cut(s)	370, 1106
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	6 cut(s)	219, 241, 359, 555, 606, 949
BssMI	GATC	3 cut(s)	157, 937, 1531
BssNI	GRCGYC	2 cut(s)	53, 99
BssT1I	CCWWGG	4 cut(s)	241, 359, 555, 606
Bst2UI	CCWGG	5 cut(s)	261, 444, 951, 1068, 1717
Bst4CI	ACNGT	3 cut(s)	484, 1664, 1805
Bst6I	CTCTTC	4 cut(s)	188, 774, 1874, 1892
BstACI	GRCGYC	2 cut(s)	53, 99
BstAPI	GCANNNNNTGC	2 cut(s)	1694, 1913
BstBAI	YACGTR	1 cut(s)	1118
BstC8I	GCNNGC	4 cut(s)	42, 107, 1247, 1522
BstDEI	CTNAG	6 cut(s)	207, 308, 1338, 1402, 1578, 1919
BstDSI	CCRYGG	3 cut(s)	219, 555, 606
BstF5I	GGATG	4 cut(s)	355, 640, 654, 986
BstKTI	GATC	3 cut(s)	160, 940, 1534
BstMAI	GTCTC	3 cut(s)	473, 497, 724
BstMBI	GATC	3 cut(s)	157, 937, 1531
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 256, 560, 1223, 1694, 1913
BstNI	CCWGG	5 cut(s)	261, 444, 951, 1068, 1717
BstSCI	CCNGG	6 cut(s)	259, 442, 949, 1066, 1715, 1928
BstSFI	CTRYAG	1 cut(s)	1641
BstSLI	GKGCMC	2 cut(s)	72, 1612
BstSNI	TACGTA	1 cut(s)	1118
BstV1I	GCAGC	4 cut(s)	24, 1426, 1879, 1900
BstV2I	GAAGAC	2 cut(s)	76, 1375
BstX2I	RGATCY	1 cut(s)	1531
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	1 cut(s)	1531
BsuRI	GGCC	7 cut(s)	177, 594, 1130, 1217, 1461, 1524, 1720
BtgI	CCRYGG	3 cut(s)	219, 555, 606
BtsCI	GGATG	4 cut(s)	355, 640, 654, 986
BtsI	GCAGTG	3 cut(s)	1381, 1629, 1695
BtsIMutI	CAGTG	6 cut(s)	463, 1023, 1381, 1629, 1660, 1695
Cac8I	GCNNGC	4 cut(s)	42, 107, 1247, 1522
CciI	TCATGA	1 cut(s)	1633
Cfr10I	RCCGGY	1 cut(s)	40
Cfr13I	GGNCC	5 cut(s)	214, 291, 820, 1215, 1286
CseI	GACGC	2 cut(s)	42, 88
Csp6I	GTAC	4 cut(s)	79, 391, 1073, 1115
CspCI	CAANNNNNGTGG	2 cut(s)	1806, 1841
CviQI	GTAC	4 cut(s)	79, 391, 1073, 1115
DdeI	CTNAG	6 cut(s)	207, 308, 1338, 1402, 1578, 1919
DpnI	GATC	3 cut(s)	159, 939, 1533
DpnII	GATC	3 cut(s)	157, 937, 1531
DraI	TTTAAA	1 cut(s)	510
EaeI	YGGCCR	3 cut(s)	592, 1459, 1718
Eam1104I	CTCTTC	4 cut(s)	188, 774, 1874, 1892
EarI	CTCTTC	4 cut(s)	188, 774, 1874, 1892
EciI	GGCGGA	1 cut(s)	30
Eco105I	TACGTA	1 cut(s)	1118
Eco130I	CCWWGG	4 cut(s)	241, 359, 555, 606
Eco147I	AGGCCT	1 cut(s)	1130
Eco24I	GRGCYC	1 cut(s)	326
Eco47I	GGWCC	4 cut(s)	214, 291, 820, 1286
Eco57I	CTGAAG	1 cut(s)	1272
Eco88I	CYCGRG	1 cut(s)	1205
EcoO109I	RGGNCCY	1 cut(s)	820
EcoRII	CCWGG	5 cut(s)	259, 442, 949, 1066, 1715
EcoT14I	CCWWGG	4 cut(s)	241, 359, 555, 606
EcoT38I	GRGCYC	1 cut(s)	326
ErhI	CCWWGG	4 cut(s)	241, 359, 555, 606
FalI	AAGNNNNNCTT	4 cut(s)	296, 328, 843, 875
FaqI	GGGAC	1 cut(s)	1945
FauI	CCCGC	2 cut(s)	369, 1435
Fnu4HI	GCNGC	5 cut(s)	38, 45, 1440, 1893, 1914
FokI	GGATG	4 cut(s)	342, 627, 641, 993
FriOI	GRGCYC	1 cut(s)	326
Fsp4HI	GCNGC	5 cut(s)	38, 45, 1440, 1893, 1914
FspBI	CTAG	6 cut(s)	242, 360, 986, 1145, 1212, 1799
GluI	GCNGC	5 cut(s)	38, 45, 1440, 1893, 1914
GsaI	CCCAGC	2 cut(s)	1179, 1701
HaeIII	GGCC	7 cut(s)	177, 594, 1130, 1217, 1461, 1524, 1720
HapII	CCGG	3 cut(s)	41, 1535, 1929
HgaI	GACGC	2 cut(s)	42, 88
Hin1I	GRCGYC	2 cut(s)	53, 99
HindIII	AAGCTT	3 cut(s)	305, 888, 1399
HpaII	CCGG	3 cut(s)	41, 1535, 1929
HphI	GGTGA	3 cut(s)	521, 573, 661
Hpy166II	GTNNAC	4 cut(s)	783, 847, 1189, 1413
Hpy188I	TCNGA	9 cut(s)	291, 942, 999, 1093, 1223, 1234, 1858, 1920, 1941
Hpy188III	TCNNGA	6 cut(s)	57, 1186, 1535, 1556, 1634, 1876
Hpy8I	GTNNAC	4 cut(s)	783, 847, 1189, 1413
Hpy99I	CGWCG	3 cut(s)	37, 52, 58
HpyAV	CCTTC	6 cut(s)	336, 654, 833, 1064, 1095, 1503
HpyCH4III	ACNGT	3 cut(s)	484, 1664, 1805
HpyCH4IV	ACGT	4 cut(s)	81, 843, 1117, 1193
HpyCH4V	TGCA	7 cut(s)	4, 977, 1281, 1520, 1730, 1817, 1946
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 256, 560, 1223, 1694, 1913
HpyF3I	CTNAG	6 cut(s)	207, 308, 1338, 1402, 1578, 1919
HpySE526I	ACGT	4 cut(s)	81, 843, 1117, 1193
Hsp92I	GRCGYC	2 cut(s)	53, 99
Kpn2I	TCCGGA	1 cut(s)	1534
KroI	GCCGGC	1 cut(s)	40
KroNI	GCCGGC	1 cut(s)	42
Kzo9I	GATC	3 cut(s)	157, 937, 1531
LmnI	GCTCC	1 cut(s)	1420
Lsp1109I	GCAGC	4 cut(s)	24, 1426, 1879, 1900
LweI	GCATC	3 cut(s)	364, 663, 971
MaeI	CTAG	6 cut(s)	242, 360, 986, 1145, 1212, 1799
MaeII	ACGT	4 cut(s)	81, 843, 1117, 1193
MaeIII	GTNAC	3 cut(s)	1121, 1658, 1794
MalI	GATC	3 cut(s)	159, 939, 1533
MboI	GATC	3 cut(s)	157, 937, 1531
MfeI	CAATTG	2 cut(s)	254, 1707
MflI	RGATCY	1 cut(s)	1531
MhlI	GDGCHC	3 cut(s)	72, 326, 1612
MlsI	TGGCCA	3 cut(s)	594, 1461, 1720
MluCI	AATT	5 cut(s)	5, 254, 623, 1160, 1707
MluNI	TGGCCA	3 cut(s)	594, 1461, 1720
MlyI	GAGTC	6 cut(s)	389, 1217, 1352, 1666, 1802, 1847
MmeI	TCCRAC	2 cut(s)	894, 1662
Mox20I	TGGCCA	3 cut(s)	594, 1461, 1720
MroI	TCCGGA	1 cut(s)	1534
MroNI	GCCGGC	1 cut(s)	40
MroXI	GAANNNNTTC	1 cut(s)	1257
MscI	TGGCCA	3 cut(s)	594, 1461, 1720
MseI	TTAA	5 cut(s)	509, 1047, 1292, 1743, 1949
MslI	CAYNNNNRTG	1 cut(s)	224
Msp20I	TGGCCA	3 cut(s)	594, 1461, 1720
MspA1I	CMGCKG	1 cut(s)	1175
MspI	CCGG	3 cut(s)	41, 1535, 1929
MspR9I	CCNGG	6 cut(s)	261, 444, 951, 1068, 1717, 1930
MunI	CAATTG	2 cut(s)	254, 1707
MvaI	CCWGG	5 cut(s)	261, 444, 951, 1068, 1717
MwoI	GCNNNNNNNGC	6 cut(s)	50, 256, 560, 1223, 1694, 1913
NaeI	GCCGGC	1 cut(s)	42
NciI	CCSGG	1 cut(s)	1930
NcoI	CCATGG	2 cut(s)	555, 606
NdeII	GATC	3 cut(s)	157, 937, 1531
NgoMIV	GCCGGC	1 cut(s)	40
NlaIV	GGNNCC	5 cut(s)	216, 239, 1533, 1611, 1704
NmuCI	GTSAC	3 cut(s)	1121, 1658, 1794
OliI	CACNNNNGTG	1 cut(s)	224
PaeR7I	CTCGAG	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	1633
PceI	AGGCCT	1 cut(s)	1130
PdiI	GCCGGC	1 cut(s)	42
PdmI	GAANNNNTTC	1 cut(s)	1257
PfeI	GAWTC	6 cut(s)	124, 1199, 1630, 1637, 1964, 1972
PflFI	GACNNNGTC	1 cut(s)	52
PflMI	CCANNNNNTGG	1 cut(s)	590
PfoI	TCCNGGA	2 cut(s)	442, 1066
PkrI	GCNGC	5 cut(s)	39, 46, 1441, 1894, 1915
PleI	GAGTC	6 cut(s)	388, 1216, 1352, 1665, 1801, 1847
PpsI	GAGTC	6 cut(s)	388, 1216, 1352, 1665, 1801, 1847
Ppu21I	YACGTR	1 cut(s)	1118
PpuMI	RGGWCCY	1 cut(s)	820
Psp5II	RGGWCCY	1 cut(s)	820
Psp6I	CCWGG	5 cut(s)	259, 442, 949, 1066, 1715
PspFI	CCCAGC	2 cut(s)	1175, 1697
PspGI	CCWGG	5 cut(s)	259, 442, 949, 1066, 1715
PspN4I	GGNNCC	5 cut(s)	216, 239, 1533, 1611, 1704
PspPI	GGNCC	5 cut(s)	214, 291, 820, 1215, 1286
PspPPI	RGGWCCY	1 cut(s)	820
PspXI	VCTCGAGB	1 cut(s)	1205
PsuI	RGATCY	1 cut(s)	1531
PsyI	GACNNNGTC	1 cut(s)	52
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	4 cut(s)	80, 392, 1074, 1116
RsaNI	GTAC	4 cut(s)	79, 391, 1073, 1115
RseI	CAYNNNNRTG	1 cut(s)	224
SaqAI	TTAA	5 cut(s)	509, 1047, 1292, 1743, 1949
SatI	GCNGC	5 cut(s)	38, 45, 1440, 1893, 1914
Sau3AI	GATC	3 cut(s)	157, 937, 1531
Sau96I	GGNCC	5 cut(s)	214, 291, 820, 1215, 1286
SchI	GAGTC	6 cut(s)	389, 1217, 1352, 1666, 1802, 1847
ScrFI	CCNGG	6 cut(s)	261, 444, 951, 1068, 1717, 1930
SduI	GDGCHC	3 cut(s)	72, 326, 1612
SfaNI	GCATC	3 cut(s)	364, 663, 971
SfcI	CTRYAG	1 cut(s)	1641
Sfr274I	CTCGAG	1 cut(s)	1205
SinI	GGWCC	4 cut(s)	214, 291, 820, 1286
SlaI	CTCGAG	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	224
SmlI	CTYRAG	2 cut(s)	191, 1205
SmoI	CTYRAG	2 cut(s)	191, 1205
SnaBI	TACGTA	1 cut(s)	1118
Sse9I	AATT	5 cut(s)	5, 254, 623, 1160, 1707
SseBI	AGGCCT	1 cut(s)	1130
SsiI	CCGC	7 cut(s)	15, 44, 91, 204, 376, 699, 1442
SspI	AATATT	1 cut(s)	1774
SspMI	CTAG	6 cut(s)	242, 360, 986, 1145, 1212, 1799
StuI	AGGCCT	1 cut(s)	1130
StyD4I	CCNGG	6 cut(s)	259, 442, 949, 1066, 1715, 1928
StyI	CCWWGG	4 cut(s)	241, 359, 555, 606
TaaI	ACNGT	3 cut(s)	484, 1664, 1805
TaiI	ACGT	4 cut(s)	84, 846, 1120, 1196
TaqI	TCGA	2 cut(s)	1206, 1962
TasI	AATT	5 cut(s)	5, 254, 623, 1160, 1707
TatI	WGTACW	1 cut(s)	390
TauI	GCSGC	1 cut(s)	47
TfiI	GAWTC	6 cut(s)	124, 1199, 1630, 1637, 1964, 1972
Tru1I	TTAA	5 cut(s)	509, 1047, 1292, 1743, 1949
Tru9I	TTAA	5 cut(s)	509, 1047, 1292, 1743, 1949
TscAI	CASTG	6 cut(s)	463, 1030, 1381, 1629, 1667, 1695
TseFI	GTSAC	3 cut(s)	1121, 1658, 1794
TseI	GCWGC	4 cut(s)	37, 1439, 1892, 1913
Tsp45I	GTSAC	3 cut(s)	1121, 1658, 1794
TspDTI	ATGAA	6 cut(s)	269, 304, 616, 636, 816, 1802
TspGWI	ACGGA	2 cut(s)	1278, 1472
TspRI	CASTG	6 cut(s)	463, 1030, 1381, 1629, 1667, 1695
Tth111I	GACNNNGTC	1 cut(s)	52
Van91I	CCANNNNNTGG	1 cut(s)	590
VpaK11BI	GGWCC	4 cut(s)	214, 291, 820, 1286
XapI	RAATTY	1 cut(s)	623
XcmI	CCANNNNNNNNNTGG	2 cut(s)	613, 1713
XhoI	CTCGAG	1 cut(s)	1205
XmaJI	CCTAGG	2 cut(s)	241, 359
XmnI	GAANNNNTTC	1 cut(s)	1257
XspI	CTAG	6 cut(s)	242, 360, 986, 1145, 1212, 1799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.