RLG00000026410

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
2834309 .. 2836550
2242 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026410

Sequence Viewer

Length: 1416 bp
ATGGATGCTATTCAGGCTATAGTTTTATACCCATCACCTCCTATAGGCCACTTGGTTTCTATGGTAGAGTTGGGCAAACTCATACTTACTCACCATCCTTCACTAAGCATCCACATAATCCTTGCCACTCCACCTTACAGAGCCGATGATACCGCCCCATACATTGCCTCTGTGTCTGCCACTACATCCTCCATCATCTTCCACCGCCTCCCCACTGTCTCTCTCCCTCCCTCCATCACTTCCGGCACACGCAACCATGAAACCCTAACCTTTGAAGTTCTCCGCCTCAACAACCCTCATGTCCACCAAGCCCTCCTTTCCATCTCCAACAGCTTCACTGTCCAAGCTTTTATCATGGACTTCTTCTGCGGTCTCGGACTTTCTGTTGCTACTGATCTGAACATCCCTGGTTACTTTTACTTAACAACTGGTGCAGGGTTCCTAGCTCCCTTCCTTTACCTTCCTACTATTCACAAAAACACTGACAAGAGCCTTAAAGACCTTGACACCCTTCTCTGTATTCCAGGAGTACCACCAGTACATTCCTTAGATATGCCGAAACCATTTCTTGAACGCAATGACAAGGCTTATGAATGCTTCCTAGAGAACTCAACCCACTCGACCAGATCAGCTGGGATTATCATAAACACTTTTGAATCACTTGAACCTAGAACTATCAGAGCACTATCAGATGGACTGTGCTTGCCTGATGATATTACCATGCCGCCCATCTACTGCATAGGACCGTTAATCATTTCTCAAAGAGGTGGACGCCGCGCTGATGTGCCTGAGTGTTTGACGTGGCTGGATTCACAGCCAAGTGGAAGTGTGGTCTTCCTTTGTTTTGGAAGCTTAGGATTGTTTACAAAGGAGCAGTTGGAGGAGATAGCTGTGGGGTTAGAGAGGAGTGGCCAAAGGTTCTTGTGGGTTGTTCGTAATCCACCTTCTCATAATCAAAGCGTGGCTATTGCAGGCCAAGTGGATCCGGATTTGGATTATTTAACCAAGGATAGGGGTCATGTGGTGAAGTCATGGGCGCCACAAGTAGAAGTTCTGAATCATGATTCAGTAGGTGGATTTGTGTGTCACTGTGGGTGGAACTCAATTTTGGAGGCGGTGTGTGCTGGGGTGCCAATGTTGGCCTGGCCACTCTATGCAGGGCAGAGATTAAATAGGGTCGTTTTGGTTGAGGAAATAAAGATTGCTCTGCCGGTGAACGAATCAAAAAGCGGGTTTGTGAGTGCAAATGAGGTTGAGAATCGAGTTAGAGAGTTGATGAACTCGGAGGAAGGAGAGTCAATCAGAAAGAAGATTGAGGTTCTGAGACGTGAAGCAAATGCTGCAGTGAGTGAAGGCGGGACATCTAAGATCGCATTAGCTAAACTGGTTGAATCATGGAATCAAGGCGTGGTCTAG

Protein Analysis

472

Amino Acids

51.6

Weight (kDa)

5.76

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 265 - 429 2.4e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1036, 1129
AccII CGCG 1 cut(s) 777
AccIII TCCGGA 1 cut(s) 985
AciI CCGC 9 cut(s) 153, 205, 283, 369, 725, 775, 1115, 1230, 1356
AclWI GGATC 2 cut(s) 977, 990
AcoI YGGCCR 2 cut(s) 910, 1145
AcyI GRCGYC 2 cut(s) 772, 1037
AfaI GTAC 2 cut(s) 531, 540
AfiI CCNNNNNNNGG 2 cut(s) 44, 1011
AgsI TTSAA 5 cut(s) 275, 572, 656, 665, 1391
AjiI CACGTC 2 cut(s) 801, 1328
AjnI CCWGG 3 cut(s) 406, 523, 1142
AjuI GAANNNNNNNTTGG 2 cut(s) 1091, 1123
AluBI AGCT 7 cut(s) 333, 347, 446, 632, 852, 890, 1379
AluI AGCT 7 cut(s) 333, 347, 446, 632, 852, 890, 1379
Alw21I GWGCWC 1 cut(s) 685
Alw26I GTCTC 3 cut(s) 223, 377, 1318
AlwI GGATC 2 cut(s) 977, 990
Aor13HI TCCGGA 1 cut(s) 985
AoxI GGCC 5 cut(s) 46, 910, 973, 1140, 1145
ApeKI GCWGC 1 cut(s) 1340
AspLEI GCGC 2 cut(s) 779, 1039
AspS9I GGNCC 1 cut(s) 743
AsuHPI GGTGA 4 cut(s) 27, 83, 1036, 1225
AvaII GGWCC 1 cut(s) 743
BalI TGGCCA 2 cut(s) 912, 1147
BamHI GGATCC 1 cut(s) 982
BanI GGYRCC 2 cut(s) 1036, 1129
BarI GAAGNNNNNNTAC 2 cut(s) 928, 960
BbsI GAAGAC 1 cut(s) 826
Bbv12I GWGCWC 1 cut(s) 685
BbvI GCAGC 1 cut(s) 1327
BccI CCATC 7 cut(s) 40, 102, 200, 242, 329, 686, 737
BciT130I CCWGG 3 cut(s) 408, 525, 1144
BcoDI GTCTC 3 cut(s) 223, 377, 1318
BfaI CTAG 4 cut(s) 443, 602, 669, 1414
BfmI CTRYAG 3 cut(s) 18, 42, 1341
BfoI RGCGCY 1 cut(s) 1040
BisI GCNGC 3 cut(s) 725, 775, 1341
BlsI GCNGC 3 cut(s) 726, 776, 1342
Bme1390I CCNGG 3 cut(s) 408, 525, 1144
Bme18I GGWCC 1 cut(s) 743
BmgBI CACGTC 2 cut(s) 801, 1328
BmgT120I GGNCC 1 cut(s) 743
BmiI GGNNCC 4 cut(s) 440, 984, 1038, 1131
BmrFI CCNGG 3 cut(s) 408, 525, 1144
BmsI GCATC 1 cut(s) 117
BpiI GAAGAC 1 cut(s) 826
Bpu10I CCTNAGC 1 cut(s) 853
BsaHI GRCGYC 2 cut(s) 772, 1037
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 2 cut(s) 406, 1005
BsaWI WCCGGW 1 cut(s) 985
BsaXI ACNNNNNCTCC 2 cut(s) 1103, 1133
Bsc4I CCNNNNNNNGG 2 cut(s) 44, 1011
Bse118I RCCGGY 1 cut(s) 1210
Bse1I ACTGG 3 cut(s) 433, 536, 1389
Bse3DI GCAATG 2 cut(s) 162, 583
BseAI TCCGGA 1 cut(s) 985
BseBI CCWGG 3 cut(s) 408, 525, 1144
BseDI CCNNGG 2 cut(s) 406, 1005
BseGI GGATG 5 cut(s) 10, 94, 108, 185, 402
BseLI CCNNNNNNNGG 2 cut(s) 44, 1011
BseMI GCAATG 2 cut(s) 162, 583
BseMII CTCAG 2 cut(s) 780, 1313
BseNI ACTGG 3 cut(s) 433, 536, 1389
BseRI GAGGAG 2 cut(s) 896, 919
BseXI GCAGC 1 cut(s) 1327
BseYI CCCAGC 2 cut(s) 632, 1124
BsgI GTGCAG 1 cut(s) 453
Bsh1236I CGCG 1 cut(s) 777
BshFI GGCC 5 cut(s) 48, 912, 975, 1142, 1147
BshNI GGYRCC 2 cut(s) 1036, 1129
BsiHKAI GWGCWC 1 cut(s) 685
BsiSI CCGG 3 cut(s) 243, 986, 1211
BslFI GGGAC 1 cut(s) 1372
BslI CCNNNNNNNGG 2 cut(s) 44, 1011
BsmAI GTCTC 3 cut(s) 223, 377, 1318
BsmBI CGTCTC 1 cut(s) 1318
BsmFI GGGAC 1 cut(s) 1372
BsmI GAATGC 1 cut(s) 599
BsnI GGCC 5 cut(s) 48, 912, 975, 1142, 1147
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 1 cut(s) 685
Bsp13I TCCGGA 1 cut(s) 985
Bsp143I GATC 4 cut(s) 394, 626, 982, 1368
BspACI CCGC 9 cut(s) 153, 205, 283, 369, 725, 775, 1115, 1230, 1356
BspANI GGCC 5 cut(s) 48, 912, 975, 1142, 1147
BspCNI CTCAG 2 cut(s) 781, 1314
BspEI TCCGGA 1 cut(s) 985
BspFNI CGCG 1 cut(s) 777
BspHI TCATGA 1 cut(s) 1060
BspLI GGNNCC 4 cut(s) 440, 984, 1038, 1131
BspMAI CTGCAG 1 cut(s) 1345
BspPI GGATC 2 cut(s) 977, 990
BspT107I GGYRCC 2 cut(s) 1036, 1129
BspTNI GGTCTC 1 cut(s) 377
BsrDI GCAATG 2 cut(s) 162, 583
BsrFI RCCGGY 1 cut(s) 1210
BsrI ACTGG 3 cut(s) 433, 536, 1389
BssAI RCCGGY 1 cut(s) 1210
BssECI CCNNGG 2 cut(s) 406, 1005
BssMI GATC 4 cut(s) 394, 626, 982, 1368
BssNI GRCGYC 2 cut(s) 772, 1037
BssT1I CCWWGG 1 cut(s) 1005
Bst2UI CCWGG 3 cut(s) 408, 525, 1144
Bst4CI ACNGT 5 cut(s) 217, 340, 699, 747, 1091
BstACI GRCGYC 2 cut(s) 772, 1037
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstC8I GCNNGC 2 cut(s) 704, 973
BstDEI CTNAG 6 cut(s) 104, 547, 789, 853, 1322, 1365
BstENI CCTNNNNNAGG 1 cut(s) 42
BstF5I GGATG 5 cut(s) 10, 94, 108, 185, 402
BstFNI CGCG 1 cut(s) 777
BstH2I RGCGCY 1 cut(s) 1040
BstHHI GCGC 2 cut(s) 779, 1039
BstKTI GATC 4 cut(s) 397, 629, 985, 1371
BstMAI GTCTC 3 cut(s) 223, 377, 1318
BstMBI GATC 4 cut(s) 394, 626, 982, 1368
BstMWI GCNNNNNNNGC 3 cut(s) 14, 1121, 1340
BstNI CCWGG 3 cut(s) 408, 525, 1144
BstSCI CCNGG 3 cut(s) 406, 523, 1142
BstSFI CTRYAG 3 cut(s) 18, 42, 1341
BstUI CGCG 1 cut(s) 777
BstV1I GCAGC 1 cut(s) 1327
BstV2I GAAGAC 1 cut(s) 826
BstX2I RGATCY 1 cut(s) 982
BstYI RGATCY 1 cut(s) 982
BsuRI GGCC 5 cut(s) 48, 912, 975, 1142, 1147
BtrI CACGTC 2 cut(s) 801, 1328
BtsCI GGATG 5 cut(s) 10, 94, 108, 185, 402
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 5 cut(s) 213, 336, 480, 1087, 1350
Cac8I GCNNGC 2 cut(s) 704, 973
CciI TCATGA 1 cut(s) 1060
CfoI GCGC 2 cut(s) 779, 1039
Cfr10I RCCGGY 1 cut(s) 1210
Cfr13I GGNCC 1 cut(s) 743
CseI GACGC 1 cut(s) 780
Csp6I GTAC 2 cut(s) 530, 539
CviAII CATG 8 cut(s) 257, 299, 355, 721, 1019, 1032, 1061, 1395
CviQI GTAC 2 cut(s) 530, 539
DdeI CTNAG 6 cut(s) 104, 547, 789, 853, 1322, 1365
DinI GGCGCC 1 cut(s) 1038
DpnI GATC 4 cut(s) 396, 628, 984, 1370
DpnII GATC 4 cut(s) 394, 626, 982, 1368
EaeI YGGCCR 2 cut(s) 910, 1145
EciI GGCGGA 1 cut(s) 272
Eco130I CCWWGG 1 cut(s) 1005
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 1 cut(s) 743
EcoNI CCTNNNNNAGG 1 cut(s) 42
EcoRII CCWGG 3 cut(s) 406, 523, 1142
EcoT14I CCWWGG 1 cut(s) 1005
EgeI GGCGCC 1 cut(s) 1038
EheI GGCGCC 1 cut(s) 1038
ErhI CCWWGG 1 cut(s) 1005
Esp3I CGTCTC 1 cut(s) 1318
FaeI CATG 8 cut(s) 260, 302, 358, 724, 1022, 1035, 1064, 1398
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FaqI GGGAC 1 cut(s) 1372
FatI CATG 8 cut(s) 256, 298, 354, 720, 1018, 1031, 1060, 1394
FauI CCCGC 2 cut(s) 1223, 1349
Fnu4HI GCNGC 3 cut(s) 725, 775, 1341
FokI GGATG 5 cut(s) 17, 81, 95, 172, 389
Fsp4HI GCNGC 3 cut(s) 725, 775, 1341
FspBI CTAG 4 cut(s) 443, 602, 669, 1414
GlaI GCGC 2 cut(s) 778, 1038
GluI GCNGC 3 cut(s) 725, 775, 1341
GsaI CCCAGC 2 cut(s) 636, 1128
HaeII RGCGCY 1 cut(s) 1040
HaeIII GGCC 5 cut(s) 48, 912, 975, 1142, 1147
HapII CCGG 3 cut(s) 243, 986, 1211
HgaI GACGC 1 cut(s) 780
HhaI GCGC 2 cut(s) 779, 1039
Hin1I GRCGYC 2 cut(s) 772, 1037
Hin1II CATG 8 cut(s) 260, 302, 358, 724, 1022, 1035, 1064, 1398
Hin6I GCGC 2 cut(s) 777, 1037
HinP1I GCGC 2 cut(s) 777, 1037
HindIII AAGCTT 2 cut(s) 345, 850
HinfI GANTC 9 cut(s) 656, 809, 1057, 1064, 1220, 1258, 1295, 1391, 1399
HpaII CCGG 3 cut(s) 243, 986, 1211
HphI GGTGA 4 cut(s) 27, 83, 1036, 1225
Hpy166II GTNNAC 4 cut(s) 304, 770, 864, 1216
Hpy188I TCNGA 8 cut(s) 377, 399, 680, 691, 1056, 1285, 1304, 1323
Hpy188III TCNNGA 3 cut(s) 569, 986, 1061
Hpy8I GTNNAC 4 cut(s) 304, 770, 864, 1216
HpyAV CCTTC 7 cut(s) 108, 460, 470, 521, 954, 1283, 1346
HpyCH4III ACNGT 5 cut(s) 217, 340, 699, 747, 1091
HpyCH4IV ACGT 2 cut(s) 800, 1327
HpyCH4V TGCA 6 cut(s) 434, 738, 971, 1157, 1244, 1343
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 1121, 1340
HpyF3I CTNAG 6 cut(s) 104, 547, 789, 853, 1322, 1365
HpySE526I ACGT 2 cut(s) 800, 1327
Hsp92I GRCGYC 2 cut(s) 772, 1037
Hsp92II CATG 8 cut(s) 260, 302, 358, 724, 1022, 1035, 1064, 1398
HspAI GCGC 2 cut(s) 777, 1037
KasI GGCGCC 1 cut(s) 1036
Kpn2I TCCGGA 1 cut(s) 985
Kzo9I GATC 4 cut(s) 394, 626, 982, 1368
LmnI GCTCC 2 cut(s) 451, 871
Lsp1109I GCAGC 1 cut(s) 1327
LweI GCATC 1 cut(s) 117
MaeI CTAG 4 cut(s) 443, 602, 669, 1414
MaeII ACGT 2 cut(s) 800, 1327
MaeIII GTNAC 2 cut(s) 410, 1085
MalI GATC 4 cut(s) 396, 628, 984, 1370
MboI GATC 4 cut(s) 394, 626, 982, 1368
MboII GAAGA 4 cut(s) 190, 355, 826, 1321
MflI RGATCY 1 cut(s) 982
MhlI GDGCHC 1 cut(s) 685
MlsI TGGCCA 2 cut(s) 912, 1147
MluCI AATT 1 cut(s) 1104
MluNI TGGCCA 2 cut(s) 912, 1147
Mly113I GGCGCC 1 cut(s) 1037
MlyI GAGTC 1 cut(s) 1304
MmeI TCCRAC 2 cut(s) 351, 858
Mox20I TGGCCA 2 cut(s) 912, 1147
MroI TCCGGA 1 cut(s) 985
MscI TGGCCA 2 cut(s) 912, 1147
MseI TTAA 5 cut(s) 422, 495, 749, 1001, 1169
Msp20I TGGCCA 2 cut(s) 912, 1147
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 3 cut(s) 243, 986, 1211
MspR9I CCNGG 3 cut(s) 408, 525, 1144
Mva1269I GAATGC 1 cut(s) 599
MvaI CCWGG 3 cut(s) 408, 525, 1144
MvnI CGCG 1 cut(s) 777
MwoI GCNNNNNNNGC 3 cut(s) 14, 1121, 1340
NarI GGCGCC 1 cut(s) 1037
NdeII GATC 4 cut(s) 394, 626, 982, 1368
NlaIII CATG 8 cut(s) 260, 302, 358, 724, 1022, 1035, 1064, 1398
NlaIV GGNNCC 4 cut(s) 440, 984, 1038, 1131
NmuCI GTSAC 1 cut(s) 1085
PagI TCATGA 1 cut(s) 1060
PctI GAATGC 1 cut(s) 599
PfeI GAWTC 8 cut(s) 656, 809, 1057, 1064, 1220, 1258, 1391, 1399
PfoI TCCNGGA 1 cut(s) 523
PkrI GCNGC 3 cut(s) 726, 776, 1342
PleI GAGTC 1 cut(s) 1303
PluTI GGCGCC 1 cut(s) 1040
PpsI GAGTC 1 cut(s) 1303
Psp6I CCWGG 3 cut(s) 406, 523, 1142
PspFI CCCAGC 2 cut(s) 632, 1124
PspGI CCWGG 3 cut(s) 406, 523, 1142
PspN4I GGNNCC 4 cut(s) 440, 984, 1038, 1131
PspPI GGNCC 1 cut(s) 743
PstI CTGCAG 1 cut(s) 1345
PsuI RGATCY 1 cut(s) 982
PvuII CAGCTG 1 cut(s) 632
RsaI GTAC 2 cut(s) 531, 540
RsaNI GTAC 2 cut(s) 530, 539
SaqAI TTAA 5 cut(s) 422, 495, 749, 1001, 1169
SatI GCNGC 3 cut(s) 725, 775, 1341
Sau3AI GATC 4 cut(s) 394, 626, 982, 1368
Sau96I GGNCC 1 cut(s) 743
SchI GAGTC 1 cut(s) 1304
ScrFI CCNGG 3 cut(s) 408, 525, 1144
SduI GDGCHC 1 cut(s) 685
SfaNI GCATC 1 cut(s) 117
SfcI CTRYAG 3 cut(s) 18, 42, 1341
SfoI GGCGCC 1 cut(s) 1038
SinI GGWCC 1 cut(s) 743
Sse9I AATT 1 cut(s) 1104
SsiI CCGC 9 cut(s) 153, 205, 283, 369, 725, 775, 1115, 1230, 1356
SspDI GGCGCC 1 cut(s) 1036
SspMI CTAG 4 cut(s) 443, 602, 669, 1414
StyD4I CCNGG 3 cut(s) 406, 523, 1142
StyI CCWWGG 1 cut(s) 1005
TaaI ACNGT 5 cut(s) 217, 340, 699, 747, 1091
TaiI ACGT 2 cut(s) 803, 1330
TaqI TCGA 2 cut(s) 620, 1261
TasI AATT 1 cut(s) 1104
TatI WGTACW 1 cut(s) 538
TauI GCSGC 2 cut(s) 727, 777
TfiI GAWTC 8 cut(s) 656, 809, 1057, 1064, 1220, 1258, 1391, 1399
Tru1I TTAA 5 cut(s) 422, 495, 749, 1001, 1169
Tru9I TTAA 5 cut(s) 422, 495, 749, 1001, 1169
TscAI CASTG 5 cut(s) 220, 343, 487, 1094, 1350
TseFI GTSAC 1 cut(s) 1085
TseI GCWGC 1 cut(s) 1340
Tsp45I GTSAC 1 cut(s) 1085
TspDTI ATGAA 3 cut(s) 273, 606, 1292
TspRI CASTG 5 cut(s) 220, 343, 487, 1094, 1350
VpaK11BI GGWCC 1 cut(s) 743
XagI CCTNNNNNAGG 1 cut(s) 42
XcmI CCANNNNNNNNNTGG 1 cut(s) 1140
XspI CTAG 4 cut(s) 443, 602, 669, 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.