Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0003667

Physical Location & Seq

Genomic Coordinates Reverse (-)

6057284 .. 6068521

Gene Structure 11238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g05100.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3126 bp

ATGGGTTTAAGGTCCAGTGATTCATATAGCTGCTTCCTCCATTCGTGCACTCTCTCCAACCAAAACAAAACAGAGATGGGGAAGAAGAAAAGCAAAGATGGCGATGGCGGCCGACCGAGAACCGACAGCGAGCACTCCCCCTCCACCATCTTCGTCTCCAACCTCCCCTTTTCTTTCACCAAATCTCAGCTGGAGGAGACGTTCAGCGACATTGGACCGATTAGGAGGTGCTTTTTGGTTATGAAGAAGGGGTCAAGTGAGCACCGTGGTTTTGGTTTTGTTCAATTTGCTGTAACAGAAGATGCTAATCGTGCTGTTGAGCTGAAGAATGGTTTGTCCATTGGAGGTCGAAAAATAGCAGCTAAACATGCCATGCATCGTGCTCCGCTTGAACAACGAAGGCCAAAGACTAATCAAGGAACTGACGTGGATGAGACCGTGAAGACAGAAAATGACAAAGATGGTGACAATTCCCAAGGGGAAAAGGATGCTTCAAAATTGCAGGAAAGAGTTGTGACTTTGGAAAAAAATACAAAGAAACCTGTGAAGACTAGAAAAGCAGTAGCACTAAGTAATGATCAAGTGGCAAAAGTGGGTGGTTCAGAAAAGCAGAGGGTTGCTAGAACTGTCATATTCGGTGGTCTTCTTAATGCTGGTATGGCAGAAGATGTTCATCGCAAAGCTAGGGAGATTGGGGACGTATGTTCCATCACTTATCCTCTTCCCAAAGAAGAGCTTGAACAGCATGGTCTTGTGCAAGATGGATGCAAAATGGATGCTTCATCTGTACTTTATAACAGTGTCAGATCAGCTCATGCTTCTGTTTCTAGGTTACACCAAAAAGAAATAAAAGGCAGTATTGTTTGGGCACGTCAGCTGGGTGGGGAGGGTTCCAAGACTCAGAAGTGGAAGCTCATTGTTAGAAATCTTCCTTTCAAGGCCAAAGAGAATGAAATAAATAACATGTTTTCACCGGCAGGGTTTGTCTGGGATGTTTTTATTCCACATAATCCTGAGACAGGGTTATCTAAGGGTTTTGCATTTGTCAAATTCACACGCAAACAGGATGCGGAAAATGCAATAAAAAAGCTAAATGGACAAATGCTTCATAAAAGATCTATAGCTGTTGACTGGGCTGTTTCAAAGAAGATATATGGTGGCATTAATGCCCTTGCTTCAGAAGATGGACAAGAGGATGAAAGAGATGGGGAAAGTGATAGTAGCAGTGATGATTTTGAGGACGATGCTGGGGATGTCTGTATAAAGTCCCAGCACCATGATGGAACAGACAATGCTCTAGATGACTCTAACACCATAGAGAAAACAGACATCCCTACTGAAATTAATTTTGAAGAGGAAGCAGACATTGCAAGGAAAGTTCTAAAAAACTTCATCACACCCTCTGGTACAGCAACTCCTGATGATGGTTCCACGCTGCTGAAAAGGAACAAGGAGACATCTATTGATATGTCCATTGACGAGCCTAAGAAATTATCTTCTGAGACTACAAAGACATCAGAGGTTGATAAGCCTGGAAAGAAAAGCAAGACCATGGCATCAAATCTTATTGATGAATCTGTTGATGAGCCTAATTACTCATCTCTTGAGACTGCAAAAGCATCAGACGTTACTGAACCTGGAAAGTTAAGTAAAAGCGCGGCATCAAATCTTGAACAGGCAGACGAAGGAGAAGATTTGCATGGAACAATTTTCATAAGCAATCTTCCTTTTGAGATCGCTAATGAAGATGTCAAACAAAGGTTTTCCACCTTTGGGAAAGTTGACTCTTTTGTCCCAGTCCTTCATCCAGTCACCAAGCGACCCAAAGGATCTGGCTTTCTCAGGTTTACAACAAAAGATGGAGCTAGTTCTGCCGTTTCAGCTGCGAATGCAGAATCTGGTTCGGGAATTACTCTGAAAGGTAGACAATTAACAGTGTTGCAGGCTTTGGATAAAAAATCGGCTCATGATAAGGAATTAAATGTGGCCAAGAAAGAGGACCTAGACCACCGCAATCTCTATCTAGCAAAGGAAGGTCTTATTCTTGAGGGAACTCCAGCTGCAAAAGGGGTTTCAGCTAGTGATATGTTGAAACGCCAAATGGCAGAAAGAAGCAAGATGTCGAAACTTCAATCTCCAAATTTCCATGTTTCCAAGACGAGAATAGTTATAAAAAATTTGCCGAAGTCCATGAATGAAAAGGAACTAAAAAGACTTTGTATTGATGCAGTCACCTCACGAGCTACAAAACAAAAACCTTTTATTCGACAGATAAAGTTCTTGGAGGATGTGAAGAAGGGAAAGCTTAACACAAAGAATCACTCTCGTGGAGCTGCTTTCGTTGAGTTTACAGAGCATCAGCATGCACTTGTGGCCCTCAGAGTTCTTAACAACAATCCCGAAACTTTTGGTCCTGAGCATCGCCCAATTGTGGAGTTCGCACTGGATAATGTCCAGAAATTGAAACTACGAAATGCAAAGATTCAAGGGCAGCAGAATACAGCTCGTTGTAATCCAGGTGTACAGCAAAAGGATGGCTCAAATAGACCAGATGCCGATCCAAGCCAGAAGTACAACAAACGGAAACAAGGTGGTGACAAGCAAAATCTGGATGAATCAGTACCAAATAAAGAAGATGAAGCGAAAAACAGGGTTGGTGATGGAACTGCTACTGACCGAGAGAGAGCTTCTAAGAGGCAGAAGAAGGGTCCATTCGGAAAGGAAAAGAAGATCTCATCAACAAAAGTATCAGGAGGCTCAACAGAGAATGCGGAAAGCTCAAAACATGAACCAAACAATCATCAAGATGGCACGAAGCCTGGTCGTGGGAGATCATTCGAACGTGAATCCATGGCCATTGGTGCACAAACATCAAAATCTATGGGAAAGGCAAATGTACGACCTCAAAAGAGGAAGCTGCAAGCGCAGAAAGAGCTAGAGGGGGGAGAGATTGAAACGAGGAGAAAAAGGCCAAAGAAAAATAGAGACCCGTTAGGGCGGGACGTCGTGGATAAACTCGACATGCTGATCGAACAATATAGATCCAAGTACTCACAACGTAGCTCCGCCCAAACTGATGGCGAAAAGCAAGGTTCCAAGAAGCTTAGAAAATGGTTCCAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RRM_1

Protein Analysis

1042

Amino Acids

115.21

Weight (kDa)

9.37

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21440
fragaria_vesca	FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_7g06401 FvH4_7g06402 FvH4_7g06403 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280
malus_domestica	MD05G1059700.v1.1 MD10G1067900.v1.1
prunus_persica	Prupe.8G085300_v2.0.a1 Prupe.8G089600_v2.0.a1 Prupe.8G089700_v2.0.a1 Prupe.8G095100_v2.0.a1
pyrus_communis	pycom05g05100 pycom10g05370
rosa_chinensis	RchiOBHm_Chr6g0266121
rosa_laevigata	RLG00000014114
rosa_multiflora	Rmu_sc0004324.1_g000009 Rmu_sc0022087.1_g000001 Rmu_sc0040448.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435210 Rroxscaffold_7G00201960
rosa_rugosa	Rorug06G0024200
rosa_samantha	Rh6AG144800 Rh6BG145400 Rh6CG141900 Rh6DG129700
rosa_wichuraiana	Rw6G012500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	795, 2171
AasI	GACNNNNNNGTC	1 cut(s)	1790
AatII	GACGTC	1 cut(s)	3006
AccI	GTMKAC	1 cut(s)	1924
AccII	CGCG	1 cut(s)	1658
AciI	CCGC	8 cut(s)	108, 386, 1070, 1658, 2011, 2771, 2998, 3066
AclWI	GGATC	3 cut(s)	1837, 2552, 3036
AcoI	YGGCCR	3 cut(s)	109, 1986, 2853
AcsI	RAATTY	3 cut(s)	1049, 2140, 2176
AcuI	CTGAAG	2 cut(s)	344, 1161
AcyI	GRCGYC	1 cut(s)	3003
AfaI	GTAC	7 cut(s)	789, 1408, 2523, 2573, 2622, 2898, 3050
AfiI	CCNNNNNNNGG	5 cut(s)	1019, 1424, 1773, 2431, 2825
AflIII	ACRYGT	1 cut(s)	963
AjiI	CACGTC	2 cut(s)	427, 872
AjnI	CCWGG	4 cut(s)	1531, 1636, 2515, 2818
AleI	CACNNNNGTG	1 cut(s)	2325
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw21I	GWGCWC	5 cut(s)	50, 135, 264, 385, 2866
Alw26I	GTCTC	8 cut(s)	160, 191, 428, 1010, 1448, 1496, 1601, 2979
Alw44I	GTGCAC	2 cut(s)	46, 2862
AlwI	GGATC	3 cut(s)	1837, 2552, 3036
AlwNI	CAGNNNCTG	1 cut(s)	1898
AoxI	GGCC	7 cut(s)	109, 401, 939, 1986, 2373, 2853, 2969
ApaLI	GTGCAC	2 cut(s)	46, 2862
ApeKI	GCWGC	8 cut(s)	30, 359, 1435, 1883, 2060, 2333, 2491, 2917
ApoI	RAATTY	3 cut(s)	1049, 2140, 2176
AseI	ATTAAT	2 cut(s)	1164, 1344
Asp700I	GAANNNNTTC	1 cut(s)	669
AspLEI	GCGC	2 cut(s)	1658, 2926
AspS9I	GGNCC	6 cut(s)	12, 215, 1999, 2374, 2411, 2708
AsuHPI	GGTGA	7 cut(s)	169, 476, 963, 1804, 2224, 2606, 2669
AsuII	TTCGAA	1 cut(s)	2838
AvaII	GGWCC	5 cut(s)	12, 215, 1999, 2411, 2708
BaeGI	GKGCMC	3 cut(s)	50, 871, 2866
BaeI	ACNNNNGTAYC	2 cut(s)	2730, 2763
BalI	TGGCCA	2 cut(s)	1988, 2855
BauI	CACGAG	2 cut(s)	2238, 2325
BbsI	GAAGAC	3 cut(s)	449, 554, 635
Bbv12I	GWGCWC	5 cut(s)	50, 135, 264, 385, 2866
BbvI	GCAGC	8 cut(s)	17, 371, 1422, 1870, 2047, 2320, 2503, 2904
BceAI	ACGGC	1 cut(s)	1859
BciT130I	CCWGG	4 cut(s)	1533, 1638, 2517, 2820
BclI	TGATCA	1 cut(s)	577
BcoDI	GTCTC	8 cut(s)	160, 191, 428, 1010, 1448, 1496, 1601, 2979
BfmI	CTRYAG	1 cut(s)	1119
BglII	AGATCT	2 cut(s)	1115, 2730
BmcAI	AGTACT	1 cut(s)	3050
Bme1390I	CCNGG	4 cut(s)	1533, 1638, 2517, 2820
Bme18I	GGWCC	5 cut(s)	12, 215, 1999, 2411, 2708
BmgBI	CACGTC	2 cut(s)	427, 872
BmgT120I	GGNCC	6 cut(s)	12, 215, 1999, 2374, 2411, 2708
BmiI	GGNNCC	5 cut(s)	892, 1429, 2709, 3094, 3116
BmrFI	CCNGG	4 cut(s)	1533, 1638, 2517, 2820
BmrI	ACTGGG	2 cut(s)	1141, 1790
BmuI	ACTGGG	2 cut(s)	1141, 1790
BpiI	GAAGAC	3 cut(s)	449, 554, 635
BpmI	CTGGAG	2 cut(s)	212, 2040
Bpu10I	CCTNAGC	1 cut(s)	2415
Bpu14I	TTCGAA	1 cut(s)	2838
BpuEI	CTTGAG	2 cut(s)	1625, 2066
BsaBI	GATNNNNATC	3 cut(s)	306, 672, 2556
BsaHI	GRCGYC	1 cut(s)	3003
BsaI	GGTCTC	2 cut(s)	428, 2979
BsaJI	CCNNGG	4 cut(s)	265, 475, 1551, 2850
BsaXI	ACNNNNNCTCC	6 cut(s)	125, 155, 185, 215, 1399, 1429
Bsc4I	CCNNNNNNNGG	5 cut(s)	1019, 1424, 1773, 2431, 2825
Bse118I	RCCGGY	1 cut(s)	973
Bse1I	ACTGG	5 cut(s)	15, 1136, 1796, 1808, 2448
Bse3DI	GCAATG	1 cut(s)	1365
Bse8I	GATNNNNATC	3 cut(s)	306, 672, 2556
BseBI	CCWGG	4 cut(s)	1533, 1638, 2517, 2820
BseDI	CCNNGG	4 cut(s)	265, 475, 1551, 2850
BseJI	GATNNNNATC	3 cut(s)	306, 672, 2556
BseLI	CCNNNNNNNGG	5 cut(s)	1019, 1424, 1773, 2431, 2825
BseMI	GCAATG	1 cut(s)	1365
BseMII	CTCAG	7 cut(s)	200, 914, 1005, 1491, 1855, 2392, 2406
BseNI	ACTGG	5 cut(s)	15, 1136, 1796, 1808, 2448
BseRI	GAGGAG	2 cut(s)	209, 2974
BseSI	GKGCMC	3 cut(s)	50, 871, 2866
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	8 cut(s)	17, 371, 1422, 1870, 2047, 2320, 2503, 2904
BseYI	CCCAGC	3 cut(s)	877, 1247, 1269
Bsh1236I	CGCG	1 cut(s)	1658
Bsh1285I	CGRYCG	2 cut(s)	112, 116
BshFI	GGCC	7 cut(s)	111, 403, 941, 1988, 2375, 2855, 2971
BsiEI	CGRYCG	2 cut(s)	112, 116
BsiHKAI	GWGCWC	5 cut(s)	50, 135, 264, 385, 2866
BsiSI	CCGG	1 cut(s)	974
BslFI	GGGAC	4 cut(s)	710, 1252, 1778, 3014
BslI	CCNNNNNNNGG	5 cut(s)	1019, 1424, 1773, 2431, 2825
BsmAI	GTCTC	8 cut(s)	160, 191, 428, 1010, 1448, 1496, 1601, 2979
BsmBI	CGTCTC	2 cut(s)	160, 191
BsmFI	GGGAC	4 cut(s)	710, 1252, 1778, 3014
BsmI	GAATGC	2 cut(s)	1894, 2773
BsnI	GGCC	7 cut(s)	111, 403, 941, 1988, 2375, 2855, 2971
Bso31I	GGTCTC	2 cut(s)	428, 2979
Bsp119I	TTCGAA	1 cut(s)	2838
Bsp1286I	GDGCHC	6 cut(s)	50, 135, 264, 385, 871, 2866
Bsp1407I	TGTACA	1 cut(s)	2521
Bsp19I	CCATGG	2 cut(s)	1551, 2850
BspACI	CCGC	8 cut(s)	108, 386, 1070, 1658, 2011, 2771, 2998, 3066
BspANI	GGCC	7 cut(s)	111, 403, 941, 1988, 2375, 2855, 2971
BspCNI	CTCAG	7 cut(s)	199, 913, 1006, 1492, 1854, 2391, 2407
BspFNI	CGCG	1 cut(s)	1658
BspHI	TCATGA	1 cut(s)	1966
BspLI	GGNNCC	5 cut(s)	892, 1429, 2709, 3094, 3116
BspPI	GGATC	3 cut(s)	1837, 2552, 3036
BspQI	GCTCTTC	1 cut(s)	726
BspT104I	TTCGAA	1 cut(s)	2838
BspTNI	GGTCTC	2 cut(s)	428, 2979
BsrDI	GCAATG	1 cut(s)	1365
BsrFI	RCCGGY	1 cut(s)	973
BsrGI	TGTACA	1 cut(s)	2521
BsrI	ACTGG	5 cut(s)	15, 1136, 1796, 1808, 2448
BssAI	RCCGGY	1 cut(s)	973
BssECI	CCNNGG	4 cut(s)	265, 475, 1551, 2850
BssNI	GRCGYC	1 cut(s)	3003
BssSI	CACGAG	2 cut(s)	2238, 2325
BssT1I	CCWWGG	3 cut(s)	475, 1551, 2850
Bst2BI	CACGAG	2 cut(s)	2238, 2325
Bst2UI	CCWGG	4 cut(s)	1533, 1638, 2517, 2820
Bst4CI	ACNGT	5 cut(s)	266, 439, 628, 800, 1936
Bst6I	CTCTTC	3 cut(s)	726, 726, 1347
BstACI	GRCGYC	1 cut(s)	3003
BstAPI	GCANNNNNTGC	1 cut(s)	1367
BstAUI	TGTACA	1 cut(s)	2521
BstBI	TTCGAA	1 cut(s)	2838
BstC8I	GCNNGC	4 cut(s)	131, 1944, 2364, 2922
BstDSI	CCRYGG	3 cut(s)	265, 1551, 2850
BstENI	CCTNNNNNAGG	1 cut(s)	1017
BstFNI	CGCG	1 cut(s)	1658
BstHHI	GCGC	2 cut(s)	1658, 2926
BstMAI	GTCTC	8 cut(s)	160, 191, 428, 1010, 1448, 1496, 1601, 2979
BstMCI	CGRYCG	2 cut(s)	112, 116
BstNI	CCWGG	4 cut(s)	1533, 1638, 2517, 2820
BstNSI	RCATGY	4 cut(s)	371, 967, 2366, 3025
BstSCI	CCNGG	4 cut(s)	1531, 1636, 2515, 2818
BstSFI	CTRYAG	1 cut(s)	1119
BstSLI	GKGCMC	3 cut(s)	50, 871, 2866
BstUI	CGCG	1 cut(s)	1658
BstV1I	GCAGC	8 cut(s)	17, 371, 1422, 1870, 2047, 2320, 2503, 2904
BstV2I	GAAGAC	3 cut(s)	449, 554, 635
BstX2I	RGATCY	4 cut(s)	1115, 1829, 2730, 3041
BstXI	CCANNNNNNTGG	1 cut(s)	3077
BstYI	RGATCY	4 cut(s)	1115, 1829, 2730, 3041
BstZI	CGGCCG	1 cut(s)	109
BsuRI	GGCC	7 cut(s)	111, 403, 941, 1988, 2375, 2855, 2971
BtgI	CCRYGG	3 cut(s)	265, 1551, 2850
BtgZI	GCGATG	3 cut(s)	117, 659, 2405
BtrI	CACGTC	2 cut(s)	427, 872
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	5 cut(s)	22, 805, 1231, 1941, 2441
Cac8I	GCNNGC	4 cut(s)	131, 1944, 2364, 2922
CaiI	CAGNNNCTG	1 cut(s)	1898
CciI	TCATGA	1 cut(s)	1966
CfoI	GCGC	2 cut(s)	1658, 2926
Cfr10I	RCCGGY	1 cut(s)	973
Cfr13I	GGNCC	6 cut(s)	12, 215, 1999, 2374, 2411, 2708
Csp6I	GTAC	7 cut(s)	788, 1407, 2522, 2572, 2621, 2897, 3049
CviQI	GTAC	7 cut(s)	788, 1407, 2522, 2572, 2621, 2897, 3049
DrdI	GACNNNNNNGTC	1 cut(s)	1790
DseDI	GACNNNNNNGTC	1 cut(s)	1790
EaeI	YGGCCR	3 cut(s)	109, 1986, 2853
EagI	CGGCCG	1 cut(s)	109
Eam1104I	CTCTTC	3 cut(s)	726, 726, 1347
EarI	CTCTTC	3 cut(s)	726, 726, 1347
EciI	GGCGGA	1 cut(s)	3055
EclXI	CGGCCG	1 cut(s)	109
Eco130I	CCWWGG	3 cut(s)	475, 1551, 2850
Eco31I	GGTCTC	2 cut(s)	428, 2979
Eco47I	GGWCC	5 cut(s)	12, 215, 1999, 2411, 2708
Eco52I	CGGCCG	1 cut(s)	109
Eco57I	CTGAAG	2 cut(s)	344, 1161
EcoNI	CCTNNNNNAGG	1 cut(s)	1017
EcoO109I	RGGNCCY	1 cut(s)	1999
EcoRII	CCWGG	4 cut(s)	1531, 1636, 2515, 2818
EcoT14I	CCWWGG	3 cut(s)	475, 1551, 2850
EcoT22I	ATGCAT	1 cut(s)	378
ErhI	CCWWGG	3 cut(s)	475, 1551, 2850
Esp3I	CGTCTC	2 cut(s)	160, 191
FalI	AAGNNNNNCTT	2 cut(s)	720, 752
FaqI	GGGAC	4 cut(s)	710, 1252, 1778, 3014
FauI	CCCGC	1 cut(s)	2991
FbaI	TGATCA	1 cut(s)	577
FblI	GTMKAC	1 cut(s)	1924
GlaI	GCGC	2 cut(s)	1657, 2925
GsaI	CCCAGC	3 cut(s)	881, 1251, 1273
GsuI	CTGGAG	2 cut(s)	212, 2040
HaeIII	GGCC	7 cut(s)	111, 403, 941, 1988, 2375, 2855, 2971
HapII	CCGG	1 cut(s)	974
HhaI	GCGC	2 cut(s)	1658, 2926
Hin1I	GRCGYC	1 cut(s)	3003
Hin6I	GCGC	2 cut(s)	1656, 2924
HinP1I	GCGC	2 cut(s)	1656, 2924
HincII	GTYRAC	2 cut(s)	1129, 1783
HindII	GTYRAC	2 cut(s)	1129, 1783
HindIII	AAGCTT	2 cut(s)	2303, 3101
HpaII	CCGG	1 cut(s)	974
HphI	GGTGA	7 cut(s)	169, 476, 963, 1804, 2224, 2606, 2669
Hpy166II	GTNNAC	8 cut(s)	48, 1129, 1783, 1848, 1925, 2349, 2522, 2864
Hpy8I	GTNNAC	8 cut(s)	48, 1129, 1783, 1848, 1925, 2349, 2522, 2864
Hpy99I	CGWCG	1 cut(s)	3008
HpyAV	CCTTC	7 cut(s)	241, 393, 1679, 1811, 2027, 2290, 2698
HpyCH4III	ACNGT	5 cut(s)	266, 439, 628, 800, 1936
HpyCH4IV	ACGT	8 cut(s)	200, 426, 699, 871, 1626, 2842, 3003, 3058
HpySE526I	ACGT	8 cut(s)	200, 426, 699, 871, 1626, 2842, 3003, 3058
Hsp92I	GRCGYC	1 cut(s)	3003
HspAI	GCGC	2 cut(s)	1656, 2924
Ksp22I	TGATCA	1 cut(s)	577
LguI	GCTCTTC	1 cut(s)	726
LmnI	GCTCC	4 cut(s)	388, 1862, 2330, 3068
Lsp1109I	GCAGC	8 cut(s)	17, 371, 1422, 1870, 2047, 2320, 2503, 2904
MaeII	ACGT	8 cut(s)	200, 426, 699, 871, 1626, 2842, 3003, 3058
MaeIII	GTNAC	8 cut(s)	292, 464, 514, 831, 1627, 1810, 2230, 2594
MfeI	CAATTG	1 cut(s)	2427
MflI	RGATCY	4 cut(s)	1115, 1829, 2730, 3041
MhlI	GDGCHC	6 cut(s)	50, 135, 264, 385, 871, 2866
MlsI	TGGCCA	2 cut(s)	1988, 2855
MluNI	TGGCCA	2 cut(s)	1988, 2855
MlyI	GAGTC	3 cut(s)	892, 1298, 1778
MmeI	TCCRAC	2 cut(s)	81, 183
Mox20I	TGGCCA	2 cut(s)	1988, 2855
Mph1103I	ATGCAT	1 cut(s)	378
MroXI	GAANNNNTTC	1 cut(s)	669
MscI	TGGCCA	2 cut(s)	1988, 2855
MseI	TTAA	9 cut(s)	8, 648, 1164, 1344, 1646, 1931, 1979, 2307, 2388
MslI	CAYNNNNRTG	4 cut(s)	1278, 2325, 2361, 2805
Msp20I	TGGCCA	2 cut(s)	1988, 2855
MspA1I	CMGCKG	4 cut(s)	190, 877, 1883, 2060
MspI	CCGG	1 cut(s)	974
MspR9I	CCNGG	4 cut(s)	1533, 1638, 2517, 2820
MunI	CAATTG	1 cut(s)	2427
Mva1269I	GAATGC	2 cut(s)	1894, 2773
MvaI	CCWGG	4 cut(s)	1533, 1638, 2517, 2820
MvnI	CGCG	1 cut(s)	1658
NcoI	CCATGG	2 cut(s)	1551, 2850
NlaIV	GGNNCC	5 cut(s)	892, 1429, 2709, 3094, 3116
NmuCI	GTSAC	5 cut(s)	464, 514, 1810, 2230, 2594
NsiI	ATGCAT	1 cut(s)	378
NspI	RCATGY	4 cut(s)	371, 967, 2366, 3025
NspV	TTCGAA	1 cut(s)	2838
OliI	CACNNNNGTG	1 cut(s)	2325
PaeI	GCATGC	1 cut(s)	2366
PagI	TCATGA	1 cut(s)	1966
PciI	ACATGT	1 cut(s)	963
PciSI	GCTCTTC	1 cut(s)	726
PctI	GAATGC	2 cut(s)	1894, 2773
PdmI	GAANNNNTTC	1 cut(s)	669
PfeI	GAWTC	7 cut(s)	20, 1574, 1895, 2317, 2482, 2615, 2846
PleI	GAGTC	3 cut(s)	892, 1298, 1778
PpsI	GAGTC	3 cut(s)	892, 1298, 1778
PpuMI	RGGWCCY	1 cut(s)	1999
PscI	ACATGT	1 cut(s)	963
PshBI	ATTAAT	2 cut(s)	1164, 1344
PsiI	TTATAA	2 cut(s)	795, 2171
Psp5II	RGGWCCY	1 cut(s)	1999
Psp6I	CCWGG	4 cut(s)	1531, 1636, 2515, 2818
PspFI	CCCAGC	3 cut(s)	877, 1247, 1269
PspGI	CCWGG	4 cut(s)	1531, 1636, 2515, 2818
PspN4I	GGNNCC	5 cut(s)	892, 1429, 2709, 3094, 3116
PspPI	GGNCC	6 cut(s)	12, 215, 1999, 2374, 2411, 2708
PspPPI	RGGWCCY	1 cut(s)	1999
PstNI	CAGNNNCTG	1 cut(s)	1898
PsuI	RGATCY	4 cut(s)	1115, 1829, 2730, 3041
PvuII	CAGCTG	4 cut(s)	190, 877, 1883, 2060
RsaI	GTAC	7 cut(s)	789, 1408, 2523, 2573, 2622, 2898, 3050
RsaNI	GTAC	7 cut(s)	788, 1407, 2522, 2572, 2621, 2897, 3049
RseI	CAYNNNNRTG	4 cut(s)	1278, 2325, 2361, 2805
SapI	GCTCTTC	1 cut(s)	726
SaqAI	TTAA	9 cut(s)	8, 648, 1164, 1344, 1646, 1931, 1979, 2307, 2388
Sau96I	GGNCC	6 cut(s)	12, 215, 1999, 2374, 2411, 2708
ScaI	AGTACT	1 cut(s)	3050
SchI	GAGTC	3 cut(s)	892, 1298, 1778
ScrFI	CCNGG	4 cut(s)	1533, 1638, 2517, 2820
SduI	GDGCHC	6 cut(s)	50, 135, 264, 385, 871, 2866
SfcI	CTRYAG	1 cut(s)	1119
SfuI	TTCGAA	1 cut(s)	2838
SinI	GGWCC	5 cut(s)	12, 215, 1999, 2411, 2708
SmiMI	CAYNNNNRTG	4 cut(s)	1278, 2325, 2361, 2805
SmlI	CTYRAG	2 cut(s)	1604, 2045
SmoI	CTYRAG	2 cut(s)	1604, 2045
SphI	GCATGC	1 cut(s)	2366
SsiI	CCGC	8 cut(s)	108, 386, 1070, 1658, 2011, 2771, 2998, 3066
StyD4I	CCNGG	4 cut(s)	1531, 1636, 2515, 2818
StyI	CCWWGG	3 cut(s)	475, 1551, 2850
TaaI	ACNGT	5 cut(s)	266, 439, 628, 800, 1936
TaiI	ACGT	8 cut(s)	203, 429, 702, 874, 1629, 2845, 3006, 3061
TaqI	TCGA	6 cut(s)	349, 2123, 2266, 2838, 3018, 3030
TaqII	GACCGA	3 cut(s)	130, 232, 2691
TatI	WGTACW	4 cut(s)	787, 2521, 2571, 3048
TauI	GCSGC	2 cut(s)	111, 1661
TfiI	GAWTC	7 cut(s)	20, 1574, 1895, 2317, 2482, 2615, 2846
Tru1I	TTAA	9 cut(s)	8, 648, 1164, 1344, 1646, 1931, 1979, 2307, 2388
Tru9I	TTAA	9 cut(s)	8, 648, 1164, 1344, 1646, 1931, 1979, 2307, 2388
TscAI	CASTG	5 cut(s)	22, 805, 1231, 1941, 2448
TseFI	GTSAC	5 cut(s)	464, 514, 1810, 2230, 2594
TseI	GCWGC	8 cut(s)	30, 359, 1435, 1883, 2060, 2333, 2491, 2917
Tsp45I	GTSAC	5 cut(s)	464, 514, 1810, 2230, 2594
TspGWI	ACGGA	1 cut(s)	2596
TspRI	CASTG	5 cut(s)	22, 805, 1231, 1941, 2448
VneI	GTGCAC	2 cut(s)	46, 2862
VpaK11BI	GGWCC	5 cut(s)	12, 215, 1999, 2411, 2708
VspI	ATTAAT	2 cut(s)	1164, 1344
XagI	CCTNNNNNAGG	1 cut(s)	1017
XapI	RAATTY	3 cut(s)	1049, 2140, 2176
XbaI	TCTAGA	1 cut(s)	1297
XceI	RCATGY	4 cut(s)	371, 967, 2366, 3025
XcmI	CCANNNNNNNNNTGG	2 cut(s)	187, 1277
XmiI	GTMKAC	1 cut(s)	1924
XmnI	GAANNNNTTC	1 cut(s)	669
ZraI	GACGTC	1 cut(s)	3004
ZrmI	AGTACT	1 cut(s)	3050
Zsp2I	ATGCAT	1 cut(s)	378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.