Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003667

Physical Location & Seq

Genomic Coordinates Forward (+)

22538816 .. 22548078

Gene Structure 9263 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG144800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGAGAGGTGCGATCAAAGTAGATTCTCCAAGCCGTACCAAAACTGCCCTCCACATGATGGATCCAAGTCCTAAAAGGACTTTCGGGTCATCAAAACCCGAAGCCCAGTTAGTAGGCCCAAATGAGAACCCGAAGGGTTGTAAACCCACCCTGAGAGGTTTTAGGTCCATTCCATTCGCCCGCCGAGCAGGAGCAGGAGCAGAAGCAGAGATGGGGAAGAAGAAAAGCAGAGATGGGAGCCATCCCAGAACCGAAACCGAGCACTGTACCTCCACCGTCTTCGTCTCCAATTTGCCCTACTCTTTCACCAATTCCCAGCTGGAGGAGACGTTCAGTGAAGTCGGACCGATCAGGCGGTGCTTTATGGTCACAAAAAAGGGGTCGGCGGAGCACCGTGGTTTTGGCTTTGTTCAATTTGCTGTCACAACCGATGCTGATCGCTCTGTCGAGCTGAAGAATGGTGTGTCTGTTGGAGGTCGAAAGATTGCTGTTAAGCATGCCATGCACCGTGCACCTTTTGAACAACGAAGATCAAAGAAAGATCAAGGTTCTGAATTGGATGAAACTATGAATTCAAAAAATGGCAAGGATGGAGACAATCCTAAAGAGGAAAAGGGTGCTTCAAACTTGGATACAAGAGAGATTAAATTGGATAAGACCATGAAGTCAAAGAATGATAAGGATGCTGGCAATTTGAAAAAGGAAAAGGATGCTTCAAAGTTGGAGGAAAAAGAAAAAACTGTGAAACCCAGAAAACCAGTAGCACCATGTAAAGATGTTGTGGCAAAAGTGGGAGGTTCTGAAAAGCAGAGGGTTGCTAGGACTGTTATATTTGGTTGCCTTCTCAATGCTGGCATGGCGGAAGATGTTCATCGCCAAGCTAGGGAGGTTGGCGATGTGTGTTCTATAACTTATCCTTTTCCCAAAGAAGAGCTTCAACAACATGGTCTTGTACAAGATGGATGCAAAATGGATGCCTCAGCTGTACTTTACAACAGTGTTAAATCAGCTCATGCTTCTGTTGCAATGTTACACCAAAAGGAGATAAAAGGAGGAATTGTTTGGGCCCGTCAGCTGGGTGGGGAGGGTTCCAAGACTCGGAAGTGGAAGCTCATTGTCAGAAATCTTCCTTTCAAGGCCAAAGTCAGTGATATCAAAGATATGTTTTCATCTGCGGGATTTGTCTGGGAGGTTTATATACCACAGAATTCTGATACAGGGTTGTCTAAAGGATTTGCATTCGTCAAATTCACACGCAGACAAGATGCGGAAAATGCAATAAAAAAGTTCAATGGACAAAAACTTCTTAAAAGACCAATTGCTGTGGACTGGGCTGTTCCTAAGCAGATATATGGTAGTGGCAATGACACCCTTGCTTCAGAAGATGGAGAAAAGGGCGGAAGAGATGGGGGAAATGATAGTAGCAGTGATGATTTTGAGGGTGATGCTGGAGATGCATGTAAAAAGTCCCAGCACCTTGATGGGATTGACAGTGCTTCAGATGACTCCAATACCACAGAGCTGAAAGACATCCCGACTGAAATTGATTTTGACGAGGAAGCAGACATAGCAAGAAAAGTTCTAAAAAACTTGACCACGCCCTCTGGTACAGTAACTGCTGTTGATAATTCTGCATTGCCCAAAGGTAACAAGGAGCCAACTATTGATTTTGAGGAGGAAGCAGACATTGCAAGAAAAGTTCTAAAAAAGTTTACCACACCCTCTGGTACAGTAACTACTGTTGATGATTCTGCACTGCCCGTAAACAACAAGGAGCCAACTATTGAAGAATCTGCTAATGAGACTAGTAAGTTATCTTCCGAGACTGCGCCTAATAAATTATCTTCTGAAAGTGCCAGTGCATCAGATGTTGCTAAACCACAAACGGAAGAAGTAGATGATTTGCATAGAACAATTTTCATCAGCAACCTTCCTTTTGAGATCACTAATGAAGAAGTCAAACAAAGGTTTTCTGCTTTCGGGCAAGTGCAATCTTTTGTCCCAGTTCTTCATCCACTTACCAAGCGACCAAAAGGAACTGGCTTTCTCAAGTTTAAGACAATAGATGCAGTGAATTCTGCTGTTTCAGCTGGGAGTGCCGCATCTGGCTTGGGGATTTTTCTCAAGGGTAGACAACTGACAGTCTTCCAGGCTTTGGATAGAAAATCAGCTCACGAGAAGGAAGAAAATATGGCCAAAAAAGAGGACATAGACCACCGCAATCTCTATTTGGCAAAGGAAGGTCTTATTCTTGCGGGAACTCCCGCTGCAGAAGGGGTTTCAGCTAATGATATGTCAAAACGCCAAATGTTGGAGAGGAGCAAGGCGATGAAGCTTAAATCTCCAAATTTTCATGTTTCAAAGACAAGATTAGTTATGTACAATTTGCCAAAGTCCATGACTGAAAAACAGCTTAAGAAACTTTGTATGGATGCTGTTACCTCACGAGCGAAGCTTCAAAAACCTGTGATTCGACAGGTTAGATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RRM_1

Protein Analysis

829

Amino Acids

90.88

Weight (kDa)

9.23

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	93 - 162	1.9e-16	RNA recognition motif
RRM_1	PF00076	371 - 440	5.1e-16	RNA recognition motif
RRM_1	PF00076	639 - 696	8.9e-13	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21440
fragaria_vesca	FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_7g06401 FvH4_7g06402 FvH4_7g06403 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280
malus_domestica	MD05G1059700.v1.1 MD10G1067900.v1.1
prunus_persica	Prupe.8G085300_v2.0.a1 Prupe.8G089600_v2.0.a1 Prupe.8G089700_v2.0.a1 Prupe.8G095100_v2.0.a1
pyrus_communis	pycom05g05100 pycom10g05370
rosa_chinensis	RchiOBHm_Chr6g0266121
rosa_laevigata	RLG00000014114
rosa_multiflora	Rmu_sc0004324.1_g000009 Rmu_sc0022087.1_g000001 Rmu_sc0040448.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435210 Rroxscaffold_7G00201960
rosa_rugosa	Rorug06G0024200
rosa_samantha	Rh6AG144800 Rh6BG145400 Rh6CG141900 Rh6DG129700
rosa_wichuraiana	Rw6G012500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	85, 664
AccB7I	CCANNNNNTGG	3 cut(s)	58, 2155, 2311
AccI	GTMKAC	1 cut(s)	2131
AclWI	GGATC	2 cut(s)	56, 69
AcoI	YGGCCR	1 cut(s)	2193
AcsI	RAATTY	5 cut(s)	571, 1207, 1247, 2074, 2347
AcuI	CTGAAG	3 cut(s)	473, 1362, 1482
AfaI	GTAC	7 cut(s)	37, 268, 954, 987, 1609, 1729, 2381
AfiI	CCNNNNNNNGG	7 cut(s)	58, 322, 883, 1075, 1098, 2155, 2311
AflII	CTTAAG	1 cut(s)	2414
AhlI	ACTAGT	1 cut(s)	1805
AjnI	CCWGG	1 cut(s)	2148
AloI	GAACNNNNNNTCC	2 cut(s)	314, 346
Alw21I	GWGCWC	3 cut(s)	264, 393, 514
Alw26I	GTCTC	5 cut(s)	289, 320, 588, 1796, 1817
Alw44I	GTGCAC	1 cut(s)	510
AlwI	GGATC	2 cut(s)	56, 69
AlwNI	CAGNNNCTG	1 cut(s)	1616
AoxI	GGCC	4 cut(s)	115, 1065, 1137, 2193
ApaI	GGGCCC	1 cut(s)	1069
ApaLI	GTGCAC	1 cut(s)	510
ApeKI	GCWGC	1 cut(s)	2267
ApoI	RAATTY	5 cut(s)	571, 1207, 1247, 2074, 2347
ArsI	GACNNNNNNTTYG	2 cut(s)	365, 397
Asp700I	GAANNNNTTC	2 cut(s)	867, 933
AspLEI	GCGC	1 cut(s)	1831
AspS9I	GGNCC	5 cut(s)	116, 165, 344, 1065, 1066
AsuHPI	GGTGA	2 cut(s)	298, 1454
AvaII	GGWCC	2 cut(s)	165, 344
BaeGI	GKGCMC	2 cut(s)	514, 1069
BalI	TGGCCA	1 cut(s)	2195
BamHI	GGATCC	1 cut(s)	61
BanII	GRGCYC	1 cut(s)	1069
BarI	GAAGNNNNNNTAC	2 cut(s)	1801, 1833
BauI	CACGAG	2 cut(s)	2174, 2445
BbsI	GAAGAC	2 cut(s)	271, 2137
Bbv12I	GWGCWC	3 cut(s)	264, 393, 514
BbvCI	CCTCAGC	1 cut(s)	979
BbvI	GCAGC	1 cut(s)	2254
BccI	CCATC	9 cut(s)	52, 205, 227, 249, 584, 953, 1379, 1400, 1475
BceAI	ACGGC	1 cut(s)	18
BciT130I	CCWGG	1 cut(s)	2150
BciVI	GTATCC	1 cut(s)	625
BcoDI	GTCTC	5 cut(s)	289, 320, 588, 1796, 1817
BcuI	ACTAGT	1 cut(s)	1805
BfaI	CTAG	3 cut(s)	819, 882, 1806
BfmI	CTRYAG	1 cut(s)	2268
BfrI	CTTAAG	1 cut(s)	2414
BfuI	GTATCC	1 cut(s)	625
BisI	GCNGC	2 cut(s)	2100, 2268
BlsI	GCNGC	2 cut(s)	2101, 2269
Bme1390I	CCNGG	1 cut(s)	2150
Bme18I	GGWCC	2 cut(s)	165, 344
BmgT120I	GGNCC	5 cut(s)	116, 165, 344, 1065, 1066
BmiI	GGNNCC	6 cut(s)	63, 239, 1067, 1090, 1656, 1776
BmrFI	CCNGG	1 cut(s)	2150
BmrI	ACTGGG	3 cut(s)	100, 1339, 1997
BmuI	ACTGGG	3 cut(s)	100, 1339, 1997
BpiI	GAAGAC	2 cut(s)	271, 2137
BpmI	CTGGAG	2 cut(s)	341, 1470
Bpu10I	CCTNAGC	2 cut(s)	979, 1341
BpuEI	CTTGAG	2 cut(s)	2033, 2108
BsaBI	GATNNNNATC	2 cut(s)	435, 870
BsaJI	CCNNGG	1 cut(s)	394
BsaXI	ACNNNNNCTCC	6 cut(s)	254, 284, 314, 344, 1044, 1074
Bsc4I	CCNNNNNNNGG	7 cut(s)	58, 322, 883, 1075, 1098, 2155, 2311
Bse1I	ACTGG	6 cut(s)	106, 758, 1334, 1857, 2003, 2044
Bse3DI	GCAATG	4 cut(s)	1032, 1369, 1634, 1686
Bse8I	GATNNNNATC	2 cut(s)	435, 870
BseBI	CCWGG	1 cut(s)	2150
BseDI	CCNNGG	1 cut(s)	394
BseJI	GATNNNNATC	2 cut(s)	435, 870
BseLI	CCNNNNNNNGG	7 cut(s)	58, 322, 883, 1075, 1098, 2155, 2311
BseMI	GCAATG	4 cut(s)	1032, 1369, 1634, 1686
BseMII	CTCAG	2 cut(s)	143, 993
BseNI	ACTGG	6 cut(s)	106, 758, 1334, 1857, 2003, 2044
BseRI	GAGGAG	3 cut(s)	338, 1688, 2332
BseSI	GKGCMC	2 cut(s)	514, 1069
BseXI	GCAGC	1 cut(s)	2254
BseYI	CCCAGC	4 cut(s)	315, 1075, 1470, 2090
BsgI	GTGCAG	1 cut(s)	1737
BshFI	GGCC	4 cut(s)	117, 1067, 1139, 2195
BsiHKAI	GWGCWC	3 cut(s)	264, 393, 514
BslFI	GGGAC	2 cut(s)	1453, 1985
BslI	CCNNNNNNNGG	7 cut(s)	58, 322, 883, 1075, 1098, 2155, 2311
BsmAI	GTCTC	5 cut(s)	289, 320, 588, 1796, 1817
BsmBI	CGTCTC	2 cut(s)	289, 320
BsmFI	GGGAC	2 cut(s)	1453, 1985
BsmI	GAATGC	1 cut(s)	1238
BsnI	GGCC	4 cut(s)	117, 1067, 1139, 2195
Bsp120I	GGGCCC	1 cut(s)	1065
Bsp1286I	GDGCHC	4 cut(s)	264, 393, 514, 1069
Bsp1407I	TGTACA	2 cut(s)	952, 2379
Bsp143I	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
BspANI	GGCC	4 cut(s)	117, 1067, 1139, 2195
BspCNI	CTCAG	2 cut(s)	144, 992
BspLI	GGNNCC	6 cut(s)	63, 239, 1067, 1090, 1656, 1776
BspMAI	CTGCAG	1 cut(s)	2272
BspPI	GGATC	2 cut(s)	56, 69
BspQI	GCTCTTC	1 cut(s)	924
BspTI	CTTAAG	1 cut(s)	2414
BsrDI	GCAATG	4 cut(s)	1032, 1369, 1634, 1686
BsrGI	TGTACA	2 cut(s)	952, 2379
BsrI	ACTGG	6 cut(s)	106, 758, 1334, 1857, 2003, 2044
BssECI	CCNNGG	1 cut(s)	394
BssMI	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
BssSI	CACGAG	2 cut(s)	2174, 2445
Bst2BI	CACGAG	2 cut(s)	2174, 2445
Bst2UI	CCWGG	1 cut(s)	2150
Bst6I	CTCTTC	2 cut(s)	924, 1396
BstAFI	CTTAAG	1 cut(s)	2414
BstAPI	GCANNNNNTGC	2 cut(s)	502, 1688
BstAUI	TGTACA	2 cut(s)	952, 2379
BstC8I	GCNNGC	4 cut(s)	181, 498, 688, 853
BstDEI	CTNAG	3 cut(s)	152, 979, 1341
BstDSI	CCRYGG	1 cut(s)	394
BstHHI	GCGC	1 cut(s)	1831
BstKTI	GATC	7 cut(s)	15, 64, 351, 439, 533, 544, 1944
BstMAI	GTCTC	5 cut(s)	289, 320, 588, 1796, 1817
BstMBI	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
BstNI	CCWGG	1 cut(s)	2150
BstNSI	RCATGY	2 cut(s)	500, 1461
BstSCI	CCNGG	1 cut(s)	2148
BstSFI	CTRYAG	1 cut(s)	2268
BstSLI	GKGCMC	2 cut(s)	514, 1069
BstV1I	GCAGC	1 cut(s)	2254
BstV2I	GAAGAC	2 cut(s)	271, 2137
BstX2I	RGATCY	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	61
BsuI	GTATCC	1 cut(s)	625
BsuRI	GGCC	4 cut(s)	117, 1067, 1139, 2195
BtgI	CCRYGG	1 cut(s)	394
BtgZI	GCGATG	3 cut(s)	857, 909, 2342
BtsI	GCAGTG	3 cut(s)	1432, 1754, 2076
BtsIMutI	CAGTG	9 cut(s)	262, 340, 1003, 1153, 1432, 1498, 1754, 1864, 2076
Cac8I	GCNNGC	4 cut(s)	181, 498, 688, 853
CaiI	CAGNNNCTG	1 cut(s)	1616
CfoI	GCGC	1 cut(s)	1831
Cfr13I	GGNCC	5 cut(s)	116, 165, 344, 1065, 1066
CpoI	CGGWCCG	1 cut(s)	344
Csp6I	GTAC	7 cut(s)	36, 267, 953, 986, 1608, 1728, 2380
CspCI	CAANNNNNGTGG	2 cut(s)	1305, 1340
CspI	CGGWCCG	1 cut(s)	344
CviQI	GTAC	7 cut(s)	36, 267, 953, 986, 1608, 1728, 2380
DdeI	CTNAG	3 cut(s)	152, 979, 1341
DpnI	GATC	7 cut(s)	14, 63, 350, 438, 532, 543, 1943
DpnII	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
DrdI	GACNNNNNNGTC	2 cut(s)	85, 664
DseDI	GACNNNNNNGTC	2 cut(s)	85, 664
EaeI	YGGCCR	1 cut(s)	2193
Eam1104I	CTCTTC	2 cut(s)	924, 1396
EarI	CTCTTC	2 cut(s)	924, 1396
EciI	GGCGGA	3 cut(s)	401, 875, 1413
Eco24I	GRGCYC	1 cut(s)	1069
Eco32I	GATATC	1 cut(s)	1153
Eco47I	GGWCC	2 cut(s)	165, 344
Eco57I	CTGAAG	3 cut(s)	473, 1362, 1482
EcoRI	GAATTC	3 cut(s)	571, 1207, 2074
EcoRII	CCWGG	1 cut(s)	2148
EcoRV	GATATC	1 cut(s)	1153
EcoT22I	ATGCAT	1 cut(s)	1459
EcoT38I	GRGCYC	1 cut(s)	1069
Esp3I	CGTCTC	2 cut(s)	289, 320
FalI	AAGNNNNNCTT	2 cut(s)	918, 950
FaqI	GGGAC	2 cut(s)	1453, 1985
FauI	CCCGC	4 cut(s)	188, 1168, 2248, 2272
FblI	GTMKAC	1 cut(s)	2131
Fnu4HI	GCNGC	2 cut(s)	2100, 2268
FriOI	GRGCYC	1 cut(s)	1069
Fsp4HI	GCNGC	2 cut(s)	2100, 2268
FspBI	CTAG	3 cut(s)	819, 882, 1806
GlaI	GCGC	1 cut(s)	1830
GluI	GCNGC	2 cut(s)	2100, 2268
GsaI	CCCAGC	4 cut(s)	319, 1079, 1474, 2094
GsuI	CTGGAG	2 cut(s)	341, 1470
HaeIII	GGCC	4 cut(s)	117, 1067, 1139, 2195
HhaI	GCGC	1 cut(s)	1831
Hin6I	GCGC	1 cut(s)	1829
HinP1I	GCGC	1 cut(s)	1829
HindIII	AAGCTT	2 cut(s)	2333, 2453
HinfI	GANTC	6 cut(s)	23, 1096, 1505, 1748, 1790, 2470
HphI	GGTGA	2 cut(s)	298, 1454
Hpy166II	GTNNAC	6 cut(s)	143, 512, 1327, 1713, 1765, 2132
Hpy188III	TCNNGA	3 cut(s)	1534, 2174, 2445
Hpy8I	GTNNAC	6 cut(s)	143, 512, 1327, 1713, 1765, 2132
HpyAV	CCTTC	6 cut(s)	127, 851, 1940, 2173, 2234, 2267
HpyCH4IV	ACGT	1 cut(s)	329
HpyF3I	CTNAG	3 cut(s)	152, 979, 1341
HpySE526I	ACGT	1 cut(s)	329
HspAI	GCGC	1 cut(s)	1829
Kzo9I	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	7 cut(s)	191, 197, 237, 388, 1654, 1774, 2319
Lsp1109I	GCAGC	1 cut(s)	2254
MaeI	CTAG	3 cut(s)	819, 882, 1806
MaeII	ACGT	1 cut(s)	329
MaeIII	GTNAC	7 cut(s)	367, 421, 1029, 1612, 1646, 1732, 2437
MalI	GATC	7 cut(s)	14, 63, 350, 438, 532, 543, 1943
MboI	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
MfeI	CAATTG	1 cut(s)	1317
MflI	RGATCY	1 cut(s)	61
MhlI	GDGCHC	4 cut(s)	264, 393, 514, 1069
MlsI	TGGCCA	1 cut(s)	2195
MluNI	TGGCCA	1 cut(s)	2195
MlyI	GAGTC	2 cut(s)	1090, 1499
MmeI	TCCRAC	4 cut(s)	322, 451, 702, 2292
Mox20I	TGGCCA	1 cut(s)	2195
Mph1103I	ATGCAT	1 cut(s)	1459
MroXI	GAANNNNTTC	2 cut(s)	867, 933
MscI	TGGCCA	1 cut(s)	2195
MseI	TTAA	7 cut(s)	492, 645, 1002, 1308, 2055, 2337, 2415
MslI	CAYNNNNRTG	1 cut(s)	1479
Msp20I	TGGCCA	1 cut(s)	2195
MspA1I	CMGCKG	5 cut(s)	319, 983, 1075, 2090, 2267
MspCI	CTTAAG	1 cut(s)	2414
MspR9I	CCNGG	1 cut(s)	2150
MunI	CAATTG	1 cut(s)	1317
Mva1269I	GAATGC	1 cut(s)	1238
MvaI	CCWGG	1 cut(s)	2150
NdeII	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
NlaIV	GGNNCC	6 cut(s)	63, 239, 1067, 1090, 1656, 1776
NmeAIII	GCCGAG	1 cut(s)	209
NmuCI	GTSAC	2 cut(s)	367, 421
NsiI	ATGCAT	1 cut(s)	1459
NspI	RCATGY	2 cut(s)	500, 1461
PaeI	GCATGC	1 cut(s)	500
PciSI	GCTCTTC	1 cut(s)	924
PctI	GAATGC	1 cut(s)	1238
PdmI	GAANNNNTTC	2 cut(s)	867, 933
PfeI	GAWTC	4 cut(s)	23, 1748, 1790, 2470
PflMI	CCANNNNNTGG	3 cut(s)	58, 2155, 2311
PkrI	GCNGC	2 cut(s)	2101, 2269
PleI	GAGTC	2 cut(s)	1090, 1499
PpsI	GAGTC	2 cut(s)	1090, 1499
Psp6I	CCWGG	1 cut(s)	2148
PspFI	CCCAGC	4 cut(s)	315, 1075, 1470, 2090
PspGI	CCWGG	1 cut(s)	2148
PspN4I	GGNNCC	6 cut(s)	63, 239, 1067, 1090, 1656, 1776
PspOMI	GGGCCC	1 cut(s)	1065
PspPI	GGNCC	5 cut(s)	116, 165, 344, 1065, 1066
PstI	CTGCAG	1 cut(s)	2272
PstNI	CAGNNNCTG	1 cut(s)	1616
PsuI	RGATCY	1 cut(s)	61
PvuII	CAGCTG	4 cut(s)	319, 983, 1075, 2090
RsaI	GTAC	7 cut(s)	37, 268, 954, 987, 1609, 1729, 2381
RsaNI	GTAC	7 cut(s)	36, 267, 953, 986, 1608, 1728, 2380
RseI	CAYNNNNRTG	1 cut(s)	1479
Rsr2I	CGGWCCG	1 cut(s)	344
RsrII	CGGWCCG	1 cut(s)	344
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	7 cut(s)	492, 645, 1002, 1308, 2055, 2337, 2415
SatI	GCNGC	2 cut(s)	2100, 2268
Sau3AI	GATC	7 cut(s)	12, 61, 348, 436, 530, 541, 1941
Sau96I	GGNCC	5 cut(s)	116, 165, 344, 1065, 1066
SchI	GAGTC	2 cut(s)	1090, 1499
ScrFI	CCNGG	1 cut(s)	2150
SduI	GDGCHC	4 cut(s)	264, 393, 514, 1069
SfcI	CTRYAG	1 cut(s)	2268
SinI	GGWCC	2 cut(s)	165, 344
SmiMI	CAYNNNNRTG	1 cut(s)	1479
SmlI	CTYRAG	3 cut(s)	2048, 2123, 2414
SmoI	CTYRAG	3 cut(s)	2048, 2123, 2414
SpeI	ACTAGT	1 cut(s)	1805
SphI	GCATGC	1 cut(s)	500
SspMI	CTAG	3 cut(s)	819, 882, 1806
StyD4I	CCNGG	1 cut(s)	2148
TaiI	ACGT	1 cut(s)	332
TaqI	TCGA	3 cut(s)	447, 478, 2473
TaqII	GACCGA	1 cut(s)	361
TatI	WGTACW	3 cut(s)	952, 985, 2379
TauI	GCSGC	1 cut(s)	2102
TfiI	GAWTC	4 cut(s)	23, 1748, 1790, 2470
Tru1I	TTAA	7 cut(s)	492, 645, 1002, 1308, 2055, 2337, 2415
Tru9I	TTAA	7 cut(s)	492, 645, 1002, 1308, 2055, 2337, 2415
TscAI	CASTG	9 cut(s)	269, 340, 1003, 1153, 1432, 1498, 1761, 1864, 2076
TseFI	GTSAC	2 cut(s)	367, 421
TseI	GCWGC	1 cut(s)	2267
Tsp45I	GTSAC	2 cut(s)	367, 421
TspGWI	ACGGA	1 cut(s)	1901
TspRI	CASTG	9 cut(s)	269, 340, 1003, 1153, 1432, 1498, 1761, 1864, 2076
Van91I	CCANNNNNTGG	3 cut(s)	58, 2155, 2311
Vha464I	CTTAAG	1 cut(s)	2414
VneI	GTGCAC	1 cut(s)	510
VpaK11BI	GGWCC	2 cut(s)	165, 344
XapI	RAATTY	5 cut(s)	571, 1207, 1247, 2074, 2347
XceI	RCATGY	2 cut(s)	500, 1461
XcmI	CCANNNNNNNNNTGG	2 cut(s)	316, 1478
XmiI	GTMKAC	1 cut(s)	2131
XmnI	GAANNNNTTC	2 cut(s)	867, 933
XspI	CTAG	3 cut(s)	819, 882, 1806
Zsp2I	ATGCAT	1 cut(s)	1459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.