Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004324.1

Orthogroup ID

OG0003667

Physical Location & Seq

Genomic Coordinates Forward (+)

41914 .. 49954

Gene Structure 8041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004324.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

atgcacggccgtaccaaaactgccctccacaagatggatccaagtcctttcgggtcatcaaaacccgaagcccagttagtaggcccaaatgagaacccgaagggttgtaaacccaccctgagaggttttaggtccattccattcgcccgccgagcaggagcagaagcagaagcagagatggggaagaagaaaagcagagatgggagccatcccagaaccgaaaccgagcactggtcgacggagcaccgtggttttggctttgttcaatttgctgtcacaaccgatgctgatcgctccgtggagctgaagaatggtgtgtctgttggaggtcgaaagattgctgttaagcatgccatgcaccgtgcaccttttgaacaacgaagatcaaagaaagatcaaggttctgaattggatgaaactatgaattcaaaaaatggcaaggatggagacaatcctaaagaggaaaagggtgcttcaaacttggatacaagagagattaaattggataagaccatgaagtcaaagaatgataaggatgctagcaatttgaaaaaggaaaaggatgcttcaaagttggaggaaaaagaaaaaactgtgaaacccagaaaaccagtagcaccatgtaaagatgttgtggcaaaagtgggaggttctgaaaagcagagggttgctaggactgttatatttggttgccttctcaatgctggcatggcggaagatgttcatcgccaagctagggaggttggcgatgtgtgttctataacttatccttttcccaaagaagagcttcaacaacatggtcttgtacaagatggatgcaaaatggatgcctcagctgtactttacaacagtgttaaatcagctcatgcttctgttgcaatgttacaccaaaaggagataaaaggaggaattgtttgggcccgtcagctgggtggggagggttccaagactcggaagtggaagctcattgtcagaaatcttcctttcaaggccaaagtcagtgatatcaaagatatgttttcatctgcgggatttgtctgggaggtttatataccacagaattctgatacagggttgtctaaaggatttgcattcgtcaaattcacacgcagacaagatgcggaaaatgcaataaaaaagttcaatggacaaaaacttcttaaaagaccaattgctgtggactgggctgttcctaagcagatatatggtagtggcaatgacacccttgcttcagaagatggagaaaagggcggaagagatgggggaaatgatagtagcagtgatgattttgagggtgatgctggagatgcatgtaaaaagtcccagcaccttgatgggattgacagtgcttcagatgactccaataccacagagctgaaagacatccctactgaaattgattttgacgaggaagcagacatagcaagaaaagttctaaaaaacttgaccacgccctctggtacagtaactgctgttgataattctgcattgcccaaaggtaacaaggagccaactattgattttgaggaggaagcagacattgcaagaaaagttctaaaaaagtttaccacaccctctggtacagtaactactgttgatgattctgcactgcccgtaaacaacaaggagccaactattgaagaatctgctaatgagactagtaagttatcttccgagactgcgcctaataaattatcttctgaaagtgccagtgcatcagatgttgctaaaccacaaacggaagaagtagatgatttgcatagaacaattttcatcagcaaccttccttttgagatcactaatgaagaagtcaaacaaaggttttctgctttcgggcaagtgcaatcttttgtcccagttcttcatccacttaccaagcgaccaaaaggaactggctttctcaagtttaagacaatagatgcagtgaattctgctgtttcagctgggagtgccgcatctggcttggggatttttctcaagggtagacaactgacagtcttccaggctttggatagaaaatcagctcacgagaaggaagaaaatatggccaaaaaagaggacatagaccaccgcaatctctatttggcaaaggaaggtcttattcttgcgggaactcccgctgcagaaggggtttcagctaatgatatgtcaaaacgccaaattcttctttgcacaaaatttctaaaaacttttggttcagaacatcggccaattgtggagtttgcacttgataatgttcagaaactgagagcacgtcaggtatcacaacaaactcagcagcatgccgctaatggtaatcagaaagaggggcggcaatttgatcactcaaatagagcagatgcccacccaagcaagaagtttgaaaaccggagagacaaaggtgacaagcgaaagctggatgaggtagtaccaaataaagagggtgaagtggaaaatagggcaagtgatggagctgccactgaagggcagagatttcccaagaggcagaagaatggttcagatagaaaggcagaaaagatttcatcaaaaaaagtactgggaggctcatcggtagaaggttcaaaacgtgaaagtcatcatcaagatggcaggaaggctggcggtggaagatcgtttgcaggtgaaatcaaggcagttgatgtgcccacatcaatatcttcgagaaagacaaatgtggaacctaagaagaggaagctgcaggagcaaaattacacggagggaggagaaaacatgatgagaagaaggccgaagaataaagacccaacagggcgggatgttacagataaacttgacatgctgattgaaaaatatagatccacattctcaaatcagaattccttccaaaaaggtggcggaaggcaagattcaattagaaaatggattgattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RRM_1

Protein Analysis

962

Amino Acids

105.97

Weight (kDa)

9.28

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21440
fragaria_vesca	FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_7g06401 FvH4_7g06402 FvH4_7g06403 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280
malus_domestica	MD05G1059700.v1.1 MD10G1067900.v1.1
prunus_persica	Prupe.8G085300_v2.0.a1 Prupe.8G089600_v2.0.a1 Prupe.8G089700_v2.0.a1 Prupe.8G095100_v2.0.a1
pyrus_communis	pycom05g05100 pycom10g05370
rosa_chinensis	RchiOBHm_Chr6g0266121
rosa_laevigata	RLG00000014114
rosa_multiflora	Rmu_sc0004324.1_g000009 Rmu_sc0022087.1_g000001 Rmu_sc0040448.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435210 Rroxscaffold_7G00201960
rosa_rugosa	Rorug06G0024200
rosa_samantha	Rh6AG144800 Rh6BG145400 Rh6CG141900 Rh6DG129700
rosa_wichuraiana	Rw6G012500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2609
AasI	GACNNNNNNGTC	1 cut(s)	517
Acc36I	ACCTGC	1 cut(s)	2609
AccB7I	CCANNNNNTGG	2 cut(s)	34, 2008
AccI	GTMKAC	2 cut(s)	236, 1984
AclWI	GGATC	3 cut(s)	32, 45, 2808
AcoI	YGGCCR	3 cut(s)	7, 2046, 2207
AcsI	RAATTY	7 cut(s)	424, 1060, 1100, 1927, 2160, 2177, 2833
AcuI	CTGAAG	4 cut(s)	326, 1215, 1335, 2481
AfaI	GTAC	7 cut(s)	13, 807, 840, 1462, 1582, 2409, 2535
AfiI	CCNNNNNNNGG	7 cut(s)	34, 231, 736, 928, 951, 2008, 2463
AhlI	ACTAGT	1 cut(s)	1658
AjiI	CACGTC	1 cut(s)	2255
AjnI	CCWGG	1 cut(s)	2001
Alw21I	GWGCWC	4 cut(s)	231, 246, 367, 2254
Alw26I	GTCTC	4 cut(s)	441, 1649, 1670, 2367
Alw44I	GTGCAC	1 cut(s)	363
AlwI	GGATC	3 cut(s)	32, 45, 2808
AlwNI	CAGNNNCTG	2 cut(s)	1469, 2245
AoxI	GGCC	7 cut(s)	7, 82, 918, 990, 2046, 2207, 2744
ApaI	GGGCCC	1 cut(s)	922
ApaLI	GTGCAC	1 cut(s)	363
ApeKI	GCWGC	4 cut(s)	2120, 2278, 2453, 2695
ApoI	RAATTY	7 cut(s)	424, 1060, 1100, 1927, 2160, 2177, 2833
Asp700I	GAANNNNTTC	3 cut(s)	720, 786, 2837
AspLEI	GCGC	1 cut(s)	1684
AspS9I	GGNCC	4 cut(s)	83, 132, 918, 919
AsuHPI	GGTGA	4 cut(s)	1307, 2393, 2435, 2633
AsuNHI	GCTAGC	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	132
BaeGI	GKGCMC	3 cut(s)	367, 922, 2646
BaeI	ACNNNNGTAYC	1 cut(s)	28
BalI	TGGCCA	1 cut(s)	2048
BamHI	GGATCC	1 cut(s)	37
BanII	GRGCYC	1 cut(s)	922
BarI	GAAGNNNNNNTAC	2 cut(s)	1654, 1686
BauI	CACGAG	1 cut(s)	2027
BbsI	GAAGAC	1 cut(s)	1990
Bbv12I	GWGCWC	4 cut(s)	231, 246, 367, 2254
BbvCI	CCTCAGC	1 cut(s)	832
BbvI	GCAGC	4 cut(s)	2107, 2290, 2440, 2682
BceAI	ACGGC	1 cut(s)	22
BciT130I	CCWGG	1 cut(s)	2003
BciVI	GTATCC	1 cut(s)	478
BclI	TGATCA	1 cut(s)	2320
BcoDI	GTCTC	4 cut(s)	441, 1649, 1670, 2367
BcuI	ACTAGT	1 cut(s)	1658
BfaI	CTAG	4 cut(s)	540, 672, 735, 1659
BfmI	CTRYAG	2 cut(s)	2121, 2696
BfuAI	ACCTGC	1 cut(s)	2609
BfuI	GTATCC	1 cut(s)	478
BisI	GCNGC	7 cut(s)	1953, 2121, 2279, 2286, 2312, 2454, 2696
BlsI	GCNGC	7 cut(s)	1954, 2122, 2280, 2287, 2313, 2455, 2697
BmcAI	AGTACT	1 cut(s)	2535
Bme1390I	CCNGG	1 cut(s)	2003
Bme18I	GGWCC	1 cut(s)	132
BmgBI	CACGTC	1 cut(s)	2255
BmgT120I	GGNCC	4 cut(s)	83, 132, 918, 919
BmiI	GGNNCC	7 cut(s)	39, 206, 920, 943, 1509, 1629, 2679
BmrFI	CCNGG	1 cut(s)	2003
BmrI	ACTGGG	4 cut(s)	67, 1192, 1850, 2546
BmtI	GCTAGC	1 cut(s)	543
BmuI	ACTGGG	4 cut(s)	67, 1192, 1850, 2546
BpiI	GAAGAC	1 cut(s)	1990
BpmI	CTGGAG	1 cut(s)	1323
Bpu10I	CCTNAGC	2 cut(s)	832, 1194
BpuEI	CTTGAG	2 cut(s)	1886, 1961
BsaBI	GATNNNNATC	2 cut(s)	288, 723
BsaJI	CCNNGG	2 cut(s)	247, 297
BsaWI	WCCGGW	1 cut(s)	2367
BsaXI	ACNNNNNCTCC	2 cut(s)	897, 927
Bsc4I	CCNNNNNNNGG	7 cut(s)	34, 231, 736, 928, 951, 2008, 2463
Bse1I	ACTGG	8 cut(s)	73, 236, 611, 1187, 1710, 1856, 1897, 2541
Bse3DI	GCAATG	4 cut(s)	885, 1222, 1487, 1539
Bse8I	GATNNNNATC	2 cut(s)	288, 723
BseBI	CCWGG	1 cut(s)	2003
BseDI	CCNNGG	2 cut(s)	247, 297
BseJI	GATNNNNATC	2 cut(s)	288, 723
BseLI	CCNNNNNNNGG	7 cut(s)	34, 231, 736, 928, 951, 2008, 2463
BseMI	GCAATG	4 cut(s)	885, 1222, 1487, 1539
BseMII	CTCAG	4 cut(s)	110, 846, 2237, 2288
BseNI	ACTGG	8 cut(s)	73, 236, 611, 1187, 1710, 1856, 1897, 2541
BseRI	GAGGAG	2 cut(s)	1541, 2736
BseSI	GKGCMC	3 cut(s)	367, 922, 2646
BseX3I	CGGCCG	1 cut(s)	7
BseXI	GCAGC	4 cut(s)	2107, 2290, 2440, 2682
BseYI	CCCAGC	3 cut(s)	928, 1323, 1943
BsgI	GTGCAG	1 cut(s)	1590
Bsh1285I	CGRYCG	1 cut(s)	10
BshFI	GGCC	7 cut(s)	9, 84, 920, 992, 2048, 2209, 2746
BsiEI	CGRYCG	1 cut(s)	10
BsiHKAI	GWGCWC	4 cut(s)	231, 246, 367, 2254
BsiSI	CCGG	1 cut(s)	2368
BslFI	GGGAC	2 cut(s)	1306, 1838
BslI	CCNNNNNNNGG	7 cut(s)	34, 231, 736, 928, 951, 2008, 2463
BsmAI	GTCTC	4 cut(s)	441, 1649, 1670, 2367
BsmFI	GGGAC	2 cut(s)	1306, 1838
BsmI	GAATGC	1 cut(s)	1091
BsnI	GGCC	7 cut(s)	9, 84, 920, 992, 2048, 2209, 2746
Bsp120I	GGGCCC	1 cut(s)	918
Bsp1286I	GDGCHC	6 cut(s)	231, 246, 367, 922, 2254, 2646
Bsp1407I	TGTACA	1 cut(s)	805
Bsp143I	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
BspANI	GGCC	7 cut(s)	9, 84, 920, 992, 2048, 2209, 2746
BspCNI	CTCAG	4 cut(s)	111, 845, 2238, 2287
BspLI	GGNNCC	7 cut(s)	39, 206, 920, 943, 1509, 1629, 2679
BspMAI	CTGCAG	2 cut(s)	2125, 2700
BspMI	ACCTGC	1 cut(s)	2609
BspOI	GCTAGC	1 cut(s)	543
BspPI	GGATC	3 cut(s)	32, 45, 2808
BspQI	GCTCTTC	1 cut(s)	777
BsrDI	GCAATG	4 cut(s)	885, 1222, 1487, 1539
BsrGI	TGTACA	1 cut(s)	805
BsrI	ACTGG	8 cut(s)	73, 236, 611, 1187, 1710, 1856, 1897, 2541
BssECI	CCNNGG	2 cut(s)	247, 297
BssMI	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
BssSI	CACGAG	1 cut(s)	2027
Bst2BI	CACGAG	1 cut(s)	2027
Bst2UI	CCWGG	1 cut(s)	2003
Bst6I	CTCTTC	3 cut(s)	777, 1249, 2681
BstAPI	GCANNNNNTGC	2 cut(s)	355, 1541
BstAUI	TGTACA	1 cut(s)	805
BstC8I	GCNNGC	6 cut(s)	148, 351, 541, 706, 2283, 2599
BstDEI	CTNAG	6 cut(s)	119, 832, 1194, 2246, 2274, 2682
BstDSI	CCRYGG	2 cut(s)	247, 297
BstHHI	GCGC	1 cut(s)	1684
BstKTI	GATC	8 cut(s)	40, 292, 386, 397, 1797, 2323, 2612, 2816
BstMAI	GTCTC	4 cut(s)	441, 1649, 1670, 2367
BstMBI	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
BstMCI	CGRYCG	1 cut(s)	10
BstNI	CCWGG	1 cut(s)	2003
BstNSI	RCATGY	4 cut(s)	353, 1314, 2285, 2797
BstSCI	CCNGG	1 cut(s)	2001
BstSFI	CTRYAG	2 cut(s)	2121, 2696
BstSLI	GKGCMC	3 cut(s)	367, 922, 2646
BstV1I	GCAGC	4 cut(s)	2107, 2290, 2440, 2682
BstV2I	GAAGAC	1 cut(s)	1990
BstX2I	RGATCY	2 cut(s)	37, 2813
BstXI	CCANNNNNNTGG	1 cut(s)	2849
BstYI	RGATCY	2 cut(s)	37, 2813
BstZI	CGGCCG	1 cut(s)	7
BsuI	GTATCC	1 cut(s)	478
BsuRI	GGCC	7 cut(s)	9, 84, 920, 992, 2048, 2209, 2746
BtgI	CCRYGG	2 cut(s)	247, 297
BtgZI	GCGATG	2 cut(s)	710, 762
BtrI	CACGTC	1 cut(s)	2255
BtsI	GCAGTG	3 cut(s)	1285, 1607, 1929
BtsIMutI	CAGTG	9 cut(s)	229, 856, 1006, 1285, 1351, 1607, 1717, 1929, 2457
BveI	ACCTGC	1 cut(s)	2609
Cac8I	GCNNGC	6 cut(s)	148, 351, 541, 706, 2283, 2599
CaiI	CAGNNNCTG	2 cut(s)	1469, 2245
CfoI	GCGC	1 cut(s)	1684
Cfr13I	GGNCC	4 cut(s)	83, 132, 918, 919
Csp6I	GTAC	7 cut(s)	12, 806, 839, 1461, 1581, 2408, 2534
CspCI	CAANNNNNGTGG	2 cut(s)	1158, 1193
CviQI	GTAC	7 cut(s)	12, 806, 839, 1461, 1581, 2408, 2534
DdeI	CTNAG	6 cut(s)	119, 832, 1194, 2246, 2274, 2682
DpnI	GATC	8 cut(s)	39, 291, 385, 396, 1796, 2322, 2611, 2815
DpnII	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
DrdI	GACNNNNNNGTC	1 cut(s)	517
DseDI	GACNNNNNNGTC	1 cut(s)	517
EaeI	YGGCCR	3 cut(s)	7, 2046, 2207
EagI	CGGCCG	1 cut(s)	7
Eam1104I	CTCTTC	3 cut(s)	777, 1249, 2681
EarI	CTCTTC	3 cut(s)	777, 1249, 2681
EciI	GGCGGA	3 cut(s)	728, 1266, 2868
EclXI	CGGCCG	1 cut(s)	7
Eco24I	GRGCYC	1 cut(s)	922
Eco32I	GATATC	1 cut(s)	1006
Eco47I	GGWCC	1 cut(s)	132
Eco52I	CGGCCG	1 cut(s)	7
Eco57I	CTGAAG	4 cut(s)	326, 1215, 1335, 2481
EcoRI	GAATTC	4 cut(s)	424, 1060, 1927, 2833
EcoRII	CCWGG	1 cut(s)	2001
EcoRV	GATATC	1 cut(s)	1006
EcoT22I	ATGCAT	1 cut(s)	1312
EcoT38I	GRGCYC	1 cut(s)	922
FalI	AAGNNNNNCTT	2 cut(s)	771, 803
FaqI	GGGAC	2 cut(s)	1306, 1838
FauI	CCCGC	5 cut(s)	155, 1021, 2101, 2125, 2763
FbaI	TGATCA	1 cut(s)	2320
FblI	GTMKAC	2 cut(s)	236, 1984
Fnu4HI	GCNGC	7 cut(s)	1953, 2121, 2279, 2286, 2312, 2454, 2696
FriOI	GRGCYC	1 cut(s)	922
Fsp4HI	GCNGC	7 cut(s)	1953, 2121, 2279, 2286, 2312, 2454, 2696
FspBI	CTAG	4 cut(s)	540, 672, 735, 1659
GlaI	GCGC	1 cut(s)	1683
GluI	GCNGC	7 cut(s)	1953, 2121, 2279, 2286, 2312, 2454, 2696
GsaI	CCCAGC	3 cut(s)	932, 1327, 1947
GsuI	CTGGAG	1 cut(s)	1323
HaeIII	GGCC	7 cut(s)	9, 84, 920, 992, 2048, 2209, 2746
HapII	CCGG	1 cut(s)	2368
HhaI	GCGC	1 cut(s)	1684
Hin6I	GCGC	1 cut(s)	1682
HinP1I	GCGC	1 cut(s)	1682
HincII	GTYRAC	1 cut(s)	237
HindII	GTYRAC	1 cut(s)	237
HinfI	GANTC	5 cut(s)	949, 1358, 1601, 1643, 2864
HpaII	CCGG	1 cut(s)	2368
HphI	GGTGA	4 cut(s)	1307, 2393, 2435, 2633
Hpy166II	GTNNAC	7 cut(s)	110, 237, 365, 1180, 1566, 1618, 1985
Hpy188III	TCNNGA	3 cut(s)	2027, 2582, 2661
Hpy8I	GTNNAC	7 cut(s)	110, 237, 365, 1180, 1566, 1618, 1985
Hpy99I	CGWCG	1 cut(s)	241
HpyCH4IV	ACGT	2 cut(s)	2254, 2566
HpyF3I	CTNAG	6 cut(s)	119, 832, 1194, 2246, 2274, 2682
HpySE526I	ACGT	2 cut(s)	2254, 2566
HspAI	GCGC	1 cut(s)	1682
Ksp22I	TGATCA	1 cut(s)	2320
Kzo9I	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
LguI	GCTCTTC	1 cut(s)	777
LmnI	GCTCC	9 cut(s)	158, 204, 241, 299, 301, 1507, 1627, 2450, 2701
Lsp1109I	GCAGC	4 cut(s)	2107, 2290, 2440, 2682
MaeI	CTAG	4 cut(s)	540, 672, 735, 1659
MaeII	ACGT	2 cut(s)	2254, 2566
MaeIII	GTNAC	7 cut(s)	274, 882, 1465, 1499, 1585, 2381, 2776
MalI	GATC	8 cut(s)	39, 291, 385, 396, 1796, 2322, 2611, 2815
MboI	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
MfeI	CAATTG	2 cut(s)	1170, 2211
MflI	RGATCY	2 cut(s)	37, 2813
MhlI	GDGCHC	6 cut(s)	231, 246, 367, 922, 2254, 2646
MlsI	TGGCCA	1 cut(s)	2048
MluNI	TGGCCA	1 cut(s)	2048
MlyI	GAGTC	2 cut(s)	943, 1352
MmeI	TCCRAC	2 cut(s)	304, 555
Mox20I	TGGCCA	1 cut(s)	2048
Mph1103I	ATGCAT	1 cut(s)	1312
MroXI	GAANNNNTTC	3 cut(s)	720, 786, 2837
MscI	TGGCCA	1 cut(s)	2048
MseI	TTAA	6 cut(s)	345, 498, 855, 1161, 1908, 2887
MslI	CAYNNNNRTG	2 cut(s)	1332, 2583
Msp20I	TGGCCA	1 cut(s)	2048
MspA1I	CMGCKG	4 cut(s)	836, 928, 1943, 2120
MspI	CCGG	1 cut(s)	2368
MspR9I	CCNGG	1 cut(s)	2003
MunI	CAATTG	2 cut(s)	1170, 2211
Mva1269I	GAATGC	1 cut(s)	1091
MvaI	CCWGG	1 cut(s)	2003
NdeII	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
NheI	GCTAGC	1 cut(s)	539
NlaIV	GGNNCC	7 cut(s)	39, 206, 920, 943, 1509, 1629, 2679
NmeAIII	GCCGAG	1 cut(s)	176
NmuCI	GTSAC	2 cut(s)	274, 2381
NsiI	ATGCAT	1 cut(s)	1312
NspI	RCATGY	4 cut(s)	353, 1314, 2285, 2797
PaeI	GCATGC	2 cut(s)	353, 2285
PaqCI	CACCTGC	1 cut(s)	2609
PciSI	GCTCTTC	1 cut(s)	777
PctI	GAATGC	1 cut(s)	1091
PdmI	GAANNNNTTC	3 cut(s)	720, 786, 2837
PfeI	GAWTC	3 cut(s)	1601, 1643, 2864
PflMI	CCANNNNNTGG	2 cut(s)	34, 2008
PkrI	GCNGC	7 cut(s)	1954, 2122, 2280, 2287, 2313, 2455, 2697
PleI	GAGTC	2 cut(s)	943, 1352
PpsI	GAGTC	2 cut(s)	943, 1352
Psp6I	CCWGG	1 cut(s)	2001
PspFI	CCCAGC	3 cut(s)	928, 1323, 1943
PspGI	CCWGG	1 cut(s)	2001
PspN4I	GGNNCC	7 cut(s)	39, 206, 920, 943, 1509, 1629, 2679
PspOMI	GGGCCC	1 cut(s)	918
PspPI	GGNCC	4 cut(s)	83, 132, 918, 919
PstI	CTGCAG	2 cut(s)	2125, 2700
PstNI	CAGNNNCTG	2 cut(s)	1469, 2245
PsuI	RGATCY	2 cut(s)	37, 2813
PvuII	CAGCTG	3 cut(s)	836, 928, 1943
RsaI	GTAC	7 cut(s)	13, 807, 840, 1462, 1582, 2409, 2535
RsaNI	GTAC	7 cut(s)	12, 806, 839, 1461, 1581, 2408, 2534
RseI	CAYNNNNRTG	2 cut(s)	1332, 2583
SalI	GTCGAC	1 cut(s)	235
SapI	GCTCTTC	1 cut(s)	777
SaqAI	TTAA	6 cut(s)	345, 498, 855, 1161, 1908, 2887
SatI	GCNGC	7 cut(s)	1953, 2121, 2279, 2286, 2312, 2454, 2696
Sau3AI	GATC	8 cut(s)	37, 289, 383, 394, 1794, 2320, 2609, 2813
Sau96I	GGNCC	4 cut(s)	83, 132, 918, 919
ScaI	AGTACT	1 cut(s)	2535
SchI	GAGTC	2 cut(s)	943, 1352
ScrFI	CCNGG	1 cut(s)	2003
SduI	GDGCHC	6 cut(s)	231, 246, 367, 922, 2254, 2646
SfcI	CTRYAG	2 cut(s)	2121, 2696
SinI	GGWCC	1 cut(s)	132
SmiMI	CAYNNNNRTG	2 cut(s)	1332, 2583
SmlI	CTYRAG	2 cut(s)	1901, 1976
SmoI	CTYRAG	2 cut(s)	1901, 1976
SpeI	ACTAGT	1 cut(s)	1658
SphI	GCATGC	2 cut(s)	353, 2285
SspMI	CTAG	4 cut(s)	540, 672, 735, 1659
StyD4I	CCNGG	1 cut(s)	2001
TaiI	ACGT	2 cut(s)	2257, 2569
TaqI	TCGA	3 cut(s)	236, 331, 2660
TatI	WGTACW	3 cut(s)	805, 838, 2533
TauI	GCSGC	3 cut(s)	1955, 2288, 2314
TfiI	GAWTC	3 cut(s)	1601, 1643, 2864
Tru1I	TTAA	6 cut(s)	345, 498, 855, 1161, 1908, 2887
Tru9I	TTAA	6 cut(s)	345, 498, 855, 1161, 1908, 2887
TscAI	CASTG	9 cut(s)	236, 856, 1006, 1285, 1351, 1614, 1717, 1929, 2464
TseFI	GTSAC	2 cut(s)	274, 2381
TseI	GCWGC	4 cut(s)	2120, 2278, 2453, 2695
Tsp45I	GTSAC	2 cut(s)	274, 2381
TspDTI	ATGAA	9 cut(s)	429, 437, 530, 713, 1011, 1762, 1818, 1853, 2511
TspGWI	ACGGA	4 cut(s)	254, 286, 1754, 2729
TspRI	CASTG	9 cut(s)	236, 856, 1006, 1285, 1351, 1614, 1717, 1929, 2464
Van91I	CCANNNNNTGG	2 cut(s)	34, 2008
VneI	GTGCAC	1 cut(s)	363
VpaK11BI	GGWCC	1 cut(s)	132
XapI	RAATTY	7 cut(s)	424, 1060, 1100, 1927, 2160, 2177, 2833
XceI	RCATGY	4 cut(s)	353, 1314, 2285, 2797
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1331
XmiI	GTMKAC	2 cut(s)	236, 1984
XmnI	GAANNNNTTC	3 cut(s)	720, 786, 2837
XspI	CTAG	4 cut(s)	540, 672, 735, 1659
ZrmI	AGTACT	1 cut(s)	2535
Zsp2I	ATGCAT	1 cut(s)	1312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.