Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0040448.1

Orthogroup ID

OG0003667

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 10066

Gene Structure 10066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0040448.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3280 bp

ccgtaccaaaactgccctccacaagatggatccaagtcctaaaaggactttcgggtcatcaaaacccgaagcccagttagtaggcccaaatgagaacccgaagggttgtaaacccaccctgagaggttttaggtccattccattcgcccgccgagcaggagcagaagcagaagcagagatggggaagaagaaaagcagagatgggagccatcccagaaccgaaaccgagcactgtacgtccaccgtcttcgtctccaatttgccctactctttcaccaattcccagctggaggagacgttcagtgaagtcggaccgatcaggcggtgctttatggtcacaaaaaaggggtcgacggagcaccgtggttttggcttcgttcaatttgctgtcacaaccgatgctgatcgctccgttgagctgaagaatggtgtgtctgttggaggtcgaaagattgctgttaagcatgccatgcaccgtgcaccttttgaacaacgaagatcaaagaaagatcaaggttctgaattggatgaaactatgaattcaaaaaatggcaaggatggagacaatcctaaagaggaaaagggtgcttcaaacttggatacaagagagattaaattggataagaccatgaagtcaaagaatgataaggatgctagcaatttgaaaaaggaaaaggatgcttcaaagttggaggaaaaagaaaaaactgtgaaacccagaaaaccagtagcaccatgtaaagatgttgtggcaaaagtgggaggttctgaaaagcagagggttgctaggactgttatatttggttgccttctcaatgctggcatggcggaagatgttcatcgccaagctagggaggttggcgatgtgtgttctataacttatccttttcccaaagaagagcttcaaaaacatggtcttgtacaagatggatgcaaaatggatgcctcagctgtactttacaacagtgttaaatcagctcatgcttctgttgcaatgttacaccaaaaggagataaaaggaggaattgtttgggcccgtcagctgggtggggagggttccaagactcggaagtggaagctcattgtcagaaatcttcctttcaaggccaaagtcagtgatatcaaagatatgttttcatctgcgggatttgtctgggaggtttatataccacagaattctgatacagggttgtctaaaggatttgcattcgtcaaattcacacgcagacaagatgcggaaaatgcaataaaaaagttcaatggacaaaaacttcttaaaagaccaattgctgtggactgggctgttcctaagcagatatatggtagtggcaatgacacccttgcttcagaagatggagaaaagggcggaagagatgggggaaatgatagtagcagtgatgattttgagggtgatgctggagatgcatgtaaaaagtcccagcaccttgatgggattgacagtgcttcagatgactccaataccacagagctgaaagacatccctactgaaattgattttgacgaggaagcagacatagcaagaaaagttctaaaaaacttgaccacgccctctggtacagtaactgctgttgataattctgcattgcccaaaggtaacaaggagccaactattgattttgaggaggaagcagacattgcaagaaaagttctaaaaaagtttaccacaccctctggtacagtaactactgttgatgattctgcactgcccgtaaacaacaaggagccaactattgaagaatctgctaatgagactagtaagttatcttccgagactgcgcctaataaattatcttctgaaagtgccagtgcatcagatgttgctaaaccacaaacggaagaagtagatgatttgcatagaacaattttcatcagcaaccttccttttgagatcactaatgaagaagtcaaacaaaggttttctgctttcgggcaagtgcaatcttttgtcccagttcttcatccacttaccaagcgaccaaaaggaactggctttctcaagtttaagacaatagatgcagtgaattctgctgtttcagctgggagtgccgcatctggcttggggatttttctcaagggtagacaactgacagtcttccaggctttggatagaaaatcagctcacgagaaggaagaaaatatggccaaaaaagaggacatagaccaccgcaatctctatttggcaaaggaaggtcttattcttgcgggaactccagctgcagaaggggtttcagctaatgatatgtcaaaacgccaaatgttggagaggagcaaggcgatgaagcttaaatctccaaattttcatgtttcaaagacaagattagttatgtacaatttgccaaagtccatgactgaaaaacagcttaagaaactttgtatggatgctgttacctcacgagcgaagctacaaaaacctgtgattcgacagataaagtgcttgaaggatgtgaaaaagggaaagattgttgcaaagaaccactctcgcggtgttgctttcattgagtttacagagcaccagcatgcccttgtggctctgagagttcttaacaacaatcctgaaacttttggttcagaacatcggccaattgtggagtttgcacttgataatgttcagaaactgagagcacgtcaggtatcacaacaaactcagcagcatgccgctaatggtaatcagaaagaggggcggcaatttgatcactcaaatagagcagatgcccacccaagcaagaagtttgaaaaccggagagacaaaggtgacaagcgaaagctggatgaggtagtaccaaataaagagggtgaagtggaaaatagggcaagtgatggagctgccactgaagggcagagatttcccaagaggcagaagaatggttcagatagaaaggcagaaaagatttcatcaaaaaaagtactgggaggctcatcggtagaaggttcaaaacgtgaaagtcatcatcaagatggcaggaaggctggcggtggaagatcgtttgcaggtgaaatcaaggcagttgatgcgcccacatcaatatcttcgagaaagacaaatgtggaacctaagaagaggaagctgcaggagcaaaattacacggagggaggagaaaacatgatgagaagaaggccgaagaataaagacccaacagggcgggatgttacagataaacttgacatgctgattgaaaaatatagatccacattctcaaatcagaattccttccaaaaaggtggcggaaggcaagattcaattagaaaatggattgattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RRM_1

Protein Analysis

1092

Amino Acids

120.73

Weight (kDa)

9.5

Isoelectric Point (pI)

38.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21440
fragaria_vesca	FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_2g09800 FvH4_7g06401 FvH4_7g06402 FvH4_7g06403 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280 FvH4_7g12280
malus_domestica	MD05G1059700.v1.1 MD10G1067900.v1.1
prunus_persica	Prupe.8G085300_v2.0.a1 Prupe.8G089600_v2.0.a1 Prupe.8G089700_v2.0.a1 Prupe.8G095100_v2.0.a1
pyrus_communis	pycom05g05100 pycom10g05370
rosa_chinensis	RchiOBHm_Chr6g0266121
rosa_laevigata	RLG00000014114
rosa_multiflora	Rmu_sc0004324.1_g000009 Rmu_sc0022087.1_g000001 Rmu_sc0040448.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435210 Rroxscaffold_7G00201960
rosa_rugosa	Rorug06G0024200
rosa_samantha	Rh6AG144800 Rh6BG145400 Rh6CG141900 Rh6DG129700
rosa_wichuraiana	Rw6G012500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3000
AasI	GACNNNNNNGTC	2 cut(s)	53, 632
Acc36I	ACCTGC	1 cut(s)	3000
AccB7I	CCANNNNNTGG	3 cut(s)	26, 2123, 2279
AccI	GTMKAC	2 cut(s)	351, 2099
AccII	CGCG	1 cut(s)	2503
AclWI	GGATC	3 cut(s)	24, 37, 3199
AcoI	YGGCCR	2 cut(s)	2161, 2598
AcsI	RAATTY	6 cut(s)	539, 1175, 1215, 2042, 2315, 3224
AcuI	CTGAAG	4 cut(s)	441, 1330, 1450, 2872
AfaI	GTAC	9 cut(s)	5, 236, 922, 955, 1577, 1697, 2349, 2800, 2926
AfiI	CCNNNNNNNGG	8 cut(s)	26, 290, 851, 1043, 1066, 2123, 2279, 2854
AflII	CTTAAG	1 cut(s)	2382
AhlI	ACTAGT	1 cut(s)	1773
AjiI	CACGTC	1 cut(s)	2646
AjnI	CCWGG	1 cut(s)	2116
AloI	GAACNNNNNNTCC	2 cut(s)	282, 314
Alw21I	GWGCWC	5 cut(s)	232, 361, 482, 2533, 2645
Alw26I	GTCTC	6 cut(s)	257, 288, 556, 1764, 1785, 2758
Alw44I	GTGCAC	1 cut(s)	478
AlwI	GGATC	3 cut(s)	24, 37, 3199
AlwNI	CAGNNNCTG	2 cut(s)	1584, 2636
AoxI	GGCC	6 cut(s)	83, 1033, 1105, 2161, 2598, 3135
ApaI	GGGCCC	1 cut(s)	1037
ApaLI	GTGCAC	1 cut(s)	478
ApeKI	GCWGC	4 cut(s)	2235, 2669, 2844, 3086
ApoI	RAATTY	6 cut(s)	539, 1175, 1215, 2042, 2315, 3224
ArsI	GACNNNNNNTTYG	4 cut(s)	333, 365, 899, 931
Asp700I	GAANNNNTTC	3 cut(s)	835, 901, 3228
AspLEI	GCGC	2 cut(s)	1799, 3035
AspS9I	GGNCC	5 cut(s)	84, 133, 312, 1033, 1034
AsuHPI	GGTGA	5 cut(s)	266, 1422, 2784, 2826, 3024
AsuNHI	GCTAGC	1 cut(s)	654
AvaII	GGWCC	2 cut(s)	133, 312
BaeGI	GKGCMC	2 cut(s)	482, 1037
BalI	TGGCCA	1 cut(s)	2163
BamHI	GGATCC	1 cut(s)	29
BanII	GRGCYC	1 cut(s)	1037
BarI	GAAGNNNNNNTAC	2 cut(s)	1769, 1801
BauI	CACGAG	2 cut(s)	2142, 2413
BbsI	GAAGAC	2 cut(s)	239, 2105
Bbv12I	GWGCWC	5 cut(s)	232, 361, 482, 2533, 2645
BbvCI	CCTCAGC	1 cut(s)	947
BbvI	GCAGC	4 cut(s)	2222, 2681, 2831, 3073
BciT130I	CCWGG	1 cut(s)	2118
BciVI	GTATCC	1 cut(s)	593
BclI	TGATCA	1 cut(s)	2711
BcoDI	GTCTC	6 cut(s)	257, 288, 556, 1764, 1785, 2758
BcuI	ACTAGT	1 cut(s)	1773
BfaI	CTAG	4 cut(s)	655, 787, 850, 1774
BfmI	CTRYAG	2 cut(s)	2236, 3087
BfrI	CTTAAG	1 cut(s)	2382
BfuAI	ACCTGC	1 cut(s)	3000
BfuI	GTATCC	1 cut(s)	593
BglI	GCCNNNNNGGC	1 cut(s)	2547
BisI	GCNGC	7 cut(s)	2068, 2236, 2670, 2677, 2703, 2845, 3087
BlsI	GCNGC	7 cut(s)	2069, 2237, 2671, 2678, 2704, 2846, 3088
BmcAI	AGTACT	1 cut(s)	2926
Bme1390I	CCNGG	1 cut(s)	2118
Bme18I	GGWCC	2 cut(s)	133, 312
BmgBI	CACGTC	1 cut(s)	2646
BmgT120I	GGNCC	5 cut(s)	84, 133, 312, 1033, 1034
BmiI	GGNNCC	7 cut(s)	31, 207, 1035, 1058, 1624, 1744, 3070
BmrFI	CCNGG	1 cut(s)	2118
BmrI	ACTGGG	4 cut(s)	68, 1307, 1965, 2937
BmtI	GCTAGC	1 cut(s)	658
BmuI	ACTGGG	4 cut(s)	68, 1307, 1965, 2937
BpiI	GAAGAC	2 cut(s)	239, 2105
BpmI	CTGGAG	3 cut(s)	309, 1438, 2215
Bpu10I	CCTNAGC	2 cut(s)	947, 1309
BpuEI	CTTGAG	2 cut(s)	2001, 2076
BsaBI	GATNNNNATC	2 cut(s)	403, 838
BsaJI	CCNNGG	1 cut(s)	362
BsaWI	WCCGGW	1 cut(s)	2758
BsaXI	ACNNNNNCTCC	4 cut(s)	282, 312, 1012, 1042
Bsc4I	CCNNNNNNNGG	8 cut(s)	26, 290, 851, 1043, 1066, 2123, 2279, 2854
Bse1I	ACTGG	7 cut(s)	74, 726, 1302, 1825, 1971, 2012, 2932
Bse3DI	GCAATG	4 cut(s)	1000, 1337, 1602, 1654
Bse8I	GATNNNNATC	2 cut(s)	403, 838
BseBI	CCWGG	1 cut(s)	2118
BseDI	CCNNGG	1 cut(s)	362
BseJI	GATNNNNATC	2 cut(s)	403, 838
BseLI	CCNNNNNNNGG	8 cut(s)	26, 290, 851, 1043, 1066, 2123, 2279, 2854
BseMI	GCAATG	4 cut(s)	1000, 1337, 1602, 1654
BseMII	CTCAG	5 cut(s)	111, 961, 2544, 2628, 2679
BseNI	ACTGG	7 cut(s)	74, 726, 1302, 1825, 1971, 2012, 2932
BseRI	GAGGAG	4 cut(s)	306, 1656, 2300, 3127
BseSI	GKGCMC	2 cut(s)	482, 1037
BseXI	GCAGC	4 cut(s)	2222, 2681, 2831, 3073
BseYI	CCCAGC	4 cut(s)	283, 1043, 1438, 2058
BsgI	GTGCAG	1 cut(s)	1705
Bsh1236I	CGCG	1 cut(s)	2503
BshFI	GGCC	6 cut(s)	85, 1035, 1107, 2163, 2600, 3137
BsiHKAI	GWGCWC	5 cut(s)	232, 361, 482, 2533, 2645
BsiSI	CCGG	1 cut(s)	2759
BslFI	GGGAC	2 cut(s)	1421, 1953
BslI	CCNNNNNNNGG	8 cut(s)	26, 290, 851, 1043, 1066, 2123, 2279, 2854
BsmAI	GTCTC	6 cut(s)	257, 288, 556, 1764, 1785, 2758
BsmBI	CGTCTC	2 cut(s)	257, 288
BsmFI	GGGAC	2 cut(s)	1421, 1953
BsmI	GAATGC	1 cut(s)	1206
BsnI	GGCC	6 cut(s)	85, 1035, 1107, 2163, 2600, 3137
Bsp120I	GGGCCC	1 cut(s)	1033
Bsp1286I	GDGCHC	6 cut(s)	232, 361, 482, 1037, 2533, 2645
Bsp1407I	TGTACA	2 cut(s)	920, 2347
Bsp143I	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
BspANI	GGCC	6 cut(s)	85, 1035, 1107, 2163, 2600, 3137
BspCNI	CTCAG	5 cut(s)	112, 960, 2545, 2629, 2678
BspFNI	CGCG	1 cut(s)	2503
BspLI	GGNNCC	7 cut(s)	31, 207, 1035, 1058, 1624, 1744, 3070
BspMAI	CTGCAG	2 cut(s)	2240, 3091
BspMI	ACCTGC	1 cut(s)	3000
BspOI	GCTAGC	1 cut(s)	658
BspPI	GGATC	3 cut(s)	24, 37, 3199
BspQI	GCTCTTC	1 cut(s)	892
BspTI	CTTAAG	1 cut(s)	2382
BsrDI	GCAATG	4 cut(s)	1000, 1337, 1602, 1654
BsrGI	TGTACA	2 cut(s)	920, 2347
BsrI	ACTGG	7 cut(s)	74, 726, 1302, 1825, 1971, 2012, 2932
BssECI	CCNNGG	1 cut(s)	362
BssMI	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
BssSI	CACGAG	2 cut(s)	2142, 2413
Bst2BI	CACGAG	2 cut(s)	2142, 2413
Bst2UI	CCWGG	1 cut(s)	2118
Bst6I	CTCTTC	3 cut(s)	892, 1364, 3072
BstAFI	CTTAAG	1 cut(s)	2382
BstAPI	GCANNNNNTGC	3 cut(s)	470, 1656, 3030
BstAUI	TGTACA	2 cut(s)	920, 2347
BstC8I	GCNNGC	7 cut(s)	149, 466, 656, 821, 2539, 2674, 2990
BstDEI	CTNAG	7 cut(s)	120, 947, 1309, 2553, 2637, 2665, 3073
BstDSI	CCRYGG	1 cut(s)	362
BstFNI	CGCG	1 cut(s)	2503
BstHHI	GCGC	2 cut(s)	1799, 3035
BstKTI	GATC	9 cut(s)	32, 319, 407, 501, 512, 1912, 2714, 3003, 3207
BstMAI	GTCTC	6 cut(s)	257, 288, 556, 1764, 1785, 2758
BstMBI	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
BstNI	CCWGG	1 cut(s)	2118
BstNSI	RCATGY	5 cut(s)	468, 1429, 2541, 2676, 3188
BstSCI	CCNGG	1 cut(s)	2116
BstSFI	CTRYAG	2 cut(s)	2236, 3087
BstSLI	GKGCMC	2 cut(s)	482, 1037
BstUI	CGCG	1 cut(s)	2503
BstV1I	GCAGC	4 cut(s)	2222, 2681, 2831, 3073
BstV2I	GAAGAC	2 cut(s)	239, 2105
BstX2I	RGATCY	2 cut(s)	29, 3204
BstXI	CCANNNNNNTGG	1 cut(s)	3240
BstYI	RGATCY	2 cut(s)	29, 3204
BsuI	GTATCC	1 cut(s)	593
BsuRI	GGCC	6 cut(s)	85, 1035, 1107, 2163, 2600, 3137
BtgI	CCRYGG	1 cut(s)	362
BtgZI	GCGATG	3 cut(s)	825, 877, 2310
BtrI	CACGTC	1 cut(s)	2646
BtsI	GCAGTG	3 cut(s)	1400, 1722, 2044
BveI	ACCTGC	1 cut(s)	3000
Cac8I	GCNNGC	7 cut(s)	149, 466, 656, 821, 2539, 2674, 2990
CaiI	CAGNNNCTG	2 cut(s)	1584, 2636
CfoI	GCGC	2 cut(s)	1799, 3035
Cfr13I	GGNCC	5 cut(s)	84, 133, 312, 1033, 1034
CpoI	CGGWCCG	1 cut(s)	312
Csp6I	GTAC	9 cut(s)	4, 235, 921, 954, 1576, 1696, 2348, 2799, 2925
CspCI	CAANNNNNGTGG	2 cut(s)	1273, 1308
CspI	CGGWCCG	1 cut(s)	312
CviQI	GTAC	9 cut(s)	4, 235, 921, 954, 1576, 1696, 2348, 2799, 2925
DdeI	CTNAG	7 cut(s)	120, 947, 1309, 2553, 2637, 2665, 3073
DpnI	GATC	9 cut(s)	31, 318, 406, 500, 511, 1911, 2713, 3002, 3206
DpnII	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
DrdI	GACNNNNNNGTC	2 cut(s)	53, 632
DseDI	GACNNNNNNGTC	2 cut(s)	53, 632
EaeI	YGGCCR	2 cut(s)	2161, 2598
Eam1104I	CTCTTC	3 cut(s)	892, 1364, 3072
EarI	CTCTTC	3 cut(s)	892, 1364, 3072
EciI	GGCGGA	3 cut(s)	843, 1381, 3259
Eco24I	GRGCYC	1 cut(s)	1037
Eco32I	GATATC	1 cut(s)	1121
Eco47I	GGWCC	2 cut(s)	133, 312
Eco57I	CTGAAG	4 cut(s)	441, 1330, 1450, 2872
EcoRI	GAATTC	4 cut(s)	539, 1175, 2042, 3224
EcoRII	CCWGG	1 cut(s)	2116
EcoRV	GATATC	1 cut(s)	1121
EcoT22I	ATGCAT	1 cut(s)	1427
EcoT38I	GRGCYC	1 cut(s)	1037
Esp3I	CGTCTC	2 cut(s)	257, 288
FalI	AAGNNNNNCTT	2 cut(s)	886, 918
FaqI	GGGAC	2 cut(s)	1421, 1953
FauI	CCCGC	4 cut(s)	156, 1136, 2216, 3154
FbaI	TGATCA	1 cut(s)	2711
FblI	GTMKAC	2 cut(s)	351, 2099
Fnu4HI	GCNGC	7 cut(s)	2068, 2236, 2670, 2677, 2703, 2845, 3087
FriOI	GRGCYC	1 cut(s)	1037
Fsp4HI	GCNGC	7 cut(s)	2068, 2236, 2670, 2677, 2703, 2845, 3087
FspBI	CTAG	4 cut(s)	655, 787, 850, 1774
GlaI	GCGC	2 cut(s)	1798, 3034
GluI	GCNGC	7 cut(s)	2068, 2236, 2670, 2677, 2703, 2845, 3087
GsaI	CCCAGC	4 cut(s)	287, 1047, 1442, 2062
GsuI	CTGGAG	3 cut(s)	309, 1438, 2215
HaeIII	GGCC	6 cut(s)	85, 1035, 1107, 2163, 2600, 3137
HapII	CCGG	1 cut(s)	2759
HhaI	GCGC	2 cut(s)	1799, 3035
Hin6I	GCGC	2 cut(s)	1797, 3033
HinP1I	GCGC	2 cut(s)	1797, 3033
HincII	GTYRAC	1 cut(s)	352
HindII	GTYRAC	1 cut(s)	352
HindIII	AAGCTT	1 cut(s)	2301
HinfI	GANTC	6 cut(s)	1064, 1473, 1716, 1758, 2438, 3255
HpaII	CCGG	1 cut(s)	2759
HphI	GGTGA	5 cut(s)	266, 1422, 2784, 2826, 3024
Hpy166II	GTNNAC	9 cut(s)	111, 241, 352, 480, 1295, 1681, 1733, 2100, 2524
Hpy188III	TCNNGA	5 cut(s)	2142, 2413, 2574, 2973, 3052
Hpy8I	GTNNAC	9 cut(s)	111, 241, 352, 480, 1295, 1681, 1733, 2100, 2524
Hpy99I	CGWCG	1 cut(s)	356
HpyCH4IV	ACGT	4 cut(s)	237, 297, 2645, 2957
HpyF3I	CTNAG	7 cut(s)	120, 947, 1309, 2553, 2637, 2665, 3073
HpySE526I	ACGT	4 cut(s)	237, 297, 2645, 2957
HspAI	GCGC	2 cut(s)	1797, 3033
Ksp22I	TGATCA	1 cut(s)	2711
Kzo9I	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
LguI	GCTCTTC	1 cut(s)	892
LmnI	GCTCC	9 cut(s)	159, 205, 356, 414, 1622, 1742, 2287, 2841, 3092
Lsp1109I	GCAGC	4 cut(s)	2222, 2681, 2831, 3073
MaeI	CTAG	4 cut(s)	655, 787, 850, 1774
MaeII	ACGT	4 cut(s)	237, 297, 2645, 2957
MaeIII	GTNAC	9 cut(s)	335, 389, 997, 1580, 1614, 1700, 2405, 2772, 3167
MalI	GATC	9 cut(s)	31, 318, 406, 500, 511, 1911, 2713, 3002, 3206
MboI	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
MfeI	CAATTG	2 cut(s)	1285, 2602
MflI	RGATCY	2 cut(s)	29, 3204
MhlI	GDGCHC	6 cut(s)	232, 361, 482, 1037, 2533, 2645
MlsI	TGGCCA	1 cut(s)	2163
MluNI	TGGCCA	1 cut(s)	2163
MlyI	GAGTC	2 cut(s)	1058, 1467
MmeI	TCCRAC	4 cut(s)	290, 419, 670, 2260
Mox20I	TGGCCA	1 cut(s)	2163
Mph1103I	ATGCAT	1 cut(s)	1427
MroXI	GAANNNNTTC	3 cut(s)	835, 901, 3228
MscI	TGGCCA	1 cut(s)	2163
MseI	TTAA	9 cut(s)	460, 613, 970, 1276, 2023, 2305, 2383, 2563, 3278
MslI	CAYNNNNRTG	3 cut(s)	1447, 2536, 2974
Msp20I	TGGCCA	1 cut(s)	2163
MspA1I	CMGCKG	5 cut(s)	287, 951, 1043, 2058, 2235
MspCI	CTTAAG	1 cut(s)	2382
MspI	CCGG	1 cut(s)	2759
MspR9I	CCNGG	1 cut(s)	2118
MunI	CAATTG	2 cut(s)	1285, 2602
Mva1269I	GAATGC	1 cut(s)	1206
MvaI	CCWGG	1 cut(s)	2118
MvnI	CGCG	1 cut(s)	2503
NdeII	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
NheI	GCTAGC	1 cut(s)	654
NlaIV	GGNNCC	7 cut(s)	31, 207, 1035, 1058, 1624, 1744, 3070
NmeAIII	GCCGAG	1 cut(s)	177
NmuCI	GTSAC	3 cut(s)	335, 389, 2772
NsiI	ATGCAT	1 cut(s)	1427
NspI	RCATGY	5 cut(s)	468, 1429, 2541, 2676, 3188
PaeI	GCATGC	3 cut(s)	468, 2541, 2676
PaqCI	CACCTGC	1 cut(s)	3000
PciSI	GCTCTTC	1 cut(s)	892
PctI	GAATGC	1 cut(s)	1206
PdmI	GAANNNNTTC	3 cut(s)	835, 901, 3228
PfeI	GAWTC	4 cut(s)	1716, 1758, 2438, 3255
PflMI	CCANNNNNTGG	3 cut(s)	26, 2123, 2279
PkrI	GCNGC	7 cut(s)	2069, 2237, 2671, 2678, 2704, 2846, 3088
PleI	GAGTC	2 cut(s)	1058, 1467
PpsI	GAGTC	2 cut(s)	1058, 1467
Psp6I	CCWGG	1 cut(s)	2116
PspFI	CCCAGC	4 cut(s)	283, 1043, 1438, 2058
PspGI	CCWGG	1 cut(s)	2116
PspN4I	GGNNCC	7 cut(s)	31, 207, 1035, 1058, 1624, 1744, 3070
PspOMI	GGGCCC	1 cut(s)	1033
PspPI	GGNCC	5 cut(s)	84, 133, 312, 1033, 1034
PstI	CTGCAG	2 cut(s)	2240, 3091
PstNI	CAGNNNCTG	2 cut(s)	1584, 2636
PsuI	RGATCY	2 cut(s)	29, 3204
PvuII	CAGCTG	5 cut(s)	287, 951, 1043, 2058, 2235
RsaI	GTAC	9 cut(s)	5, 236, 922, 955, 1577, 1697, 2349, 2800, 2926
RsaNI	GTAC	9 cut(s)	4, 235, 921, 954, 1576, 1696, 2348, 2799, 2925
RseI	CAYNNNNRTG	3 cut(s)	1447, 2536, 2974
Rsr2I	CGGWCCG	1 cut(s)	312
RsrII	CGGWCCG	1 cut(s)	312
SalI	GTCGAC	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	892
SaqAI	TTAA	9 cut(s)	460, 613, 970, 1276, 2023, 2305, 2383, 2563, 3278
SatI	GCNGC	7 cut(s)	2068, 2236, 2670, 2677, 2703, 2845, 3087
Sau3AI	GATC	9 cut(s)	29, 316, 404, 498, 509, 1909, 2711, 3000, 3204
Sau96I	GGNCC	5 cut(s)	84, 133, 312, 1033, 1034
ScaI	AGTACT	1 cut(s)	2926
SchI	GAGTC	2 cut(s)	1058, 1467
ScrFI	CCNGG	1 cut(s)	2118
SduI	GDGCHC	6 cut(s)	232, 361, 482, 1037, 2533, 2645
SfcI	CTRYAG	2 cut(s)	2236, 3087
SinI	GGWCC	2 cut(s)	133, 312
SmiMI	CAYNNNNRTG	3 cut(s)	1447, 2536, 2974
SmlI	CTYRAG	3 cut(s)	2016, 2091, 2382
SmoI	CTYRAG	3 cut(s)	2016, 2091, 2382
SpeI	ACTAGT	1 cut(s)	1773
SphI	GCATGC	3 cut(s)	468, 2541, 2676
SspMI	CTAG	4 cut(s)	655, 787, 850, 1774
StyD4I	CCNGG	1 cut(s)	2116
TaiI	ACGT	4 cut(s)	240, 300, 2648, 2960
TaqI	TCGA	4 cut(s)	351, 446, 2441, 3051
TaqII	GACCGA	1 cut(s)	329
TatI	WGTACW	4 cut(s)	920, 953, 2347, 2924
TauI	GCSGC	3 cut(s)	2070, 2679, 2705
TfiI	GAWTC	4 cut(s)	1716, 1758, 2438, 3255
Tru1I	TTAA	9 cut(s)	460, 613, 970, 1276, 2023, 2305, 2383, 2563, 3278
Tru9I	TTAA	9 cut(s)	460, 613, 970, 1276, 2023, 2305, 2383, 2563, 3278
TseFI	GTSAC	3 cut(s)	335, 389, 2772
TseI	GCWGC	4 cut(s)	2235, 2669, 2844, 3086
Tsp45I	GTSAC	3 cut(s)	335, 389, 2772
TspGWI	ACGGA	4 cut(s)	369, 401, 1869, 3120
Van91I	CCANNNNNTGG	3 cut(s)	26, 2123, 2279
Vha464I	CTTAAG	1 cut(s)	2382
VneI	GTGCAC	1 cut(s)	478
VpaK11BI	GGWCC	2 cut(s)	133, 312
XapI	RAATTY	6 cut(s)	539, 1175, 1215, 2042, 2315, 3224
XceI	RCATGY	5 cut(s)	468, 1429, 2541, 2676, 3188
XcmI	CCANNNNNNNNNTGG	2 cut(s)	284, 1446
XmiI	GTMKAC	2 cut(s)	351, 2099
XmnI	GAANNNNTTC	3 cut(s)	835, 901, 3228
XspI	CTAG	4 cut(s)	655, 787, 850, 1774
ZrmI	AGTACT	1 cut(s)	2926
Zsp2I	ATGCAT	1 cut(s)	1427

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.