zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT2G32930 AT2G32930 AT2G32930 |
| fragaria_vesca | FvH4_3g13621 FvH4_6g42010 FvH4_6g42010 |
| malus_domestica | MD03G1135600.v1.1 MD03G1279200.v1.1 MD03G1279800.v1.1 MD05G1053000.v1.1 MD06G1100700.v1.1 MD09G1115400.v1.1 MD10G1110500.v1.1 MD17G1107000.v1.1 |
| prunus_persica | Prupe.3G209200_v2.0.a1 Prupe.3G209200_v2.0.a1 |
| pyrus_communis | pycom09g03970 pycom09g03980 pycom17g09960 |
| rosa_chinensis | RchiOBHm_Chr2g0157941 |
| rosa_laevigata | RLG00000021036 |
| rosa_multiflora | Rmu_sc0011758.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00091850 |
| rosa_rugosa | Rorug01G0068500 Rorug02G0304500.1 Rorug02G0464400 |
| rosa_samantha | Rh2AG529800 Rh2BG544500 Rh2CG514200 Rh2DG552800 Rh5BG160500 |
| rosa_wichuraiana | Rw2G043860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 46 |
| Acc36I | ACCTGC | 1 cut(s) | 46 |
| AciI | CCGC | 2 cut(s) | 160, 192 |
| AfaI | GTAC | 1 cut(s) | 215 |
| AluBI | AGCT | 1 cut(s) | 20 |
| AluI | AGCT | 1 cut(s) | 20 |
| Alw21I | GWGCWC | 1 cut(s) | 63 |
| Alw44I | GTGCAC | 1 cut(s) | 59 |
| ApaLI | GTGCAC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| BaeGI | GKGCMC | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 1 cut(s) | 63 |
| BccI | CCATC | 1 cut(s) | 128 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BfuAI | ACCTGC | 1 cut(s) | 46 |
| BmsI | GCATC | 1 cut(s) | 75 |
| Bpu10I | CCTNAGC | 1 cut(s) | 201 |
| Bsa29I | ATCGAT | 1 cut(s) | 223 |
| BseCI | ATCGAT | 1 cut(s) | 223 |
| BseMII | CTCAG | 3 cut(s) | 12, 119, 215 |
| BseSI | GKGCMC | 1 cut(s) | 63 |
| BshVI | ATCGAT | 1 cut(s) | 223 |
| BsiHKAI | GWGCWC | 1 cut(s) | 63 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BsmI | GAATGC | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 63 |
| Bsp143I | GATC | 2 cut(s) | 220, 224 |
| BspACI | CCGC | 2 cut(s) | 160, 192 |
| BspCNI | CTCAG | 3 cut(s) | 13, 118, 214 |
| BspDI | ATCGAT | 1 cut(s) | 223 |
| BspMI | ACCTGC | 1 cut(s) | 46 |
| BssMI | GATC | 2 cut(s) | 220, 224 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 2 cut(s) | 63, 102 |
| BstDEI | CTNAG | 3 cut(s) | 21, 105, 201 |
| BstKTI | GATC | 2 cut(s) | 223, 227 |
| BstMBI | GATC | 2 cut(s) | 220, 224 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 101 |
| BstSLI | GKGCMC | 1 cut(s) | 63 |
| Bsu15I | ATCGAT | 1 cut(s) | 223 |
| BsuTUI | ATCGAT | 1 cut(s) | 223 |
| BveI | ACCTGC | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 2 cut(s) | 63, 102 |
| ClaI | ATCGAT | 1 cut(s) | 223 |
| CseI | GACGC | 1 cut(s) | 101 |
| Csp6I | GTAC | 1 cut(s) | 214 |
| CviJI | RGCY | 3 cut(s) | 20, 104, 200 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 104, 200 |
| CviQI | GTAC | 1 cut(s) | 214 |
| DdeI | CTNAG | 3 cut(s) | 21, 105, 201 |
| DpnI | GATC | 2 cut(s) | 222, 226 |
| DpnII | GATC | 2 cut(s) | 220, 224 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| FauI | CCCGC | 1 cut(s) | 185 |
| FspBI | CTAG | 1 cut(s) | 228 |
| HapII | CCGG | 1 cut(s) | 89 |
| HgaI | GACGC | 1 cut(s) | 101 |
| HincII | GTYRAC | 1 cut(s) | 165 |
| HindII | GTYRAC | 1 cut(s) | 165 |
| HinfI | GANTC | 1 cut(s) | 124 |
| HpaII | CCGG | 1 cut(s) | 89 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 2 cut(s) | 61, 165 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 123, 133 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 2 cut(s) | 61, 165 |
| HpyCH4IV | ACGT | 1 cut(s) | 141 |
| HpyCH4V | TGCA | 2 cut(s) | 61, 233 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 101 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 105, 201 |
| HpySE526I | ACGT | 1 cut(s) | 141 |
| Kzo9I | GATC | 2 cut(s) | 220, 224 |
| LpnPI | CCDG | 5 cut(s) | 41, 86, 102, 188, 231 |
| LweI | GCATC | 1 cut(s) | 75 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MaeII | ACGT | 1 cut(s) | 141 |
| MalI | GATC | 2 cut(s) | 222, 226 |
| MboI | GATC | 2 cut(s) | 220, 224 |
| MboII | GAAGA | 3 cut(s) | 37, 121, 158 |
| MhlI | GDGCHC | 1 cut(s) | 63 |
| MlyI | GAGTC | 1 cut(s) | 133 |
| MnlI | CCTC | 2 cut(s) | 29, 142 |
| MspI | CCGG | 1 cut(s) | 89 |
| Mva1269I | GAATGC | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 101 |
| NdeII | GATC | 2 cut(s) | 220, 224 |
| NmeAIII | GCCGAG | 1 cut(s) | 76 |
| PaqCI | CACCTGC | 1 cut(s) | 46 |
| PctI | GAATGC | 1 cut(s) | 118 |
| PleI | GAGTC | 1 cut(s) | 132 |
| PpsI | GAGTC | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 215 |
| RsaNI | GTAC | 1 cut(s) | 214 |
| Sau3AI | GATC | 2 cut(s) | 220, 224 |
| SchI | GAGTC | 1 cut(s) | 133 |
| SduI | GDGCHC | 1 cut(s) | 63 |
| SetI | ASST | 4 cut(s) | 22, 60, 144, 239 |
| SfaNI | GCATC | 1 cut(s) | 75 |
| SsiI | CCGC | 2 cut(s) | 160, 192 |
| SspMI | CTAG | 1 cut(s) | 228 |
| TaiI | ACGT | 1 cut(s) | 144 |
| TaqI | TCGA | 1 cut(s) | 223 |
| VneI | GTGCAC | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 228 |