Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002970

Physical Location & Seq

Genomic Coordinates Reverse (-)

59576799 .. 59578469

Gene Structure 1671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0464400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAGTAAGGCATATGACAGAGTCGAGTGGGAGTTTCTGGAAGCAGTTATGTTGAAGATGGGGTTCTGTAATGTGTGGGTTAATTGGGTTATGGCTTCTGTTCGTACAGTCTCCTACTCTTTCATTGTTAATGGTGACCCTAGGGGCCGAATTATTCCATCCAAGGGTCTACTACAAGGAGATGCTATTTCACCTTATCTTTTTCTTCTTGTTGCTGAGGCCTTATTGAGGTTAATTATGGTTGCAGAAAGGGATGACAGATTTCACGATATGGAGGTTTGTAGGGGTGCACCAAGTATTAGCCACTTATTTTTTGCAGACGATTCCTTTATTTTTTTCAAAGCTGAGGCAGCAGAATGTATGGTTTTGAAGGGGATTCTCCAGGACTATGAAAATGCATCTGGCCAGCAGGTTAACCTTCAAAAGAGCTGCATCTCATTTAGTAAGAATGTGGCGTTGGACTGTCAAGAGGAACTTGCATCATTATTGGGTGTTACAAGGGTAGAGAAGCATGATAAATACCTTGGGTTGCCAACAGAGATAAGTTATTCAAAGGAGGAAGCGTTTGCATTTTTGAATGAAAAGATTAGAGCCCGTACGCAAGGTTGGAGAGAAAAAACATTATCGGTAGCTGGAAGAGAAGTCTTGATTAAAGCAGTTGCACAAGCCATTCCCTCTTATGTGATGAGTTGCTTCGAATTACCCAAACATTTGTGTAATGAGATGCAACAATTAATGGCTCATTTTTGGTGGGGAGGATCAGAGGATGAGAAGAAGATTCATTGGGTCTCTTGGGAGAAATTATGTCGCCCAAAAGTGGAGGGAGGTATGGGTTTTCGGAACATGCATTGCTTTAACCTAGCTCTCTTGGCTAAACAAGGGTGGAGGTTGATACAAAAGCCAAACTCTTTAATTGCTTGTGTTTTGAAGGCCAAATATTTCCCCCATTGTTCTTTCATGGCAGCGGAGATGAAGAAGGGTTCGTCATATACATGGCGTAGTATTATGGCGGGACGGGAAGTGCTACGTCAAGGAGTCCGTTATCAGGTTGGAGATGGGAGTACTATTTCTTTGTGGTATGACCCCTGGATGCCCATGCCTAGTTCTTTTAGACCGTCCTCTCCTATAATGGAGGGCACTGAAAATTGGGTAGTTGCAGATGTCATAGATGCCGACGATAAGGAGTGGGTTGTTGATGTTCTGAGTGAGCTTTTTACGGAGATGGAGGTCACTAAGATAGCAGCTATTCCCTTGAGTATTAGACCGGCAGAAGACAGAATGGTATGGCATTATGATGGCAAGGGTGTGTACAACGTAAGAAGTGGGTATCATGTAATGGTTAATTCCTTGAGAAGTCATGCATGGGCGTCAACATCTAGCTTAATTGCTGGTGGTCAATTAAGGAGCTACTGGAACAAATTGTGGCAAGTTAATGTGCCACCAAAAGTCAAAGTCTTCACATGGCGCTTGTTGAATGGAGCCCTTCCCACCAGGTCTGCACTTTTTTCACGTAACATTCCTTTACATGATATTACATGTGTTTTCTGCTGCAATTCGGTGGAGACCGAGAAGCACTTATTTAAAGATTGCATGGCACTCCAATGCTTTTGGAATTTCTGTCCATTAAAGTTAAAGCCTAAAAATCATGTTGCTGCTGATGTGAAGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

556

Amino Acids

63.42

Weight (kDa)

8.44

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	2 - 168	1.7e-12	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	466 - 537	3.2e-16	zinc-binding in reverse transcriptase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002970)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT1G04990 AT2G32930 AT2G32930 AT2G32930
fragaria_vesca	FvH4_3g13621 FvH4_6g42010 FvH4_6g42010
malus_domestica	MD03G1135600.v1.1 MD03G1279200.v1.1 MD03G1279800.v1.1 MD05G1053000.v1.1 MD06G1100700.v1.1 MD09G1115400.v1.1 MD10G1110500.v1.1 MD17G1107000.v1.1
prunus_persica	Prupe.3G209200_v2.0.a1 Prupe.3G209200_v2.0.a1
pyrus_communis	pycom09g03970 pycom09g03980 pycom17g09960
rosa_chinensis	RchiOBHm_Chr2g0157941
rosa_laevigata	RLG00000021036
rosa_multiflora	Rmu_sc0011758.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091850
rosa_rugosa	Rorug01G0068500 Rorug02G0304500.1 Rorug02G0464400
rosa_samantha	Rh2AG529800 Rh2BG544500 Rh2CG514200 Rh2DG552800 Rh5BG160500
rosa_wichuraiana	Rw2G043860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	400
AccI	GTMKAC	1 cut(s)	169
AciI	CCGC	2 cut(s)	965, 1010
AclWI	GGATC	1 cut(s)	766
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	1 cut(s)	1612
AcyI	GRCGYC	1 cut(s)	1367
AfaI	GTAC	4 cut(s)	106, 598, 1063, 1310
AfiI	CCNNNNNNNGG	4 cut(s)	164, 228, 817, 1045
AflIII	ACRYGT	1 cut(s)	1535
AgsI	TTSAA	8 cut(s)	55, 340, 370, 422, 552, 577, 928, 1474
AjnI	CCWGG	3 cut(s)	381, 1085, 1490
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
AluBI	AGCT	8 cut(s)	344, 429, 632, 863, 1210, 1244, 1380, 1407
AluI	AGCT	8 cut(s)	344, 429, 632, 863, 1210, 1244, 1380, 1407
Alw21I	GWGCWC	1 cut(s)	292
Alw26I	GTCTC	3 cut(s)	115, 793, 1556
Alw44I	GTGCAC	1 cut(s)	288
AlwI	GGATC	1 cut(s)	766
AoxI	GGCC	5 cut(s)	145, 219, 403, 930, 1665
ApaLI	GTGCAC	1 cut(s)	288
ApeKI	GCWGC	6 cut(s)	350, 429, 962, 1241, 1548, 1652
ApoI	RAATTY	1 cut(s)	1612
AseI	ATTAAT	1 cut(s)	734
AspA2I	CCTAGG	1 cut(s)	140
AspLEI	GCGC	1 cut(s)	1467
AspS9I	GGNCC	1 cut(s)	145
AsuHPI	GGTGA	2 cut(s)	146, 183
AsuII	TTCGAA	1 cut(s)	696
AvrII	CCTAGG	1 cut(s)	140
BaeGI	GKGCMC	2 cut(s)	292, 1139
BalI	TGGCCA	1 cut(s)	405
BanII	GRGCYC	2 cut(s)	595, 1483
BbsI	GAAGAC	2 cut(s)	1278, 1447
Bbv12I	GWGCWC	1 cut(s)	292
BbvCI	CCTCAGC	2 cut(s)	216, 345
BbvI	GCAGC	6 cut(s)	362, 416, 974, 1253, 1535, 1639
BccI	CCATC	5 cut(s)	52, 166, 1049, 1216, 1289
BciT130I	CCWGG	3 cut(s)	383, 1087, 1492
BcoDI	GTCTC	3 cut(s)	115, 793, 1556
BfaI	CTAG	5 cut(s)	141, 860, 1101, 1377, 1669
BfoI	RGCGCY	1 cut(s)	1468
BfuAI	ACCTGC	1 cut(s)	400
BisI	GCNGC	6 cut(s)	351, 430, 963, 1242, 1549, 1653
BlnI	CCTAGG	1 cut(s)	140
BlsI	GCNGC	6 cut(s)	352, 431, 964, 1243, 1550, 1654
BmcAI	AGTACT	1 cut(s)	1063
Bme1390I	CCNGG	3 cut(s)	383, 1087, 1492
BmgT120I	GGNCC	1 cut(s)	145
BmiI	GGNNCC	2 cut(s)	146, 1480
BmrFI	CCNGG	3 cut(s)	383, 1087, 1492
BmsI	GCATC	7 cut(s)	172, 407, 441, 488, 714, 1080, 1159
BpiI	GAAGAC	2 cut(s)	1278, 1447
BpmI	CTGGAG	1 cut(s)	365
Bpu10I	CCTNAGC	2 cut(s)	216, 345
Bpu14I	TTCGAA	1 cut(s)	696
BpuEI	CTTGAG	2 cut(s)	1273, 1369
BsaAI	YACGTR	1 cut(s)	1511
BsaHI	GRCGYC	1 cut(s)	1367
BsaI	GGTCTC	2 cut(s)	793, 1556
BsaJI	CCNNGG	4 cut(s)	140, 162, 523, 1085
BsaXI	ACNNNNNCTCC	2 cut(s)	548, 578
Bsc4I	CCNNNNNNNGG	4 cut(s)	164, 228, 817, 1045
Bse118I	RCCGGY	1 cut(s)	1264
Bse1I	ACTGG	1 cut(s)	1415
Bse3DI	GCAATG	1 cut(s)	847
BseBI	CCWGG	3 cut(s)	383, 1087, 1492
BseDI	CCNNGG	4 cut(s)	140, 162, 523, 1085
BseGI	GGATG	4 cut(s)	158, 259, 772, 1095
BseLI	CCNNNNNNNGG	4 cut(s)	164, 228, 817, 1045
BseMI	GCAATG	1 cut(s)	847
BseMII	CTCAG	3 cut(s)	207, 336, 1193
BseNI	ACTGG	1 cut(s)	1415
BseSI	GKGCMC	2 cut(s)	292, 1139
BseXI	GCAGC	6 cut(s)	362, 416, 974, 1253, 1535, 1639
BsgI	GTGCAG	1 cut(s)	1482
BshFI	GGCC	5 cut(s)	147, 221, 405, 932, 1667
BsiHKAI	GWGCWC	1 cut(s)	292
BsiSI	CCGG	1 cut(s)	1265
BsiWI	CGTACG	1 cut(s)	596
BslFI	GGGAC	1 cut(s)	1026
BslI	CCNNNNNNNGG	4 cut(s)	164, 228, 817, 1045
BsmAI	GTCTC	3 cut(s)	115, 793, 1556
BsmFI	GGGAC	1 cut(s)	1026
BsnI	GGCC	5 cut(s)	147, 221, 405, 932, 1667
Bso31I	GGTCTC	2 cut(s)	793, 1556
Bsp119I	TTCGAA	1 cut(s)	696
Bsp1286I	GDGCHC	4 cut(s)	292, 595, 1139, 1483
Bsp1407I	TGTACA	1 cut(s)	1308
Bsp143I	GATC	1 cut(s)	758
BspACI	CCGC	2 cut(s)	965, 1010
BspANI	GGCC	5 cut(s)	147, 221, 405, 932, 1667
BspCNI	CTCAG	3 cut(s)	208, 337, 1194
BspLI	GGNNCC	2 cut(s)	146, 1480
BspMI	ACCTGC	1 cut(s)	400
BspPI	GGATC	1 cut(s)	766
BspT104I	TTCGAA	1 cut(s)	696
BspTNI	GGTCTC	2 cut(s)	793, 1556
BsrDI	GCAATG	1 cut(s)	847
BsrFI	RCCGGY	1 cut(s)	1264
BsrGI	TGTACA	1 cut(s)	1308
BsrI	ACTGG	1 cut(s)	1415
BssAI	RCCGGY	1 cut(s)	1264
BssECI	CCNNGG	4 cut(s)	140, 162, 523, 1085
BssMI	GATC	1 cut(s)	758
BssNI	GRCGYC	1 cut(s)	1367
BssT1I	CCWWGG	3 cut(s)	140, 162, 523
Bst2UI	CCWGG	3 cut(s)	383, 1087, 1492
Bst4CI	ACNGT	3 cut(s)	109, 464, 1116
Bst6I	CTCTTC	1 cut(s)	631
BstACI	GRCGYC	1 cut(s)	1367
BstAUI	TGTACA	1 cut(s)	1308
BstBAI	YACGTR	1 cut(s)	1511
BstBI	TTCGAA	1 cut(s)	696
BstC8I	GCNNGC	1 cut(s)	407
BstDEI	CTNAG	4 cut(s)	216, 345, 1202, 1233
BstEII	GGTNACC	1 cut(s)	134
BstENI	CCTNNNNNAGG	1 cut(s)	226
BstF5I	GGATG	4 cut(s)	158, 259, 772, 1095
BstH2I	RGCGCY	1 cut(s)	1468
BstHHI	GCGC	1 cut(s)	1467
BstKTI	GATC	1 cut(s)	761
BstMAI	GTCTC	3 cut(s)	115, 793, 1556
BstMBI	GATC	1 cut(s)	758
BstMWI	GCNNNNNNNGC	2 cut(s)	350, 869
BstNI	CCWGG	3 cut(s)	383, 1087, 1492
BstNSI	RCATGY	2 cut(s)	847, 1539
BstPI	GGTNACC	1 cut(s)	134
BstSCI	CCNGG	3 cut(s)	381, 1085, 1490
BstSLI	GKGCMC	2 cut(s)	292, 1139
BstV1I	GCAGC	6 cut(s)	362, 416, 974, 1253, 1535, 1639
BstV2I	GAAGAC	2 cut(s)	1278, 1447
BsuRI	GGCC	5 cut(s)	147, 221, 405, 932, 1667
BtsCI	GGATG	4 cut(s)	158, 259, 772, 1095
BtsIMutI	CAGTG	1 cut(s)	1137
BveI	ACCTGC	1 cut(s)	400
Cac8I	GCNNGC	1 cut(s)	407
CfoI	GCGC	1 cut(s)	1467
Cfr10I	RCCGGY	1 cut(s)	1264
Cfr13I	GGNCC	1 cut(s)	145
CseI	GACGC	1 cut(s)	1356
CsiI	ACCWGGT	1 cut(s)	1490
Csp6I	GTAC	4 cut(s)	105, 597, 1062, 1309
CviQI	GTAC	4 cut(s)	105, 597, 1062, 1309
DdeI	CTNAG	4 cut(s)	216, 345, 1202, 1233
DpnI	GATC	1 cut(s)	760
DpnII	GATC	1 cut(s)	758
DraI	TTTAAA	1 cut(s)	1582
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	1 cut(s)	631
EarI	CTCTTC	1 cut(s)	631
Eco130I	CCWWGG	3 cut(s)	140, 162, 523
Eco147I	AGGCCT	2 cut(s)	221, 1667
Eco24I	GRGCYC	2 cut(s)	595, 1483
Eco31I	GGTCTC	2 cut(s)	793, 1556
Eco91I	GGTNACC	1 cut(s)	134
EcoNI	CCTNNNNNAGG	1 cut(s)	226
EcoO65I	GGTNACC	1 cut(s)	134
EcoRII	CCWGG	3 cut(s)	381, 1085, 1490
EcoT14I	CCWWGG	3 cut(s)	140, 162, 523
EcoT22I	ATGCAT	3 cut(s)	400, 849, 1363
EcoT38I	GRGCYC	2 cut(s)	595, 1483
ErhI	CCWWGG	3 cut(s)	140, 162, 523
FalI	AAGNNNNNCTT	2 cut(s)	459, 491
FaqI	GGGAC	1 cut(s)	1026
FauI	CCCGC	1 cut(s)	1003
FauNDI	CATATG	1 cut(s)	13
FblI	GTMKAC	1 cut(s)	169
Fnu4HI	GCNGC	6 cut(s)	351, 430, 963, 1242, 1549, 1653
FokI	GGATG	4 cut(s)	145, 266, 779, 1102
FriOI	GRGCYC	2 cut(s)	595, 1483
Fsp4HI	GCNGC	6 cut(s)	351, 430, 963, 1242, 1549, 1653
FspBI	CTAG	5 cut(s)	141, 860, 1101, 1377, 1669
GlaI	GCGC	1 cut(s)	1466
GluI	GCNGC	6 cut(s)	351, 430, 963, 1242, 1549, 1653
GsuI	CTGGAG	1 cut(s)	365
HaeII	RGCGCY	1 cut(s)	1468
HaeIII	GGCC	5 cut(s)	147, 221, 405, 932, 1667
HapII	CCGG	1 cut(s)	1265
HgaI	GACGC	1 cut(s)	1356
HhaI	GCGC	1 cut(s)	1467
Hin1I	GRCGYC	1 cut(s)	1367
Hin6I	GCGC	1 cut(s)	1465
HinP1I	GCGC	1 cut(s)	1465
HincII	GTYRAC	2 cut(s)	415, 1371
HindII	GTYRAC	2 cut(s)	415, 1371
HinfI	GANTC	5 cut(s)	21, 323, 376, 778, 1035
HpaI	GTTAAC	1 cut(s)	415
HpaII	CCGG	1 cut(s)	1265
HphI	GGTGA	2 cut(s)	146, 183
Hpy166II	GTNNAC	5 cut(s)	170, 290, 415, 1309, 1371
Hpy188I	TCNGA	3 cut(s)	763, 840, 1203
Hpy188III	TCNNGA	4 cut(s)	38, 266, 467, 646
Hpy8I	GTNNAC	5 cut(s)	170, 290, 415, 1309, 1371
Hpy99I	CGWCG	1 cut(s)	1178
HpyAV	CCTTC	6 cut(s)	364, 428, 922, 970, 1493, 1657
HpyCH4III	ACNGT	3 cut(s)	109, 464, 1116
HpyCH4IV	ACGT	3 cut(s)	1027, 1314, 1510
HpyF10VI	GCNNNNNNNGC	2 cut(s)	350, 869
HpyF3I	CTNAG	4 cut(s)	216, 345, 1202, 1233
HpySE526I	ACGT	3 cut(s)	1027, 1314, 1510
Hsp92I	GRCGYC	1 cut(s)	1367
HspAI	GCGC	1 cut(s)	1465
KspAI	GTTAAC	1 cut(s)	415
Kzo9I	GATC	1 cut(s)	758
LmnI	GCTCC	2 cut(s)	1404, 1478
Lsp1109I	GCAGC	6 cut(s)	362, 416, 974, 1253, 1535, 1639
LweI	GCATC	7 cut(s)	172, 407, 441, 488, 714, 1080, 1159
MabI	ACCWGGT	1 cut(s)	1490
MaeI	CTAG	5 cut(s)	141, 860, 1101, 1377, 1669
MaeII	ACGT	3 cut(s)	1027, 1314, 1510
MaeIII	GTNAC	4 cut(s)	134, 493, 1228, 1511
MalI	GATC	1 cut(s)	760
MboI	GATC	1 cut(s)	758
MboII	GAAGA	8 cut(s)	67, 197, 648, 784, 787, 985, 1283, 1447
MhlI	GDGCHC	4 cut(s)	292, 595, 1139, 1483
MlsI	TGGCCA	1 cut(s)	405
MluNI	TGGCCA	1 cut(s)	405
MlyI	GAGTC	2 cut(s)	30, 1044
MmeI	TCCRAC	3 cut(s)	438, 587, 1030
Mox20I	TGGCCA	1 cut(s)	405
Mph1103I	ATGCAT	3 cut(s)	400, 849, 1363
MscI	TGGCCA	1 cut(s)	405
MslI	CAYNNNNRTG	3 cut(s)	991, 1293, 1600
Msp20I	TGGCCA	1 cut(s)	405
MspA1I	CMGCKG	1 cut(s)	965
MspI	CCGG	1 cut(s)	1265
MspR9I	CCNGG	3 cut(s)	383, 1087, 1492
MvaI	CCWGG	3 cut(s)	383, 1087, 1492
MwoI	GCNNNNNNNGC	2 cut(s)	350, 869
NdeI	CATATG	1 cut(s)	13
NdeII	GATC	1 cut(s)	758
NlaIV	GGNNCC	2 cut(s)	146, 1480
NmuCI	GTSAC	2 cut(s)	134, 1228
NsiI	ATGCAT	3 cut(s)	400, 849, 1363
NspI	RCATGY	2 cut(s)	847, 1539
NspV	TTCGAA	1 cut(s)	696
PceI	AGGCCT	2 cut(s)	221, 1667
PciI	ACATGT	1 cut(s)	1535
PfeI	GAWTC	3 cut(s)	323, 376, 778
Pfl23II	CGTACG	1 cut(s)	596
PflFI	GACNNNGTC	1 cut(s)	20
PfoI	TCCNGGA	1 cut(s)	381
PkrI	GCNGC	6 cut(s)	352, 431, 964, 1243, 1550, 1654
PleI	GAGTC	2 cut(s)	29, 1043
PpsI	GAGTC	2 cut(s)	29, 1043
Ppu21I	YACGTR	1 cut(s)	1511
PscI	ACATGT	1 cut(s)	1535
PshBI	ATTAAT	1 cut(s)	734
Psp6I	CCWGG	3 cut(s)	381, 1085, 1490
PspEI	GGTNACC	1 cut(s)	134
PspGI	CCWGG	3 cut(s)	381, 1085, 1490
PspLI	CGTACG	1 cut(s)	596
PspN4I	GGNNCC	2 cut(s)	146, 1480
PspPI	GGNCC	1 cut(s)	145
PsyI	GACNNNGTC	1 cut(s)	20
RsaI	GTAC	4 cut(s)	106, 598, 1063, 1310
RsaNI	GTAC	4 cut(s)	105, 597, 1062, 1309
RseI	CAYNNNNRTG	3 cut(s)	991, 1293, 1600
SatI	GCNGC	6 cut(s)	351, 430, 963, 1242, 1549, 1653
Sau3AI	GATC	1 cut(s)	758
Sau96I	GGNCC	1 cut(s)	145
ScaI	AGTACT	1 cut(s)	1063
SchI	GAGTC	2 cut(s)	30, 1044
ScrFI	CCNGG	3 cut(s)	383, 1087, 1492
SduI	GDGCHC	4 cut(s)	292, 595, 1139, 1483
SexAI	ACCWGGT	1 cut(s)	1490
SfaNI	GCATC	7 cut(s)	172, 407, 441, 488, 714, 1080, 1159
SfuI	TTCGAA	1 cut(s)	696
SmiMI	CAYNNNNRTG	3 cut(s)	991, 1293, 1600
SmlI	CTYRAG	2 cut(s)	1252, 1348
SmoI	CTYRAG	2 cut(s)	1252, 1348
SseBI	AGGCCT	2 cut(s)	221, 1667
SsiI	CCGC	2 cut(s)	965, 1010
SspI	AATATT	1 cut(s)	938
SspMI	CTAG	5 cut(s)	141, 860, 1101, 1377, 1669
StuI	AGGCCT	2 cut(s)	221, 1667
StyD4I	CCNGG	3 cut(s)	381, 1085, 1490
StyI	CCWWGG	3 cut(s)	140, 162, 523
TaaI	ACNGT	3 cut(s)	109, 464, 1116
TaiI	ACGT	3 cut(s)	1030, 1317, 1513
TaqI	TCGA	2 cut(s)	24, 696
TaqII	GACCGA	1 cut(s)	1580
TatI	WGTACW	2 cut(s)	1061, 1308
TfiI	GAWTC	3 cut(s)	323, 376, 778
TscAI	CASTG	1 cut(s)	1144
TseFI	GTSAC	2 cut(s)	134, 1228
TseI	GCWGC	6 cut(s)	350, 429, 962, 1241, 1548, 1652
Tsp45I	GTSAC	2 cut(s)	134, 1228
TspDTI	ATGAA	6 cut(s)	112, 405, 594, 770, 946, 986
TspGWI	ACGGA	2 cut(s)	1028, 1232
TspRI	CASTG	1 cut(s)	1144
Tth111I	GACNNNGTC	1 cut(s)	20
VneI	GTGCAC	1 cut(s)	288
VspI	ATTAAT	1 cut(s)	734
XagI	CCTNNNNNAGG	1 cut(s)	226
XapI	RAATTY	1 cut(s)	1612
XceI	RCATGY	2 cut(s)	847, 1539
XmaJI	CCTAGG	1 cut(s)	140
XmiI	GTMKAC	1 cut(s)	169
XspI	CTAG	5 cut(s)	141, 860, 1101, 1377, 1669
ZrmI	AGTACT	1 cut(s)	1063
Zsp2I	ATGCAT	3 cut(s)	400, 849, 1363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.