pycom09g19940

Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
20762039 .. 20766430
4392 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g19940.4

Sequence Viewer

Length: 1326 bp
ATGAAGCATGTTGTGTGGTGGTGGTTGTGGTTGGTGACGGTGGCATTGGCGGCTGCGGATGCGAACGGATCCCAGAAATATGAGAAACAGCCATCTTCGTTAGAGTTTCAGTTTGCCGACAAGGAGGATGCGGCGGCAGCAGCGGCGGCGCCTGAGCTCATGGTTGGCCTCACTCTTATCGACTCTGCGGCTTCCAAAGGAGCTGGTTCGTGTCTCTGTTTGGATGGCACATTGCCTGGTTACCATCTTCATGGTGGGTATGGATCGGGTGCAAATAGCTGGCTGATTCAGTTGGAGGGAGGTGGGTGGTGTAATACAATCAAAAATTGTGTTTTCCGTAAAACCACTCGCCGCGGTTCTTCCAAGTACATGGAAAAGCAATTACCGTTCACTGGATTATTGAGCAATAAACCTCAACAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAGCTCCGTTACTGCGACGGGGCATCTTTCAGTGGAGACAGTCAGAATGAGGCTGCACAACTTCAATTTCGAGGGCAAAGGATATGGTTGGCTGCCATGGATGAGTTAATGTCGAAAGGAATGCAGAAAGCTGACAAGGCTTTTCTTTCTGGATGCTCTGCTGGGGGTCTGGCATCCATACTACACTGTGATGAGTTCCGGGACATGTTTCCAGAAACTACCACGGTGAAATGTCTAAGTGATGCTGGAATGTTCCTTGATGCAACTGATGTATCTGGTGGGCACACATTAAGGAATTTTTATGCAGGTGTAGTTAGCTTGCAGGAAGTGCAAAAAAATCTGCCTAAGACTTGTCTCGATCATCTAGACCCAACTTCGGTAATCCTCTGTTTAATTGAATTTGATGCCTATGATGCATGGCAGGTGCAAGCTAGTTTAGCCCCTCGATCTGCTGATCCTCATGGAGTATGGAACGAATGCAAAGGAAATTATGCACTTTGTAACTCATCCCAGATCCAGTTTCTCCAAGCAGACTTCAGAAATCAAATGCTCAATGCTGTTAGTGATTTCTCAAAGTCTAATAAAAACGGATTATTCATAAATTCCTGCTTCGCTCACTGCCAGTCTGAGAGACAAGATACGTGGTTTGCTGATGATTCTCCTCTTCTTGGAAACAGGGCAATTGCTGTGTCTGTTGGAGACTGGTATTTTGATAGAGTGCCGGTTAAAGCTATTGACTGTGCATACCCCTGCGATAACACCTGCCACAATCTTATGTCCAAGTTTGAACGAGTGCCTACGTCCTTGCGTTGGGAAAGTGTTGGTTTCGATAGTTGTTCATGTGTTTATTCGGTGTACAAGTTTTCAACTTGTTAG

Protein Analysis

442

Amino Acids

48.74

Weight (kDa)

5.74

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 746, 862, 1220
Acc36I ACCTGC 3 cut(s) 746, 862, 1220
AccB1I GGYRCC 1 cut(s) 148
AccII CGCG 1 cut(s) 354
AciI CCGC 9 cut(s) 50, 56, 131, 134, 143, 146, 188, 352, 354
AclWI GGATC 5 cut(s) 63, 76, 271, 899, 958
AcsI RAATTY 3 cut(s) 745, 848, 1051
AcuI CTGAAG 1 cut(s) 970
AcyI GRCGYC 1 cut(s) 149
AfaI GTAC 2 cut(s) 368, 1307
AfiI CCNNNNNNNGG 4 cut(s) 392, 826, 1118, 1260
AflIII ACRYGT 1 cut(s) 654
AgsI TTSAA 5 cut(s) 436, 515, 848, 1238, 1317
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 8 cut(s) 157, 203, 279, 454, 581, 768, 881, 1181
AluI AGCT 8 cut(s) 157, 203, 279, 454, 581, 768, 881, 1181
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 5 cut(s) 218, 480, 809, 1075, 1143
AlwI GGATC 5 cut(s) 63, 76, 271, 899, 958
AoxI GGCC 1 cut(s) 166
ApeKI GCWGC 5 cut(s) 53, 137, 140, 503, 542
ApoI RAATTY 3 cut(s) 745, 848, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AspLEI GCGC 1 cut(s) 151
AsuC2I CCSGG 1 cut(s) 650
AsuHPI GGTGA 2 cut(s) 46, 688
BaeGI GKGCMC 1 cut(s) 735
BaeI ACNNNNGTAYC 2 cut(s) 705, 738
BamHI GGATCC 1 cut(s) 68
BanI GGYRCC 1 cut(s) 148
BanII GRGCYC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 5 cut(s) 40, 149, 152, 490, 529
BccI CCATC 3 cut(s) 100, 218, 252
BcgI CGANNNNNNTGC 2 cut(s) 553, 587
BciT130I CCWGG 1 cut(s) 237
BcnI CCSGG 1 cut(s) 650
BcoDI GTCTC 5 cut(s) 218, 480, 809, 1075, 1143
BfaI CTAG 2 cut(s) 815, 882
BfoI RGCGCY 1 cut(s) 152
BfuAI ACCTGC 3 cut(s) 746, 862, 1220
Bme1390I CCNGG 2 cut(s) 237, 650
BmiI GGNNCC 2 cut(s) 70, 150
BmrFI CCNGG 2 cut(s) 237, 650
BmsI GCATC 9 cut(s) 49, 118, 482, 593, 632, 682, 700, 844, 853
BplI GAGNNNNNCTC 2 cut(s) 438, 470
Bpu10I CCTNAGC 1 cut(s) 153
BpuMI CCSGG 1 cut(s) 650
BsaAI YACGTR 1 cut(s) 1092
BsaHI GRCGYC 1 cut(s) 149
BsaJI CCNNGG 3 cut(s) 352, 546, 672
Bsc4I CCNNNNNNNGG 4 cut(s) 392, 826, 1118, 1260
Bse118I RCCGGY 1 cut(s) 1171
Bse1I ACTGG 5 cut(s) 397, 443, 967, 1072, 1157
Bse3DI GCAATG 1 cut(s) 230
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 3 cut(s) 352, 546, 672
BseGI GGATG 7 cut(s) 64, 133, 229, 556, 608, 623, 956
BseLI CCNNNNNNNGG 4 cut(s) 392, 826, 1118, 1260
BseMI GCAATG 1 cut(s) 230
BseMII CTCAG 2 cut(s) 144, 1068
BseNI ACTGG 5 cut(s) 397, 443, 967, 1072, 1157
BseRI GAGGAG 1 cut(s) 1101
BseSI GKGCMC 1 cut(s) 735
BseXI GCAGC 5 cut(s) 40, 149, 152, 490, 529
BseYI CCCAGC 1 cut(s) 611
BsgI GTGCAG 1 cut(s) 489
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 1 cut(s) 168
BshNI GGYRCC 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 159
BsiSI CCGG 2 cut(s) 649, 1172
BslFI GGGAC 1 cut(s) 665
BslI CCNNNNNNNGG 4 cut(s) 392, 826, 1118, 1260
BsmAI GTCTC 5 cut(s) 218, 480, 809, 1075, 1143
BsmFI GGGAC 1 cut(s) 665
BsmI GAATGC 2 cut(s) 576, 932
BsnI GGCC 1 cut(s) 168
Bsp1286I GDGCHC 2 cut(s) 159, 735
Bsp1407I TGTACA 1 cut(s) 1305
Bsp143I GATC 6 cut(s) 68, 263, 808, 896, 904, 963
Bsp19I CCATGG 1 cut(s) 546
BspACI CCGC 9 cut(s) 50, 56, 131, 134, 143, 146, 188, 352, 354
BspANI GGCC 1 cut(s) 168
BspCNI CTCAG 2 cut(s) 145, 1069
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 2 cut(s) 70, 150
BspMI ACCTGC 3 cut(s) 746, 862, 1220
BspPI GGATC 5 cut(s) 63, 76, 271, 899, 958
BspT107I GGYRCC 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 230
BsrFI RCCGGY 1 cut(s) 1171
BsrGI TGTACA 1 cut(s) 1305
BsrI ACTGG 5 cut(s) 397, 443, 967, 1072, 1157
BssAI RCCGGY 1 cut(s) 1171
BssECI CCNNGG 3 cut(s) 352, 546, 672
BssMI GATC 6 cut(s) 68, 263, 808, 896, 904, 963
BssNI GRCGYC 1 cut(s) 149
BssT1I CCWWGG 1 cut(s) 546
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 6 cut(s) 40, 387, 491, 638, 676, 1190
Bst6I CTCTTC 1 cut(s) 1119
BstACI GRCGYC 1 cut(s) 149
BstAPI GCANNNNNTGC 1 cut(s) 778
BstAUI TGTACA 1 cut(s) 1305
BstBAI YACGTR 1 cut(s) 1092
BstC8I GCNNGC 3 cut(s) 281, 770, 879
BstDEI CTNAG 4 cut(s) 153, 686, 795, 1077
BstDSI CCRYGG 3 cut(s) 352, 546, 672
BstEII GGTNACC 1 cut(s) 239
BstF5I GGATG 7 cut(s) 64, 133, 229, 556, 608, 623, 956
BstFNI CGCG 1 cut(s) 354
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 1 cut(s) 151
BstKTI GATC 6 cut(s) 71, 266, 811, 899, 907, 966
BstMAI GTCTC 5 cut(s) 218, 480, 809, 1075, 1143
BstMBI GATC 6 cut(s) 68, 263, 808, 896, 904, 963
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 2 cut(s) 11, 658
BstPI GGTNACC 1 cut(s) 239
BstSCI CCNGG 2 cut(s) 235, 648
BstSLI GKGCMC 1 cut(s) 735
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 5 cut(s) 40, 149, 152, 490, 529
BstX2I RGATCY 2 cut(s) 68, 963
BstXI CCANNNNNNTGG 2 cut(s) 251, 370
BstYI RGATCY 2 cut(s) 68, 963
BsuRI GGCC 1 cut(s) 168
BtgI CCRYGG 3 cut(s) 352, 546, 672
BtsCI GGATG 7 cut(s) 64, 133, 229, 556, 608, 623, 956
BtsI GCAGTG 1 cut(s) 1066
BtsIMutI CAGTG 4 cut(s) 390, 487, 634, 1066
BveI ACCTGC 3 cut(s) 746, 862, 1220
Cac8I GCNNGC 3 cut(s) 281, 770, 879
CfoI GCGC 1 cut(s) 151
Cfr10I RCCGGY 1 cut(s) 1171
Cfr42I CCGCGG 1 cut(s) 355
Csp6I GTAC 2 cut(s) 367, 1306
CspCI CAANNNNNGTGG 2 cut(s) 1073, 1108
CviAII CATG 9 cut(s) 8, 160, 251, 370, 547, 655, 867, 911, 1290
CviQI GTAC 2 cut(s) 367, 1306
DdeI CTNAG 4 cut(s) 153, 686, 795, 1077
DinI GGCGCC 1 cut(s) 150
DpnI GATC 6 cut(s) 70, 265, 810, 898, 906, 965
DpnII GATC 6 cut(s) 68, 263, 808, 896, 904, 963
Eam1104I CTCTTC 1 cut(s) 1119
EarI CTCTTC 1 cut(s) 1119
Ecl136II GAGCTC 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 546
Eco24I GRGCYC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 970
Eco91I GGTNACC 1 cut(s) 239
EcoICRI GAGCTC 1 cut(s) 157
EcoO65I GGTNACC 1 cut(s) 239
EcoRII CCWGG 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 546
EcoT22I ATGCAT 1 cut(s) 868
EcoT38I GRGCYC 1 cut(s) 159
EgeI GGCGCC 1 cut(s) 150
EheI GGCGCC 1 cut(s) 150
ErhI CCWWGG 1 cut(s) 546
FaeI CATG 9 cut(s) 11, 163, 254, 373, 550, 658, 870, 914, 1293
FaqI GGGAC 1 cut(s) 665
FatI CATG 9 cut(s) 7, 159, 250, 369, 546, 654, 866, 910, 1289
FokI GGATG 7 cut(s) 71, 140, 236, 563, 610, 615, 943
FriOI GRGCYC 1 cut(s) 159
FspBI CTAG 2 cut(s) 815, 882
GlaI GCGC 1 cut(s) 150
GsaI CCCAGC 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 152
HaeIII GGCC 1 cut(s) 168
HapII CCGG 2 cut(s) 649, 1172
HhaI GCGC 1 cut(s) 151
Hin1I GRCGYC 1 cut(s) 149
Hin1II CATG 9 cut(s) 11, 163, 254, 373, 550, 658, 870, 914, 1293
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
HinfI GANTC 4 cut(s) 182, 286, 447, 1106
HpaII CCGG 2 cut(s) 649, 1172
HphI GGTGA 2 cut(s) 46, 688
Hpy166II GTNNAC 2 cut(s) 390, 1306
Hpy188I TCNGA 3 cut(s) 495, 989, 1078
Hpy188III TCNNGA 4 cut(s) 600, 662, 806, 815
Hpy8I GTNNAC 2 cut(s) 390, 1306
Hpy99I CGWCG 1 cut(s) 470
HpyCH4III ACNGT 6 cut(s) 40, 387, 491, 638, 676, 1190
HpyCH4IV ACGT 2 cut(s) 1091, 1250
HpyF3I CTNAG 4 cut(s) 153, 686, 795, 1077
HpySE526I ACGT 2 cut(s) 1091, 1250
Hsp92I GRCGYC 1 cut(s) 149
Hsp92II CATG 9 cut(s) 11, 163, 254, 373, 550, 658, 870, 914, 1293
HspAI GCGC 1 cut(s) 149
KasI GGCGCC 1 cut(s) 148
KspI CCGCGG 1 cut(s) 355
Kzo9I GATC 6 cut(s) 68, 263, 808, 896, 904, 963
LmnI GCTCC 2 cut(s) 200, 459
Lsp1109I GCAGC 5 cut(s) 40, 149, 152, 490, 529
LweI GCATC 9 cut(s) 49, 118, 482, 593, 632, 682, 700, 844, 853
MaeI CTAG 2 cut(s) 815, 882
MaeII ACGT 2 cut(s) 1091, 1250
MaeIII GTNAC 4 cut(s) 34, 239, 458, 950
MalI GATC 6 cut(s) 70, 265, 810, 898, 906, 965
MboI GATC 6 cut(s) 68, 263, 808, 896, 904, 963
MboII GAAGA 5 cut(s) 87, 239, 351, 424, 1106
MfeI CAATTG 1 cut(s) 1131
MflI RGATCY 2 cut(s) 68, 963
MhlI GDGCHC 2 cut(s) 159, 735
MluCI AATT 9 cut(s) 325, 380, 515, 745, 843, 848, 937, 1051, 1131
Mly113I GGCGCC 1 cut(s) 149
MlyI GAGTC 2 cut(s) 176, 456
MmeI TCCRAC 2 cut(s) 273, 1126
Mph1103I ATGCAT 1 cut(s) 868
MseI TTAA 4 cut(s) 557, 740, 842, 1176
MslI CAYNNNNRTG 2 cut(s) 249, 639
MspA1I CMGCKG 2 cut(s) 143, 354
MspI CCGG 2 cut(s) 649, 1172
MspR9I CCNGG 2 cut(s) 237, 650
MunI CAATTG 1 cut(s) 1131
Mva1269I GAATGC 2 cut(s) 576, 932
MvaI CCWGG 1 cut(s) 237
MvnI CGCG 1 cut(s) 354
NarI GGCGCC 1 cut(s) 149
NciI CCSGG 1 cut(s) 650
NcoI CCATGG 1 cut(s) 546
NdeII GATC 6 cut(s) 68, 263, 808, 896, 904, 963
NlaIII CATG 9 cut(s) 11, 163, 254, 373, 550, 658, 870, 914, 1293
NlaIV GGNNCC 2 cut(s) 70, 150
NmuCI GTSAC 1 cut(s) 34
NsiI ATGCAT 1 cut(s) 868
NspI RCATGY 2 cut(s) 11, 658
PaqCI CACCTGC 3 cut(s) 746, 862, 1220
PciI ACATGT 1 cut(s) 654
PctI GAATGC 2 cut(s) 576, 932
PfeI GAWTC 2 cut(s) 286, 1106
PfoI TCCNGGA 1 cut(s) 648
PleI GAGTC 2 cut(s) 176, 455
PluTI GGCGCC 1 cut(s) 152
PpsI GAGTC 2 cut(s) 176, 455
Ppu21I YACGTR 1 cut(s) 1092
PscI ACATGT 1 cut(s) 654
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 235
PspEI GGTNACC 1 cut(s) 239
PspFI CCCAGC 1 cut(s) 611
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 2 cut(s) 70, 150
PsuI RGATCY 2 cut(s) 68, 963
RsaI GTAC 2 cut(s) 368, 1307
RsaNI GTAC 2 cut(s) 367, 1306
RseI CAYNNNNRTG 2 cut(s) 249, 639
SacI GAGCTC 1 cut(s) 159
SacII CCGCGG 1 cut(s) 355
SaqAI TTAA 4 cut(s) 557, 740, 842, 1176
Sau3AI GATC 6 cut(s) 68, 263, 808, 896, 904, 963
SchI GAGTC 2 cut(s) 176, 456
ScrFI CCNGG 2 cut(s) 237, 650
SduI GDGCHC 2 cut(s) 159, 735
SfaNI GCATC 9 cut(s) 49, 118, 482, 593, 632, 682, 700, 844, 853
SfoI GGCGCC 1 cut(s) 150
Sfr303I CCGCGG 1 cut(s) 355
SgrBI CCGCGG 1 cut(s) 355
SmiMI CAYNNNNRTG 2 cut(s) 249, 639
Sse9I AATT 9 cut(s) 325, 380, 515, 745, 843, 848, 937, 1051, 1131
SsiI CCGC 9 cut(s) 50, 56, 131, 134, 143, 146, 188, 352, 354
SspDI GGCGCC 1 cut(s) 148
SspMI CTAG 2 cut(s) 815, 882
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 2 cut(s) 235, 648
StyI CCWWGG 1 cut(s) 546
TaaI ACNGT 6 cut(s) 40, 387, 491, 638, 676, 1190
TaiI ACGT 2 cut(s) 1094, 1253
TaqI TCGA 6 cut(s) 180, 520, 563, 807, 895, 1278
TasI AATT 9 cut(s) 325, 380, 515, 745, 843, 848, 937, 1051, 1131
TatI WGTACW 2 cut(s) 366, 1305
TauI GCSGC 7 cut(s) 53, 134, 137, 146, 149, 191, 354
TfiI GAWTC 2 cut(s) 286, 1106
Tru1I TTAA 4 cut(s) 557, 740, 842, 1176
Tru9I TTAA 4 cut(s) 557, 740, 842, 1176
TscAI CASTG 4 cut(s) 397, 487, 641, 1073
TseFI GTSAC 1 cut(s) 34
TseI GCWGC 5 cut(s) 53, 137, 140, 503, 542
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 4 cut(s) 17, 239, 1036, 1278
TspGWI ACGGA 4 cut(s) 81, 326, 446, 1053
TspRI CASTG 4 cut(s) 397, 487, 641, 1073
XapI RAATTY 3 cut(s) 745, 848, 1051
XbaI TCTAGA 1 cut(s) 814
XceI RCATGY 2 cut(s) 11, 658
XcmI CCANNNNNNNNNTGG 1 cut(s) 251
XspI CTAG 2 cut(s) 815, 882
Zsp2I ATGCAT 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.