E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38600 AT4G38600 AT4G38600 |
| fragaria_vesca | FvH4_2g01290 |
| malus_domestica | MD00G1173700.v1.1 MD00G1173800.v1.1 MD00G1173900.v1.1 MD05G1120900.v1.1 MD10G1095300.v1.1 |
| prunus_persica | Prupe.8G164700_v2.0.a1 |
| pyrus_communis | pycom05g11490 pycom05g11500 pycom10g10610 pycom10g10620 |
| rosa_chinensis | RchiOBHm_Chr6g0251951 RchiOBHm_Chr6g0252001 |
| rosa_laevigata | RLG00000015410 RLG00000015417 |
| rosa_multiflora | Rmu_sc0002522.1_g000052 Rmu_sc0002522.1_g000062 Rmu_ssc0000303.1_g000016 |
| rosa_roxburghii | Rroxscaffold_7G00216270 |
| rosa_rugosa | Rorug05G0505300.1 |
| rosa_samantha | Rh6AG016800 Rh6AG017300 Rh6AG017400 Rh6AG018000 Rh6AG018100 Rh6AG018900 Rh6AG019000 Rh6CG011400 Rh6DG012700 |
| rosa_wichuraiana | Rw6G000110 Rw6G000120 Rw6G000150 Rw6G001600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2079, 2925 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1686 |
| AatII | GACGTC | 1 cut(s) | 1690 |
| Acc36I | ACCTGC | 1 cut(s) | 3624 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1520, 3506 |
| AccI | GTMKAC | 2 cut(s) | 1052, 1243 |
| AccII | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| AciI | CCGC | 8 cut(s) | 1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782 |
| AclWI | GGATC | 9 cut(s) | 73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972 |
| AcsI | RAATTY | 7 cut(s) | 36, 150, 364, 2182, 2228, 2268, 2680 |
| AcuI | CTGAAG | 6 cut(s) | 164, 275, 1470, 2402, 3668, 3957 |
| AcyI | GRCGYC | 1 cut(s) | 1687 |
| AdeI | CACNNNGTG | 1 cut(s) | 3506 |
| AjnI | CCWGG | 7 cut(s) | 24, 87, 297, 2786, 3124, 3151, 3502 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3665, 3697 |
| Alw21I | GWGCWC | 4 cut(s) | 802, 862, 2143, 3490 |
| Alw26I | GTCTC | 9 cut(s) | 426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350 |
| Alw44I | GTGCAC | 2 cut(s) | 798, 3486 |
| AlwI | GGATC | 9 cut(s) | 73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 46, 298, 1013, 1034, 1520, 1562 |
| Ama87I | CYCGRG | 2 cut(s) | 954, 3425 |
| AoxI | GGCC | 3 cut(s) | 950, 1895, 2789 |
| ApaLI | GTGCAC | 2 cut(s) | 798, 3486 |
| ApoI | RAATTY | 7 cut(s) | 36, 150, 364, 2182, 2228, 2268, 2680 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 389, 421 |
| AseI | ATTAAT | 1 cut(s) | 681 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 942, 3550 |
| AspLEI | GCGC | 4 cut(s) | 1157, 2405, 3638, 3782 |
| AspS9I | GGNCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| AsuC2I | CCSGG | 2 cut(s) | 2263, 3589 |
| AsuHPI | GGTGA | 6 cut(s) | 188, 2476, 2600, 2759, 3059, 3449 |
| AsuII | TTCGAA | 1 cut(s) | 240 |
| AsuNHI | GCTAGC | 1 cut(s) | 484 |
| AvaI | CYCGRG | 2 cut(s) | 954, 3425 |
| AvaII | GGWCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| BaeGI | GKGCMC | 3 cut(s) | 802, 2600, 3490 |
| BamHI | GGATCC | 1 cut(s) | 3719 |
| BanII | GRGCYC | 2 cut(s) | 2143, 3407 |
| BbsI | GAAGAC | 2 cut(s) | 2294, 2408 |
| Bbv12I | GWGCWC | 4 cut(s) | 802, 862, 2143, 3490 |
| BbvCI | CCTCAGC | 1 cut(s) | 2166 |
| BceAI | ACGGC | 1 cut(s) | 2501 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2144, 2178 |
| BciT130I | CCWGG | 7 cut(s) | 26, 89, 299, 2788, 3126, 3153, 3504 |
| BciVI | GTATCC | 3 cut(s) | 523, 1852, 3383 |
| BclI | TGATCA | 1 cut(s) | 3367 |
| BcnI | CCSGG | 2 cut(s) | 2263, 3589 |
| BcoDI | GTCTC | 9 cut(s) | 426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350 |
| BfmI | CTRYAG | 3 cut(s) | 933, 1026, 1479 |
| BfuAI | ACCTGC | 1 cut(s) | 3624 |
| BfuI | GTATCC | 3 cut(s) | 523, 1852, 3383 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1631 |
| BlpI | GCTNAGC | 2 cut(s) | 1566, 2979 |
| BmcAI | AGTACT | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 9 cut(s) | 26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589 |
| Bme18I | GGWCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| BmeT110I | CYCGRG | 2 cut(s) | 954, 3425 |
| BmgT120I | GGNCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| BmiI | GGNNCC | 5 cut(s) | 1137, 2610, 3586, 3721, 3853 |
| BmrFI | CCNGG | 9 cut(s) | 26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589 |
| BmrI | ACTGGG | 4 cut(s) | 46, 801, 3234, 3615 |
| BmsI | GCATC | 8 cut(s) | 471, 1462, 1768, 1928, 2014, 2266, 2965, 3049 |
| BmtI | GCTAGC | 1 cut(s) | 488 |
| BmuI | ACTGGG | 4 cut(s) | 46, 801, 3234, 3615 |
| BpiI | GAAGAC | 2 cut(s) | 2294, 2408 |
| BpmI | CTGGAG | 3 cut(s) | 216, 1758, 3174 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2166 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1566, 2979 |
| Bpu14I | TTCGAA | 1 cut(s) | 240 |
| BpuEI | CTTGAG | 2 cut(s) | 2215, 2639 |
| BpuMI | CCSGG | 2 cut(s) | 2263, 3589 |
| Bsa29I | ATCGAT | 2 cut(s) | 327, 909 |
| BsaAI | YACGTR | 2 cut(s) | 3008, 3083 |
| BsaBI | GATNNNNATC | 1 cut(s) | 77 |
| BsaHI | GRCGYC | 1 cut(s) | 1687 |
| BsaI | GGTCTC | 2 cut(s) | 426, 3350 |
| BsaJI | CCNNGG | 8 cut(s) | 5, 298, 585, 2786, 3124, 3491, 3588, 3669 |
| BsaWI | WCCGGW | 1 cut(s) | 2511 |
| Bse3DI | GCAATG | 2 cut(s) | 551, 2749 |
| Bse8I | GATNNNNATC | 1 cut(s) | 77 |
| BseBI | CCWGG | 7 cut(s) | 26, 89, 299, 2788, 3126, 3153, 3504 |
| BseCI | ATCGAT | 2 cut(s) | 327, 909 |
| BseDI | CCNNGG | 8 cut(s) | 5, 298, 585, 2786, 3124, 3491, 3588, 3669 |
| BseGI | GGATG | 7 cut(s) | 785, 1312, 1345, 1477, 1807, 1813, 2194 |
| BseJI | GATNNNNATC | 1 cut(s) | 77 |
| BseMI | GCAATG | 2 cut(s) | 551, 2749 |
| BseRI | GAGGAG | 3 cut(s) | 467, 799, 3200 |
| BseSI | GKGCMC | 3 cut(s) | 802, 2600, 3490 |
| BseYI | CCCAGC | 3 cut(s) | 1513, 1634, 1826 |
| BsgI | GTGCAG | 2 cut(s) | 1817, 2311 |
| Bsh1236I | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3334 |
| BshFI | GGCC | 3 cut(s) | 952, 1897, 2791 |
| BshVI | ATCGAT | 2 cut(s) | 327, 909 |
| BsiEI | CGRYCG | 1 cut(s) | 3334 |
| BsiHKAI | GWGCWC | 4 cut(s) | 802, 862, 2143, 3490 |
| BsiHKCI | CYCGRG | 2 cut(s) | 954, 3425 |
| BsiSI | CCGG | 5 cut(s) | 1430, 2263, 2512, 3022, 3588 |
| BslFI | GGGAC | 5 cut(s) | 34, 518, 1304, 2769, 3598 |
| BsmAI | GTCTC | 9 cut(s) | 426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350 |
| BsmFI | GGGAC | 5 cut(s) | 34, 518, 1304, 2769, 3598 |
| BsmI | GAATGC | 1 cut(s) | 3550 |
| BsnI | GGCC | 3 cut(s) | 952, 1897, 2791 |
| Bso31I | GGTCTC | 2 cut(s) | 426, 3350 |
| BsoBI | CYCGRG | 2 cut(s) | 954, 3425 |
| Bsp119I | TTCGAA | 1 cut(s) | 240 |
| Bsp1286I | GDGCHC | 6 cut(s) | 802, 862, 2143, 2600, 3407, 3490 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1566, 2979 |
| BspACI | CCGC | 8 cut(s) | 1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782 |
| BspANI | GGCC | 3 cut(s) | 952, 1897, 2791 |
| BspDI | ATCGAT | 2 cut(s) | 327, 909 |
| BspFNI | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| BspHI | TCATGA | 3 cut(s) | 2221, 2641, 3627 |
| BspLI | GGNNCC | 5 cut(s) | 1137, 2610, 3586, 3721, 3853 |
| BspMI | ACCTGC | 1 cut(s) | 3624 |
| BspOI | GCTAGC | 1 cut(s) | 488 |
| BspPI | GGATC | 9 cut(s) | 73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972 |
| BspQI | GCTCTTC | 3 cut(s) | 672, 1145, 2883 |
| BspT104I | TTCGAA | 1 cut(s) | 240 |
| BspTNI | GGTCTC | 2 cut(s) | 426, 3350 |
| BsrDI | GCAATG | 2 cut(s) | 551, 2749 |
| BssECI | CCNNGG | 8 cut(s) | 5, 298, 585, 2786, 3124, 3491, 3588, 3669 |
| BssNI | GRCGYC | 1 cut(s) | 1687 |
| BssT1I | CCWWGG | 2 cut(s) | 585, 3669 |
| Bst2UI | CCWGG | 7 cut(s) | 26, 89, 299, 2788, 3126, 3153, 3504 |
| Bst6I | CTCTTC | 5 cut(s) | 672, 933, 1145, 1419, 2883 |
| BstACI | GRCGYC | 1 cut(s) | 1687 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3569 |
| BstBAI | YACGTR | 2 cut(s) | 3008, 3083 |
| BstBI | TTCGAA | 1 cut(s) | 240 |
| BstDSI | CCRYGG | 1 cut(s) | 5 |
| BstF5I | GGATG | 7 cut(s) | 785, 1312, 1345, 1477, 1807, 1813, 2194 |
| BstFNI | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| BstHHI | GCGC | 4 cut(s) | 1157, 2405, 3638, 3782 |
| BstMAI | GTCTC | 9 cut(s) | 426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350 |
| BstMCI | CGRYCG | 1 cut(s) | 3334 |
| BstNI | CCWGG | 7 cut(s) | 26, 89, 299, 2788, 3126, 3153, 3504 |
| BstNSI | RCATGY | 6 cut(s) | 260, 1429, 2102, 2337, 2671, 3636 |
| BstSCI | CCNGG | 9 cut(s) | 24, 87, 297, 2261, 2786, 3124, 3151, 3502, 3587 |
| BstSFI | CTRYAG | 3 cut(s) | 933, 1026, 1479 |
| BstSLI | GKGCMC | 3 cut(s) | 802, 2600, 3490 |
| BstSNI | TACGTA | 1 cut(s) | 3008 |
| BstUI | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| BstV2I | GAAGAC | 2 cut(s) | 2294, 2408 |
| BstX2I | RGATCY | 3 cut(s) | 294, 1643, 3719 |
| BstYI | RGATCY | 3 cut(s) | 294, 1643, 3719 |
| Bsu15I | ATCGAT | 2 cut(s) | 327, 909 |
| BsuI | GTATCC | 3 cut(s) | 523, 1852, 3383 |
| BsuRI | GGCC | 3 cut(s) | 952, 1897, 2791 |
| BsuTUI | ATCGAT | 2 cut(s) | 327, 909 |
| BtgI | CCRYGG | 1 cut(s) | 5 |
| BtgZI | GCGATG | 2 cut(s) | 1064, 1622 |
| BtsCI | GGATG | 7 cut(s) | 785, 1312, 1345, 1477, 1807, 1813, 2194 |
| BtsI | GCAGTG | 2 cut(s) | 2299, 3522 |
| BveI | ACCTGC | 1 cut(s) | 3624 |
| CaiI | CAGNNNCTG | 6 cut(s) | 46, 298, 1013, 1034, 1520, 1562 |
| CciI | TCATGA | 3 cut(s) | 2221, 2641, 3627 |
| CfoI | GCGC | 4 cut(s) | 1157, 2405, 3638, 3782 |
| Cfr13I | GGNCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| ClaI | ATCGAT | 2 cut(s) | 327, 909 |
| CseI | GACGC | 4 cut(s) | 131, 836, 3218, 3978 |
| CsiI | ACCWGGT | 2 cut(s) | 24, 3502 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 191, 226, 3294, 3329 |
| DraI | TTTAAA | 3 cut(s) | 273, 342, 3979 |
| DraIII | CACNNNGTG | 1 cut(s) | 3506 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1686 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1686 |
| Eam1104I | CTCTTC | 5 cut(s) | 672, 933, 1145, 1419, 2883 |
| EarI | CTCTTC | 5 cut(s) | 672, 933, 1145, 1419, 2883 |
| EciI | GGCGGA | 1 cut(s) | 3368 |
| Ecl136II | GAGCTC | 1 cut(s) | 2141 |
| Eco105I | TACGTA | 1 cut(s) | 3008 |
| Eco130I | CCWWGG | 2 cut(s) | 585, 3669 |
| Eco24I | GRGCYC | 2 cut(s) | 2143, 3407 |
| Eco31I | GGTCTC | 2 cut(s) | 426, 3350 |
| Eco32I | GATATC | 1 cut(s) | 2962 |
| Eco47I | GGWCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| Eco53kI | GAGCTC | 1 cut(s) | 2141 |
| Eco57I | CTGAAG | 6 cut(s) | 164, 275, 1470, 2402, 3668, 3957 |
| Eco88I | CYCGRG | 2 cut(s) | 954, 3425 |
| EcoICRI | GAGCTC | 1 cut(s) | 2141 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1217, 2609 |
| EcoRI | GAATTC | 1 cut(s) | 364 |
| EcoRII | CCWGG | 7 cut(s) | 24, 87, 297, 2786, 3124, 3151, 3502 |
| EcoRV | GATATC | 1 cut(s) | 2962 |
| EcoT14I | CCWWGG | 2 cut(s) | 585, 3669 |
| EcoT22I | ATGCAT | 1 cut(s) | 356 |
| EcoT38I | GRGCYC | 2 cut(s) | 2143, 3407 |
| ErhI | CCWWGG | 2 cut(s) | 585, 3669 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 930, 962, 2265, 2297, 2751, 2783 |
| FaqI | GGGAC | 5 cut(s) | 34, 518, 1304, 2769, 3598 |
| FbaI | TGATCA | 1 cut(s) | 3367 |
| FblI | GTMKAC | 2 cut(s) | 1052, 1243 |
| FokI | GGATG | 7 cut(s) | 772, 1319, 1352, 1484, 1814, 1820, 2201 |
| FriOI | GRGCYC | 2 cut(s) | 2143, 3407 |
| GlaI | GCGC | 4 cut(s) | 1156, 2404, 3637, 3781 |
| GsaI | CCCAGC | 3 cut(s) | 1517, 1638, 1830 |
| GsuI | CTGGAG | 3 cut(s) | 216, 1758, 3174 |
| HaeIII | GGCC | 3 cut(s) | 952, 1897, 2791 |
| HapII | CCGG | 5 cut(s) | 1430, 2263, 2512, 3022, 3588 |
| HgaI | GACGC | 4 cut(s) | 131, 836, 3218, 3978 |
| HhaI | GCGC | 4 cut(s) | 1157, 2405, 3638, 3782 |
| Hin1I | GRCGYC | 1 cut(s) | 1687 |
| Hin6I | GCGC | 4 cut(s) | 1155, 2403, 3636, 3780 |
| HinP1I | GCGC | 4 cut(s) | 1155, 2403, 3636, 3780 |
| HincII | GTYRAC | 4 cut(s) | 228, 2325, 3169, 3208 |
| HindII | GTYRAC | 4 cut(s) | 228, 2325, 3169, 3208 |
| HindIII | AAGCTT | 5 cut(s) | 266, 411, 617, 2927, 3650 |
| HpaI | GTTAAC | 1 cut(s) | 228 |
| HpaII | CCGG | 5 cut(s) | 1430, 2263, 2512, 3022, 3588 |
| HphI | GGTGA | 6 cut(s) | 188, 2476, 2600, 2759, 3059, 3449 |
| Hpy99I | CGWCG | 3 cut(s) | 125, 902, 3972 |
| HpyCH4IV | ACGT | 6 cut(s) | 102, 897, 1687, 3007, 3082, 3823 |
| HpySE526I | ACGT | 6 cut(s) | 102, 897, 1687, 3007, 3082, 3823 |
| Hsp92I | GRCGYC | 1 cut(s) | 1687 |
| HspAI | GCGC | 4 cut(s) | 1155, 2403, 3636, 3780 |
| Ksp22I | TGATCA | 1 cut(s) | 3367 |
| KspAI | GTTAAC | 1 cut(s) | 228 |
| LguI | GCTCTTC | 3 cut(s) | 672, 1145, 2883 |
| LmnI | GCTCC | 2 cut(s) | 729, 2767 |
| LweI | GCATC | 8 cut(s) | 471, 1462, 1768, 1928, 2014, 2266, 2965, 3049 |
| MabI | ACCWGGT | 2 cut(s) | 24, 3502 |
| MaeII | ACGT | 6 cut(s) | 102, 897, 1687, 3007, 3082, 3823 |
| MaeIII | GTNAC | 7 cut(s) | 130, 318, 1496, 2013, 2315, 2747, 3478 |
| MfeI | CAATTG | 2 cut(s) | 2000, 3093 |
| MflI | RGATCY | 3 cut(s) | 294, 1643, 3719 |
| MhlI | GDGCHC | 6 cut(s) | 802, 862, 2143, 2600, 3407, 3490 |
| MlyI | GAGTC | 7 cut(s) | 180, 778, 1403, 1454, 2308, 2353, 2986 |
| MmeI | TCCRAC | 7 cut(s) | 137, 294, 1906, 2010, 2178, 3294, 3942 |
| Mph1103I | ATGCAT | 1 cut(s) | 356 |
| MroXI | GAANNNNTTC | 2 cut(s) | 942, 3550 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2730 |
| MspI | CCGG | 5 cut(s) | 1430, 2263, 2512, 3022, 3588 |
| MspR9I | CCNGG | 9 cut(s) | 26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589 |
| MunI | CAATTG | 2 cut(s) | 2000, 3093 |
| Mva1269I | GAATGC | 1 cut(s) | 3550 |
| MvaI | CCWGG | 7 cut(s) | 26, 89, 299, 2788, 3126, 3153, 3504 |
| MvnI | CGCG | 4 cut(s) | 1093, 2403, 2499, 3782 |
| NciI | CCSGG | 2 cut(s) | 2263, 3589 |
| NheI | GCTAGC | 1 cut(s) | 484 |
| NlaIV | GGNNCC | 5 cut(s) | 1137, 2610, 3586, 3721, 3853 |
| NmeAIII | GCCGAG | 1 cut(s) | 3472 |
| NmuCI | GTSAC | 3 cut(s) | 1496, 2013, 2747 |
| NsiI | ATGCAT | 1 cut(s) | 356 |
| NspI | RCATGY | 6 cut(s) | 260, 1429, 2102, 2337, 2671, 3636 |
| NspV | TTCGAA | 1 cut(s) | 240 |
| PaeI | GCATGC | 1 cut(s) | 1429 |
| PaeR7I | CTCGAG | 2 cut(s) | 954, 3425 |
| PagI | TCATGA | 3 cut(s) | 2221, 2641, 3627 |
| PciSI | GCTCTTC | 3 cut(s) | 672, 1145, 2883 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 108, 906, 961 |
| PctI | GAATGC | 1 cut(s) | 3550 |
| PdmI | GAANNNNTTC | 2 cut(s) | 942, 3550 |
| PflFI | GACNNNGTC | 1 cut(s) | 2753 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1520, 3506 |
| PfoI | TCCNGGA | 1 cut(s) | 87 |
| PleI | GAGTC | 7 cut(s) | 179, 777, 1403, 1454, 2307, 2353, 2986 |
| PpsI | GAGTC | 7 cut(s) | 179, 777, 1403, 1454, 2307, 2353, 2986 |
| Ppu21I | YACGTR | 2 cut(s) | 3008, 3083 |
| PpuMI | RGGWCCY | 2 cut(s) | 1217, 2609 |
| PshBI | ATTAAT | 1 cut(s) | 681 |
| PsiI | TTATAA | 2 cut(s) | 2079, 2925 |
| Psp124BI | GAGCTC | 1 cut(s) | 2143 |
| Psp5II | RGGWCCY | 2 cut(s) | 1217, 2609 |
| Psp6I | CCWGG | 7 cut(s) | 24, 87, 297, 2786, 3124, 3151, 3502 |
| PspFI | CCCAGC | 3 cut(s) | 1513, 1634, 1826 |
| PspGI | CCWGG | 7 cut(s) | 24, 87, 297, 2786, 3124, 3151, 3502 |
| PspN4I | GGNNCC | 5 cut(s) | 1137, 2610, 3586, 3721, 3853 |
| PspPI | GGNCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| PspPPI | RGGWCCY | 2 cut(s) | 1217, 2609 |
| PspXI | VCTCGAGB | 1 cut(s) | 954 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1009, 1041 |
| PstNI | CAGNNNCTG | 6 cut(s) | 46, 298, 1013, 1034, 1520, 1562 |
| PsuI | RGATCY | 3 cut(s) | 294, 1643, 3719 |
| PsyI | GACNNNGTC | 1 cut(s) | 2753 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2730 |
| SacI | GAGCTC | 1 cut(s) | 2143 |
| SapI | GCTCTTC | 3 cut(s) | 672, 1145, 2883 |
| Sau96I | GGNCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| ScaI | AGTACT | 1 cut(s) | 283 |
| SchI | GAGTC | 7 cut(s) | 180, 778, 1403, 1454, 2308, 2353, 2986 |
| ScrFI | CCNGG | 9 cut(s) | 26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589 |
| SduI | GDGCHC | 6 cut(s) | 802, 862, 2143, 2600, 3407, 3490 |
| SexAI | ACCWGGT | 2 cut(s) | 24, 3502 |
| SfaNI | GCATC | 8 cut(s) | 471, 1462, 1768, 1928, 2014, 2266, 2965, 3049 |
| SfcI | CTRYAG | 3 cut(s) | 933, 1026, 1479 |
| Sfr274I | CTCGAG | 2 cut(s) | 954, 3425 |
| SfuI | TTCGAA | 1 cut(s) | 240 |
| SinI | GGWCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| SlaI | CTCGAG | 2 cut(s) | 954, 3425 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2730 |
| SmlI | CTYRAG | 4 cut(s) | 954, 2194, 2618, 3425 |
| SmoI | CTYRAG | 4 cut(s) | 954, 2194, 2618, 3425 |
| SnaBI | TACGTA | 1 cut(s) | 3008 |
| SphI | GCATGC | 1 cut(s) | 1429 |
| SsiI | CCGC | 8 cut(s) | 1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782 |
| SspI | AATATT | 3 cut(s) | 2582, 3297, 3868 |
| SstI | GAGCTC | 1 cut(s) | 2143 |
| StyD4I | CCNGG | 9 cut(s) | 24, 87, 297, 2261, 2786, 3124, 3151, 3502, 3587 |
| StyI | CCWWGG | 2 cut(s) | 585, 3669 |
| TaiI | ACGT | 6 cut(s) | 105, 900, 1690, 3010, 3085, 3826 |
| TatI | WGTACW | 7 cut(s) | 281, 456, 958, 1438, 2101, 2198, 3189 |
| TauI | GCSGC | 3 cut(s) | 1628, 2893, 3575 |
| TseFI | GTSAC | 3 cut(s) | 1496, 2013, 2747 |
| Tsp45I | GTSAC | 3 cut(s) | 1496, 2013, 2747 |
| TspGWI | ACGGA | 1 cut(s) | 3830 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2753 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1520, 3506 |
| VneI | GTGCAC | 2 cut(s) | 798, 3486 |
| VpaK11BI | GGWCC | 4 cut(s) | 9, 1217, 2609, 3585 |
| VspI | ATTAAT | 1 cut(s) | 681 |
| XapI | RAATTY | 7 cut(s) | 36, 150, 364, 2182, 2228, 2268, 2680 |
| XceI | RCATGY | 6 cut(s) | 260, 1429, 2102, 2337, 2671, 3636 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 240, 2765, 3479, 3760 |
| XhoI | CTCGAG | 2 cut(s) | 954, 3425 |
| XmiI | GTMKAC | 2 cut(s) | 1052, 1243 |
| XmnI | GAANNNNTTC | 2 cut(s) | 942, 3550 |
| ZraI | GACGTC | 1 cut(s) | 1688 |
| ZrmI | AGTACT | 1 cut(s) | 283 |
| Zsp2I | ATGCAT | 1 cut(s) | 356 |