E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38600 AT4G38600 AT4G38600 |
| fragaria_vesca | FvH4_2g01290 |
| malus_domestica | MD00G1173700.v1.1 MD00G1173800.v1.1 MD00G1173900.v1.1 MD05G1120900.v1.1 MD10G1095300.v1.1 |
| prunus_persica | Prupe.8G164700_v2.0.a1 |
| pyrus_communis | pycom05g11490 pycom05g11500 pycom10g10610 pycom10g10620 |
| rosa_chinensis | RchiOBHm_Chr6g0251951 RchiOBHm_Chr6g0252001 |
| rosa_laevigata | RLG00000015410 RLG00000015417 |
| rosa_multiflora | Rmu_sc0002522.1_g000052 Rmu_sc0002522.1_g000062 Rmu_ssc0000303.1_g000016 |
| rosa_roxburghii | Rroxscaffold_7G00216270 |
| rosa_rugosa | Rorug05G0505300.1 |
| rosa_samantha | Rh6AG016800 Rh6AG017300 Rh6AG017400 Rh6AG018000 Rh6AG018100 Rh6AG018900 Rh6AG019000 Rh6CG011400 Rh6DG012700 |
| rosa_wichuraiana | Rw6G000110 Rw6G000120 Rw6G000150 Rw6G001600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4872 |
| AarI | CACCTGC | 1 cut(s) | 613 |
| AatII | GACGTC | 1 cut(s) | 2071 |
| Acc16I | TGCGCA | 1 cut(s) | 1318 |
| Acc36I | ACCTGC | 3 cut(s) | 528, 613, 1322 |
| AccB1I | GGYRCC | 1 cut(s) | 503 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1006 |
| AccBSI | CCGCTC | 3 cut(s) | 567, 2698, 5204 |
| AccI | GTMKAC | 4 cut(s) | 940, 1438, 2462, 2999 |
| AccII | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| AccIII | TCCGGA | 1 cut(s) | 5080 |
| AcoI | YGGCCR | 5 cut(s) | 210, 247, 882, 4885, 5278 |
| AcyI | GRCGYC | 2 cut(s) | 2068, 3637 |
| AfeI | AGCGCT | 2 cut(s) | 92, 1609 |
| AflIII | ACRYGT | 2 cut(s) | 2204, 5088 |
| AhlI | ACTAGT | 1 cut(s) | 1210 |
| AjnI | CCWGG | 7 cut(s) | 372, 1651, 2245, 3339, 4733, 5071, 5449 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 420, 452 |
| Alw21I | GWGCWC | 8 cut(s) | 300, 775, 955, 2749, 2809, 3104, 3110, 5437 |
| Alw44I | GTGCAC | 2 cut(s) | 2745, 5433 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 895, 2246, 2981, 3515 |
| Ama87I | CYCGRG | 2 cut(s) | 156, 165 |
| Aor13HI | TCCGGA | 1 cut(s) | 5080 |
| Aor51HI | AGCGCT | 2 cut(s) | 92, 1609 |
| ApaLI | GTGCAC | 2 cut(s) | 2745, 5433 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2889, 2917, 5497 |
| AspA2I | CCTAGG | 1 cut(s) | 5438 |
| AspLEI | GCGC | 6 cut(s) | 93, 246, 812, 1319, 1610, 5585 |
| AspS9I | GGNCC | 6 cut(s) | 159, 168, 1547, 1724, 3164, 4556 |
| AsuC2I | CCSGG | 2 cut(s) | 2040, 5100 |
| AvaI | CYCGRG | 2 cut(s) | 156, 165 |
| AvaII | GGWCC | 2 cut(s) | 1547, 4556 |
| AvrII | CCTAGG | 1 cut(s) | 5438 |
| AxyI | CCTNAGG | 1 cut(s) | 1614 |
| BaeGI | GKGCMC | 5 cut(s) | 478, 2749, 4354, 4547, 5437 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3417, 3450, 4129, 4162 |
| BalI | TGGCCA | 1 cut(s) | 4887 |
| BamHI | GGATCC | 1 cut(s) | 5666 |
| BanI | GGYRCC | 1 cut(s) | 503 |
| BanII | GRGCYC | 3 cut(s) | 545, 3110, 5354 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1751, 1783 |
| BauI | CACGAG | 4 cut(s) | 299, 1626, 3103, 4347 |
| BbsI | GAAGAC | 5 cut(s) | 1649, 4241, 4318, 4355, 4943 |
| Bbv12I | GWGCWC | 8 cut(s) | 300, 775, 955, 2749, 2809, 3104, 3110, 5437 |
| BbvCI | CCTCAGC | 2 cut(s) | 3420, 4113 |
| BceAI | ACGGC | 4 cut(s) | 182, 406, 1504, 5265 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3686, 3720, 4994, 5028 |
| BciT130I | CCWGG | 7 cut(s) | 374, 1653, 2247, 3341, 4735, 5073, 5451 |
| BciVI | GTATCC | 2 cut(s) | 3418, 5330 |
| BclI | TGATCA | 3 cut(s) | 4669, 5314, 5329 |
| BcnI | CCSGG | 2 cut(s) | 2040, 5100 |
| BcuI | ACTAGT | 1 cut(s) | 1210 |
| BfmI | CTRYAG | 6 cut(s) | 1416, 1779, 2973, 3432, 3495, 3573 |
| BfoI | RGCGCY | 2 cut(s) | 94, 1611 |
| BfuAI | ACCTGC | 3 cut(s) | 528, 613, 1322 |
| BfuI | GTATCC | 2 cut(s) | 3418, 5330 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 167 |
| BlnI | CCTAGG | 1 cut(s) | 5438 |
| BlpI | GCTNAGC | 1 cut(s) | 2872 |
| BmcAI | AGTACT | 3 cut(s) | 685, 2231, 4050 |
| Bme1390I | CCNGG | 9 cut(s) | 374, 1653, 2040, 2247, 3341, 4735, 5073, 5100, 5451 |
| Bme18I | GGWCC | 2 cut(s) | 1547, 4556 |
| BmeT110I | CYCGRG | 2 cut(s) | 156, 165 |
| BmgT120I | GGNCC | 6 cut(s) | 159, 168, 1547, 1724, 3164, 4556 |
| BmiI | GGNNCC | 9 cut(s) | 14, 371, 505, 1507, 1869, 2702, 3084, 4557, 5668 |
| BmrFI | CCNGG | 9 cut(s) | 374, 1653, 2040, 2247, 3341, 4735, 5073, 5100, 5451 |
| BmrI | ACTGGG | 2 cut(s) | 4557, 5544 |
| BmuI | ACTGGG | 2 cut(s) | 4557, 5544 |
| BpiI | GAAGAC | 5 cut(s) | 1649, 4241, 4318, 4355, 4943 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 20, 52, 3649, 3681 |
| BpmI | CTGGAG | 3 cut(s) | 1272, 2164, 4073 |
| Bpu10I | CCTNAGC | 3 cut(s) | 3420, 4113, 5397 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2872 |
| BpuEI | CTTGAG | 4 cut(s) | 2567, 4162, 4586, 5393 |
| BpuMI | CCSGG | 2 cut(s) | 2040, 5100 |
| Bsa29I | ATCGAT | 1 cut(s) | 3285 |
| BsaAI | YACGTR | 1 cut(s) | 5089 |
| BsaBI | GATNNNNATC | 1 cut(s) | 5559 |
| BsaHI | GRCGYC | 2 cut(s) | 2068, 3637 |
| BsaI | GGTCTC | 2 cut(s) | 2373, 3618 |
| BsaWI | WCCGGW | 3 cut(s) | 4458, 4794, 5080 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1408, 1438, 5075, 5105 |
| Bse118I | RCCGGY | 2 cut(s) | 1832, 2315 |
| Bse21I | CCTNAGG | 1 cut(s) | 1614 |
| Bse3DI | GCAATG | 3 cut(s) | 3564, 3585, 4696 |
| Bse8I | GATNNNNATC | 1 cut(s) | 5559 |
| BseAI | TCCGGA | 1 cut(s) | 5080 |
| BseBI | CCWGG | 7 cut(s) | 374, 1653, 2247, 3341, 4735, 5073, 5451 |
| BseCI | ATCGAT | 1 cut(s) | 3285 |
| BseJI | GATNNNNATC | 1 cut(s) | 5559 |
| BseMI | GCAATG | 3 cut(s) | 3564, 3585, 4696 |
| BseRI | GAGGAG | 5 cut(s) | 94, 97, 2746, 3770, 4701 |
| BseSI | GKGCMC | 5 cut(s) | 478, 2749, 4354, 4547, 5437 |
| BseX3I | CGGCCG | 1 cut(s) | 247 |
| BseYI | CCCAGC | 2 cut(s) | 2778, 3584 |
| BsgI | GTGCAG | 1 cut(s) | 4258 |
| Bsh1236I | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| Bsh1285I | CGRYCG | 2 cut(s) | 250, 4332 |
| BshNI | GGYRCC | 1 cut(s) | 503 |
| BshVI | ATCGAT | 1 cut(s) | 3285 |
| BsiEI | CGRYCG | 2 cut(s) | 250, 4332 |
| BsiHKAI | GWGCWC | 8 cut(s) | 300, 775, 955, 2749, 2809, 3104, 3110, 5437 |
| BsiHKCI | CYCGRG | 2 cut(s) | 156, 165 |
| BslFI | GGGAC | 4 cut(s) | 1064, 3251, 4716, 5545 |
| BsmBI | CGTCTC | 2 cut(s) | 104, 5291 |
| BsmFI | GGGAC | 4 cut(s) | 1064, 3251, 4716, 5545 |
| BsmI | GAATGC | 4 cut(s) | 1371, 2317, 4750, 5497 |
| Bso31I | GGTCTC | 2 cut(s) | 2373, 3618 |
| BsoBI | CYCGRG | 2 cut(s) | 156, 165 |
| Bsp13I | TCCGGA | 1 cut(s) | 5080 |
| Bsp1407I | TGTACA | 1 cut(s) | 5628 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2872 |
| Bsp19I | CCATGG | 2 cut(s) | 213, 1204 |
| Bsp68I | TCGCGA | 1 cut(s) | 5004 |
| BspDI | ATCGAT | 1 cut(s) | 3285 |
| BspEI | TCCGGA | 1 cut(s) | 5080 |
| BspFNI | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| BspHI | TCATGA | 4 cut(s) | 733, 1108, 4588, 5681 |
| BspLI | GGNNCC | 9 cut(s) | 14, 371, 505, 1507, 1869, 2702, 3084, 4557, 5668 |
| BspMAI | CTGCAG | 3 cut(s) | 1783, 3499, 3577 |
| BspMI | ACCTGC | 3 cut(s) | 528, 613, 1322 |
| BspQI | GCTCTTC | 5 cut(s) | 2619, 3092, 3187, 4830, 5342 |
| BspT107I | GGYRCC | 1 cut(s) | 503 |
| BspTNI | GGTCTC | 2 cut(s) | 2373, 3618 |
| BsrBI | CCGCTC | 3 cut(s) | 567, 2698, 5204 |
| BsrDI | GCAATG | 3 cut(s) | 3564, 3585, 4696 |
| BsrFI | RCCGGY | 2 cut(s) | 1832, 2315 |
| BsrGI | TGTACA | 1 cut(s) | 5628 |
| BssAI | RCCGGY | 2 cut(s) | 1832, 2315 |
| BssNI | GRCGYC | 2 cut(s) | 2068, 3637 |
| BssSI | CACGAG | 4 cut(s) | 299, 1626, 3103, 4347 |
| BssT1I | CCWWGG | 6 cut(s) | 213, 1116, 1204, 1923, 5438, 5616 |
| Bst2BI | CACGAG | 4 cut(s) | 299, 1626, 3103, 4347 |
| Bst2UI | CCWGG | 7 cut(s) | 374, 1653, 2247, 3341, 4735, 5073, 5451 |
| BstACI | GRCGYC | 2 cut(s) | 2068, 3637 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 5516 |
| BstAUI | TGTACA | 1 cut(s) | 5628 |
| BstBAI | YACGTR | 1 cut(s) | 5089 |
| BstDSI | CCRYGG | 4 cut(s) | 213, 1204, 3604, 5029 |
| BstEII | GGTNACC | 2 cut(s) | 2131, 4763 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3841 |
| BstFNI | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| BstH2I | RGCGCY | 2 cut(s) | 94, 1611 |
| BstHHI | GCGC | 6 cut(s) | 93, 246, 812, 1319, 1610, 5585 |
| BstMCI | CGRYCG | 2 cut(s) | 250, 4332 |
| BstNI | CCWGG | 7 cut(s) | 374, 1653, 2247, 3341, 4735, 5073, 5451 |
| BstNSI | RCATGY | 5 cut(s) | 1133, 1862, 2208, 4284, 5583 |
| BstPI | GGTNACC | 2 cut(s) | 2131, 4763 |
| BstSCI | CCNGG | 9 cut(s) | 372, 1651, 2038, 2245, 3339, 4733, 5071, 5098, 5449 |
| BstSFI | CTRYAG | 6 cut(s) | 1416, 1779, 2973, 3432, 3495, 3573 |
| BstSLI | GKGCMC | 5 cut(s) | 478, 2749, 4354, 4547, 5437 |
| BstUI | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| BstV2I | GAAGAC | 5 cut(s) | 1649, 4241, 4318, 4355, 4943 |
| BstX2I | RGATCY | 5 cut(s) | 1678, 1852, 2163, 3476, 5666 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1123 |
| BstYI | RGATCY | 5 cut(s) | 1678, 1852, 2163, 3476, 5666 |
| BstZI | CGGCCG | 1 cut(s) | 247 |
| Bsu15I | ATCGAT | 1 cut(s) | 3285 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1614 |
| BsuI | GTATCC | 2 cut(s) | 3418, 5330 |
| BsuTUI | ATCGAT | 1 cut(s) | 3285 |
| BtgI | CCRYGG | 4 cut(s) | 213, 1204, 3604, 5029 |
| BtgZI | GCGATG | 3 cut(s) | 551, 3081, 5019 |
| BtsI | GCAGTG | 6 cut(s) | 893, 969, 3787, 4246, 5340, 5469 |
| BtuMI | TCGCGA | 1 cut(s) | 5004 |
| BveI | ACCTGC | 3 cut(s) | 528, 613, 1322 |
| CaiI | CAGNNNCTG | 4 cut(s) | 895, 2246, 2981, 3515 |
| CciI | TCATGA | 4 cut(s) | 733, 1108, 4588, 5681 |
| CciNI | GCGGCCGC | 1 cut(s) | 247 |
| CfoI | GCGC | 6 cut(s) | 93, 246, 812, 1319, 1610, 5585 |
| Cfr10I | RCCGGY | 2 cut(s) | 1832, 2315 |
| Cfr13I | GGNCC | 6 cut(s) | 159, 168, 1547, 1724, 3164, 4556 |
| Cfr42I | CCGCGG | 1 cut(s) | 3607 |
| ClaI | ATCGAT | 1 cut(s) | 3285 |
| CseI | GACGC | 3 cut(s) | 646, 2783, 3645 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2139, 2174, 5241, 5276 |
| DraI | TTTAAA | 1 cut(s) | 2289 |
| EaeI | YGGCCR | 5 cut(s) | 210, 247, 882, 4885, 5278 |
| EagI | CGGCCG | 1 cut(s) | 247 |
| EciI | GGCGGA | 2 cut(s) | 41, 408 |
| Ecl136II | GAGCTC | 1 cut(s) | 3108 |
| EclXI | CGGCCG | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 6 cut(s) | 213, 1116, 1204, 1923, 5438, 5616 |
| Eco24I | GRGCYC | 3 cut(s) | 545, 3110, 5354 |
| Eco31I | GGTCTC | 2 cut(s) | 2373, 3618 |
| Eco32I | GATATC | 2 cut(s) | 3316, 5119 |
| Eco47I | GGWCC | 2 cut(s) | 1547, 4556 |
| Eco47III | AGCGCT | 2 cut(s) | 92, 1609 |
| Eco52I | CGGCCG | 1 cut(s) | 247 |
| Eco53kI | GAGCTC | 1 cut(s) | 3108 |
| Eco81I | CCTNAGG | 1 cut(s) | 1614 |
| Eco88I | CYCGRG | 2 cut(s) | 156, 165 |
| Eco91I | GGTNACC | 2 cut(s) | 2131, 4763 |
| EcoICRI | GAGCTC | 1 cut(s) | 3108 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3841 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1547, 3164, 4556 |
| EcoO65I | GGTNACC | 2 cut(s) | 2131, 4763 |
| EcoRI | GAATTC | 3 cut(s) | 262, 1987, 2904 |
| EcoRII | CCWGG | 7 cut(s) | 372, 1651, 2245, 3339, 4733, 5071, 5449 |
| EcoRV | GATATC | 2 cut(s) | 3316, 5119 |
| EcoT14I | CCWWGG | 6 cut(s) | 213, 1116, 1204, 1923, 5438, 5616 |
| EcoT22I | ATGCAT | 1 cut(s) | 3295 |
| EcoT38I | GRGCYC | 3 cut(s) | 545, 3110, 5354 |
| ErhI | CCWWGG | 6 cut(s) | 213, 1116, 1204, 1923, 5438, 5616 |
| Esp3I | CGTCTC | 2 cut(s) | 104, 5291 |
| FaqI | GGGAC | 4 cut(s) | 1064, 3251, 4716, 5545 |
| FauI | CCCGC | 4 cut(s) | 15, 2245, 4217, 5197 |
| FbaI | TGATCA | 3 cut(s) | 4669, 5314, 5329 |
| FblI | GTMKAC | 4 cut(s) | 940, 1438, 2462, 2999 |
| FriOI | GRGCYC | 3 cut(s) | 545, 3110, 5354 |
| FspI | TGCGCA | 1 cut(s) | 1318 |
| GlaI | GCGC | 6 cut(s) | 92, 245, 811, 1318, 1609, 5584 |
| GsaI | CCCAGC | 2 cut(s) | 2782, 3588 |
| GsuI | CTGGAG | 3 cut(s) | 1272, 2164, 4073 |
| HaeII | RGCGCY | 2 cut(s) | 94, 1611 |
| HgaI | GACGC | 3 cut(s) | 646, 2783, 3645 |
| HhaI | GCGC | 6 cut(s) | 93, 246, 812, 1319, 1610, 5585 |
| Hin1I | GRCGYC | 2 cut(s) | 2068, 3637 |
| Hin6I | GCGC | 6 cut(s) | 91, 244, 810, 1317, 1608, 5583 |
| HinP1I | GCGC | 6 cut(s) | 91, 244, 810, 1317, 1608, 5583 |
| HincII | GTYRAC | 8 cut(s) | 130, 861, 1960, 2176, 2573, 3675, 4272, 4696 |
| HindII | GTYRAC | 8 cut(s) | 130, 861, 1960, 2176, 2573, 3675, 4272, 4696 |
| HindIII | AAGCTT | 5 cut(s) | 1904, 2358, 2564, 2869, 5597 |
| HpaI | GTTAAC | 1 cut(s) | 130 |
| Hpy99I | CGWCG | 5 cut(s) | 413, 2073, 3030, 3338, 3904 |
| HpyCH4IV | ACGT | 4 cut(s) | 2050, 2068, 4432, 5088 |
| HpySE526I | ACGT | 4 cut(s) | 2050, 2068, 4432, 5088 |
| Hsp92I | GRCGYC | 2 cut(s) | 2068, 3637 |
| HspAI | GCGC | 6 cut(s) | 91, 244, 810, 1317, 1608, 5583 |
| Kpn2I | TCCGGA | 1 cut(s) | 5080 |
| Ksp22I | TGATCA | 3 cut(s) | 4669, 5314, 5329 |
| KspAI | GTTAAC | 1 cut(s) | 130 |
| KspI | CCGCGG | 1 cut(s) | 3607 |
| LguI | GCTCTTC | 5 cut(s) | 2619, 3092, 3187, 4830, 5342 |
| LmnI | GCTCC | 7 cut(s) | 12, 295, 1126, 1337, 1615, 2978, 4714 |
| MaeII | ACGT | 4 cut(s) | 2050, 2068, 4432, 5088 |
| MbiI | CCGCTC | 3 cut(s) | 567, 2698, 5204 |
| MfeI | CAATTG | 3 cut(s) | 3947, 5010, 5040 |
| MflI | RGATCY | 5 cut(s) | 1678, 1852, 2163, 3476, 5666 |
| MlsI | TGGCCA | 1 cut(s) | 4887 |
| MluNI | TGGCCA | 1 cut(s) | 4887 |
| MmeI | TCCRAC | 5 cut(s) | 330, 1434, 3729, 3856, 4399 |
| Mox20I | TGGCCA | 1 cut(s) | 4887 |
| Mph1103I | ATGCAT | 1 cut(s) | 3295 |
| MroI | TCCGGA | 1 cut(s) | 5080 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2889, 2917, 5497 |
| MscI | TGGCCA | 1 cut(s) | 4887 |
| MslI | CAYNNNNRTG | 3 cut(s) | 786, 828, 1514 |
| Msp20I | TGGCCA | 1 cut(s) | 4887 |
| MspA1I | CMGCKG | 5 cut(s) | 643, 1058, 3606, 3700, 4475 |
| MspR9I | CCNGG | 9 cut(s) | 374, 1653, 2040, 2247, 3341, 4735, 5073, 5100, 5451 |
| MunI | CAATTG | 3 cut(s) | 3947, 5010, 5040 |
| Mva1269I | GAATGC | 4 cut(s) | 1371, 2317, 4750, 5497 |
| MvaI | CCWGG | 7 cut(s) | 374, 1653, 2247, 3341, 4735, 5073, 5451 |
| MvnI | CGCG | 4 cut(s) | 244, 246, 3606, 5004 |
| NciI | CCSGG | 2 cut(s) | 2040, 5100 |
| NcoI | CCATGG | 2 cut(s) | 213, 1204 |
| NlaIV | GGNNCC | 9 cut(s) | 14, 371, 505, 1507, 1869, 2702, 3084, 4557, 5668 |
| NmeAIII | GCCGAG | 3 cut(s) | 1912, 2449, 4951 |
| NmuCI | GTSAC | 7 cut(s) | 404, 891, 2266, 2522, 3449, 3960, 4994 |
| NotI | GCGGCCGC | 1 cut(s) | 247 |
| NruI | TCGCGA | 1 cut(s) | 5004 |
| NsbI | TGCGCA | 1 cut(s) | 1318 |
| NsiI | ATGCAT | 1 cut(s) | 3295 |
| NspI | RCATGY | 5 cut(s) | 1133, 1862, 2208, 4284, 5583 |
| PaeI | GCATGC | 2 cut(s) | 1133, 4284 |
| PagI | TCATGA | 4 cut(s) | 733, 1108, 4588, 5681 |
| PaqCI | CACCTGC | 1 cut(s) | 613 |
| PasI | CCCWGGG | 1 cut(s) | 2246 |
| PciI | ACATGT | 1 cut(s) | 2204 |
| PciSI | GCTCTTC | 5 cut(s) | 2619, 3092, 3187, 4830, 5342 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 76, 2056, 2908, 3330, 3899 |
| PctI | GAATGC | 4 cut(s) | 1371, 2317, 4750, 5497 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2889, 2917, 5497 |
| PflFI | GACNNNGTC | 1 cut(s) | 4700 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1006 |
| Ppu21I | YACGTR | 1 cut(s) | 5089 |
| PpuMI | RGGWCCY | 2 cut(s) | 1547, 4556 |
| PscI | ACATGT | 1 cut(s) | 2204 |
| PsiI | TTATAA | 1 cut(s) | 4872 |
| Psp124BI | GAGCTC | 1 cut(s) | 3110 |
| Psp5II | RGGWCCY | 2 cut(s) | 1547, 4556 |
| Psp6I | CCWGG | 7 cut(s) | 372, 1651, 2245, 3339, 4733, 5071, 5449 |
| PspEI | GGTNACC | 2 cut(s) | 2131, 4763 |
| PspFI | CCCAGC | 2 cut(s) | 2778, 3584 |
| PspGI | CCWGG | 7 cut(s) | 372, 1651, 2245, 3339, 4733, 5071, 5449 |
| PspN4I | GGNNCC | 9 cut(s) | 14, 371, 505, 1507, 1869, 2702, 3084, 4557, 5668 |
| PspPI | GGNCC | 6 cut(s) | 159, 168, 1547, 1724, 3164, 4556 |
| PspPPI | RGGWCCY | 2 cut(s) | 1547, 4556 |
| PstI | CTGCAG | 3 cut(s) | 1783, 3499, 3577 |
| PstNI | CAGNNNCTG | 4 cut(s) | 895, 2246, 2981, 3515 |
| PsuI | RGATCY | 5 cut(s) | 1678, 1852, 2163, 3476, 5666 |
| PsyI | GACNNNGTC | 1 cut(s) | 4700 |
| PvuII | CAGCTG | 3 cut(s) | 643, 1058, 3700 |
| RruI | TCGCGA | 1 cut(s) | 5004 |
| RseI | CAYNNNNRTG | 3 cut(s) | 786, 828, 1514 |
| SacI | GAGCTC | 1 cut(s) | 3110 |
| SacII | CCGCGG | 1 cut(s) | 3607 |
| SapI | GCTCTTC | 5 cut(s) | 2619, 3092, 3187, 4830, 5342 |
| Sau96I | GGNCC | 6 cut(s) | 159, 168, 1547, 1724, 3164, 4556 |
| ScaI | AGTACT | 3 cut(s) | 685, 2231, 4050 |
| ScrFI | CCNGG | 9 cut(s) | 374, 1653, 2040, 2247, 3341, 4735, 5073, 5100, 5451 |
| SfcI | CTRYAG | 6 cut(s) | 1416, 1779, 2973, 3432, 3495, 3573 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 167 |
| Sfr303I | CCGCGG | 1 cut(s) | 3607 |
| SgrBI | CCGCGG | 1 cut(s) | 3607 |
| SinI | GGWCC | 2 cut(s) | 1547, 4556 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 786, 828, 1514 |
| SmlI | CTYRAG | 4 cut(s) | 2582, 4141, 4565, 5372 |
| SmoI | CTYRAG | 4 cut(s) | 2582, 4141, 4565, 5372 |
| SpeI | ACTAGT | 1 cut(s) | 1210 |
| SphI | GCATGC | 2 cut(s) | 1133, 4284 |
| SspI | AATATT | 3 cut(s) | 1816, 4529, 5244 |
| SstI | GAGCTC | 1 cut(s) | 3110 |
| StyD4I | CCNGG | 9 cut(s) | 372, 1651, 2038, 2245, 3339, 4733, 5071, 5098, 5449 |
| StyI | CCWWGG | 6 cut(s) | 213, 1116, 1204, 1923, 5438, 5616 |
| TaiI | ACGT | 4 cut(s) | 2053, 2071, 4435, 5091 |
| TaqII | GACCGA | 2 cut(s) | 1738, 3642 |
| TauI | GCSGC | 9 cut(s) | 191, 194, 197, 249, 252, 255, 815, 3606, 5185 |
| TseFI | GTSAC | 7 cut(s) | 404, 891, 2266, 2522, 3449, 3960, 4994 |
| Tsp45I | GTSAC | 7 cut(s) | 404, 891, 2266, 2522, 3449, 3960, 4994 |
| TspGWI | ACGGA | 5 cut(s) | 377, 3888, 4433, 5018, 5315 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4700 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1006 |
| VneI | GTGCAC | 2 cut(s) | 2745, 5433 |
| VpaK11BI | GGWCC | 2 cut(s) | 1547, 4556 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3841 |
| XbaI | TCTAGA | 1 cut(s) | 4981 |
| XceI | RCATGY | 5 cut(s) | 1133, 1862, 2208, 4284, 5583 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 871, 4712, 5426 |
| XmaJI | CCTAGG | 1 cut(s) | 5438 |
| XmiI | GTMKAC | 4 cut(s) | 940, 1438, 2462, 2999 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2889, 2917, 5497 |
| ZraI | GACGTC | 1 cut(s) | 2069 |
| ZrmI | AGTACT | 3 cut(s) | 685, 2231, 4050 |
| Zsp2I | ATGCAT | 1 cut(s) | 3295 |