Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003360

Physical Location & Seq

Genomic Coordinates Forward (+)

14029478 .. 14035557

Gene Structure 6080 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3987 bp

ATGCCGTGGACCAACTCATCTTACCTGGTACTCCAAATTCAGTTCCTGTCCCAGTATCTTCTGCTGAAAAGGATAGTGATCCTGTTCCTGGAACATCATCACGTTCTAGGCGTTATAGACGACGCAACAGTAACTCAAATCCAGATGGAAATTTGTTGGAAGAAACTAAGAGTCCTCCTTCAGCAAATATCGGTTCACCTCCAAGTTCAGTGGAGATTCCTACTGTTAACTCCAGCCTTCGAATGGCTGTCAGTGCATGTGCTAAAGCTTTTAAAGACAAGTACTTCCCTTCAGATCCTGGGGCTGTTGAAGTTGGAGTTACAGATCGATCTATTACATTTAAAGAATCTATGCATGAAGTTGAATTCAGGTGTTGATGACCAAAAAACGAAAGCAAAGGGAAAGTCGAAAGCTTTTGGGTCTCGCTTGGTTGATAGTTCTGCAAGTAAGGAGGAGTACATGATTGGTGTGGTATCTGAGATGCTAGCCGAACTAAGCAAAGGGGACGGTGTATCCACTTTTGAGTTCATTGGTAGTGGTGTTGTGGCAGCATTGCTCAACTATTTTTCTTATGGGTACTTCTCCAAGGAGAGGATTTCGGAAGCTAATTTGCCCAAGCTTCGTGAGCAAGCACTTAGAAGATTTAAGTCATTTGTTGCTGTTGCTCTTCCTTTCAGTATTAATGAAGGAAGTGTAGCACCAATGACTGTCCTCGTTCAGAAGCTCCAAAATGCTTTGTCGTCCTTAGAGCGTTTTCCAGTCGTGCTGAGTCATTCATCTAGGTCATCCACTGGGAGTGCACGCCTCTCCTCTGGACTGAGTGCATTATCTCAGCCCTTTAAGTTGCGTCTTTGTCGAGCACAAGGAGAAAAGACCCTCCGAGACTATTCATCGAACGTCGTTCTGATCGATCCATTAGCTAGTTTAGCTGCTGTAGAAGAGTTTCTTTGGCCTCGAGTACAGCGAGGGGAATCTGGTCAGAAGCCTGCTGTCTCTGCTGGAAACTCAGAATCTGGAACTACACCTACAGGTGCTGGTGCTTCATCTCTGTCTACCTCAAATCCTGCTACCACCACTCATCGCCATTCAACGCGATCCAGAACATCTGTGAATATAGGAGATACAGCTAGGAGGGAACCATCACAAGAGAAGAGCGCAAGCTCATCAAAAGGGAAGGGTAAAGCTGTTTTGAAGCCTTCTCAGGAGGAAGCAAGAGGACCTCAAACGAGAAATGCAGCTCGTAGACGAGCAGCTCTTGATAAAGATGTTCAAATGAAGCCCACAAATGGGGACACTACTTCTGAGGATGAGGAATTGGATATATCGCCTGTTGAGATGGATGAATTGGTTATTGAAGATGATGACATCTCAGATGACGAAGATGATGACCATGATGTTCTAAGAGATGACTCTCTTCCTGTTTGCATGCCGGATAAAGTACACGATGTCAAATTGGGAGACTCAACTGAGGATGCTACTGTAGCTTCAGCCACAAGTGACAATCAGACTAACCCAGCTTCTGGCTCTAGTAGCAGAGTTGCTACGGGTAGAGGCTCAGATTCTGCTGAGCATAGGAGTAGTAATTCTGCTTATGGTTCAAAAGGTGCGATGTCATTTGCTGCTGCCGCTATGGCTGGGCTTGGATCTGCCAGCAGGGGCATTAGGGGAGGCAGAGATAGACAAGGACGTCCTATTTTTGGCAGTTCTAGTGATCCTCCTAAGTTGATTTTTACTTCTGGAGGGAAGCAGCTTAATAGGCATCTGACTAGCTATCAGGCTATTCAGAGACAGCTTGTGCAGGATGAGGATGATGATGAAAGGTATGCTGGGAGTGATTTTGTATCCAGTGAAGGTAGCAGGCTATGGAGTGATATTTACACTATCACATACCAGAGGCCAGACAATCAAACTGACAGGGCATCTGTCGGAGGTGCAAGTCCTACAACTGCAACAAAATCTGGGAAATCTGGCTCTGCTTCCAATTCCAACTCCGAAACTCAATTGCATCGAATGTCACTTTTGGATAGTATTTTGCAGGGAGAGCTTCCTTGTGATTTAGAAAAATCTAATCCTACTTATAATATACTGGCACTACTGCATGTACTAGAGGGCTTGAATCAGCTTGCACCTCGCCTGAGAGCTCAGATAGTTTCCGACAGTTTTGCTGAGGGTAAAGTTTTGAATTTGGATGACTTGAGTACAACTGGTGCTAGAGTTTTTCATGAGGAATTTATTAACAGCAAACTCACTCCCAAATTAGCCCGGCAAATTCAAGATGCCCTTGCCTTGTGCAGTGGGAGTCTTCCTTCTTGGTGTTACCAGTTGACAAAAGCATGTCCATTTTTGTTTCCTTTTGAGACTCGGAGACAGTATTTCTATTCAACAGCTTTTGGATTGTCTCGCGCTCTGTACCGTCTTCAGCAGCAGCAAGGTGCTGATGGTCATGGTGCAAATGAACGAGAGGTGAGAGTTGGGAGATTGCAACGGCAGAAAGTCCGCGTTTCCCGAAACCGGATTTTGGATTCTGCTGCAAAAGTAATGGAGATGTATTCCAGCCAAAAATCTGTGCTTGAAGTAGAATATTTTGGTGAAGTGGGCACTGGCTTGGGTCCTACGCTTGAGTTCTACACACTTTTAAGTCATGACCTACAAAGAGTTAGACTTGGCATGTGGAGGTCAAATTCTTCAATGGAGAAAACATCAATGGATATTGATGGAGATGAACATAAAGATGGCAAAAGCAATGGTGACATTGTCCAAGCTCCGCTTGGGTTGTTCCCTCGTCCCTGGCCTCCAAACGCTGTTGCTTCTGATGGTAGCCAGTTTTCAAAAGTGATAGAATACTTTAGGTTGGTTGGGCGTGTGATGGCAAAGGCTCTTCAAGATGGGCGGCTATTGGACTTGCCACTATCAACAGCATTTTATAAGCTTTTGCTTGGTCAAGAGCTTGATTTACATGATATCCTTTCCTTTGATGCTGAGCTTGGAAAGACTCTGCAAGAATTACGTAATCTTGTCTGCCGGAAACTATATTTAGAATCAAATGGTGATAATCGTGATGCCATTGTTGAATTGCGTTTACGTGGAGTGTCAATTGATGACCTGTGTTTAGATTTTACACTCCCTGGCTATCCAGATTATGTGTTGAAACCTGGAGATGAAAATGTTGACATCAATAACTTGGAGGAGTACATATCTTTAGTTGTTGACGCAACAGTGAAAACTGGGATAATGAGGCAAATGGAAGCATTTAGAGCAGGGTTTAATCAGGTCTTTGACATATCATCTTTACAAATATTTACTCCACATGAGTTGGACTATCTGCTTTGCGGTCGTAGAGAGTTGTGGGAGGCGGAGACCCTTGCTGATCATATAAAGTTCGATCATGGATACAATGCCAAGAGCCCTGCAATACTTAATTTGCTCGAGATTATGGGTGAGTTCACGCCAGAGCAGCAGCGTGCCTTCTGCCAGTTTGTTACTGGTGCACCTCGGCTTCCACCTGGTGGTTTGGCAGTGCTGAATCCAAAACTGACGATTGTGAGAAAGCATTCTTCGACTGCAAATAATGCGGCAACCAACGGGACCGGGGTTTCAGAGTTGGCAGATGATGACCTGCCCAGTGTCATGACATGCGCTAATTACCTGAAGCTTCCTCCTTATTCAACCAAGGAAATTATGTTCAAGAAATTATTGTATGCAATCAGTGAAGGGCAAGGATCCTTTGATTTGTCATGGCATTTCTACTTCTCCACTCAAATAATGGCTTTTGTCGTTGGCGCGGTTCTAAACTTATCAACATTGTTGAGGTCAGTTTCTTTACGTTTTCAGATGGTTCTCCGTTGTTTCGGTTCCAAAGTTGCAAATATTTTGATTCTTCACGCATTGTTATTCACTGTGTTTGTGCCTTTCTCTGAGTTTACTTGGTTTGGTTCTGAAGTTGGTCGTATTCGTTTCAGGTTGGATCGACGCAATTTTAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006464 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0030154 GO:0032446 GO:0032502 GO:0032989 GO:0034641 GO:0034645 GO:0036211 GO:0042023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048468 GO:0048856 GO:0048869 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0090558 GO:0090626 GO:0140096 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

1329

Amino Acids

146.83

Weight (kDa)

6.47

Isoelectric Point (pI)

40.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HECT	PF00632	912 - 1245	2.4e-80	HECT-domain (ubiquitin-transferase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38600 AT4G38600 AT4G38600
fragaria_vesca	FvH4_2g01290
malus_domestica	MD00G1173700.v1.1 MD00G1173800.v1.1 MD00G1173900.v1.1 MD05G1120900.v1.1 MD10G1095300.v1.1
prunus_persica	Prupe.8G164700_v2.0.a1
pyrus_communis	pycom05g11490 pycom05g11500 pycom10g10610 pycom10g10620
rosa_chinensis	RchiOBHm_Chr6g0251951 RchiOBHm_Chr6g0252001
rosa_laevigata	RLG00000015410 RLG00000015417
rosa_multiflora	Rmu_sc0002522.1_g000052 Rmu_sc0002522.1_g000062 Rmu_ssc0000303.1_g000016
rosa_roxburghii	Rroxscaffold_7G00216270
rosa_rugosa	Rorug05G0505300.1
rosa_samantha	Rh6AG016800 Rh6AG017300 Rh6AG017400 Rh6AG018000 Rh6AG018100 Rh6AG018900 Rh6AG019000 Rh6CG011400 Rh6DG012700
rosa_wichuraiana	Rw6G000110 Rw6G000120 Rw6G000150 Rw6G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2079, 2925
AasI	GACNNNNNNGTC	1 cut(s)	1686
AatII	GACGTC	1 cut(s)	1690
Acc36I	ACCTGC	1 cut(s)	3624
AccB7I	CCANNNNNTGG	2 cut(s)	1520, 3506
AccI	GTMKAC	2 cut(s)	1052, 1243
AccII	CGCG	4 cut(s)	1093, 2403, 2499, 3782
AciI	CCGC	8 cut(s)	1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782
AclWI	GGATC	9 cut(s)	73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972
AcsI	RAATTY	7 cut(s)	36, 150, 364, 2182, 2228, 2268, 2680
AcuI	CTGAAG	6 cut(s)	164, 275, 1470, 2402, 3668, 3957
AcyI	GRCGYC	1 cut(s)	1687
AdeI	CACNNNGTG	1 cut(s)	3506
AjnI	CCWGG	7 cut(s)	24, 87, 297, 2786, 3124, 3151, 3502
AloI	GAACNNNNNNTCC	2 cut(s)	3665, 3697
Alw21I	GWGCWC	4 cut(s)	802, 862, 2143, 3490
Alw26I	GTCTC	9 cut(s)	426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350
Alw44I	GTGCAC	2 cut(s)	798, 3486
AlwI	GGATC	9 cut(s)	73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972
AlwNI	CAGNNNCTG	6 cut(s)	46, 298, 1013, 1034, 1520, 1562
Ama87I	CYCGRG	2 cut(s)	954, 3425
AoxI	GGCC	3 cut(s)	950, 1895, 2789
ApaLI	GTGCAC	2 cut(s)	798, 3486
ApoI	RAATTY	7 cut(s)	36, 150, 364, 2182, 2228, 2268, 2680
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
AseI	ATTAAT	1 cut(s)	681
Asp700I	GAANNNNTTC	2 cut(s)	942, 3550
AspLEI	GCGC	4 cut(s)	1157, 2405, 3638, 3782
AspS9I	GGNCC	4 cut(s)	9, 1217, 2609, 3585
AsuC2I	CCSGG	2 cut(s)	2263, 3589
AsuHPI	GGTGA	6 cut(s)	188, 2476, 2600, 2759, 3059, 3449
AsuII	TTCGAA	1 cut(s)	240
AsuNHI	GCTAGC	1 cut(s)	484
AvaI	CYCGRG	2 cut(s)	954, 3425
AvaII	GGWCC	4 cut(s)	9, 1217, 2609, 3585
BaeGI	GKGCMC	3 cut(s)	802, 2600, 3490
BamHI	GGATCC	1 cut(s)	3719
BanII	GRGCYC	2 cut(s)	2143, 3407
BbsI	GAAGAC	2 cut(s)	2294, 2408
Bbv12I	GWGCWC	4 cut(s)	802, 862, 2143, 3490
BbvCI	CCTCAGC	1 cut(s)	2166
BceAI	ACGGC	1 cut(s)	2501
BcgI	CGANNNNNNTGC	2 cut(s)	2144, 2178
BciT130I	CCWGG	7 cut(s)	26, 89, 299, 2788, 3126, 3153, 3504
BciVI	GTATCC	3 cut(s)	523, 1852, 3383
BclI	TGATCA	1 cut(s)	3367
BcnI	CCSGG	2 cut(s)	2263, 3589
BcoDI	GTCTC	9 cut(s)	426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350
BfmI	CTRYAG	3 cut(s)	933, 1026, 1479
BfuAI	ACCTGC	1 cut(s)	3624
BfuI	GTATCC	3 cut(s)	523, 1852, 3383
BglI	GCCNNNNNGGC	1 cut(s)	1631
BlpI	GCTNAGC	2 cut(s)	1566, 2979
BmcAI	AGTACT	1 cut(s)	283
Bme1390I	CCNGG	9 cut(s)	26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589
Bme18I	GGWCC	4 cut(s)	9, 1217, 2609, 3585
BmeT110I	CYCGRG	2 cut(s)	954, 3425
BmgT120I	GGNCC	4 cut(s)	9, 1217, 2609, 3585
BmiI	GGNNCC	5 cut(s)	1137, 2610, 3586, 3721, 3853
BmrFI	CCNGG	9 cut(s)	26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589
BmrI	ACTGGG	4 cut(s)	46, 801, 3234, 3615
BmsI	GCATC	8 cut(s)	471, 1462, 1768, 1928, 2014, 2266, 2965, 3049
BmtI	GCTAGC	1 cut(s)	488
BmuI	ACTGGG	4 cut(s)	46, 801, 3234, 3615
BpiI	GAAGAC	2 cut(s)	2294, 2408
BpmI	CTGGAG	3 cut(s)	216, 1758, 3174
Bpu10I	CCTNAGC	1 cut(s)	2166
Bpu1102I	GCTNAGC	2 cut(s)	1566, 2979
Bpu14I	TTCGAA	1 cut(s)	240
BpuEI	CTTGAG	2 cut(s)	2215, 2639
BpuMI	CCSGG	2 cut(s)	2263, 3589
Bsa29I	ATCGAT	2 cut(s)	327, 909
BsaAI	YACGTR	2 cut(s)	3008, 3083
BsaBI	GATNNNNATC	1 cut(s)	77
BsaHI	GRCGYC	1 cut(s)	1687
BsaI	GGTCTC	2 cut(s)	426, 3350
BsaJI	CCNNGG	8 cut(s)	5, 298, 585, 2786, 3124, 3491, 3588, 3669
BsaWI	WCCGGW	1 cut(s)	2511
Bse3DI	GCAATG	2 cut(s)	551, 2749
Bse8I	GATNNNNATC	1 cut(s)	77
BseBI	CCWGG	7 cut(s)	26, 89, 299, 2788, 3126, 3153, 3504
BseCI	ATCGAT	2 cut(s)	327, 909
BseDI	CCNNGG	8 cut(s)	5, 298, 585, 2786, 3124, 3491, 3588, 3669
BseGI	GGATG	7 cut(s)	785, 1312, 1345, 1477, 1807, 1813, 2194
BseJI	GATNNNNATC	1 cut(s)	77
BseMI	GCAATG	2 cut(s)	551, 2749
BseRI	GAGGAG	3 cut(s)	467, 799, 3200
BseSI	GKGCMC	3 cut(s)	802, 2600, 3490
BseYI	CCCAGC	3 cut(s)	1513, 1634, 1826
BsgI	GTGCAG	2 cut(s)	1817, 2311
Bsh1236I	CGCG	4 cut(s)	1093, 2403, 2499, 3782
Bsh1285I	CGRYCG	1 cut(s)	3334
BshFI	GGCC	3 cut(s)	952, 1897, 2791
BshVI	ATCGAT	2 cut(s)	327, 909
BsiEI	CGRYCG	1 cut(s)	3334
BsiHKAI	GWGCWC	4 cut(s)	802, 862, 2143, 3490
BsiHKCI	CYCGRG	2 cut(s)	954, 3425
BsiSI	CCGG	5 cut(s)	1430, 2263, 2512, 3022, 3588
BslFI	GGGAC	5 cut(s)	34, 518, 1304, 2769, 3598
BsmAI	GTCTC	9 cut(s)	426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350
BsmFI	GGGAC	5 cut(s)	34, 518, 1304, 2769, 3598
BsmI	GAATGC	1 cut(s)	3550
BsnI	GGCC	3 cut(s)	952, 1897, 2791
Bso31I	GGTCTC	2 cut(s)	426, 3350
BsoBI	CYCGRG	2 cut(s)	954, 3425
Bsp119I	TTCGAA	1 cut(s)	240
Bsp1286I	GDGCHC	6 cut(s)	802, 862, 2143, 2600, 3407, 3490
Bsp1720I	GCTNAGC	2 cut(s)	1566, 2979
BspACI	CCGC	8 cut(s)	1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782
BspANI	GGCC	3 cut(s)	952, 1897, 2791
BspDI	ATCGAT	2 cut(s)	327, 909
BspFNI	CGCG	4 cut(s)	1093, 2403, 2499, 3782
BspHI	TCATGA	3 cut(s)	2221, 2641, 3627
BspLI	GGNNCC	5 cut(s)	1137, 2610, 3586, 3721, 3853
BspMI	ACCTGC	1 cut(s)	3624
BspOI	GCTAGC	1 cut(s)	488
BspPI	GGATC	9 cut(s)	73, 289, 905, 1089, 1651, 1706, 3714, 3727, 3972
BspQI	GCTCTTC	3 cut(s)	672, 1145, 2883
BspT104I	TTCGAA	1 cut(s)	240
BspTNI	GGTCTC	2 cut(s)	426, 3350
BsrDI	GCAATG	2 cut(s)	551, 2749
BssECI	CCNNGG	8 cut(s)	5, 298, 585, 2786, 3124, 3491, 3588, 3669
BssNI	GRCGYC	1 cut(s)	1687
BssT1I	CCWWGG	2 cut(s)	585, 3669
Bst2UI	CCWGG	7 cut(s)	26, 89, 299, 2788, 3126, 3153, 3504
Bst6I	CTCTTC	5 cut(s)	672, 933, 1145, 1419, 2883
BstACI	GRCGYC	1 cut(s)	1687
BstAPI	GCANNNNNTGC	1 cut(s)	3569
BstBAI	YACGTR	2 cut(s)	3008, 3083
BstBI	TTCGAA	1 cut(s)	240
BstDSI	CCRYGG	1 cut(s)	5
BstF5I	GGATG	7 cut(s)	785, 1312, 1345, 1477, 1807, 1813, 2194
BstFNI	CGCG	4 cut(s)	1093, 2403, 2499, 3782
BstHHI	GCGC	4 cut(s)	1157, 2405, 3638, 3782
BstMAI	GTCTC	9 cut(s)	426, 876, 997, 1452, 1780, 2351, 2359, 2403, 3350
BstMCI	CGRYCG	1 cut(s)	3334
BstNI	CCWGG	7 cut(s)	26, 89, 299, 2788, 3126, 3153, 3504
BstNSI	RCATGY	6 cut(s)	260, 1429, 2102, 2337, 2671, 3636
BstSCI	CCNGG	9 cut(s)	24, 87, 297, 2261, 2786, 3124, 3151, 3502, 3587
BstSFI	CTRYAG	3 cut(s)	933, 1026, 1479
BstSLI	GKGCMC	3 cut(s)	802, 2600, 3490
BstSNI	TACGTA	1 cut(s)	3008
BstUI	CGCG	4 cut(s)	1093, 2403, 2499, 3782
BstV2I	GAAGAC	2 cut(s)	2294, 2408
BstX2I	RGATCY	3 cut(s)	294, 1643, 3719
BstYI	RGATCY	3 cut(s)	294, 1643, 3719
Bsu15I	ATCGAT	2 cut(s)	327, 909
BsuI	GTATCC	3 cut(s)	523, 1852, 3383
BsuRI	GGCC	3 cut(s)	952, 1897, 2791
BsuTUI	ATCGAT	2 cut(s)	327, 909
BtgI	CCRYGG	1 cut(s)	5
BtgZI	GCGATG	2 cut(s)	1064, 1622
BtsCI	GGATG	7 cut(s)	785, 1312, 1345, 1477, 1807, 1813, 2194
BtsI	GCAGTG	2 cut(s)	2299, 3522
BveI	ACCTGC	1 cut(s)	3624
CaiI	CAGNNNCTG	6 cut(s)	46, 298, 1013, 1034, 1520, 1562
CciI	TCATGA	3 cut(s)	2221, 2641, 3627
CfoI	GCGC	4 cut(s)	1157, 2405, 3638, 3782
Cfr13I	GGNCC	4 cut(s)	9, 1217, 2609, 3585
ClaI	ATCGAT	2 cut(s)	327, 909
CseI	GACGC	4 cut(s)	131, 836, 3218, 3978
CsiI	ACCWGGT	2 cut(s)	24, 3502
CspCI	CAANNNNNGTGG	4 cut(s)	191, 226, 3294, 3329
DraI	TTTAAA	3 cut(s)	273, 342, 3979
DraIII	CACNNNGTG	1 cut(s)	3506
DrdI	GACNNNNNNGTC	1 cut(s)	1686
DseDI	GACNNNNNNGTC	1 cut(s)	1686
Eam1104I	CTCTTC	5 cut(s)	672, 933, 1145, 1419, 2883
EarI	CTCTTC	5 cut(s)	672, 933, 1145, 1419, 2883
EciI	GGCGGA	1 cut(s)	3368
Ecl136II	GAGCTC	1 cut(s)	2141
Eco105I	TACGTA	1 cut(s)	3008
Eco130I	CCWWGG	2 cut(s)	585, 3669
Eco24I	GRGCYC	2 cut(s)	2143, 3407
Eco31I	GGTCTC	2 cut(s)	426, 3350
Eco32I	GATATC	1 cut(s)	2962
Eco47I	GGWCC	4 cut(s)	9, 1217, 2609, 3585
Eco53kI	GAGCTC	1 cut(s)	2141
Eco57I	CTGAAG	6 cut(s)	164, 275, 1470, 2402, 3668, 3957
Eco88I	CYCGRG	2 cut(s)	954, 3425
EcoICRI	GAGCTC	1 cut(s)	2141
EcoO109I	RGGNCCY	2 cut(s)	1217, 2609
EcoRI	GAATTC	1 cut(s)	364
EcoRII	CCWGG	7 cut(s)	24, 87, 297, 2786, 3124, 3151, 3502
EcoRV	GATATC	1 cut(s)	2962
EcoT14I	CCWWGG	2 cut(s)	585, 3669
EcoT22I	ATGCAT	1 cut(s)	356
EcoT38I	GRGCYC	2 cut(s)	2143, 3407
ErhI	CCWWGG	2 cut(s)	585, 3669
FalI	AAGNNNNNCTT	6 cut(s)	930, 962, 2265, 2297, 2751, 2783
FaqI	GGGAC	5 cut(s)	34, 518, 1304, 2769, 3598
FbaI	TGATCA	1 cut(s)	3367
FblI	GTMKAC	2 cut(s)	1052, 1243
FokI	GGATG	7 cut(s)	772, 1319, 1352, 1484, 1814, 1820, 2201
FriOI	GRGCYC	2 cut(s)	2143, 3407
GlaI	GCGC	4 cut(s)	1156, 2404, 3637, 3781
GsaI	CCCAGC	3 cut(s)	1517, 1638, 1830
GsuI	CTGGAG	3 cut(s)	216, 1758, 3174
HaeIII	GGCC	3 cut(s)	952, 1897, 2791
HapII	CCGG	5 cut(s)	1430, 2263, 2512, 3022, 3588
HgaI	GACGC	4 cut(s)	131, 836, 3218, 3978
HhaI	GCGC	4 cut(s)	1157, 2405, 3638, 3782
Hin1I	GRCGYC	1 cut(s)	1687
Hin6I	GCGC	4 cut(s)	1155, 2403, 3636, 3780
HinP1I	GCGC	4 cut(s)	1155, 2403, 3636, 3780
HincII	GTYRAC	4 cut(s)	228, 2325, 3169, 3208
HindII	GTYRAC	4 cut(s)	228, 2325, 3169, 3208
HindIII	AAGCTT	5 cut(s)	266, 411, 617, 2927, 3650
HpaI	GTTAAC	1 cut(s)	228
HpaII	CCGG	5 cut(s)	1430, 2263, 2512, 3022, 3588
HphI	GGTGA	6 cut(s)	188, 2476, 2600, 2759, 3059, 3449
Hpy99I	CGWCG	3 cut(s)	125, 902, 3972
HpyCH4IV	ACGT	6 cut(s)	102, 897, 1687, 3007, 3082, 3823
HpySE526I	ACGT	6 cut(s)	102, 897, 1687, 3007, 3082, 3823
Hsp92I	GRCGYC	1 cut(s)	1687
HspAI	GCGC	4 cut(s)	1155, 2403, 3636, 3780
Ksp22I	TGATCA	1 cut(s)	3367
KspAI	GTTAAC	1 cut(s)	228
LguI	GCTCTTC	3 cut(s)	672, 1145, 2883
LmnI	GCTCC	2 cut(s)	729, 2767
LweI	GCATC	8 cut(s)	471, 1462, 1768, 1928, 2014, 2266, 2965, 3049
MabI	ACCWGGT	2 cut(s)	24, 3502
MaeII	ACGT	6 cut(s)	102, 897, 1687, 3007, 3082, 3823
MaeIII	GTNAC	7 cut(s)	130, 318, 1496, 2013, 2315, 2747, 3478
MfeI	CAATTG	2 cut(s)	2000, 3093
MflI	RGATCY	3 cut(s)	294, 1643, 3719
MhlI	GDGCHC	6 cut(s)	802, 862, 2143, 2600, 3407, 3490
MlyI	GAGTC	7 cut(s)	180, 778, 1403, 1454, 2308, 2353, 2986
MmeI	TCCRAC	7 cut(s)	137, 294, 1906, 2010, 2178, 3294, 3942
Mph1103I	ATGCAT	1 cut(s)	356
MroXI	GAANNNNTTC	2 cut(s)	942, 3550
MslI	CAYNNNNRTG	1 cut(s)	2730
MspI	CCGG	5 cut(s)	1430, 2263, 2512, 3022, 3588
MspR9I	CCNGG	9 cut(s)	26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589
MunI	CAATTG	2 cut(s)	2000, 3093
Mva1269I	GAATGC	1 cut(s)	3550
MvaI	CCWGG	7 cut(s)	26, 89, 299, 2788, 3126, 3153, 3504
MvnI	CGCG	4 cut(s)	1093, 2403, 2499, 3782
NciI	CCSGG	2 cut(s)	2263, 3589
NheI	GCTAGC	1 cut(s)	484
NlaIV	GGNNCC	5 cut(s)	1137, 2610, 3586, 3721, 3853
NmeAIII	GCCGAG	1 cut(s)	3472
NmuCI	GTSAC	3 cut(s)	1496, 2013, 2747
NsiI	ATGCAT	1 cut(s)	356
NspI	RCATGY	6 cut(s)	260, 1429, 2102, 2337, 2671, 3636
NspV	TTCGAA	1 cut(s)	240
PaeI	GCATGC	1 cut(s)	1429
PaeR7I	CTCGAG	2 cut(s)	954, 3425
PagI	TCATGA	3 cut(s)	2221, 2641, 3627
PciSI	GCTCTTC	3 cut(s)	672, 1145, 2883
PcsI	WCGNNNNNNNCGW	3 cut(s)	108, 906, 961
PctI	GAATGC	1 cut(s)	3550
PdmI	GAANNNNTTC	2 cut(s)	942, 3550
PflFI	GACNNNGTC	1 cut(s)	2753
PflMI	CCANNNNNTGG	2 cut(s)	1520, 3506
PfoI	TCCNGGA	1 cut(s)	87
PleI	GAGTC	7 cut(s)	179, 777, 1403, 1454, 2307, 2353, 2986
PpsI	GAGTC	7 cut(s)	179, 777, 1403, 1454, 2307, 2353, 2986
Ppu21I	YACGTR	2 cut(s)	3008, 3083
PpuMI	RGGWCCY	2 cut(s)	1217, 2609
PshBI	ATTAAT	1 cut(s)	681
PsiI	TTATAA	2 cut(s)	2079, 2925
Psp124BI	GAGCTC	1 cut(s)	2143
Psp5II	RGGWCCY	2 cut(s)	1217, 2609
Psp6I	CCWGG	7 cut(s)	24, 87, 297, 2786, 3124, 3151, 3502
PspFI	CCCAGC	3 cut(s)	1513, 1634, 1826
PspGI	CCWGG	7 cut(s)	24, 87, 297, 2786, 3124, 3151, 3502
PspN4I	GGNNCC	5 cut(s)	1137, 2610, 3586, 3721, 3853
PspPI	GGNCC	4 cut(s)	9, 1217, 2609, 3585
PspPPI	RGGWCCY	2 cut(s)	1217, 2609
PspXI	VCTCGAGB	1 cut(s)	954
PsrI	GAACNNNNNNTAC	2 cut(s)	1009, 1041
PstNI	CAGNNNCTG	6 cut(s)	46, 298, 1013, 1034, 1520, 1562
PsuI	RGATCY	3 cut(s)	294, 1643, 3719
PsyI	GACNNNGTC	1 cut(s)	2753
RseI	CAYNNNNRTG	1 cut(s)	2730
SacI	GAGCTC	1 cut(s)	2143
SapI	GCTCTTC	3 cut(s)	672, 1145, 2883
Sau96I	GGNCC	4 cut(s)	9, 1217, 2609, 3585
ScaI	AGTACT	1 cut(s)	283
SchI	GAGTC	7 cut(s)	180, 778, 1403, 1454, 2308, 2353, 2986
ScrFI	CCNGG	9 cut(s)	26, 89, 299, 2263, 2788, 3126, 3153, 3504, 3589
SduI	GDGCHC	6 cut(s)	802, 862, 2143, 2600, 3407, 3490
SexAI	ACCWGGT	2 cut(s)	24, 3502
SfaNI	GCATC	8 cut(s)	471, 1462, 1768, 1928, 2014, 2266, 2965, 3049
SfcI	CTRYAG	3 cut(s)	933, 1026, 1479
Sfr274I	CTCGAG	2 cut(s)	954, 3425
SfuI	TTCGAA	1 cut(s)	240
SinI	GGWCC	4 cut(s)	9, 1217, 2609, 3585
SlaI	CTCGAG	2 cut(s)	954, 3425
SmiMI	CAYNNNNRTG	1 cut(s)	2730
SmlI	CTYRAG	4 cut(s)	954, 2194, 2618, 3425
SmoI	CTYRAG	4 cut(s)	954, 2194, 2618, 3425
SnaBI	TACGTA	1 cut(s)	3008
SphI	GCATGC	1 cut(s)	1429
SsiI	CCGC	8 cut(s)	1626, 2497, 2765, 2890, 3330, 3353, 3572, 3782
SspI	AATATT	3 cut(s)	2582, 3297, 3868
SstI	GAGCTC	1 cut(s)	2143
StyD4I	CCNGG	9 cut(s)	24, 87, 297, 2261, 2786, 3124, 3151, 3502, 3587
StyI	CCWWGG	2 cut(s)	585, 3669
TaiI	ACGT	6 cut(s)	105, 900, 1690, 3010, 3085, 3826
TatI	WGTACW	7 cut(s)	281, 456, 958, 1438, 2101, 2198, 3189
TauI	GCSGC	3 cut(s)	1628, 2893, 3575
TseFI	GTSAC	3 cut(s)	1496, 2013, 2747
Tsp45I	GTSAC	3 cut(s)	1496, 2013, 2747
TspGWI	ACGGA	1 cut(s)	3830
Tth111I	GACNNNGTC	1 cut(s)	2753
Van91I	CCANNNNNTGG	2 cut(s)	1520, 3506
VneI	GTGCAC	2 cut(s)	798, 3486
VpaK11BI	GGWCC	4 cut(s)	9, 1217, 2609, 3585
VspI	ATTAAT	1 cut(s)	681
XapI	RAATTY	7 cut(s)	36, 150, 364, 2182, 2228, 2268, 2680
XceI	RCATGY	6 cut(s)	260, 1429, 2102, 2337, 2671, 3636
XcmI	CCANNNNNNNNNTGG	4 cut(s)	240, 2765, 3479, 3760
XhoI	CTCGAG	2 cut(s)	954, 3425
XmiI	GTMKAC	2 cut(s)	1052, 1243
XmnI	GAANNNNTTC	2 cut(s)	942, 3550
ZraI	GACGTC	1 cut(s)	1688
ZrmI	AGTACT	1 cut(s)	283
Zsp2I	ATGCAT	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.