transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02590 AT4G02590 AT4G02590 |
| fragaria_vesca | FvH4_2g22560 FvH4_2g22560 FvH4_6g02900 FvH4_6g02900 FvH4_6g02900 FvH4_6g02900 FvH4_6g02900 FvH4_6g02900 |
| malus_domestica | MD04G1224700.v1.1 MD05G1206200.v1.1 MD10G1193200.v1.1 MD12G1241500.v1.1 |
| prunus_persica | Prupe.6G343400_v2.0.a1 Prupe.6G343400_v2.0.a1 Prupe.8G232600_v2.0.a1 |
| pyrus_communis | pycom04g19790 pycom10g16690 pycom12g22100 |
| rosa_chinensis | RchiOBHm_Chr3g0451111 RchiOBHm_Chr6g0289601 |
| rosa_laevigata | RLG00000012289 RLG00000025689 |
| rosa_multiflora | Rmu_sc0005376.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00428580 Rroxscaffold_7G00177820 |
| rosa_rugosa | Rorug02G0631400 Rorug02G0631500 Rorug02G0631600 Rorug02G0631700 Rorug02G0631800 Rorug06G0205100 |
| rosa_samantha | Rh3AG034400 Rh3BG034700 Rh3CG033400 Rh3DG034400 Rh6AG316600 Rh6BG323000 Rh6CG329600 Rh6DG315000 |
| rosa_wichuraiana | Rw3G002500 Rw6G027300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 925 |
| AccBSI | CCGCTC | 2 cut(s) | 579, 751 |
| AccII | CGCG | 1 cut(s) | 391 |
| AclI | AACGTT | 1 cut(s) | 1059 |
| AclWI | GGATC | 1 cut(s) | 725 |
| AcoI | YGGCCR | 3 cut(s) | 300, 408, 643 |
| AcsI | RAATTY | 3 cut(s) | 17, 144, 345 |
| AcuI | CTGAAG | 1 cut(s) | 341 |
| AcyI | GRCGYC | 1 cut(s) | 431 |
| AdeI | CACNNNGTG | 1 cut(s) | 105 |
| AfaI | GTAC | 1 cut(s) | 6 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 260, 316, 505, 883, 1090 |
| AgsI | TTSAA | 2 cut(s) | 149, 556 |
| AhlI | ACTAGT | 1 cut(s) | 799 |
| AjnI | CCWGG | 1 cut(s) | 321 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1044, 1076 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 353, 385, 1172 |
| Alw26I | GTCTC | 2 cut(s) | 94, 429 |
| AlwI | GGATC | 1 cut(s) | 725 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 668 |
| Ama87I | CYCGRG | 1 cut(s) | 338 |
| AoxI | GGCC | 9 cut(s) | 262, 300, 318, 324, 352, 408, 469, 643, 1119 |
| ApeKI | GCWGC | 8 cut(s) | 31, 212, 442, 445, 668, 671, 830, 1067 |
| ApoI | RAATTY | 3 cut(s) | 17, 144, 345 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 587, 801 |
| AspLEI | GCGC | 3 cut(s) | 97, 391, 759 |
| AspS9I | GGNCC | 1 cut(s) | 319 |
| AsuHPI | GGTGA | 3 cut(s) | 72, 243, 1137 |
| AvaI | CYCGRG | 1 cut(s) | 338 |
| AxyI | CCTNAGG | 1 cut(s) | 869 |
| BalI | TGGCCA | 2 cut(s) | 302, 645 |
| BanI | GGYRCC | 1 cut(s) | 925 |
| BauI | CACGAG | 1 cut(s) | 560 |
| BbvCI | CCTCAGC | 1 cut(s) | 1123 |
| BbvI | GCAGC | 8 cut(s) | 43, 199, 429, 457, 655, 683, 817, 1054 |
| BccI | CCATC | 4 cut(s) | 85, 392, 1013, 1118 |
| BceAI | ACGGC | 1 cut(s) | 478 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 424, 458 |
| BciT130I | CCWGG | 1 cut(s) | 323 |
| BcoDI | GTCTC | 2 cut(s) | 94, 429 |
| BcuI | ACTAGT | 1 cut(s) | 799 |
| BfaI | CTAG | 4 cut(s) | 711, 800, 807, 1158 |
| BfmI | CTRYAG | 2 cut(s) | 443, 669 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 477 |
| BlpI | GCTNAGC | 1 cut(s) | 1041 |
| Bme1390I | CCNGG | 1 cut(s) | 323 |
| BmeT110I | CYCGRG | 1 cut(s) | 338 |
| BmgT120I | GGNCC | 1 cut(s) | 319 |
| BmiI | GGNNCC | 4 cut(s) | 497, 590, 875, 927 |
| BmrFI | CCNGG | 1 cut(s) | 323 |
| BmsI | GCATC | 4 cut(s) | 367, 429, 688, 1110 |
| Bpu10I | CCTNAGC | 2 cut(s) | 466, 1123 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1041 |
| BsaAI | YACGTR | 1 cut(s) | 859 |
| BsaHI | GRCGYC | 1 cut(s) | 431 |
| BsaJI | CCNNGG | 6 cut(s) | 297, 312, 321, 499, 640, 698 |
| BsaWI | WCCGGW | 1 cut(s) | 1147 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 405, 435 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 260, 316, 505, 883, 1090 |
| Bse118I | RCCGGY | 1 cut(s) | 994 |
| Bse1I | ACTGG | 1 cut(s) | 1122 |
| Bse21I | CCTNAGG | 1 cut(s) | 869 |
| Bse3DI | GCAATG | 4 cut(s) | 696, 741, 788, 1077 |
| BseBI | CCWGG | 1 cut(s) | 323 |
| BseDI | CCNNGG | 6 cut(s) | 297, 312, 321, 499, 640, 698 |
| BseGI | GGATG | 1 cut(s) | 679 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 260, 316, 505, 883, 1090 |
| BseMI | GCAATG | 4 cut(s) | 696, 741, 788, 1077 |
| BseMII | CTCAG | 3 cut(s) | 440, 480, 1137 |
| BseNI | ACTGG | 1 cut(s) | 1122 |
| BseRI | GAGGAG | 2 cut(s) | 273, 578 |
| BseXI | GCAGC | 8 cut(s) | 43, 199, 429, 457, 655, 683, 817, 1054 |
| BseYI | CCCAGC | 1 cut(s) | 545 |
| Bsh1236I | CGCG | 1 cut(s) | 391 |
| BshFI | GGCC | 9 cut(s) | 264, 302, 320, 326, 354, 410, 471, 645, 1121 |
| BshNI | GGYRCC | 1 cut(s) | 925 |
| BsiHKCI | CYCGRG | 1 cut(s) | 338 |
| BsiSI | CCGG | 4 cut(s) | 411, 456, 995, 1148 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 260, 316, 505, 883, 1090 |
| BsmAI | GTCTC | 2 cut(s) | 94, 429 |
| BsnI | GGCC | 9 cut(s) | 264, 302, 320, 326, 354, 410, 471, 645, 1121 |
| BsoBI | CYCGRG | 1 cut(s) | 338 |
| Bsp143I | GATC | 1 cut(s) | 730 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1041 |
| Bsp19I | CCATGG | 3 cut(s) | 297, 499, 640 |
| BspANI | GGCC | 9 cut(s) | 264, 302, 320, 326, 354, 410, 471, 645, 1121 |
| BspCNI | CTCAG | 3 cut(s) | 439, 479, 1136 |
| BspFNI | CGCG | 1 cut(s) | 391 |
| BspLI | GGNNCC | 4 cut(s) | 497, 590, 875, 927 |
| BspMAI | CTGCAG | 2 cut(s) | 447, 673 |
| BspPI | GGATC | 1 cut(s) | 725 |
| BspT107I | GGYRCC | 1 cut(s) | 925 |
| BsrBI | CCGCTC | 2 cut(s) | 579, 751 |
| BsrDI | GCAATG | 4 cut(s) | 696, 741, 788, 1077 |
| BsrFI | RCCGGY | 1 cut(s) | 994 |
| BsrI | ACTGG | 1 cut(s) | 1122 |
| BssAI | RCCGGY | 1 cut(s) | 994 |
| BssECI | CCNNGG | 6 cut(s) | 297, 312, 321, 499, 640, 698 |
| BssMI | GATC | 1 cut(s) | 730 |
| BssNI | GRCGYC | 1 cut(s) | 431 |
| BssSI | CACGAG | 1 cut(s) | 560 |
| BssT1I | CCWWGG | 4 cut(s) | 297, 499, 640, 698 |
| Bst2BI | CACGAG | 1 cut(s) | 560 |
| Bst2UI | CCWGG | 1 cut(s) | 323 |
| Bst4CI | ACNGT | 1 cut(s) | 664 |
| Bst6I | CTCTTC | 2 cut(s) | 224, 709 |
| BstACI | GRCGYC | 1 cut(s) | 431 |
| BstBAI | YACGTR | 1 cut(s) | 859 |
| BstC8I | GCNNGC | 2 cut(s) | 116, 708 |
| BstDEI | CTNAG | 5 cut(s) | 426, 466, 869, 1041, 1123 |
| BstDSI | CCRYGG | 3 cut(s) | 297, 499, 640 |
| BstF5I | GGATG | 1 cut(s) | 679 |
| BstFNI | CGCG | 1 cut(s) | 391 |
| BstHHI | GCGC | 3 cut(s) | 97, 391, 759 |
| BstKTI | GATC | 1 cut(s) | 733 |
| BstMAI | GTCTC | 2 cut(s) | 94, 429 |
| BstMBI | GATC | 1 cut(s) | 730 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 270, 386, 477 |
| BstNI | CCWGG | 1 cut(s) | 323 |
| BstNSI | RCATGY | 1 cut(s) | 209 |
| BstSCI | CCNGG | 1 cut(s) | 321 |
| BstSFI | CTRYAG | 2 cut(s) | 443, 669 |
| BstUI | CGCG | 1 cut(s) | 391 |
| BstV1I | GCAGC | 8 cut(s) | 43, 199, 429, 457, 655, 683, 817, 1054 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1117 |
| Bsu36I | CCTNAGG | 1 cut(s) | 869 |
| BsuRI | GGCC | 9 cut(s) | 264, 302, 320, 326, 354, 410, 471, 645, 1121 |
| BtgI | CCRYGG | 3 cut(s) | 297, 499, 640 |
| BtgZI | GCGATG | 1 cut(s) | 411 |
| BtsCI | GGATG | 1 cut(s) | 679 |
| BtsIMutI | CAGTG | 1 cut(s) | 1115 |
| Cac8I | GCNNGC | 2 cut(s) | 116, 708 |
| CaiI | CAGNNNCTG | 1 cut(s) | 668 |
| CfoI | GCGC | 3 cut(s) | 97, 391, 759 |
| Cfr10I | RCCGGY | 1 cut(s) | 994 |
| Cfr13I | GGNCC | 1 cut(s) | 319 |
| CseI | GACGC | 2 cut(s) | 420, 799 |
| Csp6I | GTAC | 1 cut(s) | 5 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 980, 1015 |
| CviAII | CATG | 7 cut(s) | 206, 298, 500, 641, 835, 895, 1105 |
| CviQI | GTAC | 1 cut(s) | 5 |
| DdeI | CTNAG | 5 cut(s) | 426, 466, 869, 1041, 1123 |
| DpnI | GATC | 1 cut(s) | 732 |
| DpnII | GATC | 1 cut(s) | 730 |
| DraIII | CACNNNGTG | 1 cut(s) | 105 |
| EaeI | YGGCCR | 3 cut(s) | 300, 408, 643 |
| Eam1104I | CTCTTC | 2 cut(s) | 224, 709 |
| EarI | CTCTTC | 2 cut(s) | 224, 709 |
| EciI | GGCGGA | 2 cut(s) | 361, 924 |
| Eco130I | CCWWGG | 4 cut(s) | 297, 499, 640, 698 |
| Eco57I | CTGAAG | 1 cut(s) | 341 |
| Eco81I | CCTNAGG | 1 cut(s) | 869 |
| Eco88I | CYCGRG | 1 cut(s) | 338 |
| EcoRII | CCWGG | 1 cut(s) | 321 |
| EcoT14I | CCWWGG | 4 cut(s) | 297, 499, 640, 698 |
| ErhI | CCWWGG | 4 cut(s) | 297, 499, 640, 698 |
| FaeI | CATG | 7 cut(s) | 209, 301, 503, 644, 838, 898, 1108 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FatI | CATG | 7 cut(s) | 205, 297, 499, 640, 834, 894, 1104 |
| FauI | CCCGC | 1 cut(s) | 572 |
| FokI | GGATG | 1 cut(s) | 666 |
| FspBI | CTAG | 4 cut(s) | 711, 800, 807, 1158 |
| GlaI | GCGC | 3 cut(s) | 96, 390, 758 |
| GsaI | CCCAGC | 1 cut(s) | 549 |
| HaeIII | GGCC | 9 cut(s) | 264, 302, 320, 326, 354, 410, 471, 645, 1121 |
| HapII | CCGG | 4 cut(s) | 411, 456, 995, 1148 |
| HgaI | GACGC | 2 cut(s) | 420, 799 |
| HhaI | GCGC | 3 cut(s) | 97, 391, 759 |
| Hin1I | GRCGYC | 1 cut(s) | 431 |
| Hin1II | CATG | 7 cut(s) | 209, 301, 503, 644, 838, 898, 1108 |
| Hin6I | GCGC | 3 cut(s) | 95, 389, 757 |
| HinP1I | GCGC | 3 cut(s) | 95, 389, 757 |
| HindIII | AAGCTT | 2 cut(s) | 177, 1043 |
| HinfI | GANTC | 3 cut(s) | 248, 258, 780 |
| HpaII | CCGG | 4 cut(s) | 411, 456, 995, 1148 |
| HphI | GGTGA | 3 cut(s) | 72, 243, 1137 |
| Hpy188I | TCNGA | 4 cut(s) | 111, 316, 360, 785 |
| Hpy99I | CGWCG | 2 cut(s) | 332, 436 |
| HpyAV | CCTTC | 3 cut(s) | 365, 962, 971 |
| HpyCH4III | ACNGT | 1 cut(s) | 664 |
| HpyCH4IV | ACGT | 2 cut(s) | 858, 1059 |
| HpyCH4V | TGCA | 9 cut(s) | 24, 51, 205, 445, 671, 793, 1070, 1075, 1101 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 270, 386, 477 |
| HpyF3I | CTNAG | 5 cut(s) | 426, 466, 869, 1041, 1123 |
| HpySE526I | ACGT | 2 cut(s) | 858, 1059 |
| Hsp92I | GRCGYC | 1 cut(s) | 431 |
| Hsp92II | CATG | 7 cut(s) | 209, 301, 503, 644, 838, 898, 1108 |
| HspAI | GCGC | 3 cut(s) | 95, 389, 757 |
| Kzo9I | GATC | 1 cut(s) | 730 |
| LmnI | GCTCC | 4 cut(s) | 532, 576, 879, 911 |
| Lsp1109I | GCAGC | 8 cut(s) | 43, 199, 429, 457, 655, 683, 817, 1054 |
| LweI | GCATC | 4 cut(s) | 367, 429, 688, 1110 |
| MaeI | CTAG | 4 cut(s) | 711, 800, 807, 1158 |
| MaeII | ACGT | 2 cut(s) | 858, 1059 |
| MaeIII | GTNAC | 1 cut(s) | 934 |
| MalI | GATC | 1 cut(s) | 732 |
| MbiI | CCGCTC | 2 cut(s) | 579, 751 |
| MboI | GATC | 1 cut(s) | 730 |
| MboII | GAAGA | 5 cut(s) | 211, 726, 945, 977, 1064 |
| MlsI | TGGCCA | 2 cut(s) | 302, 645 |
| MluCI | AATT | 5 cut(s) | 17, 144, 345, 382, 1128 |
| MluNI | TGGCCA | 2 cut(s) | 302, 645 |
| MlyI | GAGTC | 2 cut(s) | 242, 252 |
| Mox20I | TGGCCA | 2 cut(s) | 302, 645 |
| MroXI | GAANNNNTTC | 2 cut(s) | 587, 801 |
| MscI | TGGCCA | 2 cut(s) | 302, 645 |
| MseI | TTAA | 1 cut(s) | 60 |
| Msp20I | TGGCCA | 2 cut(s) | 302, 645 |
| MspA1I | CMGCKG | 1 cut(s) | 448 |
| MspI | CCGG | 4 cut(s) | 411, 456, 995, 1148 |
| MspR9I | CCNGG | 1 cut(s) | 323 |
| MvaI | CCWGG | 1 cut(s) | 323 |
| MvnI | CGCG | 1 cut(s) | 391 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 270, 386, 477 |
| NcoI | CCATGG | 3 cut(s) | 297, 499, 640 |
| NdeII | GATC | 1 cut(s) | 730 |
| NlaIII | CATG | 7 cut(s) | 209, 301, 503, 644, 838, 898, 1108 |
| NlaIV | GGNNCC | 4 cut(s) | 497, 590, 875, 927 |
| NmeAIII | GCCGAG | 4 cut(s) | 240, 330, 772, 785 |
| NspI | RCATGY | 1 cut(s) | 209 |
| PaeR7I | CTCGAG | 1 cut(s) | 338 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 336, 372 |
| PdmI | GAANNNNTTC | 2 cut(s) | 587, 801 |
| PfeI | GAWTC | 1 cut(s) | 780 |
| PflFI | GACNNNGTC | 1 cut(s) | 599 |
| PleI | GAGTC | 2 cut(s) | 242, 252 |
| PpsI | GAGTC | 2 cut(s) | 242, 252 |
| Ppu21I | YACGTR | 1 cut(s) | 859 |
| Psp1406I | AACGTT | 1 cut(s) | 1059 |
| Psp6I | CCWGG | 1 cut(s) | 321 |
| PspFI | CCCAGC | 1 cut(s) | 545 |
| PspGI | CCWGG | 1 cut(s) | 321 |
| PspN4I | GGNNCC | 4 cut(s) | 497, 590, 875, 927 |
| PspPI | GGNCC | 1 cut(s) | 319 |
| PspXI | VCTCGAGB | 1 cut(s) | 338 |
| PstI | CTGCAG | 2 cut(s) | 447, 673 |
| PstNI | CAGNNNCTG | 1 cut(s) | 668 |
| PsyI | GACNNNGTC | 1 cut(s) | 599 |
| PvuII | CAGCTG | 1 cut(s) | 448 |
| RsaI | GTAC | 1 cut(s) | 6 |
| RsaNI | GTAC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 60 |
| Sau3AI | GATC | 1 cut(s) | 730 |
| Sau96I | GGNCC | 1 cut(s) | 319 |
| SchI | GAGTC | 2 cut(s) | 242, 252 |
| ScrFI | CCNGG | 1 cut(s) | 323 |
| SfaNI | GCATC | 4 cut(s) | 367, 429, 688, 1110 |
| SfcI | CTRYAG | 2 cut(s) | 443, 669 |
| Sfr274I | CTCGAG | 1 cut(s) | 338 |
| SlaI | CTCGAG | 1 cut(s) | 338 |
| SmlI | CTYRAG | 1 cut(s) | 338 |
| SmoI | CTYRAG | 1 cut(s) | 338 |
| SpeI | ACTAGT | 1 cut(s) | 799 |
| Sse9I | AATT | 5 cut(s) | 17, 144, 345, 382, 1128 |
| SspMI | CTAG | 4 cut(s) | 711, 800, 807, 1158 |
| StyD4I | CCNGG | 1 cut(s) | 321 |
| StyI | CCWWGG | 4 cut(s) | 297, 499, 640, 698 |
| TaaI | ACNGT | 1 cut(s) | 664 |
| TaiI | ACGT | 2 cut(s) | 861, 1062 |
| TaqI | TCGA | 4 cut(s) | 256, 339, 434, 613 |
| TasI | AATT | 5 cut(s) | 17, 144, 345, 382, 1128 |
| TauI | GCSGC | 3 cut(s) | 483, 486, 975 |
| TfiI | GAWTC | 1 cut(s) | 780 |
| Tru1I | TTAA | 1 cut(s) | 60 |
| Tru9I | TTAA | 1 cut(s) | 60 |
| TscAI | CASTG | 1 cut(s) | 1122 |
| TseI | GCWGC | 8 cut(s) | 31, 212, 442, 445, 668, 671, 830, 1067 |
| TspDTI | ATGAA | 2 cut(s) | 211, 1193 |
| TspGWI | ACGGA | 5 cut(s) | 93, 504, 836, 946, 953 |
| TspRI | CASTG | 1 cut(s) | 1122 |
| Tth111I | GACNNNGTC | 1 cut(s) | 599 |
| XapI | RAATTY | 3 cut(s) | 17, 144, 345 |
| XceI | RCATGY | 1 cut(s) | 209 |
| XhoI | CTCGAG | 1 cut(s) | 338 |
| XmnI | GAANNNNTTC | 2 cut(s) | 587, 801 |
| XspI | CTAG | 4 cut(s) | 711, 800, 807, 1158 |