Carbamoyl-phosphate synthase large
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G29900 |
| fragaria_vesca | FvH4_1g25660 FvH4_1g25660 |
| malus_domestica | MD03G1111400.v1.1 MD11G1125100.v1.1 MD12G1166200.v1.1 |
| prunus_persica | Prupe.6G093800_v2.0.a1 |
| pyrus_communis | pycom11g10560 pycom11g10570 |
| rosa_chinensis | RchiOBHm_Chr2g0124141 RchiOBHm_Chr7g0219181 |
| rosa_laevigata | RLG00000002304 RLG00000018786 |
| rosa_multiflora | Rmu_co8484899.1_g000001 Rmu_sc0003840.1_g000003 Rmu_sc0008812.1_g000002 Rmu_sc0009785.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00120100 Rroxscaffold_3G00240170 |
| rosa_rugosa | Rorug02G0248800 Rorug07G0182900 Rorug07G0183000 Rorug07G0183000 |
| rosa_samantha | Rh2AG307800 Rh2BG316800 Rh2CG294600 Rh2DG331600 Rh2DG331800 Rh7AG326600 Rh7BG316400 Rh7CG343900 Rh7DG321900 |
| rosa_wichuraiana | Rw2G024810 Rw7G027510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 408 |
| Acc65I | GGTACC | 1 cut(s) | 1032 |
| AccB1I | GGYRCC | 1 cut(s) | 1032 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1736, 1948 |
| AciI | CCGC | 3 cut(s) | 451, 806, 1914 |
| AclI | AACGTT | 1 cut(s) | 1224 |
| AclWI | GGATC | 2 cut(s) | 599, 1933 |
| AcoI | YGGCCR | 2 cut(s) | 1069, 1933 |
| AcsI | RAATTY | 3 cut(s) | 473, 664, 1543 |
| AcuI | CTGAAG | 2 cut(s) | 617, 830 |
| AcyI | GRCGYC | 1 cut(s) | 405 |
| AdeI | CACNNNGTG | 1 cut(s) | 431 |
| AfaI | GTAC | 6 cut(s) | 500, 882, 895, 1034, 1456, 1651 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 980, 1078, 1736, 1948 |
| AflII | CTTAAG | 1 cut(s) | 266 |
| AflIII | ACRYGT | 3 cut(s) | 495, 877, 1570 |
| AjiI | CACGTC | 1 cut(s) | 742 |
| AjnI | CCWGG | 2 cut(s) | 989, 1612 |
| Alw21I | GWGCWC | 2 cut(s) | 1251, 1887 |
| Alw26I | GTCTC | 5 cut(s) | 412, 644, 822, 1410, 1533 |
| AlwI | GGATC | 2 cut(s) | 599, 1933 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1726 |
| Ama87I | CYCGRG | 1 cut(s) | 1430 |
| AoxI | GGCC | 7 cut(s) | 480, 1049, 1069, 1634, 1904, 1933, 2011 |
| ApeKI | GCWGC | 3 cut(s) | 191, 467, 1726 |
| ApoI | RAATTY | 3 cut(s) | 473, 664, 1543 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1590 |
| Asp718I | GGTACC | 1 cut(s) | 1032 |
| AspLEI | GCGC | 2 cut(s) | 28, 1149 |
| AspS9I | GGNCC | 4 cut(s) | 569, 1138, 1634, 2011 |
| AsuHPI | GGTGA | 5 cut(s) | 26, 891, 1289, 1672, 1979 |
| AvaI | CYCGRG | 1 cut(s) | 1430 |
| AvaII | GGWCC | 2 cut(s) | 569, 1138 |
| BalI | TGGCCA | 1 cut(s) | 1935 |
| BanI | GGYRCC | 1 cut(s) | 1032 |
| BauI | CACGAG | 1 cut(s) | 1443 |
| BbsI | GAAGAC | 1 cut(s) | 744 |
| Bbv12I | GWGCWC | 2 cut(s) | 1251, 1887 |
| BbvCI | CCTCAGC | 2 cut(s) | 921, 1751 |
| BbvI | GCAGC | 3 cut(s) | 178, 454, 1713 |
| BccI | CCATC | 7 cut(s) | 87, 448, 767, 1022, 1316, 1657, 1982 |
| BceAI | ACGGC | 2 cut(s) | 1919, 2009 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 986, 1020, 1187, 1221 |
| BciT130I | CCWGG | 2 cut(s) | 991, 1614 |
| BciVI | GTATCC | 3 cut(s) | 185, 451, 694 |
| BclI | TGATCA | 1 cut(s) | 1978 |
| BcoDI | GTCTC | 5 cut(s) | 412, 644, 822, 1410, 1533 |
| BfaI | CTAG | 5 cut(s) | 428, 839, 864, 1359, 2091 |
| BfmI | CTRYAG | 4 cut(s) | 468, 1713, 2064, 2114 |
| BfoI | RGCGCY | 2 cut(s) | 29, 1150 |
| BfrI | CTTAAG | 1 cut(s) | 266 |
| BfuI | GTATCC | 3 cut(s) | 185, 451, 694 |
| BisI | GCNGC | 4 cut(s) | 192, 468, 1727, 1914 |
| BlsI | GCNGC | 4 cut(s) | 193, 469, 1728, 1915 |
| BmcAI | AGTACT | 1 cut(s) | 1651 |
| Bme1390I | CCNGG | 2 cut(s) | 991, 1614 |
| Bme18I | GGWCC | 2 cut(s) | 569, 1138 |
| BmeT110I | CYCGRG | 1 cut(s) | 1430 |
| BmgBI | CACGTC | 1 cut(s) | 742 |
| BmgT120I | GGNCC | 4 cut(s) | 569, 1138, 1634, 2011 |
| BmiI | GGNNCC | 4 cut(s) | 254, 1034, 1140, 1635 |
| BmrFI | CCNGG | 2 cut(s) | 991, 1614 |
| BmrI | ACTGGG | 3 cut(s) | 133, 1031, 1662 |
| BmsI | GCATC | 7 cut(s) | 907, 994, 1168, 1189, 1495, 1632, 1960 |
| BmuI | ACTGGG | 3 cut(s) | 133, 1031, 1662 |
| BpiI | GAAGAC | 1 cut(s) | 744 |
| BpmI | CTGGAG | 2 cut(s) | 1284, 1434 |
| Bpu10I | CCTNAGC | 3 cut(s) | 921, 1020, 1751 |
| BsaHI | GRCGYC | 1 cut(s) | 405 |
| BsaJI | CCNNGG | 4 cut(s) | 1077, 1473, 1612, 1698 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 980, 1078, 1736, 1948 |
| Bse118I | RCCGGY | 1 cut(s) | 901 |
| Bse1I | ACTGG | 7 cut(s) | 128, 1037, 1657, 1741, 1871, 1942, 2030 |
| Bse3DI | GCAATG | 3 cut(s) | 201, 1686, 2159 |
| BseBI | CCWGG | 2 cut(s) | 991, 1614 |
| BseDI | CCNNGG | 4 cut(s) | 1077, 1473, 1612, 1698 |
| BseGI | GGATG | 7 cut(s) | 98, 334, 417, 1308, 1486, 1622, 2137 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 980, 1078, 1736, 1948 |
| BseMI | GCAATG | 3 cut(s) | 201, 1686, 2159 |
| BseMII | CTCAG | 6 cut(s) | 912, 1229, 1629, 1718, 1765, 1991 |
| BseNI | ACTGG | 7 cut(s) | 128, 1037, 1657, 1741, 1871, 1942, 2030 |
| BseRI | GAGGAG | 1 cut(s) | 2017 |
| BseXI | GCAGC | 3 cut(s) | 178, 454, 1713 |
| BseYI | CCCAGC | 3 cut(s) | 28, 1630, 2144 |
| BsgI | GTGCAG | 2 cut(s) | 806, 1551 |
| BshFI | GGCC | 7 cut(s) | 482, 1051, 1071, 1636, 1906, 1935, 2013 |
| BshNI | GGYRCC | 1 cut(s) | 1032 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1251, 1887 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1430 |
| BsiSI | CCGG | 3 cut(s) | 902, 1048, 2049 |
| BslFI | GGGAC | 4 cut(s) | 143, 1445, 1821, 1852 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 980, 1078, 1736, 1948 |
| BsmAI | GTCTC | 5 cut(s) | 412, 644, 822, 1410, 1533 |
| BsmBI | CGTCTC | 1 cut(s) | 1410 |
| BsmFI | GGGAC | 4 cut(s) | 143, 1445, 1821, 1852 |
| BsmI | GAATGC | 1 cut(s) | 1691 |
| BsnI | GGCC | 7 cut(s) | 482, 1051, 1071, 1636, 1906, 1935, 2013 |
| BsoBI | CYCGRG | 1 cut(s) | 1430 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1251, 1887 |
| Bsp143I | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| Bsp19I | CCATGG | 1 cut(s) | 1077 |
| BspACI | CCGC | 3 cut(s) | 451, 806, 1914 |
| BspANI | GGCC | 7 cut(s) | 482, 1051, 1071, 1636, 1906, 1935, 2013 |
| BspCNI | CTCAG | 6 cut(s) | 913, 1228, 1630, 1717, 1764, 1992 |
| BspHI | TCATGA | 3 cut(s) | 226, 1534, 1894 |
| BspLI | GGNNCC | 4 cut(s) | 254, 1034, 1140, 1635 |
| BspMAI | CTGCAG | 4 cut(s) | 472, 1717, 2068, 2118 |
| BspPI | GGATC | 2 cut(s) | 599, 1933 |
| BspT107I | GGYRCC | 1 cut(s) | 1032 |
| BspTI | CTTAAG | 1 cut(s) | 266 |
| BsrDI | GCAATG | 3 cut(s) | 201, 1686, 2159 |
| BsrFI | RCCGGY | 1 cut(s) | 901 |
| BsrI | ACTGG | 7 cut(s) | 128, 1037, 1657, 1741, 1871, 1942, 2030 |
| BssAI | RCCGGY | 1 cut(s) | 901 |
| BssECI | CCNNGG | 4 cut(s) | 1077, 1473, 1612, 1698 |
| BssMI | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| BssNI | GRCGYC | 1 cut(s) | 405 |
| BssSI | CACGAG | 1 cut(s) | 1443 |
| BssT1I | CCWWGG | 3 cut(s) | 1077, 1473, 1698 |
| Bst2BI | CACGAG | 1 cut(s) | 1443 |
| Bst2UI | CCWGG | 2 cut(s) | 991, 1614 |
| Bst4CI | ACNGT | 7 cut(s) | 608, 682, 710, 733, 1391, 1459, 1744 |
| Bst6I | CTCTTC | 5 cut(s) | 194, 410, 508, 825, 1536 |
| BstACI | GRCGYC | 1 cut(s) | 405 |
| BstAFI | CTTAAG | 1 cut(s) | 266 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1726 |
| BstC8I | GCNNGC | 1 cut(s) | 1288 |
| BstDEI | CTNAG | 7 cut(s) | 921, 1020, 1215, 1638, 1704, 1751, 2000 |
| BstDSI | CCRYGG | 1 cut(s) | 1077 |
| BstF5I | GGATG | 7 cut(s) | 98, 334, 417, 1308, 1486, 1622, 2137 |
| BstH2I | RGCGCY | 2 cut(s) | 29, 1150 |
| BstHHI | GCGC | 2 cut(s) | 28, 1149 |
| BstKTI | GATC | 6 cut(s) | 71, 594, 760, 1540, 1941, 1981 |
| BstMAI | GTCTC | 5 cut(s) | 412, 644, 822, 1410, 1533 |
| BstMBI | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 188, 271, 1502, 1642, 1726 |
| BstNI | CCWGG | 2 cut(s) | 991, 1614 |
| BstNSI | RCATGY | 3 cut(s) | 499, 881, 1574 |
| BstSCI | CCNGG | 2 cut(s) | 989, 1612 |
| BstSFI | CTRYAG | 4 cut(s) | 468, 1713, 2064, 2114 |
| BstV1I | GCAGC | 3 cut(s) | 178, 454, 1713 |
| BstV2I | GAAGAC | 1 cut(s) | 744 |
| BstX2I | RGATCY | 1 cut(s) | 1938 |
| BstYI | RGATCY | 1 cut(s) | 1938 |
| BsuI | GTATCC | 3 cut(s) | 185, 451, 694 |
| BsuRI | GGCC | 7 cut(s) | 482, 1051, 1071, 1636, 1906, 1935, 2013 |
| BtgI | CCRYGG | 1 cut(s) | 1077 |
| BtgZI | GCGATG | 1 cut(s) | 1000 |
| BtrI | CACGTC | 1 cut(s) | 742 |
| BtsCI | GGATG | 7 cut(s) | 98, 334, 417, 1308, 1486, 1622, 2137 |
| BtsI | GCAGTG | 1 cut(s) | 2111 |
| BtsIMutI | CAGTG | 5 cut(s) | 367, 725, 1740, 1878, 2111 |
| Cac8I | GCNNGC | 1 cut(s) | 1288 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1726 |
| CciI | TCATGA | 3 cut(s) | 226, 1534, 1894 |
| CfoI | GCGC | 2 cut(s) | 28, 1149 |
| Cfr10I | RCCGGY | 1 cut(s) | 901 |
| Cfr13I | GGNCC | 4 cut(s) | 569, 1138, 1634, 2011 |
| Csp6I | GTAC | 6 cut(s) | 499, 881, 894, 1033, 1455, 1650 |
| CviQI | GTAC | 6 cut(s) | 499, 881, 894, 1033, 1455, 1650 |
| DdeI | CTNAG | 7 cut(s) | 921, 1020, 1215, 1638, 1704, 1751, 2000 |
| DpnI | GATC | 6 cut(s) | 70, 593, 759, 1539, 1940, 1980 |
| DpnII | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| DraIII | CACNNNGTG | 1 cut(s) | 431 |
| EaeI | YGGCCR | 2 cut(s) | 1069, 1933 |
| Eam1104I | CTCTTC | 5 cut(s) | 194, 410, 508, 825, 1536 |
| EarI | CTCTTC | 5 cut(s) | 194, 410, 508, 825, 1536 |
| Eco130I | CCWWGG | 3 cut(s) | 1077, 1473, 1698 |
| Eco47I | GGWCC | 2 cut(s) | 569, 1138 |
| Eco57I | CTGAAG | 2 cut(s) | 617, 830 |
| Eco88I | CYCGRG | 1 cut(s) | 1430 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1634 |
| EcoRI | GAATTC | 1 cut(s) | 664 |
| EcoRII | CCWGG | 2 cut(s) | 989, 1612 |
| EcoT14I | CCWWGG | 3 cut(s) | 1077, 1473, 1698 |
| ErhI | CCWWGG | 3 cut(s) | 1077, 1473, 1698 |
| Esp3I | CGTCTC | 1 cut(s) | 1410 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1578, 1610 |
| FaqI | GGGAC | 4 cut(s) | 143, 1445, 1821, 1852 |
| FauI | CCCGC | 1 cut(s) | 444 |
| FbaI | TGATCA | 1 cut(s) | 1978 |
| Fnu4HI | GCNGC | 4 cut(s) | 192, 468, 1727, 1914 |
| FokI | GGATG | 7 cut(s) | 105, 341, 424, 1295, 1473, 1629, 2144 |
| Fsp4HI | GCNGC | 4 cut(s) | 192, 468, 1727, 1914 |
| FspBI | CTAG | 5 cut(s) | 428, 839, 864, 1359, 2091 |
| GlaI | GCGC | 2 cut(s) | 27, 1148 |
| GluI | GCNGC | 4 cut(s) | 192, 468, 1727, 1914 |
| GsaI | CCCAGC | 3 cut(s) | 32, 1634, 2148 |
| GsuI | CTGGAG | 2 cut(s) | 1284, 1434 |
| HaeII | RGCGCY | 2 cut(s) | 29, 1150 |
| HaeIII | GGCC | 7 cut(s) | 482, 1051, 1071, 1636, 1906, 1935, 2013 |
| HapII | CCGG | 3 cut(s) | 902, 1048, 2049 |
| HhaI | GCGC | 2 cut(s) | 28, 1149 |
| Hin1I | GRCGYC | 1 cut(s) | 405 |
| Hin6I | GCGC | 2 cut(s) | 26, 1147 |
| HinP1I | GCGC | 2 cut(s) | 26, 1147 |
| HincII | GTYRAC | 1 cut(s) | 2061 |
| HindII | GTYRAC | 1 cut(s) | 2061 |
| HpaII | CCGG | 3 cut(s) | 902, 1048, 2049 |
| HphI | GGTGA | 5 cut(s) | 26, 891, 1289, 1672, 1979 |
| Hpy166II | GTNNAC | 2 cut(s) | 1138, 2061 |
| Hpy188I | TCNGA | 9 cut(s) | 57, 155, 316, 397, 636, 1177, 1707, 1983, 2186 |
| Hpy8I | GTNNAC | 2 cut(s) | 1138, 2061 |
| HpyAV | CCTTC | 5 cut(s) | 205, 305, 541, 1062, 1892 |
| HpyCH4III | ACNGT | 7 cut(s) | 608, 682, 710, 733, 1391, 1459, 1744 |
| HpyCH4IV | ACGT | 6 cut(s) | 38, 405, 620, 741, 1224, 1419 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 188, 271, 1502, 1642, 1726 |
| HpyF3I | CTNAG | 7 cut(s) | 921, 1020, 1215, 1638, 1704, 1751, 2000 |
| HpySE526I | ACGT | 6 cut(s) | 38, 405, 620, 741, 1224, 1419 |
| Hsp92I | GRCGYC | 1 cut(s) | 405 |
| HspAI | GCGC | 2 cut(s) | 26, 1147 |
| KpnI | GGTACC | 1 cut(s) | 1036 |
| Ksp22I | TGATCA | 1 cut(s) | 1978 |
| Kzo9I | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| LmnI | GCTCC | 8 cut(s) | 115, 271, 286, 442, 535, 993, 1246, 2051 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 454, 1713 |
| LweI | GCATC | 7 cut(s) | 907, 994, 1168, 1189, 1495, 1632, 1960 |
| MaeI | CTAG | 5 cut(s) | 428, 839, 864, 1359, 2091 |
| MaeII | ACGT | 6 cut(s) | 38, 405, 620, 741, 1224, 1419 |
| MaeIII | GTNAC | 4 cut(s) | 362, 704, 1277, 2170 |
| MalI | GATC | 6 cut(s) | 70, 593, 759, 1539, 1940, 1980 |
| MboI | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| MboII | GAAGA | 7 cut(s) | 211, 427, 495, 749, 812, 1523, 1586 |
| MfeI | CAATTG | 1 cut(s) | 137 |
| MflI | RGATCY | 1 cut(s) | 1938 |
| MhlI | GDGCHC | 2 cut(s) | 1251, 1887 |
| MlsI | TGGCCA | 1 cut(s) | 1935 |
| MluNI | TGGCCA | 1 cut(s) | 1935 |
| MlyI | GAGTC | 6 cut(s) | 26, 56, 165, 1205, 1274, 1275 |
| MmeI | TCCRAC | 1 cut(s) | 1322 |
| Mox20I | TGGCCA | 1 cut(s) | 1935 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1590 |
| MscI | TGGCCA | 1 cut(s) | 1935 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1275 |
| Msp20I | TGGCCA | 1 cut(s) | 1935 |
| MspA1I | CMGCKG | 2 cut(s) | 808, 1916 |
| MspCI | CTTAAG | 1 cut(s) | 266 |
| MspI | CCGG | 3 cut(s) | 902, 1048, 2049 |
| MspR9I | CCNGG | 2 cut(s) | 991, 1614 |
| MunI | CAATTG | 1 cut(s) | 137 |
| Mva1269I | GAATGC | 1 cut(s) | 1691 |
| MvaI | CCWGG | 2 cut(s) | 991, 1614 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 188, 271, 1502, 1642, 1726 |
| NcoI | CCATGG | 1 cut(s) | 1077 |
| NdeII | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| NlaIV | GGNNCC | 4 cut(s) | 254, 1034, 1140, 1635 |
| NmeAIII | GCCGAG | 1 cut(s) | 1097 |
| NmuCI | GTSAC | 4 cut(s) | 362, 704, 1277, 2170 |
| NspI | RCATGY | 3 cut(s) | 499, 881, 1574 |
| PaeR7I | CTCGAG | 1 cut(s) | 1430 |
| PagI | TCATGA | 3 cut(s) | 226, 1534, 1894 |
| PciI | ACATGT | 3 cut(s) | 495, 877, 1570 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1450 |
| PctI | GAATGC | 1 cut(s) | 1691 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1590 |
| PfeI | GAWTC | 4 cut(s) | 524, 579, 1294, 2026 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1736, 1948 |
| PkrI | GCNGC | 4 cut(s) | 193, 469, 1728, 1915 |
| PleI | GAGTC | 6 cut(s) | 25, 55, 164, 1205, 1274, 1274 |
| PpsI | GAGTC | 6 cut(s) | 25, 55, 164, 1205, 1274, 1274 |
| PscI | ACATGT | 3 cut(s) | 495, 877, 1570 |
| Psp1406I | AACGTT | 1 cut(s) | 1224 |
| Psp6I | CCWGG | 2 cut(s) | 989, 1612 |
| PspFI | CCCAGC | 3 cut(s) | 28, 1630, 2144 |
| PspGI | CCWGG | 2 cut(s) | 989, 1612 |
| PspN4I | GGNNCC | 4 cut(s) | 254, 1034, 1140, 1635 |
| PspPI | GGNCC | 4 cut(s) | 569, 1138, 1634, 2011 |
| PspXI | VCTCGAGB | 1 cut(s) | 1430 |
| PstI | CTGCAG | 4 cut(s) | 472, 1717, 2068, 2118 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1726 |
| PsuI | RGATCY | 1 cut(s) | 1938 |
| RsaI | GTAC | 6 cut(s) | 500, 882, 895, 1034, 1456, 1651 |
| RsaNI | GTAC | 6 cut(s) | 499, 881, 894, 1033, 1455, 1650 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1275 |
| SatI | GCNGC | 4 cut(s) | 192, 468, 1727, 1914 |
| Sau3AI | GATC | 6 cut(s) | 68, 591, 757, 1537, 1938, 1978 |
| Sau96I | GGNCC | 4 cut(s) | 569, 1138, 1634, 2011 |
| ScaI | AGTACT | 1 cut(s) | 1651 |
| SchI | GAGTC | 6 cut(s) | 26, 56, 165, 1205, 1274, 1275 |
| ScrFI | CCNGG | 2 cut(s) | 991, 1614 |
| SduI | GDGCHC | 2 cut(s) | 1251, 1887 |
| SfaNI | GCATC | 7 cut(s) | 907, 994, 1168, 1189, 1495, 1632, 1960 |
| SfcI | CTRYAG | 4 cut(s) | 468, 1713, 2064, 2114 |
| Sfr274I | CTCGAG | 1 cut(s) | 1430 |
| SinI | GGWCC | 2 cut(s) | 569, 1138 |
| SlaI | CTCGAG | 1 cut(s) | 1430 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1275 |
| SmlI | CTYRAG | 2 cut(s) | 266, 1430 |
| SmoI | CTYRAG | 2 cut(s) | 266, 1430 |
| SsiI | CCGC | 3 cut(s) | 451, 806, 1914 |
| SspMI | CTAG | 5 cut(s) | 428, 839, 864, 1359, 2091 |
| StyD4I | CCNGG | 2 cut(s) | 989, 1612 |
| StyI | CCWWGG | 3 cut(s) | 1077, 1473, 1698 |
| TaaI | ACNGT | 7 cut(s) | 608, 682, 710, 733, 1391, 1459, 1744 |
| TaiI | ACGT | 6 cut(s) | 41, 408, 623, 744, 1227, 1422 |
| TaqII | GACCGA | 1 cut(s) | 572 |
| TatI | WGTACW | 2 cut(s) | 498, 1649 |
| TauI | GCSGC | 1 cut(s) | 1916 |
| TfiI | GAWTC | 4 cut(s) | 524, 579, 1294, 2026 |
| TscAI | CASTG | 5 cut(s) | 367, 732, 1747, 1878, 2118 |
| TseFI | GTSAC | 4 cut(s) | 362, 704, 1277, 2170 |
| TseI | GCWGC | 3 cut(s) | 191, 467, 1726 |
| Tsp45I | GTSAC | 4 cut(s) | 362, 704, 1277, 2170 |
| TspRI | CASTG | 5 cut(s) | 367, 732, 1747, 1878, 2118 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1736, 1948 |
| Vha464I | CTTAAG | 1 cut(s) | 266 |
| VpaK11BI | GGWCC | 2 cut(s) | 569, 1138 |
| XapI | RAATTY | 3 cut(s) | 473, 664, 1543 |
| XbaI | TCTAGA | 1 cut(s) | 838 |
| XceI | RCATGY | 3 cut(s) | 499, 881, 1574 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1801 |
| XhoI | CTCGAG | 1 cut(s) | 1430 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1590 |
| XspI | CTAG | 5 cut(s) | 428, 839, 864, 1359, 2091 |
| ZraI | GACGTC | 1 cut(s) | 406 |
| ZrmI | AGTACT | 1 cut(s) | 1651 |