Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8484899.1

Orthogroup ID

OG0003802

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 2322

Gene Structure 2322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8484899.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1912 bp

atgaaaaggactctgtctttgaagcagccgccgattttggctcagtccaaaccctcctcctattcgtcgaaaccgaacaacttccgcttcctatactccaagaagctcggcgccctaccgtcgctcagcctccggtcatggccgcagtcgcagagtcatcgtccgagttgccgagtcaactcggttcggagcgagtcgttgtccgacggcggcgtggcggagaagaaagaagaagcgaaggcggcgaaggcgccggggaaggtggggaagaggacggacttgaagaagattatgatactgggcgccgggccgattgtgatcgggcaagcttgcgagttcgattactcggggactcaagcttgtaaagctttgaaggaggaaggatacgaggtcgttttgatcaattccaacccggctacgatcatgaccgacccggatttggccgataggacctacattacgccgatgactccggaattggtggagcaggtgcttgaaaaggagcggccggacgctcttttgccgaccatgggaggccagacggcgttgaacctggcggtggcgttggccgaaagcggtgcgctggagaagtatggtgtggagttgattggtgctaagctggaggccattaagaaagctgaggatagagagctgttcaagcaggcgatgaagaacattggggttgaaacgccgccgtctggaattgccaacaccttggaggaatgtgtggaaattgcgaaagagattggtgagtttcccttgatcattaggccagcttttacgttgggagggacgggaggtggtattgcatataataaggaggaatttgagactatttgtaaggctgggctggcggcgagtttgacctctcaggttttggtggagaagtcactgttagggtggaaggaatatgagcttgaggtgatgagggacttggcagataatgttgttattatttgctccattgagaatatggacccgatgggggttcatacgggagactctatcaccgtggcgcctgctcagactttaactgataaggagtatcagcggctgagggactattcgatagctataataagagagattggagtggaatgtggtggttctaatgtgcagtttgctgtgaatcctcaagacggggaggttatggtgattgagatgaatccaagggtgtcacggtcctcggctctggcatccaaagcaactggttttccgatagcgaaaatggctgctaggttgtcagttggatattccttggatcaaattcccaatgacattacaaagaagacaccggctagttttgagccttccatagactatgtggtaacaaagattccccggtttgcttttgaaaagtttcctggttcagagccaatactgacgacccagatgaaatctgtcggtgagtcaatggcactagggcgtacatttcaagaatcctttcagaaagcagttcggtctttggaatgtggtttctctggatggggctgtgggaaaattaaggaactagactgggattgggagcaattgaaatatagtctccgagtccctaacccagatcgtatccatgctgtgtatgctgcaatgaagaagggaatgaagatagatgaaattcatgagctgagtttcattgacaaatggttcctcacacagcttaaagaattggtggatgtagagcaattcctcctggctagaaacttgtctgatctaacaaaggatgacttctatgaagtgaaaagaagaggcttcagtgacaaacaaatagcttttgccactaaatcctctgaaaatgaagtgcggttgaagagattatcattgggtgtcactccagcatataagcgggtagatacgtgtgccgcagagtttgaggccaatactccttatatgtactcgtcttatgactttgagt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000050 GO:0003674 GO:0003824 GO:0004087 GO:0004088 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005951 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016053 GO:0016874 GO:0016879 GO:0016884 GO:0019627 GO:0019752 GO:0031667 GO:0031668 GO:0031669 GO:0032991 GO:0033554 GO:0034641 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050896 GO:0051716 GO:0071496 GO:0071704 GO:0071941 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00240 ko00250 ko01100 map00240 map00250 map01100

Pfam Domains

Protein Families

CPSase_L_D2 CPSase_L_D3 MGS

Protein Analysis

637

Amino Acids

70.36

Weight (kDa)

5.83

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29900
fragaria_vesca	FvH4_1g25660 FvH4_1g25660
malus_domestica	MD03G1111400.v1.1 MD11G1125100.v1.1 MD12G1166200.v1.1
prunus_persica	Prupe.6G093800_v2.0.a1
pyrus_communis	pycom11g10560 pycom11g10570
rosa_chinensis	RchiOBHm_Chr2g0124141 RchiOBHm_Chr7g0219181
rosa_laevigata	RLG00000002304 RLG00000018786
rosa_multiflora	Rmu_co8484899.1_g000001 Rmu_sc0003840.1_g000003 Rmu_sc0008812.1_g000002 Rmu_sc0009785.1_g000029
rosa_roxburghii	Rroxscaffold_2G00120100 Rroxscaffold_3G00240170
rosa_rugosa	Rorug02G0248800 Rorug07G0182900 Rorug07G0183000 Rorug07G0183000
rosa_samantha	Rh2AG307800 Rh2BG316800 Rh2CG294600 Rh2DG331600 Rh2DG331800 Rh7AG326600 Rh7BG316400 Rh7CG343900 Rh7DG321900
rosa_wichuraiana	Rw2G024810 Rw7G027510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	478
Acc36I	ACCTGC	1 cut(s)	478
AccB1I	GGYRCC	4 cut(s)	110, 250, 302, 1015
AccBSI	CCGCTC	1 cut(s)	505
AccIII	TCCGGA	1 cut(s)	472
AclWI	GGATC	1 cut(s)	1269
AcoI	YGGCCR	4 cut(s)	140, 441, 506, 567
AcsI	RAATTY	3 cut(s)	824, 1266, 1614
AcuI	CTGAAG	1 cut(s)	1735
AcyI	GRCGYC	4 cut(s)	111, 251, 303, 1016
AfaI	GTAC	2 cut(s)	1429, 1892
AfiI	CCNNNNNNNGG	6 cut(s)	439, 530, 559, 698, 985, 1139
AflIII	ACRYGT	1 cut(s)	1853
AjnI	CCWGG	3 cut(s)	552, 1363, 1689
Alw26I	GTCTC	3 cut(s)	824, 993, 1547
AlwI	GGATC	1 cut(s)	1269
AlwNI	CAGNNNCTG	1 cut(s)	1054
Ama87I	CYCGRG	1 cut(s)	346
Aor13HI	TCCGGA	1 cut(s)	472
AoxI	GGCC	9 cut(s)	140, 308, 441, 506, 535, 567, 624, 770, 1872
ApeKI	GCWGC	3 cut(s)	25, 1232, 1583
ApoI	RAATTY	3 cut(s)	824, 1266, 1614
ArsI	GACNNNNNNTTYG	1 cut(s)	33
Asp700I	GAANNNNTTC	3 cut(s)	80, 1359, 1443
AspLEI	GCGC	5 cut(s)	113, 253, 305, 583, 1018
AspS9I	GGNCC	4 cut(s)	308, 450, 976, 1182
AsuC2I	CCSGG	5 cut(s)	255, 307, 413, 434, 1342
AsuHPI	GGTGA	5 cut(s)	761, 934, 1000, 1165, 1418
AvaI	CYCGRG	1 cut(s)	346
AvaII	GGWCC	3 cut(s)	450, 976, 1182
BanI	GGYRCC	4 cut(s)	110, 250, 302, 1015
BbsI	GAAGAC	1 cut(s)	1295
BbvCI	CCTCAGC	2 cut(s)	639, 1055
BbvI	GCAGC	3 cut(s)	37, 1219, 1570
BccI	CCATC	2 cut(s)	976, 1479
BceAI	ACGGC	3 cut(s)	223, 558, 679
BcgI	CGANNNNNNTGC	4 cut(s)	140, 174, 560, 594
BciT130I	CCWGG	3 cut(s)	554, 1365, 1691
BciVI	GTATCC	2 cut(s)	377, 1577
BclI	TGATCA	2 cut(s)	399, 762
BcnI	CCSGG	5 cut(s)	255, 307, 413, 434, 1342
BcoDI	GTCTC	3 cut(s)	824, 993, 1547
BfaI	CTAG	5 cut(s)	1236, 1299, 1421, 1511, 1695
BfoI	RGCGCY	4 cut(s)	114, 254, 306, 1019
BfuAI	ACCTGC	1 cut(s)	478
BfuI	GTATCC	2 cut(s)	377, 1577
BlpI	GCTNAGC	2 cut(s)	125, 615
Bme1390I	CCNGG	8 cut(s)	255, 307, 413, 434, 554, 1342, 1365, 1691
Bme18I	GGWCC	3 cut(s)	450, 976, 1182
BmeT110I	CYCGRG	1 cut(s)	346
BmgT120I	GGNCC	4 cut(s)	308, 450, 976, 1182
BmiI	GGNNCC	6 cut(s)	112, 252, 304, 978, 1017, 1646
BmrFI	CCNGG	8 cut(s)	255, 307, 413, 434, 554, 1342, 1365, 1691
BmrI	ACTGGG	2 cut(s)	308, 1525
BmsI	GCATC	1 cut(s)	1205
BmuI	ACTGGG	2 cut(s)	308, 1525
BpiI	GAAGAC	1 cut(s)	1295
BpmI	CTGGAG	3 cut(s)	605, 641, 1815
Bpu10I	CCTNAGC	2 cut(s)	639, 1055
Bpu1102I	GCTNAGC	2 cut(s)	125, 615
BpuEI	CTTGAG	3 cut(s)	339, 938, 1119
BpuMI	CCSGG	5 cut(s)	255, 307, 413, 434, 1342
BsaAI	YACGTR	1 cut(s)	1854
BsaBI	GATNNNNATC	1 cut(s)	317
BsaHI	GRCGYC	4 cut(s)	111, 251, 303, 1016
BsaJI	CCNNGG	8 cut(s)	254, 528, 714, 1011, 1169, 1185, 1257, 1340
BsaWI	WCCGGW	2 cut(s)	132, 472
Bsc4I	CCNNNNNNNGG	6 cut(s)	439, 530, 559, 698, 985, 1139
Bse118I	RCCGGY	1 cut(s)	1294
Bse1I	ACTGG	3 cut(s)	303, 1213, 1520
Bse3DI	GCAATG	1 cut(s)	1593
Bse8I	GATNNNNATC	1 cut(s)	317
BseAI	TCCGGA	1 cut(s)	472
BseBI	CCWGG	3 cut(s)	554, 1365, 1691
BseDI	CCNNGG	8 cut(s)	254, 528, 714, 1011, 1169, 1185, 1257, 1340
BseGI	GGATG	4 cut(s)	1196, 1490, 1678, 1726
BseJI	GATNNNNATC	1 cut(s)	317
BseLI	CCNNNNNNNGG	6 cut(s)	439, 530, 559, 698, 985, 1139
BseMI	GCAATG	1 cut(s)	1593
BseMII	CTCAG	7 cut(s)	56, 139, 630, 884, 1037, 1046, 1616
BseNI	ACTGG	3 cut(s)	303, 1213, 1520
BseRI	GAGGAG	1 cut(s)	46
BseX3I	CGGCCG	1 cut(s)	506
BseXI	GCAGC	3 cut(s)	37, 1219, 1570
BseYI	CCCAGC	1 cut(s)	845
BsgI	GTGCAG	1 cut(s)	1136
Bsh1285I	CGRYCG	1 cut(s)	509
BshFI	GGCC	9 cut(s)	142, 310, 443, 508, 537, 569, 626, 772, 1874
BshNI	GGYRCC	4 cut(s)	110, 250, 302, 1015
BsiEI	CGRYCG	1 cut(s)	509
BsiHKCI	CYCGRG	1 cut(s)	346
BsiSI	CCGG	9 cut(s)	133, 254, 306, 413, 434, 473, 509, 1295, 1342
BslFI	GGGAC	5 cut(s)	364, 805, 944, 1073, 1535
BslI	CCNNNNNNNGG	6 cut(s)	439, 530, 559, 698, 985, 1139
BsmAI	GTCTC	3 cut(s)	824, 993, 1547
BsmFI	GGGAC	5 cut(s)	364, 805, 944, 1073, 1535
BsnI	GGCC	9 cut(s)	142, 310, 443, 508, 537, 569, 626, 772, 1874
BsoBI	CYCGRG	1 cut(s)	346
Bsp13I	TCCGGA	1 cut(s)	472
Bsp143I	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
Bsp1720I	GCTNAGC	2 cut(s)	125, 615
Bsp19I	CCATGG	1 cut(s)	528
BspANI	GGCC	9 cut(s)	142, 310, 443, 508, 537, 569, 626, 772, 1874
BspCNI	CTCAG	7 cut(s)	55, 138, 631, 883, 1036, 1047, 1617
BspEI	TCCGGA	1 cut(s)	472
BspHI	TCATGA	2 cut(s)	423, 1618
BspLI	GGNNCC	6 cut(s)	112, 252, 304, 978, 1017, 1646
BspMI	ACCTGC	1 cut(s)	478
BspPI	GGATC	1 cut(s)	1269
BspT107I	GGYRCC	4 cut(s)	110, 250, 302, 1015
BsrBI	CCGCTC	1 cut(s)	505
BsrDI	GCAATG	1 cut(s)	1593
BsrFI	RCCGGY	1 cut(s)	1294
BsrI	ACTGG	3 cut(s)	303, 1213, 1520
BssAI	RCCGGY	1 cut(s)	1294
BssECI	CCNNGG	8 cut(s)	254, 528, 714, 1011, 1169, 1185, 1257, 1340
BssMI	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
BssNI	GRCGYC	4 cut(s)	111, 251, 303, 1016
BssT1I	CCWWGG	4 cut(s)	528, 714, 1169, 1257
Bst2UI	CCWGG	3 cut(s)	554, 1365, 1691
Bst4CI	ACNGT	4 cut(s)	120, 894, 1012, 1182
Bst6I	CTCTTC	3 cut(s)	263, 1738, 1802
BstACI	GRCGYC	4 cut(s)	111, 251, 303, 1016
BstBAI	YACGTR	1 cut(s)	1854
BstC8I	GCNNGC	6 cut(s)	327, 331, 663, 774, 852, 1020
BstDEI	CTNAG	8 cut(s)	42, 125, 615, 639, 870, 1023, 1055, 1625
BstDSI	CCRYGG	2 cut(s)	528, 1011
BstF5I	GGATG	4 cut(s)	1196, 1490, 1678, 1726
BstH2I	RGCGCY	4 cut(s)	114, 254, 306, 1019
BstHHI	GCGC	5 cut(s)	113, 253, 305, 583, 1018
BstKTI	GATC	7 cut(s)	321, 402, 423, 765, 1264, 1564, 1711
BstMAI	GTCTC	3 cut(s)	824, 993, 1547
BstMBI	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
BstMCI	CGRYCG	1 cut(s)	509
BstMWI	GCNNNNNNNGC	9 cut(s)	148, 242, 248, 365, 658, 851, 1202, 1229, 1580
BstNI	CCWGG	3 cut(s)	554, 1365, 1691
BstSCI	CCNGG	8 cut(s)	253, 305, 411, 432, 552, 1340, 1363, 1689
BstV1I	GCAGC	3 cut(s)	37, 1219, 1570
BstV2I	GAAGAC	1 cut(s)	1295
BstXI	CCANNNNNNTGG	1 cut(s)	715
BstZI	CGGCCG	1 cut(s)	506
BsuI	GTATCC	2 cut(s)	377, 1577
BsuRI	GGCC	9 cut(s)	142, 310, 443, 508, 537, 569, 626, 772, 1874
BtgI	CCRYGG	2 cut(s)	528, 1011
BtgZI	GCGATG	1 cut(s)	680
BtsCI	GGATG	4 cut(s)	1196, 1490, 1678, 1726
BtsIMutI	CAGTG	2 cut(s)	890, 1759
BveI	ACCTGC	1 cut(s)	478
Cac8I	GCNNGC	6 cut(s)	327, 331, 663, 774, 852, 1020
CaiI	CAGNNNCTG	1 cut(s)	1054
CciI	TCATGA	2 cut(s)	423, 1618
CfoI	GCGC	5 cut(s)	113, 253, 305, 583, 1018
Cfr10I	RCCGGY	1 cut(s)	1294
Cfr13I	GGNCC	4 cut(s)	308, 450, 976, 1182
CseI	GACGC	1 cut(s)	521
Csp6I	GTAC	2 cut(s)	1428, 1891
CviAII	CATG	5 cut(s)	138, 424, 529, 1571, 1619
CviQI	GTAC	2 cut(s)	1428, 1891
DdeI	CTNAG	8 cut(s)	42, 125, 615, 639, 870, 1023, 1055, 1625
DinI	GGCGCC	4 cut(s)	112, 252, 304, 1017
DpnI	GATC	7 cut(s)	320, 401, 422, 764, 1263, 1563, 1710
DpnII	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
EaeI	YGGCCR	4 cut(s)	140, 441, 506, 567
EagI	CGGCCG	1 cut(s)	506
Eam1104I	CTCTTC	3 cut(s)	263, 1738, 1802
EarI	CTCTTC	3 cut(s)	263, 1738, 1802
EciI	GGCGGA	1 cut(s)	233
EclXI	CGGCCG	1 cut(s)	506
Eco130I	CCWWGG	4 cut(s)	528, 714, 1169, 1257
Eco47I	GGWCC	3 cut(s)	450, 976, 1182
Eco52I	CGGCCG	1 cut(s)	506
Eco57I	CTGAAG	1 cut(s)	1735
Eco88I	CYCGRG	1 cut(s)	346
EcoO109I	RGGNCCY	1 cut(s)	450
EcoRII	CCWGG	3 cut(s)	552, 1363, 1689
EcoT14I	CCWWGG	4 cut(s)	528, 714, 1169, 1257
EgeI	GGCGCC	4 cut(s)	112, 252, 304, 1017
EheI	GGCGCC	4 cut(s)	112, 252, 304, 1017
ErhI	CCWWGG	4 cut(s)	528, 714, 1169, 1257
FaeI	CATG	5 cut(s)	141, 427, 532, 1574, 1622
FalI	AAGNNNNNCTT	2 cut(s)	1709, 1741
FaqI	GGGAC	5 cut(s)	364, 805, 944, 1073, 1535
FatI	CATG	5 cut(s)	137, 423, 528, 1570, 1618
FauI	CCCGC	1 cut(s)	1836
FbaI	TGATCA	2 cut(s)	399, 762
FokI	GGATG	4 cut(s)	1183, 1497, 1685, 1733
FspBI	CTAG	5 cut(s)	1236, 1299, 1421, 1511, 1695
GlaI	GCGC	5 cut(s)	112, 252, 304, 582, 1017
GsaI	CCCAGC	1 cut(s)	849
GsuI	CTGGAG	3 cut(s)	605, 641, 1815
HaeII	RGCGCY	4 cut(s)	114, 254, 306, 1019
HaeIII	GGCC	9 cut(s)	142, 310, 443, 508, 537, 569, 626, 772, 1874
HapII	CCGG	9 cut(s)	133, 254, 306, 413, 434, 473, 509, 1295, 1342
HgaI	GACGC	1 cut(s)	521
HhaI	GCGC	5 cut(s)	113, 253, 305, 583, 1018
Hin1I	GRCGYC	4 cut(s)	111, 251, 303, 1016
Hin1II	CATG	5 cut(s)	141, 427, 532, 1574, 1622
Hin6I	GCGC	5 cut(s)	111, 251, 303, 581, 1016
HinP1I	GCGC	5 cut(s)	111, 251, 303, 581, 1016
HincII	GTYRAC	1 cut(s)	178
HindII	GTYRAC	1 cut(s)	178
HindIII	AAGCTT	3 cut(s)	327, 357, 366
HpaII	CCGG	9 cut(s)	133, 254, 306, 413, 434, 473, 509, 1295, 1342
HphI	GGTGA	5 cut(s)	761, 934, 1000, 1165, 1418
Hpy166II	GTNNAC	1 cut(s)	178
Hpy188III	TCNNGA	7 cut(s)	424, 473, 699, 1136, 1436, 1482, 1619
Hpy8I	GTNNAC	1 cut(s)	178
Hpy99I	CGWCG	3 cut(s)	70, 124, 209
HpyAV	CCTTC	8 cut(s)	232, 241, 253, 367, 374, 898, 1320, 1588
HpyCH4III	ACNGT	4 cut(s)	120, 894, 1012, 1182
HpyCH4IV	ACGT	2 cut(s)	782, 1853
HpyCH4V	TGCA	3 cut(s)	809, 1117, 1586
HpyF10VI	GCNNNNNNNGC	9 cut(s)	148, 242, 248, 365, 658, 851, 1202, 1229, 1580
HpyF3I	CTNAG	8 cut(s)	42, 125, 615, 639, 870, 1023, 1055, 1625
HpySE526I	ACGT	2 cut(s)	782, 1853
Hsp92I	GRCGYC	4 cut(s)	111, 251, 303, 1016
Hsp92II	CATG	5 cut(s)	141, 427, 532, 1574, 1622
HspAI	GCGC	5 cut(s)	111, 251, 303, 581, 1016
KasI	GGCGCC	4 cut(s)	110, 250, 302, 1015
Kpn2I	TCCGGA	1 cut(s)	472
Ksp22I	TGATCA	2 cut(s)	399, 762
Kzo9I	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
LmnI	GCTCC	5 cut(s)	189, 484, 502, 965, 1525
Lsp1109I	GCAGC	3 cut(s)	37, 1219, 1570
LweI	GCATC	1 cut(s)	1205
MaeI	CTAG	5 cut(s)	1236, 1299, 1421, 1511, 1695
MaeII	ACGT	2 cut(s)	782, 1853
MaeIII	GTNAC	5 cut(s)	888, 1176, 1327, 1754, 1825
MalI	GATC	7 cut(s)	320, 401, 422, 764, 1263, 1563, 1710
MbiI	CCGCTC	1 cut(s)	505
MboI	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
MfeI	CAATTG	1 cut(s)	1529
Mly113I	GGCGCC	4 cut(s)	111, 251, 303, 1016
MlyI	GAGTC	9 cut(s)	4, 163, 183, 203, 346, 463, 995, 1418, 1557
MmeI	TCCRAC	3 cut(s)	228, 432, 1228
MroI	TCCGGA	1 cut(s)	472
MroXI	GAANNNNTTC	3 cut(s)	80, 1359, 1443
MseI	TTAA	4 cut(s)	630, 1031, 1503, 1659
MspA1I	CMGCKG	1 cut(s)	1051
MspI	CCGG	9 cut(s)	133, 254, 306, 413, 434, 473, 509, 1295, 1342
MspR9I	CCNGG	8 cut(s)	255, 307, 413, 434, 554, 1342, 1365, 1691
MunI	CAATTG	1 cut(s)	1529
MvaI	CCWGG	3 cut(s)	554, 1365, 1691
MwoI	GCNNNNNNNGC	9 cut(s)	148, 242, 248, 365, 658, 851, 1202, 1229, 1580
NarI	GGCGCC	4 cut(s)	111, 251, 303, 1016
NciI	CCSGG	5 cut(s)	255, 307, 413, 434, 1342
NcoI	CCATGG	1 cut(s)	528
NdeII	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
NlaIII	CATG	5 cut(s)	141, 427, 532, 1574, 1622
NlaIV	GGNNCC	6 cut(s)	112, 252, 304, 978, 1017, 1646
NmeAIII	GCCGAG	3 cut(s)	87, 197, 1166
NmuCI	GTSAC	4 cut(s)	888, 1176, 1754, 1825
PagI	TCATGA	2 cut(s)	423, 1618
PaqCI	CACCTGC	1 cut(s)	478
PcsI	WCGNNNNNNNCGW	1 cut(s)	71
PdmI	GAANNNNTTC	3 cut(s)	80, 1359, 1443
PfeI	GAWTC	4 cut(s)	1129, 1165, 1336, 1439
PflFI	GACNNNGTC	1 cut(s)	13
PleI	GAGTC	9 cut(s)	4, 162, 182, 202, 346, 463, 995, 1417, 1556
PluTI	GGCGCC	4 cut(s)	114, 254, 306, 1019
PpsI	GAGTC	9 cut(s)	4, 162, 182, 202, 346, 463, 995, 1417, 1556
Ppu21I	YACGTR	1 cut(s)	1854
PpuMI	RGGWCCY	1 cut(s)	450
Psp5II	RGGWCCY	1 cut(s)	450
Psp6I	CCWGG	3 cut(s)	552, 1363, 1689
PspFI	CCCAGC	1 cut(s)	845
PspGI	CCWGG	3 cut(s)	552, 1363, 1689
PspN4I	GGNNCC	6 cut(s)	112, 252, 304, 978, 1017, 1646
PspPI	GGNCC	4 cut(s)	308, 450, 976, 1182
PspPPI	RGGWCCY	1 cut(s)	450
PstNI	CAGNNNCTG	1 cut(s)	1054
PsyI	GACNNNGTC	1 cut(s)	13
RsaI	GTAC	2 cut(s)	1429, 1892
RsaNI	GTAC	2 cut(s)	1428, 1891
SaqAI	TTAA	4 cut(s)	630, 1031, 1503, 1659
Sau3AI	GATC	7 cut(s)	318, 399, 420, 762, 1261, 1561, 1708
Sau96I	GGNCC	4 cut(s)	308, 450, 976, 1182
SchI	GAGTC	9 cut(s)	4, 163, 183, 203, 346, 463, 995, 1418, 1557
ScrFI	CCNGG	8 cut(s)	255, 307, 413, 434, 554, 1342, 1365, 1691
SfaNI	GCATC	1 cut(s)	1205
SfoI	GGCGCC	4 cut(s)	112, 252, 304, 1017
SinI	GGWCC	3 cut(s)	450, 976, 1182
SmlI	CTYRAG	3 cut(s)	354, 917, 1134
SmoI	CTYRAG	3 cut(s)	354, 917, 1134
SspDI	GGCGCC	4 cut(s)	110, 250, 302, 1015
SspMI	CTAG	5 cut(s)	1236, 1299, 1421, 1511, 1695
StyD4I	CCNGG	8 cut(s)	253, 305, 411, 432, 552, 1340, 1363, 1689
StyI	CCWWGG	4 cut(s)	528, 714, 1169, 1257
TaaI	ACNGT	4 cut(s)	120, 894, 1012, 1182
TaiI	ACGT	2 cut(s)	785, 1856
TaqI	TCGA	3 cut(s)	68, 339, 1067
TaqII	GACCGA	2 cut(s)	443, 1449
TatI	WGTACW	1 cut(s)	1890
TauI	GCSGC	9 cut(s)	31, 145, 213, 245, 508, 694, 857, 1054, 1862
TfiI	GAWTC	4 cut(s)	1129, 1165, 1336, 1439
Tru1I	TTAA	4 cut(s)	630, 1031, 1503, 1659
Tru9I	TTAA	4 cut(s)	630, 1031, 1503, 1659
TscAI	CASTG	2 cut(s)	897, 1759
TseFI	GTSAC	4 cut(s)	888, 1176, 1754, 1825
TseI	GCWGC	3 cut(s)	25, 1232, 1583
Tsp45I	GTSAC	4 cut(s)	888, 1176, 1754, 1825
TspGWI	ACGGA	1 cut(s)	290
TspRI	CASTG	2 cut(s)	897, 1759
Tth111I	GACNNNGTC	1 cut(s)	13
VpaK11BI	GGWCC	3 cut(s)	450, 976, 1182
XapI	RAATTY	3 cut(s)	824, 1266, 1614
XcmI	CCANNNNNNNNNTGG	2 cut(s)	970, 1321
XmnI	GAANNNNTTC	3 cut(s)	80, 1359, 1443
XspI	CTAG	5 cut(s)	1236, 1299, 1421, 1511, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.