Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003802

Physical Location & Seq

Genomic Coordinates Forward (+)

15256438 .. 15259646

Gene Structure 3209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0182900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGATAAAAGAAAAACTTCTCCATATTTTCTTGATACTCATCTTATTGATATCCATGAAGTCTTACCAGAAGAAGAGGAACAAGAAGAGGGAATTACTGAAGAGGAAAACGGAAAGGCAGAGAAGAGACTTAACAAACCCATTAAAGTTAGAGAGATGAAGGGTAGTAGTCAAAGGCGTTCGATCAATAGGCAGGTTTCTCTAGAGACTGGTTTTTCGGTGCTTCGAAAAGAGTCCAACAGGGCTAAAGATGAGAACATTGGTGTTAATCTTCCCAGAAGTGGAAGAAGTTTCGGAGGTTTTGATTCCATTAACAGGTTTGGCATGGAAGGAAGGAAAGGAGACTTCAGCATCTTCGAGACCAAATCATCAAACCCCAGTAGGCAAAACTCTTGGTTGCCATCAAAAAAGGAAAGATCAGAGATGGAGTCTCAGAAGACTGATGGAGCAGGACTTGATGAGTCTGTTGATACAAGTGTTCCTGCTGGCAGATACTTTGCTGCACTTAGAGGGCCTGAACTTGACCAAGTCAAGGATGATGAAGATATTCTCCTCCCAAAAGATGAGCAATGGCCCTTTCTCCTCAGATTTCCAATTGGATGCTTTGGTATTTGTCTTGGCCTTAGCAGCCAAGCAGTCTTATGGCGTGCTCTTGCGACAAGCCCAGCCACTGAGTTTCTCCACATCCCACTCTTCATAAACCTTGTCCTCTGGCTTTTAGCATTAGCAGTCCTATTTTGTGTCTCCTTCACCTATATTCTCAAAACTCTCTTCTACTTTGAAGCAGTCAAAAGAGAGTACTTCCACCCTGTGAGAGTCAACTTCTTCTTTGCTCCTTGGGTTGTATGCATGTTCTTAGCCCTTGGTGCACCACCAACTTTGTTCCCTAATAAACTCCAACCTGCAATTTGGTGCACCTTCATGTTACCCTACTTTCTTCTGGAACTCAAGATCTATGGACAGTGGCTTTCGGGTGGGAAGAGGCGTCTTTGTAAGGTGGCCAATCCATCTTCGCATCTCTCAGTGGTTGGAAACTTTGTTGGGGCAATTTTGGCTGCCAAGGTTGGGTGGAAGGAGCCTGCCAAGTTCTTGTGGGCAGTAGGCTTTGCACATTACTTTGTGGTCTTTGTTACTTTGTATCAGAGATTGCCAACAAGTGAAGCGTTGCCGAGGGAGCTCCATCCGGTGTATTCCATGTTCATTGCTGCCCCATCAGCCGCAAGTATGGCTTGGCAGAACATTTATGGTGATTTCAATGAGGTGTCGAGGACCTGCTACTTCATCGCACTGTTTCTCTATATTTCACTGGTCGTGAGGATCAAATTCTTCACAGGGTTTAGATTTTCGGTGGCTTGGTGGGCATACACCTTTCCAATGACAACATTCTCAGTTGCCACCATTAAGTATGCAGAAGAAGTACCGTCAGTTCTAACCAAGGGCCTCGCAGTTACTCTTTCTTTCATGTCATCAACAACGGTGTCTGTACTGTTTGTGTCCACTCTTCTTCATGCCTTTGTTTGGCACACATTGTTTCCTAATGATCTTGCCATAGCCATAACAAAGAGAAGACTTGGCAAGTTCAAAAAGGCCTATGATATAAAGCGCTGGACAAAGCAGGCTCTAACCAAGAACAATATAGCAGCAAAGGTTTCTGATGGAGGGAAAGAAGACAGATTATATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000050 GO:0003674 GO:0003824 GO:0004087 GO:0004088 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005951 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016053 GO:0016874 GO:0016879 GO:0016884 GO:0019627 GO:0019752 GO:0031667 GO:0031668 GO:0031669 GO:0032991 GO:0033554 GO:0034641 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050896 GO:0051716 GO:0071496 GO:0071704 GO:0071941 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00240 ko00250 ko01100 map00240 map00250 map01100

Pfam Domains

Protein Families

CPSase_L_D2 CPSase_L_D3 MGS

Protein Analysis

561

Amino Acids

63.8

Weight (kDa)

9.27

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SLAC1	PF03595	196 - 501	3.2e-45	Voltage-dependent anion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29900
fragaria_vesca	FvH4_1g25660 FvH4_1g25660
malus_domestica	MD03G1111400.v1.1 MD11G1125100.v1.1 MD12G1166200.v1.1
prunus_persica	Prupe.6G093800_v2.0.a1
pyrus_communis	pycom11g10560 pycom11g10570
rosa_chinensis	RchiOBHm_Chr2g0124141 RchiOBHm_Chr7g0219181
rosa_laevigata	RLG00000002304 RLG00000018786
rosa_multiflora	Rmu_co8484899.1_g000001 Rmu_sc0003840.1_g000003 Rmu_sc0008812.1_g000002 Rmu_sc0009785.1_g000029
rosa_roxburghii	Rroxscaffold_2G00120100 Rroxscaffold_3G00240170
rosa_rugosa	Rorug02G0248800 Rorug07G0182900 Rorug07G0183000 Rorug07G0183000
rosa_samantha	Rh2AG307800 Rh2BG316800 Rh2CG294600 Rh2DG331600 Rh2DG331800 Rh7AG326600 Rh7BG316400 Rh7CG343900 Rh7DG321900
rosa_wichuraiana	Rw2G024810 Rw7G027510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	184, 910, 1280
AciI	CCGC	1 cut(s)	1218
AclWI	GGATC	1 cut(s)	1325
AcoI	YGGCCR	1 cut(s)	999
AcsI	RAATTY	1 cut(s)	1322
AcuI	CTGAAG	2 cut(s)	120, 331
AcyI	GRCGYC	1 cut(s)	985
AdeI	CACNNNGTG	1 cut(s)	811
AfaI	GTAC	3 cut(s)	800, 1419, 1485
AfeI	AGCGCT	1 cut(s)	1604
AfiI	CCNNNNNNNGG	5 cut(s)	281, 315, 532, 1065, 1518
AgsI	TTSAA	3 cut(s)	782, 1255, 1582
AluBI	AGCT	1 cut(s)	1177
AluI	AGCT	1 cut(s)	1177
Alw21I	GWGCWC	4 cut(s)	652, 871, 917, 1179
Alw26I	GTCTC	6 cut(s)	121, 200, 336, 353, 435, 748
Alw44I	GTGCAC	2 cut(s)	867, 913
AlwI	GGATC	1 cut(s)	1325
AlwNI	CAGNNNCTG	1 cut(s)	671
Aor51HI	AGCGCT	1 cut(s)	1604
AoxI	GGCC	6 cut(s)	512, 572, 619, 999, 1438, 1587
ApaLI	GTGCAC	2 cut(s)	867, 913
ApeKI	GCWGC	5 cut(s)	500, 627, 1055, 1205, 1640
ApoI	RAATTY	1 cut(s)	1322
ArsI	GACNNNNNNTTYG	2 cut(s)	199, 231
Asp700I	GAANNNNTTC	2 cut(s)	16, 546
AspLEI	GCGC	1 cut(s)	1605
AspS9I	GGNCC	4 cut(s)	512, 573, 1269, 1438
AsuHPI	GGTGA	2 cut(s)	742, 1259
AsuII	TTCGAA	1 cut(s)	226
AvaII	GGWCC	1 cut(s)	1269
BaeGI	GKGCMC	2 cut(s)	871, 917
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BalI	TGGCCA	1 cut(s)	1001
BanII	GRGCYC	1 cut(s)	1179
BbsI	GAAGAC	3 cut(s)	443, 1573, 1674
Bbv12I	GWGCWC	4 cut(s)	652, 871, 917, 1179
BbvI	GCAGC	5 cut(s)	487, 639, 1042, 1192, 1652
BccI	CCATC	7 cut(s)	409, 418, 437, 1015, 1188, 1219, 1649
BcoDI	GTCTC	6 cut(s)	121, 200, 336, 353, 435, 748
BfaI	CTAG	1 cut(s)	203
BfoI	RGCGCY	1 cut(s)	1606
BfuAI	ACCTGC	3 cut(s)	184, 910, 1280
BglII	AGATCT	1 cut(s)	951
BisI	GCNGC	6 cut(s)	501, 628, 1056, 1206, 1218, 1641
BlsI	GCNGC	6 cut(s)	502, 629, 1057, 1207, 1219, 1642
BmcAI	AGTACT	1 cut(s)	800
Bme18I	GGWCC	1 cut(s)	1269
BmgT120I	GGNCC	4 cut(s)	512, 573, 1269, 1438
BmiI	GGNNCC	1 cut(s)	1077
BmrI	ACTGGG	1 cut(s)	372
BmsI	GCATC	3 cut(s)	360, 590, 1024
BmuI	ACTGGG	1 cut(s)	372
BpiI	GAAGAC	3 cut(s)	443, 1573, 1674
Bpu10I	CCTNAGC	1 cut(s)	623
Bpu14I	TTCGAA	1 cut(s)	226
BpuEI	CTTGAG	1 cut(s)	932
BsaBI	GATNNNNATC	1 cut(s)	39
BsaHI	GRCGYC	1 cut(s)	985
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	5 cut(s)	836, 862, 1059, 1169, 1434
BsaWI	WCCGGW	1 cut(s)	1183
Bsc4I	CCNNNNNNNGG	5 cut(s)	281, 315, 532, 1065, 1518
Bse1I	ACTGG	3 cut(s)	214, 378, 1311
Bse3DI	GCAATG	2 cut(s)	575, 1200
Bse8I	GATNNNNATC	1 cut(s)	39
BseDI	CCNNGG	5 cut(s)	836, 862, 1059, 1169, 1434
BseGI	GGATG	4 cut(s)	541, 605, 684, 1180
BseJI	GATNNNNATC	1 cut(s)	39
BseLI	CCNNNNNNNGG	5 cut(s)	281, 315, 532, 1065, 1518
BseMI	GCAATG	2 cut(s)	575, 1200
BseMII	CTCAG	5 cut(s)	446, 598, 663, 1035, 1401
BseNI	ACTGG	3 cut(s)	214, 378, 1311
BseRI	GAGGAG	2 cut(s)	542, 572
BseSI	GKGCMC	2 cut(s)	871, 917
BseXI	GCAGC	5 cut(s)	487, 639, 1042, 1192, 1652
BseYI	CCCAGC	1 cut(s)	664
BsgI	GTGCAG	1 cut(s)	486
BshFI	GGCC	6 cut(s)	514, 574, 621, 1001, 1440, 1589
BsiHKAI	GWGCWC	4 cut(s)	652, 871, 917, 1179
BsiSI	CCGG	1 cut(s)	1184
BslI	CCNNNNNNNGG	5 cut(s)	281, 315, 532, 1065, 1518
BsmAI	GTCTC	6 cut(s)	121, 200, 336, 353, 435, 748
BsnI	GGCC	6 cut(s)	514, 574, 621, 1001, 1440, 1589
Bso31I	GGTCTC	1 cut(s)	353
Bsp119I	TTCGAA	1 cut(s)	226
Bsp1286I	GDGCHC	4 cut(s)	652, 871, 917, 1179
Bsp143I	GATC	5 cut(s)	183, 416, 951, 1317, 1540
BspACI	CCGC	1 cut(s)	1218
BspANI	GGCC	6 cut(s)	514, 574, 621, 1001, 1440, 1589
BspCNI	CTCAG	5 cut(s)	445, 597, 664, 1034, 1400
BspLI	GGNNCC	1 cut(s)	1077
BspMI	ACCTGC	3 cut(s)	184, 910, 1280
BspPI	GGATC	1 cut(s)	1325
BspT104I	TTCGAA	1 cut(s)	226
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	2 cut(s)	575, 1200
BsrI	ACTGG	3 cut(s)	214, 378, 1311
BssECI	CCNNGG	5 cut(s)	836, 862, 1059, 1169, 1434
BssMI	GATC	5 cut(s)	183, 416, 951, 1317, 1540
BssNI	GRCGYC	1 cut(s)	985
BssT1I	CCWWGG	4 cut(s)	836, 862, 1059, 1434
Bst4CI	ACNGT	5 cut(s)	963, 1290, 1422, 1477, 1488
Bst6I	CTCTTC	8 cut(s)	69, 81, 96, 119, 698, 776, 974, 1506
BstACI	GRCGYC	1 cut(s)	985
BstBI	TTCGAA	1 cut(s)	226
BstC8I	GCNNGC	4 cut(s)	487, 648, 1080, 1617
BstDEI	CTNAG	8 cut(s)	432, 506, 584, 623, 672, 856, 1021, 1387
BstF5I	GGATG	4 cut(s)	541, 605, 684, 1180
BstH2I	RGCGCY	1 cut(s)	1606
BstHHI	GCGC	1 cut(s)	1605
BstKTI	GATC	5 cut(s)	186, 419, 954, 1320, 1543
BstMAI	GTCTC	6 cut(s)	121, 200, 336, 353, 435, 748
BstMBI	GATC	5 cut(s)	183, 416, 951, 1317, 1540
BstMWI	GCNNNNNNNGC	7 cut(s)	627, 866, 1052, 1174, 1214, 1226, 1358
BstNSI	RCATGY	1 cut(s)	853
BstSLI	GKGCMC	2 cut(s)	871, 917
BstV1I	GCAGC	5 cut(s)	487, 639, 1042, 1192, 1652
BstV2I	GAAGAC	3 cut(s)	443, 1573, 1674
BstX2I	RGATCY	1 cut(s)	951
BstYI	RGATCY	1 cut(s)	951
BsuRI	GGCC	6 cut(s)	514, 574, 621, 1001, 1440, 1589
BtgZI	GCGATG	1 cut(s)	1267
BtsCI	GGATG	4 cut(s)	541, 605, 684, 1180
BtsIMutI	CAGTG	5 cut(s)	669, 968, 1029, 1286, 1304
BveI	ACCTGC	3 cut(s)	184, 910, 1280
Cac8I	GCNNGC	4 cut(s)	487, 648, 1080, 1617
CaiI	CAGNNNCTG	1 cut(s)	671
CfoI	GCGC	1 cut(s)	1605
Cfr13I	GGNCC	4 cut(s)	512, 573, 1269, 1438
CseI	GACGC	1 cut(s)	974
Csp6I	GTAC	3 cut(s)	799, 1418, 1484
CspCI	CAANNNNNGTGG	2 cut(s)	861, 896
CviAII	CATG	7 cut(s)	56, 325, 850, 922, 1195, 1462, 1508
CviQI	GTAC	3 cut(s)	799, 1418, 1484
DdeI	CTNAG	8 cut(s)	432, 506, 584, 623, 672, 856, 1021, 1387
DpnI	GATC	5 cut(s)	185, 418, 953, 1319, 1542
DpnII	GATC	5 cut(s)	183, 416, 951, 1317, 1540
DraIII	CACNNNGTG	1 cut(s)	811
EaeI	YGGCCR	1 cut(s)	999
Eam1104I	CTCTTC	8 cut(s)	69, 81, 96, 119, 698, 776, 974, 1506
EarI	CTCTTC	8 cut(s)	69, 81, 96, 119, 698, 776, 974, 1506
Ecl136II	GAGCTC	1 cut(s)	1177
Eco130I	CCWWGG	4 cut(s)	836, 862, 1059, 1434
Eco147I	AGGCCT	1 cut(s)	1589
Eco24I	GRGCYC	1 cut(s)	1179
Eco31I	GGTCTC	1 cut(s)	353
Eco32I	GATATC	1 cut(s)	52
Eco47I	GGWCC	1 cut(s)	1269
Eco47III	AGCGCT	1 cut(s)	1604
Eco53kI	GAGCTC	1 cut(s)	1177
Eco57I	CTGAAG	2 cut(s)	120, 331
EcoICRI	GAGCTC	1 cut(s)	1177
EcoO109I	RGGNCCY	3 cut(s)	512, 1269, 1438
EcoRV	GATATC	1 cut(s)	52
EcoT14I	CCWWGG	4 cut(s)	836, 862, 1059, 1434
EcoT22I	ATGCAT	1 cut(s)	851
EcoT38I	GRGCYC	1 cut(s)	1179
ErhI	CCWWGG	4 cut(s)	836, 862, 1059, 1434
FaeI	CATG	7 cut(s)	59, 328, 853, 925, 1198, 1465, 1511
FalI	AAGNNNNNCTT	3 cut(s)	33, 1213, 1245
FatI	CATG	7 cut(s)	55, 324, 849, 921, 1194, 1461, 1507
Fnu4HI	GCNGC	6 cut(s)	501, 628, 1056, 1206, 1218, 1641
FokI	GGATG	4 cut(s)	548, 612, 671, 1167
FriOI	GRGCYC	1 cut(s)	1179
Fsp4HI	GCNGC	6 cut(s)	501, 628, 1056, 1206, 1218, 1641
FspBI	CTAG	1 cut(s)	203
GlaI	GCGC	1 cut(s)	1604
GluI	GCNGC	6 cut(s)	501, 628, 1056, 1206, 1218, 1641
GsaI	CCCAGC	1 cut(s)	668
HaeII	RGCGCY	1 cut(s)	1606
HaeIII	GGCC	6 cut(s)	514, 574, 621, 1001, 1440, 1589
HapII	CCGG	1 cut(s)	1184
HgaI	GACGC	1 cut(s)	974
HhaI	GCGC	1 cut(s)	1605
Hin1I	GRCGYC	1 cut(s)	985
Hin1II	CATG	7 cut(s)	59, 328, 853, 925, 1198, 1465, 1511
Hin6I	GCGC	1 cut(s)	1603
HinP1I	GCGC	1 cut(s)	1603
HincII	GTYRAC	1 cut(s)	820
HindII	GTYRAC	1 cut(s)	820
HinfI	GANTC	5 cut(s)	233, 305, 428, 461, 816
HpaII	CCGG	1 cut(s)	1184
HphI	GGTGA	2 cut(s)	742, 1259
Hpy166II	GTNNAC	4 cut(s)	820, 869, 915, 1497
Hpy188I	TCNGA	6 cut(s)	296, 421, 435, 587, 1143, 1654
Hpy188III	TCNNGA	6 cut(s)	32, 203, 358, 941, 949, 1312
Hpy8I	GTNNAC	4 cut(s)	820, 869, 915, 1497
HpyAV	CCTTC	6 cut(s)	154, 323, 327, 757, 928, 1066
HpyCH4III	ACNGT	5 cut(s)	963, 1290, 1422, 1477, 1488
HpyCH4V	TGCA	7 cut(s)	503, 849, 869, 905, 915, 1109, 1409
HpyF10VI	GCNNNNNNNGC	7 cut(s)	627, 866, 1052, 1174, 1214, 1226, 1358
HpyF3I	CTNAG	8 cut(s)	432, 506, 584, 623, 672, 856, 1021, 1387
Hsp92I	GRCGYC	1 cut(s)	985
Hsp92II	CATG	7 cut(s)	59, 328, 853, 925, 1198, 1465, 1511
HspAI	GCGC	1 cut(s)	1603
Kzo9I	GATC	5 cut(s)	183, 416, 951, 1317, 1540
LmnI	GCTCC	5 cut(s)	446, 838, 1075, 1174, 1182
Lsp1109I	GCAGC	5 cut(s)	487, 639, 1042, 1192, 1652
LweI	GCATC	3 cut(s)	360, 590, 1024
MaeI	CTAG	1 cut(s)	203
MaeIII	GTNAC	3 cut(s)	924, 1129, 1447
MalI	GATC	5 cut(s)	185, 418, 953, 1319, 1542
MboI	GATC	5 cut(s)	183, 416, 951, 1317, 1540
MfeI	CAATTG	1 cut(s)	594
MflI	RGATCY	1 cut(s)	951
MhlI	GDGCHC	4 cut(s)	652, 871, 917, 1179
MlsI	TGGCCA	1 cut(s)	1001
MluCI	AATT	5 cut(s)	93, 594, 906, 1047, 1322
MluNI	TGGCCA	1 cut(s)	1001
MlyI	GAGTC	4 cut(s)	242, 437, 470, 825
MmeI	TCCRAC	3 cut(s)	261, 922, 1009
Mox20I	TGGCCA	1 cut(s)	1001
Mph1103I	ATGCAT	1 cut(s)	851
MroXI	GAANNNNTTC	2 cut(s)	16, 546
MscI	TGGCCA	1 cut(s)	1001
MseI	TTAA	5 cut(s)	132, 144, 267, 312, 1401
MslI	CAYNNNNRTG	1 cut(s)	920
Msp20I	TGGCCA	1 cut(s)	1001
MspI	CCGG	1 cut(s)	1184
MunI	CAATTG	1 cut(s)	594
MwoI	GCNNNNNNNGC	7 cut(s)	627, 866, 1052, 1174, 1214, 1226, 1358
NdeII	GATC	5 cut(s)	183, 416, 951, 1317, 1540
NlaIII	CATG	7 cut(s)	59, 328, 853, 925, 1198, 1465, 1511
NlaIV	GGNNCC	1 cut(s)	1077
NmeAIII	GCCGAG	1 cut(s)	1194
NsiI	ATGCAT	1 cut(s)	851
NspI	RCATGY	1 cut(s)	853
NspV	TTCGAA	1 cut(s)	226
PceI	AGGCCT	1 cut(s)	1589
PdmI	GAANNNNTTC	2 cut(s)	16, 546
PfeI	GAWTC	1 cut(s)	305
PflFI	GACNNNGTC	1 cut(s)	527
PkrI	GCNGC	6 cut(s)	502, 629, 1057, 1207, 1219, 1642
PleI	GAGTC	4 cut(s)	241, 436, 469, 824
PpsI	GAGTC	4 cut(s)	241, 436, 469, 824
PpuMI	RGGWCCY	1 cut(s)	1269
Psp124BI	GAGCTC	1 cut(s)	1179
Psp5II	RGGWCCY	1 cut(s)	1269
PspFI	CCCAGC	1 cut(s)	664
PspN4I	GGNNCC	1 cut(s)	1077
PspPI	GGNCC	4 cut(s)	512, 573, 1269, 1438
PspPPI	RGGWCCY	1 cut(s)	1269
PsrI	GAACNNNNNNTAC	4 cut(s)	1181, 1213, 1410, 1442
PstNI	CAGNNNCTG	1 cut(s)	671
PsuI	RGATCY	1 cut(s)	951
PsyI	GACNNNGTC	1 cut(s)	527
RsaI	GTAC	3 cut(s)	800, 1419, 1485
RsaNI	GTAC	3 cut(s)	799, 1418, 1484
RseI	CAYNNNNRTG	1 cut(s)	920
SacI	GAGCTC	1 cut(s)	1179
SaqAI	TTAA	5 cut(s)	132, 144, 267, 312, 1401
SatI	GCNGC	6 cut(s)	501, 628, 1056, 1206, 1218, 1641
Sau3AI	GATC	5 cut(s)	183, 416, 951, 1317, 1540
Sau96I	GGNCC	4 cut(s)	512, 573, 1269, 1438
ScaI	AGTACT	1 cut(s)	800
SchI	GAGTC	4 cut(s)	242, 437, 470, 825
SduI	GDGCHC	4 cut(s)	652, 871, 917, 1179
SfaNI	GCATC	3 cut(s)	360, 590, 1024
SfuI	TTCGAA	1 cut(s)	226
SinI	GGWCC	1 cut(s)	1269
SmiMI	CAYNNNNRTG	1 cut(s)	920
SmlI	CTYRAG	1 cut(s)	947
SmoI	CTYRAG	1 cut(s)	947
Sse9I	AATT	5 cut(s)	93, 594, 906, 1047, 1322
SseBI	AGGCCT	1 cut(s)	1589
SsiI	CCGC	1 cut(s)	1218
SspMI	CTAG	1 cut(s)	203
SstI	GAGCTC	1 cut(s)	1179
StuI	AGGCCT	1 cut(s)	1589
StyI	CCWWGG	4 cut(s)	836, 862, 1059, 1434
TaaI	ACNGT	5 cut(s)	963, 1290, 1422, 1477, 1488
TaqI	TCGA	4 cut(s)	182, 226, 357, 1265
TasI	AATT	5 cut(s)	93, 594, 906, 1047, 1322
TatI	WGTACW	2 cut(s)	798, 1483
TauI	GCSGC	1 cut(s)	1220
TfiI	GAWTC	1 cut(s)	305
Tru1I	TTAA	5 cut(s)	132, 144, 267, 312, 1401
Tru9I	TTAA	5 cut(s)	132, 144, 267, 312, 1401
TscAI	CASTG	5 cut(s)	676, 968, 1029, 1293, 1311
TseI	GCWGC	5 cut(s)	500, 627, 1055, 1205, 1640
TspDTI	ATGAA	9 cut(s)	72, 173, 555, 685, 910, 1189, 1270, 1450, 1496
TspGWI	ACGGA	1 cut(s)	126
TspRI	CASTG	5 cut(s)	676, 968, 1029, 1293, 1311
Tth111I	GACNNNGTC	1 cut(s)	527
VneI	GTGCAC	2 cut(s)	867, 913
VpaK11BI	GGWCC	1 cut(s)	1269
XapI	RAATTY	1 cut(s)	1322
XbaI	TCTAGA	1 cut(s)	202
XceI	RCATGY	1 cut(s)	853
XmnI	GAANNNNTTC	2 cut(s)	16, 546
XspI	CTAG	1 cut(s)	203
ZrmI	AGTACT	1 cut(s)	800
Zsp2I	ATGCAT	1 cut(s)	851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.